Cmc11g0294551 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0294551
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr11: 11269023 .. 11269433 (-)
RNA-Seq Expression	Cmc11g0294551
Synteny	Cmc11g0294551

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGGTTGGTTGATGAAATGTTATCGTTTAAAATTATACAGGCAAGCAATAATCCATACTCAAGTCTGGTGTTGTTGGTCAAGAAAAAAGATGGAAGTTGGAGATTTTGTGTGGATTACCGCACACTTAATAACGTAACGATATCAGATAAGTTTCCCATTCCCGTTATTGAAGAATTATTTGATGAACTTAATGGTACAAATCTCTTTTCTAAAATTGATTTAAAGGTTGGATATCATCAAATAAGGATGCATAAGGAAGATATAAAGGAAACTACATTTAGAACACACGAGGGACACTATAAATTTTTAGTGATGATGCCCTTTGGTTTAACAAATGCACCAGTTACATTTCAGTCTCTTATGAATTGTATATTTGAGGAAATTTGTCATAGTGTTTTTCGATGA

mRNA sequence

ATGGAAAGGTTGGTTGATGAAATGTTATCGTTTAAAATTATACAGGCAAGCAATAATCCATACTCAAGTCTGGTGTTGTTGGTCAAGAAAAAAGATGGAAGTTGGAGATTTTGTGTGGATTACCGCACACTTAATAACGTAACGATATCAGATAAGTTTCCCATTCCCGTTATTGAAGAATTATTTGATGAACTTAATGGTACAAATCTCTTTTCTAAAATTGATTTAAAGGTTGGATATCATCAAATAAGGATGCATAAGGAAGATATAAAGGAAACTACATTTAGAACACACGAGGGACACTATAAATTTTTAGTGATGATGCCCTTTGGTTTAACAAATGCACCAGTTACATTTCAGTCTCTTATGAATTGTATATTTGAGGAAATTTGTCATAGTGTTTTTCGATGA

Coding sequence (CDS)

ATGGAAAGGTTGGTTGATGAAATGTTATCGTTTAAAATTATACAGGCAAGCAATAATCCATACTCAAGTCTGGTGTTGTTGGTCAAGAAAAAAGATGGAAGTTGGAGATTTTGTGTGGATTACCGCACACTTAATAACGTAACGATATCAGATAAGTTTCCCATTCCCGTTATTGAAGAATTATTTGATGAACTTAATGGTACAAATCTCTTTTCTAAAATTGATTTAAAGGTTGGATATCATCAAATAAGGATGCATAAGGAAGATATAAAGGAAACTACATTTAGAACACACGAGGGACACTATAAATTTTTAGTGATGATGCCCTTTGGTTTAACAAATGCACCAGTTACATTTCAGTCTCTTATGAATTGTATATTTGAGGAAATTTGTCATAGTGTTTTTCGATGA

Protein sequence

MERLVDEMLSFKIIQASNNPYSSLVLLVKKKDGSWRFCVDYRTLNNVTISDKFPIPVIEELFDELNGTNLFSKIDLKVGYHQIRMHKEDIKETTFRTHEGHYKFLVMMPFGLTNAPVTFQSLMNCIFEEICHSVFR

Homology

[Close]

BLAST of Cmc11g0294551 vs. NCBI nr
Match: KAA0037155.1 (peroxidase 64 [Cucumis melo var. makuwa] >TYK13918.1 peroxidase 64 [Cucumis melo var. makuwa])

HSP 1 Score: 215.7 bits (548), Expect = 2.5e-52
Identity = 102/127 (80.31%), Postives = 113/127 (88.98%), Query Frame = 0


Query: 1   MERLVDEMLSFKIIQASNNPYSSLVLLVKKKDGSWRFCVDYRTLNNVTISDKFPIPVIEE 60
           ME+LVDEM+S  IIQ  N+PYSSLVLLVKK DGSWRFC++YR LNN T+ DKFPIPVIEE
Sbjct: 182 MEKLVDEMMSSGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEE 241

Query: 61  LFDELNGTNLFSKIDLKVGYHQIRMHKEDIKETTFRTHEGHYKFLVMMPFGLTNAPVTFQ 120
           LFDELNG NLFSKIDLK GYHQIRMHKEDI++T FRTHEGHY+FLV MPFGLTNAP TFQ
Sbjct: 242 LFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLV-MPFGLTNAPATFQ 301

