Cmc11g0295431 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0295431
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	patellin-1-like
Location	CMiso1.1chr11: 12870836 .. 12871942 (+)
RNA-Seq Expression	Cmc11g0295431
Synteny	Cmc11g0295431

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATCTTTTACACACTGCCACTCCATTCTCTCTTCTCTGTCCTATAAAATCCACTCTGCTTCATCATTCTTCCATCCCATCCTTTCTTTCTCTTCTTCAATTCCTTCTCCTTTCCACAAGGATTTTAGCATGGCTACTGCTGAGGTAAATTTGGCTTCCGACAATCAAGCTTAAACTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTAAATAATCATAATTCAGAATCATATAACTATCTTTCTCGATACATTTGAATTTCTTTTATATATGGATATGTGAAATTCTTTTGAAATATTTTGAACAAATTTGGAACTGAGTCATTGTTCTTTCCAGGTTGTAACACCGGACACAGCTGTCCCAGAGGAAGCTACAGAGGTGGTGGAGGTGGAGGTACCAGCGCCCAAGGTTGAAGAAGAAGAAGCTCCGCCTCCGGTGGAAGCAGATCCTCCAGCGGAGGAGGTGGCAAAAGAAGAAGACGTCACGGATCCACCAGCGCTGGAAGAGACAGAAACACCGGTTGAATTTGAAACCAAGGAAGTAGTTGTAGAAGAAGAGTCGAAGGAAGAGAAGAATGAAGAAGAAGTAGTGGAAGAAGAAGAAAAGGAAGAGAAGAAAACAGAAGAAGCAGCTGAGGGTGCGGTTTTGGAGGAGACAAAGGCATCGGAGGCCGAGACACCGGTGGAGGAGGAGGAGGAGGAGAAGGCCGTGGAAGTGGTGGAAGAGAAGCCTGTAGAAGAAACAGAAGAGAAGCCAGAAGAAGAGGTTGAAGCAGAAAAGGCTGAGTAATTAAAACAGGATTACATATTATTGAGTGATGAAAAAAGTGAATGGAGGGTAGTTTGAGAAATTTGGTGTCTTTAAATTGTAGAGAGTTTGATTTTGTGTAATGTGAAAAGTGGTTGATTGAATGGGGATTGGGATGGAAGTGTAATAAAGCTATAAAAGGAGTATAGGGATTAGGGAACTTTGTATTTCTGTATCTTGGATGTCTGTTTCACAGTTGCAATTTGTTTTTGCTAGTTTGTTTGTTATAACAACTTACAAGTTATAATATATATATATATATATATATATATATGTGTGTGTGTGTG

mRNA sequence

TCATCTTTTACACACTGCCACTCCATTCTCTCTTCTCTGTCCTATAAAATCCACTCTGCTTCATCATTCTTCCATCCCATCCTTTCTTTCTCTTCTTCAATTCCTTCTCCTTTCCACAAGGATTTTAGCATGGCTACTGCTGAGGTTGTAACACCGGACACAGCTGTCCCAGAGGAAGCTACAGAGGTGGTGGAGGTGGAGGTACCAGCGCCCAAGGTTGAAGAAGAAGAAGCTCCGCCTCCGGTGGAAGCAGATCCTCCAGCGGAGGAGGTGGCAAAAGAAGAAGACGTCACGGATCCACCAGCGCTGGAAGAGACAGAAACACCGGTTGAATTTGAAACCAAGGAAGTAGTTGTAGAAGAAGAGTCGAAGGAAGAGAAGAATGAAGAAGAAGTAGTGGAAGAAGAAGAAAAGGAAGAGAAGAAAACAGAAGAAGCAGCTGAGGGTGCGGTTTTGGAGGAGACAAAGGCATCGGAGGCCGAGACACCGGTGGAGGAGGAGGAGGAGGAGAAGGCCGTGGAAGTGGTGGAAGAGAAGCCTGTAGAAGAAACAGAAGAGAAGCCAGAAGAAGAGGTTGAAGCAGAAAAGGCTGAGTAATTAAAACAGGATTACATATTATTGAGTGATGAAAAAAGTGAATGGAGGGTAGTTTGAGAAATTTGGTGTCTTTAAATTGTAGAGAGTTTGATTTTGTGTAATGTGAAAAGTGGTTGATTGAATGGGGATTGGGATGGAAGTGTAATAAAGCTATAAAAGGAGTATAGGGATTAGGGAACTTTGTATTTCTGTATCTTGGATGTCTGTTTCACAGTTGCAATTTGTTTTTGCTAGTTTGTTTGTTATAACAACTTACAAGTTATAATATATATATATATATATATATATATATGTGTGTGTGTGTG

Coding sequence (CDS)

