Cmc11g0295211 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0295211
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
LocationCMiso1.1chr11: 12420872 .. 12422203 (-)
RNA-Seq ExpressionCmc11g0295211
SyntenyCmc11g0295211
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCCAGCAGAATTGAAAGAGCTGAAAGTGCAGTTACAGGAGTTACTTGATAAAGGCTTCATTCGACCGAGTGTGTCACCTTATGGTGGACCAATTTTATTTGTTAAGAAGAAGGATGGATCGATGCGCCTATGTATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAAATATCCTTTGCCCAGGATCGACGATCTGTTTGACCAGTTAAAGGGAGCTACAGTGTTCTCTAAGATCGACCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATAGCCATGTACCGAAGACGGCTTTTCGTTCCAGATATGGGCACTATGAGTTTATTGTAATGTCGTTTGGTTTGACGAACGCTCCGGCAGTGTTCATGGATTTGATGAACAGAGTGTTTAGAGAGTTCCTAGACACTTTTGTGATCGTGTTTATTGATGATATTTTGATATATTCCAAGACAGAGGTCGAGCATGAGGAGCATTTACGCGTGGTTTTAGAAACCTTTCAATCTAATAAATTGTACGCAAAGTTCTCGAAATGTGAGTTTTGGTTGAAGCAGGTATCCTTTCTAGGCCATGTGGTTTCTAAGGCTAGAGTTTCTGTGGATCCAGCTAAGATAGAGGCAGTCACTGGTCGGCCCCGACCTTCCACGGTCAGTGAGGTTCGTAGCTTTTTGGGTTTAGCAAGTTATTATCGACAGTTTGTGGAGAACTTTTCTCGTATAGCCACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCCTGTGAGGACAGTTTTCATAACCTTAAACAGAAGCTAGTTACTGCACCGGTTCTTACTGTACCTGATGGTTCAGGGAGTTTTATGATTTACAGTGATGCTTCTAAGAAAGGTTTGGGTTGTGTATTGATGCAGCATGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACATGATTTAGAGTTGGCAGCAGTAGTTTTTGCACTGAAGATATGGAGGCATTACTTGTATGGTGAAAAGATACAGAGCTTCACGGATCATAAGAGCTTGAAATACTTCTTCACTCCGAAGGAATTGAATATGAGACAGCGTAGATGGCTTGAACTAGTGAAGGATTACGATTGTGAGATATTGTATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAACAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATTTTGAGAGGGCTGAGATTGCAGTGTCAGTAGGGGCAGTCACTTTGCAGTTAGCCCAATTAACGGTGTAG

mRNA sequence

ATGGCCCCAGCAGAATTGAAAGAGCTGAAAGTGCAGTTACAGGAGTTACTTGATAAAGGCTTCATTCGACCGAGTGTGTCACCTTATGGTGGACCAATTTTATTTGTTAAGAAGAAGGATGGATCGATGCGCCTATGTATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAAATATCCTTTGCCCAGGATCGACGATCTGTTTGACCAGTTAAAGGGAGCTACAGTGTTCTCTAAGATCGACCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATAGCCATGTACCGAAGACGGCTTTTCGTTCCAGATATGGGCACTATGAGTTTATTGTAATGTCGTTTGGTTTGACGAACGCTCCGGCAGTGTTCATGGATTTGATGAACAGAGTGTTTAGAGAGTTCCTAGACACTTTTGTGATCGTGTTTATTGATGATATTTTGATATATTCCAAGACAGAGGTCGAGCATGAGGAGCATTTACGCGTGGTTTTAGAAACCTTTCAATCTAATAAATTGTACGCAAAGTTCTCGAAATGTGAGTTTTGGTTGAAGCAGGTATCCTTTCTAGGCCATGTGGTTTCTAAGGCTAGAGTTTCTGTGGATCCAGCTAAGATAGAGGCAGTCACTGGTCGGCCCCGACCTTCCACGGTCAGTGAGGTTCGTAGCTTTTTGGGTTTAGCAAGTTATTATCGACAGTTTGTGGAGAACTTTTCTCGTATAGCCACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCCTGTGAGGACAGTTTTCATAACCTTAAACAGAAGCTAGTTACTGCACCGGTTCTTACTGTACCTGATGGTTCAGGGAGTTTTATGATTTACAGTGATGCTTCTAAGAAAGGTTTGGGTTGTGTATTGATGCAGCATGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACATGATTTAGAGTTGGCAGCAGTAGTTTTTGCACTGAAGATATGGAGGCATTACTTGTATGGTGAAAAGATACAGAGCTTCACGGATCATAAGAGCTTGAAATACTTCTTCACTCCGAAGGAATTGAATATGAGACAGCGTAGATGGCTTGAACTAGTGAAGGATTACGATTGTGAGATATTGTATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAACAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATTTTGAGAGGGCTGAGATTGCAGTGTCAGTAGGGGCAGTCACTTTGCAGTTAGCCCAATTAACGGTGTAG