Query: 121 SLMNCIF 128
           SL+N +F
Sbjct: 302 SLVNSVF 307

[Close]

BLAST of Cmc11g0294551 vs. NCBI nr
Match: KAA0061635.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 213.0 bits (541), Expect = 1.6e-51
Identity = 100/128 (78.12%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 1   MERLVDEMLSFKIIQASNNPYSSLVLLVKKKDGSWRFCVDYRTLNNVTISDKFPIPVIEE 60
           MERLVDEML+  II++S +PYSS VLLV+KKDGSWRFCVDYR LNNVT+ DKFPIPV+EE
Sbjct: 638 MERLVDEMLTSGIIRSSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 697

Query: 61  LFDELNGTNLFSKIDLKVGYHQIRMHKEDIKETTFRTHEGHYKFLVMMPFGLTNAPVTFQ 120
           LFDELNG ++FSKIDLK GYHQIRMH EDI++TTFRTHEGHY+F+V MPFGLTNAP TFQ
Sbjct: 698 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTTFRTHEGHYEFMV-MPFGLTNAPSTFQ 757

Query: 121 SLMNCIFE 129
           +LMN +F+
Sbjct: 758 ALMNQVFK 764

[Close]

BLAST of Cmc11g0294551 vs. NCBI nr
Match: KAA0041253.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 212.2 bits (539), Expect = 2.7e-51
Identity = 100/128 (78.12%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MERLVDEMLSFKIIQASNNPYSSLVLLVKKKDGSWRFCVDYRTLNNVTISDKFPIPVIEE 60
           MERLVDEML+  II+ S +PYSS VLLV+KKDGSWRFCVDYR LNNVT+ DKFPIPV+EE
Sbjct: 92  MERLVDEMLTSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 151

Query: 61  LFDELNGTNLFSKIDLKVGYHQIRMHKEDIKETTFRTHEGHYKFLVMMPFGLTNAPVTFQ 120
           LFDELNG ++FSKIDLK GYHQIRMH EDI++TTFRTHEGHY+F+V MPFGLTNAP TFQ
Sbjct: 152 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTTFRTHEGHYEFMV-MPFGLTNAPSTFQ 211

Query: 121 SLMNCIFE 129
           +LMN +F+
Sbjct: 212 ALMNQVFK 218

[Close]

BLAST of Cmc11g0294551 vs. NCBI nr
Match: TYK16053.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 212.2 bits (539), Expect = 2.7e-51
Identity = 100/128 (78.12%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MERLVDEMLSFKIIQASNNPYSSLVLLVKKKDGSWRFCVDYRTLNNVTISDKFPIPVIEE 60
           MERLVDEML+  II+ S +PYSS VLLV+KKDGSWRFCVDYR LNNVT+ DKFPIPV+EE
Sbjct: 92  MERLVDEMLTSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 151

Query: 61  LFDELNGTNLFSKIDLKVGYHQIRMHKEDIKETTFRTHEGHYKFLVMMPFGLTNAPVTFQ 120
           LFDELNG ++FSKIDLK GYHQIRMH EDI++TTFRTHEGHY+F+V MPFGLTNAP TFQ
Sbjct: 152 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTTFRTHEGHYEFMV-MPFGLTNAPSTFQ 211

Query: 121 SLMNCIFE 129
           +LMN +F+
Sbjct: 212 ALMNQVFK 218

[Close]

BLAST of Cmc11g0294551 vs. NCBI nr
Match: TYK23090.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 211.5 bits (537), Expect = 4.7e-51
Identity = 100/128 (78.12%), Postives = 114/128 (89.06%), Query Frame = 0


Query: 1   MERLVDEMLSFKIIQASNNPYSSLVLLVKKKDGSWRFCVDYRTLNNVTISDKFPIPVIEE 60
           MERLVDEMLS  II+ S +PYSS VLLV+KKDGSWRFCVDYR LNNVT+ DKFPIPV+EE
Sbjct: 638 MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 697

Query: 61  LFDELNGTNLFSKIDLKVGYHQIRMHKEDIKETTFRTHEGHYKFLVMMPFGLTNAPVTFQ 120
           LFDELNG ++FSKIDLK GYHQIRMH EDI++T FRTHEGHY+F+V MPFGLTNAP TFQ
Sbjct: 698 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMV-MPFGLTNAPSTFQ 757