ATGGCTACTGCTGAGGTTGTAACACCGGACACAGCTGTCCCAGAGGAAGCTACAGAGGTGGTGGAGGTGGAGGTACCAGCGCCCAAGGTTGAAGAAGAAGAAGCTCCGCCTCCGGTGGAAGCAGATCCTCCAGCGGAGGAGGTGGCAAAAGAAGAAGACGTCACGGATCCACCAGCGCTGGAAGAGACAGAAACACCGGTTGAATTTGAAACCAAGGAAGTAGTTGTAGAAGAAGAGTCGAAGGAAGAGAAGAATGAAGAAGAAGTAGTGGAAGAAGAAGAAAAGGAAGAGAAGAAAACAGAAGAAGCAGCTGAGGGTGCGGTTTTGGAGGAGACAAAGGCATCGGAGGCCGAGACACCGGTGGAGGAGGAGGAGGAGGAGAAGGCCGTGGAAGTGGTGGAAGAGAAGCCTGTAGAAGAAACAGAAGAGAAGCCAGAAGAAGAGGTTGAAGCAGAAAAGGCTGAGTAA

Protein sequence

MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPALEETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETPVEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE

Homology

[Close]

BLAST of Cmc11g0295431 vs. NCBI nr
Match: XP_008455963.1 (PREDICTED: patellin-1-like [Cucumis melo])

HSP 1 Score: 231.5 bits (589), Expect = 5.0e-57
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL
Sbjct: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60

Query: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120
           EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP
Sbjct: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120

Query: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 156
           VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE
Sbjct: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155

[Close]

BLAST of Cmc11g0295431 vs. NCBI nr
Match: KAA0053292.1 (patellin-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 231.5 bits (589), Expect = 5.0e-57
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL
Sbjct: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60

Query: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120
           EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP
Sbjct: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120

Query: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 156
           VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE
Sbjct: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155

[Close]

BLAST of Cmc11g0295431 vs. NCBI nr
Match: XP_004140479.1 (cilia- and flagella-associated protein 251 [Cucumis sativus] >KGN46583.1 hypothetical protein Csa_004785 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 1.7e-36
Identity = 128/156 (82.05%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVTP+TA+PEEATEVVEVEVP PKVEEEEAPPPVE DPPAEEVAKEEDVTDPPA+
Sbjct: 1   MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV 60

Query: 61  EETETPVEFETKEVVVEEESKEEKN-EEEVVEEEEKEEKKTEEAAEGAVLEETKASEAET 120
           EE ETPVE ETKEVVVEEE+KEEKN EEEVVEEEEKEE KTEEAAE  V EETKA     
Sbjct: 61  EEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETKA----- 120

Query: 121 PVEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 156
           PV EE EEKAVEV   KP EE EEK EEEV AEK E
Sbjct: 121 PV-EEAEEKAVEV---KPAEEAEEKAEEEVGAEKVE 147

[Close]

BLAST of Cmc11g0295431 vs. NCBI nr
Match: XP_038900947.1 (cytochrome c1-like [Benincasa hispida] >XP_038900949.1 cytochrome c1-like [Benincasa hispida])

HSP 1 Score: 145.2 bits (365), Expect = 4.7e-31
Identity = 113/155 (72.90%), Postives = 119/155 (76.77%), Query Frame = 0


Query: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVV P+T +PEEATEV  VEVP PKVEEEEAPPP   DPPAEEVAKEE+ TDPPA 
Sbjct: 1   MATAEVVPPETVLPEEATEV--VEVPPPKVEEEEAPPPAAVDPPAEEVAKEEEATDPPAA 60

Query: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120
           EETETPVE ETKEVVVEEE KEEK E         EE+K EEA E  V EE+K +EAE P
Sbjct: 61  EETETPVEVETKEVVVEEEPKEEKKE---------EEEKEEEAGEAVVEEESKPAEAEAP 120

Query: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 156
            EEE    AVEVVEEKPVEETEEKPEEE  AEKAE
Sbjct: 121 AEEE----AVEVVEEKPVEETEEKPEEEPAAEKAE 140

[Close]

BLAST of Cmc11g0295431 vs. NCBI nr
Match: KAG6604898.1 (hypothetical protein SDJN03_02215, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 58.5 bits (140), Expect = 5.8e-05
Identity = 89/170 (52.35%), Postives = 100/170 (58.82%), Query Frame = 0


Query: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVT + A+ EE T   EV+VP  KVEEE    P   DPPAEE+AKEE      A 
Sbjct: 1   MATAEVVTQEAALQEEVT---EVQVPPLKVEEE---APAAVDPPAEELAKEE------AA 60

Query: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEE-----------EEKEEKKTEE---AAEG 120
           E  E PVE ETKEVV EEE +EE+ +EEVVEE           EEKEE   E     A  
Sbjct: 61  EVAEPPVEVETKEVVAEEEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEAPAESEPAVAAA 120