Coding sequence (CDS)

ATGGCCCCAGCAGAATTGAAAGAGCTGAAAGTGCAGTTACAGGAGTTACTTGATAAAGGCTTCATTCGACCGAGTGTGTCACCTTATGGTGGACCAATTTTATTTGTTAAGAAGAAGGATGGATCGATGCGCCTATGTATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAAATATCCTTTGCCCAGGATCGACGATCTGTTTGACCAGTTAAAGGGAGCTACAGTGTTCTCTAAGATCGACCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATAGCCATGTACCGAAGACGGCTTTTCGTTCCAGATATGGGCACTATGAGTTTATTGTAATGTCGTTTGGTTTGACGAACGCTCCGGCAGTGTTCATGGATTTGATGAACAGAGTGTTTAGAGAGTTCCTAGACACTTTTGTGATCGTGTTTATTGATGATATTTTGATATATTCCAAGACAGAGGTCGAGCATGAGGAGCATTTACGCGTGGTTTTAGAAACCTTTCAATCTAATAAATTGTACGCAAAGTTCTCGAAATGTGAGTTTTGGTTGAAGCAGGTATCCTTTCTAGGCCATGTGGTTTCTAAGGCTAGAGTTTCTGTGGATCCAGCTAAGATAGAGGCAGTCACTGGTCGGCCCCGACCTTCCACGGTCAGTGAGGTTCGTAGCTTTTTGGGTTTAGCAAGTTATTATCGACAGTTTGTGGAGAACTTTTCTCGTATAGCCACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCCTGTGAGGACAGTTTTCATAACCTTAAACAGAAGCTAGTTACTGCACCGGTTCTTACTGTACCTGATGGTTCAGGGAGTTTTATGATTTACAGTGATGCTTCTAAGAAAGGTTTGGGTTGTGTATTGATGCAGCATGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACATGATTTAGAGTTGGCAGCAGTAGTTTTTGCACTGAAGATATGGAGGCATTACTTGTATGGTGAAAAGATACAGAGCTTCACGGATCATAAGAGCTTGAAATACTTCTTCACTCCGAAGGAATTGAATATGAGACAGCGTAGATGGCTTGAACTAGTGAAGGATTACGATTGTGAGATATTGTATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAACAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATTTTGAGAGGGCTGAGATTGCAGTGTCAGTAGGGGCAGTCACTTTGCAGTTAGCCCAATTAACGGTGTAG

Protein sequence

MAPAELKELKVQLQELLDKGFIRPSVSPYGGPILFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKDSHVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRVVLETFQSNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGRPRPSTVSEVRSFLGLASYYRQFVENFSRIATPLTQLTRKGAPFVWSKACEDSFHNLKQKLVTAPVLTVPDGSGSFMIYSDASKKGLGCVLMQHGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQSFTDHKSLKYFFTPKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDFERAEIAVSVGAVTLQLAQLTV
Homology
[Close]
BLAST of Cmc11g0295211 vs. NCBI nr
Match: KAA0053259.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 884.8 bits (2285), Expect = 3.1e-253
Identity = 441/443 (99.55%), Postives = 442/443 (99.77%), Query Frame = 0 

Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPYGGPILFVKKKDGSMRLCIDYRELNKVTVKNK 60
           MAPAELKELKVQLQELLDKGFIRPSVSPYGGPILFVKKKDGSMRLCIDYRELNKVTVKNK
Sbjct: 505 MAPAELKELKVQLQELLDKGFIRPSVSPYGGPILFVKKKDGSMRLCIDYRELNKVTVKNK 564

Query: 61  YPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKDSHVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKDSHVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 565 YPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKDSHVPKTAFRSRYGHYEFIVMSFGLT 624

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRVVLETFQSNKLYAKFS 180
           NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRVVLETF+SNKLYAKFS
Sbjct: 625 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRVVLETFRSNKLYAKFS 684

Query: 181 KCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGRPRPSTVSEVRSFLGLASYYRQFVENF 240
           KCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGRPRPSTVSEVRSFLGLASYYRQFVENF
Sbjct: 685 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGRPRPSTVSEVRSFLGLASYYRQFVENF 744

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFHNLKQKLVTAPVLTVPDGSGSFMIYSDASKKGL 300
           SRIATPLTQLTRKGAPFVWSKACEDSFHNLKQKLVTAPVLTVPDGSGSFMIYSDASKKGL
Sbjct: 745 SRIATPLTQLTRKGAPFVWSKACEDSFHNLKQKLVTAPVLTVPDGSGSFMIYSDASKKGL 804