Query: 121 SLMNCIFE 129
           +LMN +F+
Sbjct: 758 ALMNQVFK 764

[Close]

BLAST of Cmc11g0294551 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 122.5 bits (306), Expect = 3.7e-27
Identity = 61/130 (46.92%), Postives = 82/130 (63.08%), Query Frame = 0


Query: 1   MERLVDEMLSFKIIQASNNPYSSLVLLVKKKDGSWRFCVDYRTLNNVTISDKFPIPVIEE 60
           + ++V ++L  K I  S +P SS V+LV KKDG++R CVDYRTLN  TISD FP+P I+ 
Sbjct: 612 INKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDN 671

Query: 61  LFDELNGTNLFSKIDLKVGYHQIRMHKEDIKETTFRTHEGHYKFLVMMPFGLTNAPVTFQ 120
           L   +    +F+ +DL  GYHQI M  +D  +T F T  G Y++ V MPFGL NAP TF 
Sbjct: 672 LLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTV-MPFGLVNAPSTFA 731

Query: 121 SLMNCIFEEI 131
             M   F ++
Sbjct: 732 RYMADTFRDL 740

[Close]

BLAST of Cmc11g0294551 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 3.7e-27
Identity = 61/130 (46.92%), Postives = 82/130 (63.08%), Query Frame = 0


Query: 1   MERLVDEMLSFKIIQASNNPYSSLVLLVKKKDGSWRFCVDYRTLNNVTISDKFPIPVIEE 60
           + ++V ++L  K I  S +P SS V+LV KKDG++R CVDYRTLN  TISD FP+P I+ 
Sbjct: 638 INKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDN 697

Query: 61  LFDELNGTNLFSKIDLKVGYHQIRMHKEDIKETTFRTHEGHYKFLVMMPFGLTNAPVTFQ 120
           L   +    +F+ +DL  GYHQI M  +D  +T F T  G Y++ V MPFGL NAP TF 
Sbjct: 698 LLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTV-MPFGLVNAPSTFA 757

Query: 121 SLMNCIFEEI 131
             M   F ++
Sbjct: 758 RYMADTFRDL 766

[Close]

BLAST of Cmc11g0294551 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 7.1e-26
Identity = 60/135 (44.44%), Postives = 86/135 (63.70%), Query Frame = 0


Query: 1   MERLVDEMLSFKIIQASNNPYSSLVLLV-KKKDGS----WRFCVDYRTLNNVTISDKFPI 60
           +E  + +ML+  II+ SN+PY+S + +V KK+D S    +R  +DYR LN +T+ D+ PI
Sbjct: 223 VESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPI 282

Query: 61  PVIEELFDELNGTNLFSKIDLKVGYHQIRMHKEDIKETTFRTHEGHYKFLVMMPFGLTNA 120
           P ++E+  +L   N F+ IDL  G+HQI M  E + +T F T  GHY++L  MPFGL NA
Sbjct: 283 PNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYL-RMPFGLKNA 342

Query: 121 PVTFQSLMNCIFEEI 131
           P TFQ  MN I   +
Sbjct: 343 PATFQRCMNDILRPL 356

[Close]

BLAST of Cmc11g0294551 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-25
Identity = 60/135 (44.44%), Postives = 83/135 (61.48%), Query Frame = 0


Query: 1   MERLVDEMLSFKIIQASNNPYSSLVLLVKKKD-----GSWRFCVDYRTLNNVTISDKFPI 60
           +E  V EML+  +I+ SN+PY+S   +V KK        +R  +DYR LN +TI D++PI
Sbjct: 222 VENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPI 281

Query: 61  PVIEELFDELNGTNLFSKIDLKVGYHQIRMHKEDIKETTFRTHEGHYKFLVMMPFGLTNA 120
           P ++E+  +L     F+ IDL  G+HQI M +E I +T F T  GHY++L  MPFGL NA
Sbjct: 282 PNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYL-RMPFGLRNA 341

Query: 121 PVTFQSLMNCIFEEI 131
           P TFQ  MN I   +
Sbjct: 342 PATFQRCMNNILRPL 355

[Close]