Query: 121 AVLEETKASEAETPVEEEEEEKAVEVVEEKPVEETEEKP-EEEVEAEKAE 156
           A  EE +  EA+   E   EE+AVE V+E   EE EEKP EEE  AEKAE
Sbjct: 121 AEEEEEEEEEAKPEAEPAAEEEAVE-VKETAAEEAEEKPAEEEPAAEKAE 157

[Close]

BLAST of Cmc11g0295431 vs. ExPASy TrEMBL
Match: A0A5A7UC23 (Patellin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001030 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.4e-57
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL
Sbjct: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60

Query: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120
           EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP
Sbjct: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120

Query: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 156
           VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE
Sbjct: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155

[Close]

BLAST of Cmc11g0295431 vs. ExPASy TrEMBL
Match: A0A1S3C239 (patellin-1-like OS=Cucumis melo OX=3656 GN=LOC103496027 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.4e-57
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL
Sbjct: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60

Query: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120
           EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP
Sbjct: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEEEEKEEKKTEEAAEGAVLEETKASEAETP 120

Query: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 156
           VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE
Sbjct: 121 VEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155

[Close]

BLAST of Cmc11g0295431 vs. ExPASy TrEMBL
Match: A0A0A0KAS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109780 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 8.0e-37
Identity = 128/156 (82.05%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVTP+TA+PEEATEVVEVEVP PKVEEEEAPPPVE DPPAEEVAKEEDVTDPPA+
Sbjct: 1   MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV 60

Query: 61  EETETPVEFETKEVVVEEESKEEKN-EEEVVEEEEKEEKKTEEAAEGAVLEETKASEAET 120
           EE ETPVE ETKEVVVEEE+KEEKN EEEVVEEEEKEE KTEEAAE  V EETKA     
Sbjct: 61  EEAETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVEEETKA----- 120

Query: 121 PVEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 156
           PV EE EEKAVEV   KP EE EEK EEEV AEK E
Sbjct: 121 PV-EEAEEKAVEV---KPAEEAEEKAEEEVGAEKVE 147

[Close]

BLAST of Cmc11g0295431 vs. ExPASy TrEMBL
Match: A0A6J1I4V1 (fibrous sheath CABYR-binding protein-like OS=Cucurbita maxima OX=3661 GN=LOC111469887 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.8e-04
Identity = 89/167 (53.29%), Postives = 98/167 (58.68%), Query Frame = 0


Query: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVT + A+ EE T   EVEVP  KVEEE    P  ADPPAEEVAKEE      A 
Sbjct: 1   MATAEVVTQEPALQEEVT---EVEVPPLKVEEE---APAAADPPAEEVAKEE------AA 60

Query: 61  EETETPVEFETKEVVVEEESKEEKNEEEVVEE-----------EEKEEKKTEEAAEGAVL 120
           E  E PVE ETKEVV +EE  EE+ +EEVVEE           EEKEE   E     A  
Sbjct: 61  EVAEPPVEVETKEVVAKEE--EEEAKEEVVEEKKEVEAAEVEAEEKEEAPAESEPAVAEE 120

Query: 121 EETKASEAETPVEEEEEEKAVEVVEEKPVEETEEKP-EEEVEAEKAE 156
           EE +  EA+   E   EE+A E V+E   EE EEKP EEE  AEKAE
Sbjct: 121 EEEEEEEAKPEAEPAAEEEAAE-VKETGAEEAEEKPAEEEPAAEKAE 152

The following BLAST results are available for this feature:

BLAST of Cmc11g0295431 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455963.1	5.0e-57	100.00	PREDICTED: patellin-1-like [Cucumis melo]	[more]
KAA0053292.1	5.0e-57	100.00	patellin-1-like [Cucumis melo var. makuwa]	[more]
XP_004140479.1	1.7e-36	82.05	cilia- and flagella-associated protein 251 [Cucumis sativus] >KGN46583.1 hypothe...	[more]
XP_038900947.1	4.7e-31	72.90	cytochrome c1-like [Benincasa hispida] >XP_038900949.1 cytochrome c1-like [Benin...	[more]
KAG6604898.1	5.8e-05	52.35	hypothetical protein SDJN03_02215, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cmc11g0295431 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc11g0295431 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UC23	2.4e-57	100.00	Patellin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G0010...	[more]
A0A1S3C239	2.4e-57	100.00	patellin-1-like OS=Cucumis melo OX=3656 GN=LOC103496027 PE=4 SV=1	[more]
A0A0A0KAS3	8.0e-37	82.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109780 PE=4 SV=1	[more]
A0A6J1I4V1	1.8e-04	53.29	fibrous sheath CABYR-binding protein-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Cmc11g0295431 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 75..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0295431.1	Cmc11g0295431.1	mRNA