Query: 301 GCVLMQHGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQSFTDHKSL 360
           GCVLMQHGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQSFTDHKSL
Sbjct: 805 GCVLMQHGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQSFTDHKSL 864

Query: 361 KYFFTPKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHR 420
           KYFFTPKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHR
Sbjct: 865 KYFFTPKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHR 924

Query: 421 DFERAEIAVSVGAVTLQLAQLTV 444
           DFERAEIAVSVGAVTLQLAQLTV
Sbjct: 925 DFERAEIAVSVGAVTLQLAQLTV 947

[Close]
BLAST of Cmc11g0295211 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 837.4 bits (2162), Expect = 5.7e-239
Identity = 417/443 (94.13%), Postives = 427/443 (96.39%), Query Frame = 0 

Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPYGGPILFVKKKDGSMRLCIDYRELNKVTVKNK 60
            MAPAELKELKVQLQELLDKGFIRPSVSP+G P+LFVKKKDGSMRLCIDYRELNKVTVKN+
Sbjct: 580  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61   YPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKDSHVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL+GATVFSKIDLRSGYHQLRIKD  VPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRVVLETFQSNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EHEEHLR+VL+T + NKLYAKFS
Sbjct: 700  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGRPRPSTVSEVRSFLGLASYYRQFVENF 240
            KCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTG  RPSTVSEVRSFLGLA YYR+FVENF
Sbjct: 760  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFHNLKQKLVTAPVLTVPDGSGSFMIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSF NLKQKLVTAPVLTVPDGSGSF+IYSDASKKGL
Sbjct: 820  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301  GCVLMQHGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQSFTDHKSL 360
            GCVLMQ GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ FTDHKSL
Sbjct: 880  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361  KYFFTPKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHR 420
            KYFFT KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHR
Sbjct: 940  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 999

Query: 421  DFERAEIAVSVGAVTLQLAQLTV 444
            D ERAEIAVSVGAVT+QLAQLTV
Sbjct: 1000 DLERAEIAVSVGAVTMQLAQLTV 1022

[Close]
BLAST of Cmc11g0295211 vs. NCBI nr
Match: KAA0037244.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 836.6 bits (2160), Expect = 9.6e-239
Identity = 417/443 (94.13%), Postives = 427/443 (96.39%), Query Frame = 0 

Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPYGGPILFVKKKDGSMRLCIDYRELNKVTVKNK 60
            MAPAELKELKVQLQELLDKGFIRPSVSP+G P+LFVKKKDGSMRLCIDYRELNKVTVKN+
Sbjct: 614  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 673

Query: 61   YPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKDSHVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL+GATVFSKIDLRSGYHQLRIKD  VPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 674  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 733

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRVVLETFQSNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLR+VL+T + NKLYAKF 
Sbjct: 734  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNKLYAKFL 793

Query: 181  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGRPRPSTVSEVRSFLGLASYYRQFVENF 240
            KCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTG  RPSTVSEVRSFLGLA YYR+FVENF
Sbjct: 794  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 853

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFHNLKQKLVTAPVLTVPDGSGSFMIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSF NLKQKLVTAPVLTVPDGSGSF+IYSDASKKGL
Sbjct: 854  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 913

Query: 301  GCVLMQHGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQSFTDHKSL 360
            GCVLMQ GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ FTDHKSL
Sbjct: 914  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 973

Query: 361  KYFFTPKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHR 420
            KYFFT KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHR
Sbjct: 974  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1033

Query: 421  DFERAEIAVSVGAVTLQLAQLTV 444
            D ERAEIAVSVGAVT+QLAQLTV
Sbjct: 1034 DLERAEIAVSVGAVTMQLAQLTV 1056

[Close]
BLAST of Cmc11g0295211 vs. NCBI nr
Match: KAA0051357.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 836.3 bits (2159), Expect = 1.3e-238
Identity = 416/443 (93.91%), Postives = 428/443 (96.61%), Query Frame = 0 

Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPYGGPILFVKKKDGSMRLCIDYRELNKVTVKNK 60
            MAPAELKELKVQLQELLDKGFIRP+VSP+G P+LFVKKKDGSMRLCIDYRELNKVTVKN+
Sbjct: 570  MAPAELKELKVQLQELLDKGFIRPNVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 629

Query: 61   YPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKDSHVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL+GATVFSKIDLRSGY+QLRIKD  VPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 630  YPLPRIDDLFDQLQGATVFSKIDLRSGYNQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 689

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRVVLETFQSNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EHEEHLR+VL+T + NKLYAKFS
Sbjct: 690  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 749