BLAST of Cmc11g0294551 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.3e-23
Identity = 57/134 (42.54%), Postives = 80/134 (59.70%), Query Frame = 0


Query: 1   MERLVDEMLSFKIIQASNNPYSSLVLLVKKK-----DGSWRFCVDYRTLNNVTISDKFPI 60
           +ER +DE+L   II+ SN+PY+S + +V KK     +  +R  VD++ LN VTI D +PI
Sbjct: 139 VERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPI 198

Query: 61  PVIEELFDELNGTNLFSKIDLKVGYHQIRMHKEDIKETTFRTHEGHYKFLVMMPFGLTNA 120
           P I      L     F+ +DL  G+HQI M + DI +T F T  G Y+FL  +PFGL NA
Sbjct: 199 PDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFL-RLPFGLKNA 258

Query: 121 PVTFQSLMNCIFEE 130
           P  FQ +++ I  E
Sbjct: 259 PAIFQRMIDDILRE 271

[Close]

BLAST of Cmc11g0294551 vs. ExPASy TrEMBL
Match: A0A5A7T6Q1 (Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001160 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.2e-52
Identity = 102/127 (80.31%), Postives = 113/127 (88.98%), Query Frame = 0


Query: 1   MERLVDEMLSFKIIQASNNPYSSLVLLVKKKDGSWRFCVDYRTLNNVTISDKFPIPVIEE 60
           ME+LVDEM+S  IIQ  N+PYSSLVLLVKK DGSWRFC++YR LNN T+ DKFPIPVIEE
Sbjct: 182 MEKLVDEMMSSGIIQPDNSPYSSLVLLVKKTDGSWRFCMNYRALNNATVPDKFPIPVIEE 241

Query: 61  LFDELNGTNLFSKIDLKVGYHQIRMHKEDIKETTFRTHEGHYKFLVMMPFGLTNAPVTFQ 120
           LFDELNG NLFSKIDLK GYHQIRMHKEDI++T FRTHEGHY+FLV MPFGLTNAP TFQ
Sbjct: 242 LFDELNGANLFSKIDLKAGYHQIRMHKEDIEKTAFRTHEGHYEFLV-MPFGLTNAPATFQ 301

Query: 121 SLMNCIF 128
           SL+N +F
Sbjct: 302 SLVNSVF 307

[Close]

BLAST of Cmc11g0294551 vs. ExPASy TrEMBL
Match: A0A5A7V707 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G00030 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 7.8e-52
Identity = 100/128 (78.12%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 1   MERLVDEMLSFKIIQASNNPYSSLVLLVKKKDGSWRFCVDYRTLNNVTISDKFPIPVIEE 60
           MERLVDEML+  II++S +PYSS VLLV+KKDGSWRFCVDYR LNNVT+ DKFPIPV+EE
Sbjct: 638 MERLVDEMLTSGIIRSSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 697

Query: 61  LFDELNGTNLFSKIDLKVGYHQIRMHKEDIKETTFRTHEGHYKFLVMMPFGLTNAPVTFQ 120
           LFDELNG ++FSKIDLK GYHQIRMH EDI++TTFRTHEGHY+F+V MPFGLTNAP TFQ
Sbjct: 698 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTTFRTHEGHYEFMV-MPFGLTNAPSTFQ 757

Query: 121 SLMNCIFE 129
           +LMN +F+
Sbjct: 758 ALMNQVFK 764

[Close]

BLAST of Cmc11g0294551 vs. ExPASy TrEMBL
Match: A0A5A7TDM4 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002330 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.3e-51
Identity = 100/128 (78.12%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MERLVDEMLSFKIIQASNNPYSSLVLLVKKKDGSWRFCVDYRTLNNVTISDKFPIPVIEE 60
           MERLVDEML+  II+ S +PYSS VLLV+KKDGSWRFCVDYR LNNVT+ DKFPIPV+EE
Sbjct: 92  MERLVDEMLTSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 151

Query: 61  LFDELNGTNLFSKIDLKVGYHQIRMHKEDIKETTFRTHEGHYKFLVMMPFGLTNAPVTFQ 120
           LFDELNG ++FSKIDLK GYHQIRMH EDI++TTFRTHEGHY+F+V MPFGLTNAP TFQ
Sbjct: 152 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTTFRTHEGHYEFMV-MPFGLTNAPSTFQ 211