Query: 181  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGRPRPSTVSEVRSFLGLASYYRQFVENF 240
            KCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTG  RPSTVSEVRSFLGLA YYR+FVENF
Sbjct: 750  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 809

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFHNLKQKLVTAPVLTVPDGSGSFMIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSF NLKQKLVTAPVLTVPDGSGSF+IYSDASKKGL
Sbjct: 810  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 869

Query: 301  GCVLMQHGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQSFTDHKSL 360
            GCVLMQ GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ FTDHKSL
Sbjct: 870  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 929

Query: 361  KYFFTPKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHR 420
            KYFFT KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHR
Sbjct: 930  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 989

Query: 421  DFERAEIAVSVGAVTLQLAQLTV 444
            D ERAEIAVSVGAVT+QLAQLTV
Sbjct: 990  DLERAEIAVSVGAVTMQLAQLTV 1012

[Close]
BLAST of Cmc11g0295211 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 835.1 bits (2156), Expect = 2.8e-238
Identity = 416/443 (93.91%), Postives = 426/443 (96.16%), Query Frame = 0 

Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPYGGPILFVKKKDGSMRLCIDYRELNKVTVKNK 60
            MAPAELKELKVQLQELLDKGFIRPSVSP+G P+LFVKKKDGSMRLCIDYRELNKVTVKN+
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKDSHVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL+GATVFSKIDLRSGYHQLRIKD  VPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRVVLETFQSNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EHEEHLR+VL+T + NKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGRPRPSTVSEVRSFLGLASYYRQFVENF 240
            KCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTG  RPSTVSEVRSFLGLA YYR+FVENF
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFHNLKQKLVTAPVLTVPDGSGSFMIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSF  LKQKLVTAPVLTVPDGSGSF+IYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  GCVLMQHGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQSFTDHKSL 360
            GCVLMQ GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ FTDHKSL
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1193

Query: 361  KYFFTPKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHR 420
            KYFFT KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHR
Sbjct: 1194 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1253

Query: 421  DFERAEIAVSVGAVTLQLAQLTV 444
            D ERAEIAVSVGAVT+QLAQLTV
Sbjct: 1254 DLERAEIAVSVGAVTMQLAQLTV 1276

[Close]
BLAST of Cmc11g0295211 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 2.6e-85
Identity = 163/403 (40.45%), Postives = 246/403 (61.04%), Query Frame = 0 

Query: 7   KELKVQLQELLDKGFIRPSVSPYGGPILFV-KKKDGS----MRLCIDYRELNKVTVKNKY 66
           +E++ Q+Q++L++G IR S SPY  PI  V KK+D S     R+ IDYR+LN++TV +++
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRH 280

Query: 67  PLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKDSHVPKTAFRSRYGHYEFIVMSFGLTN 126
           P+P +D++  +L     F+ IDL  G+HQ+ +    V KTAF +++GHYE++ M FGL N
Sbjct: 281 PIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN 340

Query: 127 APAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRVVLETFQSNKLYAKFSK 186
           APA F   MN + R  L+   +V++DDI+++S +  EH + L +V E      L  +  K
Sbjct: 341 APATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDK 400

Query: 187 CEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGRPRPSTVSEVRSFLGLASYYRQFVENFS 246
           CEF  ++ +FLGHV++   +  +P KIEA+   P P+   E+++FLGL  YYR+F+ NF+
Sbjct: 401 CEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFA 460

Query: 247 RIATPLTQLTRKGAPFVWSKACEDS-FHNLKQKLVTAPVLTVPDGSGSFMIYSDASKKGL 306
            IA P+T+  +K      +    DS F  LK  +   P+L VPD +  F + +DAS   L
Sbjct: 461 DIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVAL 520

Query: 307 GCVLMQHGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQSFTDHKSL 366
           G VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +  +DH+ L
Sbjct: 521 GAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPL 580

Query: 367 KYFFTPKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR 404
            + +  K+ N +  RW   + ++D +I Y  GK N VADALSR
Sbjct: 581 SWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR 623

[Close]
BLAST of Cmc11g0295211 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 5.4e-83
Identity = 154/402 (38.31%), Postives = 238/402 (59.20%), Query Frame = 0 

Query: 8   ELKVQLQELLDKGFIRPSVSPYGGPILFVKKKD-----GSMRLCIDYRELNKVTVKNKYP 67
           E++ Q+QE+L++G IR S SPY  P   V KK         R+ IDYR+LN++T+ ++YP
Sbjct: 221 EVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYP 280

Query: 68  LPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKDSHVPKTAFRSRYGHYEFIVMSFGLTNA 127
           +P +D++  +L     F+ IDL  G+HQ+ + +  + KTAF ++ GHYE++ M FGL NA
Sbjct: 281 IPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNA 340

Query: 128 PAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRVVLETFQSNKLYAKFSKC 187
           PA F   MN + R  L+   +V++DDI+I+S +  EH   +++V        L  +  KC
Sbjct: 341 PATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKC 400

Query: 188 EFWLKQVSFLGHVVSKARVSVDPAKIEAVTGRPRPSTVSEVRSFLGLASYYRQFVENFSR 247
           EF  K+ +FLGH+V+   +  +P K++A+   P P+   E+R+FLGL  YYR+F+ N++ 
Sbjct: 401 EFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYAD 460

Query: 248 IATPLTQLTRKGAPFVWSK-ACEDSFHNLKQKLVTAPVLTVPDGSGSFMIYSDASKKGLG 307
           IA P+T   +K       K    ++F  LK  ++  P+L +PD    F++ +DAS   LG
Sbjct: 461 IAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALG 520

Query: 308 CVLMQHGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQSFTDHKSLK 367
            VL Q+G  +++ SR L  HE NY   + EL A+V+A K +RHYL G +    +DH+ L+
Sbjct: 521 AVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLR 580

Query: 368 YFFTPKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR 404
           +    KE   +  RW   + +Y  +I Y  GK N VADALSR
Sbjct: 581 WLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

[Close]
BLAST of Cmc11g0295211 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 9.2e-83
Identity = 158/417 (37.89%), Postives = 248/417 (59.47%), Query Frame = 0 

Query: 8   ELKVQLQELLDKGFIRPSVSPYGGPILFVKKK-----DGSMRLCIDYRELNKVTVKNKYP 67
           E++ Q+ ELL  G IRPS SPY  PI  V KK     +   R+ +D++ LN VT+ + YP
Sbjct: 138 EVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYP 197

Query: 68  LPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKDSHVPKTAFRSRYGHYEFIVMSFGLTNA 127
           +P I+     L  A  F+ +DL SG+HQ+ +K+S +PKTAF +  G YEF+ + FGL NA
Sbjct: 198 IPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNA 257

Query: 128 PAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRVVLETFQSNKLYAKFSKC 187
           PA+F  +++ + RE +     V+IDDI+++S+    H ++LR+VL +     L     K 
Sbjct: 258 PAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKS 317

Query: 188 EFWLKQVSFLGHVVSKARVSVDPAKIEAVTGRPRPSTVSEVRSFLGLASYYRQFVENFSR 247
            F   QV FLG++V+   +  DP K+ A++  P P++V E++ FLG+ SYYR+F++++++
Sbjct: 318 HFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAK 377

Query: 248 IATPLTQLTR-----------KGAPFVWSKACEDSFHNLKQKLVTAPVLTVPDGSGSFMI 307
           +A PLT LTR              P    +    SF++LK  L ++ +L  P  +  F +
Sbjct: 378 VAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHL 437

Query: 308 YSDASKKGLGCVLMQ----HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 367
            +DAS   +G VL Q      + +AY SR L   E+NY T + E+ A++++L   R YLY
Sbjct: 438 TTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLY 497

Query: 368 GE-KIQSFTDHKSLKYFFTPKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR 404
           G   I+ +TDH+ L +    +  N + +RW   +++Y+CE++Y PGK+NVVADALSR
Sbjct: 498 GAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGKSNVVADALSR 554

[Close]
BLAST of Cmc11g0295211 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 293.5 bits (750), Expect = 4.0e-78
Identity = 159/405 (39.26%), Postives = 237/405 (58.52%), Query Frame = 0 

Query: 7    KELKVQLQELLDKGFIRPSVSPYGGPILFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRI 66
            +E+   +Q+LLD  FI PS SP   P++ V KKDG+ RLC+DYR LNK T+ + +PLPRI
Sbjct: 610  QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 669

Query: 67   DDLFDQLKGATVFSKIDLRSGYHQLRIKDSHVPKTAFRSRYGHYEFIVMSFGLTNAPAVF 126
            D+L  ++  A +F+ +DL SGYHQ+ ++     KTAF +  G YE+ VM FGL NAP+ F
Sbjct: 670  DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 729

Query: 127  MDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRVVLETFQSNKLYAKFSKCEFWL 186
               M   FR+    FV V++DDILI+S++  EH +HL  VLE  ++  L  K  KC+F  
Sbjct: 730  ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFAS 789

Query: 187  KQVSFLGHVVSKARVSVDPAKIEAVTGRPRPSTVSEVRSFLGLASYYRQFVENFSRIATP 246
            ++  FLG+ +   +++    K  A+   P P TV + + FLG+ +YYR+F+ N S+IA P
Sbjct: 790  EETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP 849