Query: 121 SLMNCIFE 129
           +LMN +F+
Sbjct: 212 ALMNQVFK 218

[Close]

BLAST of Cmc11g0294551 vs. ExPASy TrEMBL
Match: A0A5D3CW07 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00650 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.3e-51
Identity = 100/128 (78.12%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MERLVDEMLSFKIIQASNNPYSSLVLLVKKKDGSWRFCVDYRTLNNVTISDKFPIPVIEE 60
           MERLVDEML+  II+ S +PYSS VLLV+KKDGSWRFCVDYR LNNVT+ DKFPIPV+EE
Sbjct: 92  MERLVDEMLTSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 151

Query: 61  LFDELNGTNLFSKIDLKVGYHQIRMHKEDIKETTFRTHEGHYKFLVMMPFGLTNAPVTFQ 120
           LFDELNG ++FSKIDLK GYHQIRMH EDI++TTFRTHEGHY+F+V MPFGLTNAP TFQ
Sbjct: 152 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTTFRTHEGHYEFMV-MPFGLTNAPSTFQ 211

Query: 121 SLMNCIFE 129
           +LMN +F+
Sbjct: 212 ALMNQVFK 218

[Close]

BLAST of Cmc11g0294551 vs. ExPASy TrEMBL
Match: A0A5D3CXB1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G001180 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.3e-51
Identity = 100/128 (78.12%), Postives = 114/128 (89.06%), Query Frame = 0


Query: 1   MERLVDEMLSFKIIQASNNPYSSLVLLVKKKDGSWRFCVDYRTLNNVTISDKFPIPVIEE 60
           MERLVDEMLS  II+ S +PYSS VLLV+KKDGSWRFCVDYR LNNVT+ DKFPIPV+EE
Sbjct: 698 MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 757

Query: 61  LFDELNGTNLFSKIDLKVGYHQIRMHKEDIKETTFRTHEGHYKFLVMMPFGLTNAPVTFQ 120
           LFDELNG ++FSKIDLK GYHQIRMH EDI++T FRTHEGHY+F+V MPFGLTNAP TFQ
Sbjct: 758 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMV-MPFGLTNAPSTFQ 817

Query: 121 SLMNCIFE 129
           +LMN +F+
Sbjct: 818 ALMNQVFK 824

[Close]

BLAST of Cmc11g0294551 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 42.4 bits (98), Expect = 3.5e-04
Identity = 20/35 (57.14%), Postives = 26/35 (74.29%), Query Frame = 0


Query: 1  MERLVDEMLSFKIIQASNNPYSSLVLLVKKKDGSW 36
          ++  + EML  +IIQ S +PYSS VLLV+KKDG W
Sbjct: 45 LKNWLGEMLEARIIQPSISPYSSPVLLVQKKDGGW 79

The following BLAST results are available for this feature:

BLAST of Cmc11g0294551 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037155.1	2.5e-52	80.31	peroxidase 64 [Cucumis melo var. makuwa] >TYK13918.1 peroxidase 64 [Cucumis melo...	[more]
KAA0061635.1	1.6e-51	78.13	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0041253.1	2.7e-51	78.13	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK16053.1	2.7e-51	78.13	Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK23090.1	4.7e-51	78.13	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0294551 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	3.7e-27	46.92	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	3.7e-27	46.92	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P04323	7.1e-26	44.44	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	1.2e-25	44.44	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q8I7P9	4.3e-23	42.54	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]

BLAST of Cmc11g0294551 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T6Q1	1.2e-52	80.31	Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001160...	[more]
A0A5A7V707	7.8e-52	78.13	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7TDM4	1.3e-51	78.13	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3CW07	1.3e-51	78.13	Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3CXB1	2.3e-51	78.13	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Cmc11g0294551 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00850.1	3.5e-04	57.14	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..114 e-value: 2.4E-52 score: 179.3
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..128
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 2..128
None	No IPR available	CDD	cd01647	RT_LTR	coord: 12..132 e-value: 1.73847E-54 score: 167.002
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 28..130 e-value: 5.0E-13 score: 49.1
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 53..130 e-value: 2.4E-52 score: 179.3
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0294551.1	Cmc11g0294551.1	mRNA