Query: 247  LTQLTRKGAPFVWSKACEDSFHNLKQKLVTAPVLTVPDGSGSFMIYSDASKKGLGCVLMQ 306
            +       +   W++  + +   LK  L  +PVL   +   ++ + +DASK G+G VL +
Sbjct: 850  IQLFICDKSQ--WTEKQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEE 909

Query: 307  HGK------VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQSFTDHKSL 366
                     VV Y S+ L+S ++NYP  +LEL  ++ AL  +R+ L+G+     TDH SL
Sbjct: 910  VDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISL 969

Query: 367  KYFFTPKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV 406
                   E   R +RWL+ +  YD  + Y  G  NVVADA+SR V
Sbjct: 970  LSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAV 1010

[Close]
BLAST of Cmc11g0295211 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 293.1 bits (749), Expect = 5.2e-78
Identity = 158/405 (39.01%), Postives = 237/405 (58.52%), Query Frame = 0 

Query: 7    KELKVQLQELLDKGFIRPSVSPYGGPILFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRI 66
            +E+   +Q+LLD  FI PS SP   P++ V KKDG+ RLC+DYR LNK T+ + +PLPRI
Sbjct: 636  QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 695

Query: 67   DDLFDQLKGATVFSKIDLRSGYHQLRIKDSHVPKTAFRSRYGHYEFIVMSFGLTNAPAVF 126
            D+L  ++  A +F+ +DL SGYHQ+ ++     KTAF +  G YE+ VM FGL NAP+ F
Sbjct: 696  DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 755

Query: 127  MDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRVVLETFQSNKLYAKFSKCEFWL 186
               M   FR+    FV V++DDILI+S++  EH +HL  VLE  ++  L  K  KC+F  
Sbjct: 756  ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFAS 815

Query: 187  KQVSFLGHVVSKARVSVDPAKIEAVTGRPRPSTVSEVRSFLGLASYYRQFVENFSRIATP 246
            ++  FLG+ +   +++    K  A+   P P TV + + FLG+ +YYR+F+ N S+IA P
Sbjct: 816  EETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP 875

Query: 247  LTQLTRKGAPFVWSKACEDSFHNLKQKLVTAPVLTVPDGSGSFMIYSDASKKGLGCVLMQ 306
            +       +   W++  + +   LK  L  +PVL   +   ++ + +DASK G+G VL +
Sbjct: 876  IQLFICDKSQ--WTEKQDKAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEE 935

Query: 307  HGK------VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQSFTDHKSL 366
                     VV Y S+ L+S ++NYP  +LEL  ++ AL  +R+ L+G+     TDH SL
Sbjct: 936  VDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISL 995

Query: 367  KYFFTPKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV 406
                   E   R +RWL+ +  YD  + Y  G  NVVADA+SR +
Sbjct: 996  LSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAI 1036

[Close]
BLAST of Cmc11g0295211 vs. ExPASy TrEMBL
Match: A0A5A7UIF4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00530 PE=4 SV=1)

HSP 1 Score: 884.8 bits (2285), Expect = 1.5e-253
Identity = 441/443 (99.55%), Postives = 442/443 (99.77%), Query Frame = 0 

Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPYGGPILFVKKKDGSMRLCIDYRELNKVTVKNK 60
           MAPAELKELKVQLQELLDKGFIRPSVSPYGGPILFVKKKDGSMRLCIDYRELNKVTVKNK
Sbjct: 505 MAPAELKELKVQLQELLDKGFIRPSVSPYGGPILFVKKKDGSMRLCIDYRELNKVTVKNK 564

Query: 61  YPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKDSHVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKDSHVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 565 YPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKDSHVPKTAFRSRYGHYEFIVMSFGLT 624

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRVVLETFQSNKLYAKFS 180
           NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRVVLETF+SNKLYAKFS
Sbjct: 625 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRVVLETFRSNKLYAKFS 684

Query: 181 KCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGRPRPSTVSEVRSFLGLASYYRQFVENF 240
           KCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTGRPRPSTVSEVRSFLGLASYYRQFVENF
Sbjct: 685 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGRPRPSTVSEVRSFLGLASYYRQFVENF 744

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFHNLKQKLVTAPVLTVPDGSGSFMIYSDASKKGL 300
           SRIATPLTQLTRKGAPFVWSKACEDSFHNLKQKLVTAPVLTVPDGSGSFMIYSDASKKGL
Sbjct: 745 SRIATPLTQLTRKGAPFVWSKACEDSFHNLKQKLVTAPVLTVPDGSGSFMIYSDASKKGL 804

Query: 301 GCVLMQHGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQSFTDHKSL 360
           GCVLMQHGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQSFTDHKSL
Sbjct: 805 GCVLMQHGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQSFTDHKSL 864

Query: 361 KYFFTPKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHR 420
           KYFFTPKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHR
Sbjct: 865 KYFFTPKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHR 924

Query: 421 DFERAEIAVSVGAVTLQLAQLTV 444
           DFERAEIAVSVGAVTLQLAQLTV
Sbjct: 925 DFERAEIAVSVGAVTLQLAQLTV 947

[Close]
BLAST of Cmc11g0295211 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 837.4 bits (2162), Expect = 2.7e-239
Identity = 417/443 (94.13%), Postives = 427/443 (96.39%), Query Frame = 0 

Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPYGGPILFVKKKDGSMRLCIDYRELNKVTVKNK 60
            MAPAELKELKVQLQELLDKGFIRPSVSP+G P+LFVKKKDGSMRLCIDYRELNKVTVKN+
Sbjct: 580  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61   YPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKDSHVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL+GATVFSKIDLRSGYHQLRIKD  VPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRVVLETFQSNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EHEEHLR+VL+T + NKLYAKFS
Sbjct: 700  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGRPRPSTVSEVRSFLGLASYYRQFVENF 240
            KCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTG  RPSTVSEVRSFLGLA YYR+FVENF
Sbjct: 760  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFHNLKQKLVTAPVLTVPDGSGSFMIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSF NLKQKLVTAPVLTVPDGSGSF+IYSDASKKGL
Sbjct: 820  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301  GCVLMQHGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQSFTDHKSL 360
            GCVLMQ GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ FTDHKSL
Sbjct: 880  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361  KYFFTPKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHR 420
            KYFFT KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHR
Sbjct: 940  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 999

Query: 421  DFERAEIAVSVGAVTLQLAQLTV 444
            D ERAEIAVSVGAVT+QLAQLTV
Sbjct: 1000 DLERAEIAVSVGAVTMQLAQLTV 1022

[Close]
BLAST of Cmc11g0295211 vs. ExPASy TrEMBL
Match: A0A5A7T190 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001700 PE=4 SV=1)

HSP 1 Score: 836.6 bits (2160), Expect = 4.7e-239
Identity = 417/443 (94.13%), Postives = 427/443 (96.39%), Query Frame = 0 

Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPYGGPILFVKKKDGSMRLCIDYRELNKVTVKNK 60
            MAPAELKELKVQLQELLDKGFIRPSVSP+G P+LFVKKKDGSMRLCIDYRELNKVTVKN+
Sbjct: 614  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 673

Query: 61   YPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKDSHVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL+GATVFSKIDLRSGYHQLRIKD  VPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 674  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 733

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRVVLETFQSNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLR+VL+T + NKLYAKF 
Sbjct: 734  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNKLYAKFL 793

Query: 181  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGRPRPSTVSEVRSFLGLASYYRQFVENF 240
            KCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTG  RPSTVSEVRSFLGLA YYR+FVENF
Sbjct: 794  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 853

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFHNLKQKLVTAPVLTVPDGSGSFMIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSF NLKQKLVTAPVLTVPDGSGSF+IYSDASKKGL
Sbjct: 854  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 913

Query: 301  GCVLMQHGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQSFTDHKSL 360
            GCVLMQ GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ FTDHKSL
Sbjct: 914  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 973

Query: 361  KYFFTPKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHR 420
            KYFFT KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHR
Sbjct: 974  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1033

Query: 421  DFERAEIAVSVGAVTLQLAQLTV 444
            D ERAEIAVSVGAVT+QLAQLTV
Sbjct: 1034 DLERAEIAVSVGAVTMQLAQLTV 1056

[Close]
BLAST of Cmc11g0295211 vs. ExPASy TrEMBL
Match: A0A5A7UAA8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00800 PE=4 SV=1)

HSP 1 Score: 836.3 bits (2159), Expect = 6.1e-239
Identity = 416/443 (93.91%), Postives = 428/443 (96.61%), Query Frame = 0 

Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPYGGPILFVKKKDGSMRLCIDYRELNKVTVKNK 60
            MAPAELKELKVQLQELLDKGFIRP+VSP+G P+LFVKKKDGSMRLCIDYRELNKVTVKN+
Sbjct: 570  MAPAELKELKVQLQELLDKGFIRPNVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 629

Query: 61   YPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKDSHVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL+GATVFSKIDLRSGY+QLRIKD  VPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 630  YPLPRIDDLFDQLQGATVFSKIDLRSGYNQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 689

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRVVLETFQSNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EHEEHLR+VL+T + NKLYAKFS
Sbjct: 690  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 749

Query: 181  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGRPRPSTVSEVRSFLGLASYYRQFVENF 240
            KCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTG  RPSTVSEVRSFLGLA YYR+FVENF
Sbjct: 750  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 809

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFHNLKQKLVTAPVLTVPDGSGSFMIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSF NLKQKLVTAPVLTVPDGSGSF+IYSDASKKGL
Sbjct: 810  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 869

Query: 301  GCVLMQHGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQSFTDHKSL 360
            GCVLMQ GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ FTDHKSL
Sbjct: 870  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 929

Query: 361  KYFFTPKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHR 420
            KYFFT KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHR
Sbjct: 930  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 989

Query: 421  DFERAEIAVSVGAVTLQLAQLTV 444
            D ERAEIAVSVGAVT+QLAQLTV
Sbjct: 990  DLERAEIAVSVGAVTMQLAQLTV 1012

[Close]
BLAST of Cmc11g0295211 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 835.1 bits (2156), Expect = 1.4e-238
Identity = 416/443 (93.91%), Postives = 426/443 (96.16%), Query Frame = 0 

Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPYGGPILFVKKKDGSMRLCIDYRELNKVTVKNK 60
            MAPAELKELKVQLQELLDKGFIRPSVSP+G P+LFVKKKDGSMRLCIDYRELNKVTVKN+
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKDSHVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL+GATVFSKIDLRSGYHQLRIKD  VPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRVVLETFQSNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EHEEHLR+VL+T + NKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGRPRPSTVSEVRSFLGLASYYRQFVENF 240
            KCEFWLKQVSFLGHVVSKA VSVDPAKIEAVTG  RPSTVSEVRSFLGLA YYR+FVENF
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFHNLKQKLVTAPVLTVPDGSGSFMIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSF  LKQKLVTAPVLTVPDGSGSF+IYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  GCVLMQHGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQSFTDHKSL 360
            GCVLMQ GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ FTDHKSL
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1193

Query: 361  KYFFTPKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHR 420
            KYFFT KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHS ALITRQAPLHR
Sbjct: 1194 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1253

Query: 421  DFERAEIAVSVGAVTLQLAQLTV 444
            D ERAEIAVSVGAVT+QLAQLTV
Sbjct: 1254 DLERAEIAVSVGAVTMQLAQLTV 1276

[Close]
BLAST of Cmc11g0295211 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 110.5 bits (275), Expect = 3.4e-24
Identity = 53/125 (42.40%), Postives = 80/125 (64.00%), Query Frame = 0 

Query: 162 HLRVVLETFQSNKLYAKFSKCEFWLKQVSFLG--HVVSKARVSVDPAKIEAVTGRPRPST 221
           HL +VL+ ++ ++ YA   KC F   Q+++LG  H++S   VS DPAK+EA+ G P P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 222 VSEVRSFLGLASYYRQFVENFSRIATPLTQLTRKGAPFVWSKACEDSFHNLKQKLVTAPV 281
            +E+R FLGL  YYR+FV+N+ +I  PLT+L +K +   W++    +F  LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 282 LTVPD 285
           L +PD
Sbjct: 123 LALPD 126

The following BLAST results are available for this feature:
BLAST of Cmc11g0295211 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0053259.13.1e-25399.55pol protein [Cucumis melo var. makuwa][more]
KAA0048687.15.7e-23994.13pol protein [Cucumis melo var. makuwa][more]
KAA0037244.19.6e-23994.13reverse transcriptase [Cucumis melo var. makuwa][more]
KAA0051357.11.3e-23893.91pol protein [Cucumis melo var. makuwa][more]
TYK01613.12.8e-23893.91pol protein [Cucumis melo var. makuwa][more]
BLAST of Cmc11g0295211 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P043232.6e-8540.45Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
P208255.4e-8338.31Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... [more]
Q8I7P99.2e-8337.89Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... [more]
Q993154.0e-7839.26Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Q7LHG55.2e-7839.01Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
BLAST of Cmc11g0295211 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UIF41.5e-25399.55Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold10... [more]
A0A5A7U3302.7e-23994.13Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43... [more]
A0A5A7T1904.7e-23994.13Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37... [more]
A0A5A7UAA86.1e-23993.91Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55... [more]
A0A5D3BPI11.4e-23893.91Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45... [more]
BLAST of Cmc11g0295211 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00860.13.4e-2442.40DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 61..196
e-value: 2.2E-84
score: 284.0
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 206..297
e-value: 4.1E-29
score: 102.4
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 287..383
e-value: 6.5E-33
score: 113.2
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 36..195
e-value: 8.0E-28
score: 97.5
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 17..196
score: 11.991465
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 1..121
e-value: 2.2E-84
score: 284.0
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 2..392
NoneNo IPR availablePANTHERPTHR24559:SF324TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEINcoord: 2..392
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 291..405
e-value: 9.2379E-57
score: 181.537
NoneNo IPR availableCDDcd01647RT_LTRcoord: 20..196
e-value: 6.56525E-94
score: 279.095
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 2..389

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0295211.1Cmc11g0295211.1mRNA