Cmc11g0293941 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0293941
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 10358833 .. 10360836 (-)
RNA-Seq Expression	Cmc11g0293941
Synteny	Cmc11g0293941

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGTGGAGCAGTACGACGCCGAGTTCGATATGTTGTCCCGCTTTGCTCCCGATATGGTAAGGGACGAGGCTGCCAGGACGGAGAAATTCGTTAGAGGACTCAGGCTAGACCTTCAGGGCATTGTCAGAGCCCTCCGCCCAGCCACGCATGCTGATGCACTACGTATAGCACTGGATTTGAGCCTGCCTGAGAGAGCCGATGCGTCTAAGGCTGCCGGCAGAGGGTCAGCCTTGGGACAGAAGAGAAAGGTTGAGACGCAGCCTGACGTAGCACCGCAGCGAACACTGAGGTCAGGAGGTGTCTTCCAGAGACACCGACGGGAGCTTGCAGCAGCCGGGAGGACTCTGAGAGAGCTACCTGCTTGTACTACCTGCGGGAGAGTCCACGGAGGTCGTTGCTTGGCTGGGAGTGGAGTCTGCTTCAGGTGCAGACAGCCGGGGCACACTGCTGATATGTGTCCTCGGAAACCCTTTGAGGCGACACCGCCCCAGCCTTCTGCGGCCCAGCAGGGGAGAGTTTTCGCCACTACCCGGCAGGAGGCCGAGCGAGCTGGCACTGTGGTGACAGGTACGCTCCCAATTTTGGGGCACTATGCTTTTGTGCTATTTGACTCTGGGTCATCCCACTCGTTTATATCCTCCGTTTTCGTTCAGCATGTGGGTTTAGAGGTAGAGCCTTTGGGTAGTGTTTTGTCGGTCTCTACTCCATCTGGGGAGGTCCTGTTATCCAAAGAACAAATAAAGGCATGTCGGGTAGAGATAGCGAATCGTATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGATTGGCTATCAGCCAACCATGCAAATATAGACTGTTATGGCAAGGAAGTTGTCTTCAACCCTCCCTCCGAGGCTAGTTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGTATTTTGGCAAGCGTAGTGGATGTGAGAGAGCCGGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGAGAGTACCCCGATGTTTTTCCAGACGAACTTCCAGGACTTCCGCCTCCCAGAGAAGTAGACTTCGCTATCGAGTTAGAGCCGGGCACTGCCCCAATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAACTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCAATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACCGTCTTCTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATCCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATCTGATGAACAGGGTGTTTAAGGAGTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCTGAGCACGAGGAGCACTTACACCAAGTTCTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCGGTGACCAACTGGACCCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAAGAAGGGAACCCTTTTGTCTGGAGCCCAGCTTGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAG

mRNA sequence

ATGACGGTGGAGCAGTACGACGCCGAGTTCGATATGTTGTCCCGCTTTGCTCCCGATATGGTAAGGGACGAGGCTGCCAGGACGGAGAAATTCGTTAGAGGACTCAGGCTAGACCTTCAGGGCATTGTCAGAGCCCTCCGCCCAGCCACGCATGCTGATGCACTACGTATAGCACTGGATTTGAGCCTGCCTGAGAGAGCCGATGCGTCTAAGGCTGCCGGCAGAGGGTCAGCCTTGGGACAGAAGAGAAAGGTTGAGACGCAGCCTGACGTAGCACCGCAGCGAACACTGAGGTCAGGAGGTGTCTTCCAGAGACACCGACGGGAGCTTGCAGCAGCCGGGAGGACTCTGAGAGAGCTACCTGCTTGTACTACCTGCGGGAGAGTCCACGGAGGTCGTTGCTTGGCTGGGAGTGGAGTCTGCTTCAGGTGCAGACAGCCGGGGCACACTGCTGATATGTGTCCTCGGAAACCCTTTGAGGCGACACCGCCCCAGCCTTCTGCGGCCCAGCAGGGGAGAGTTTTCGCCACTACCCGGCAGGAGGCCGAGCGAGCTGGCACTGTGGTGACAGGTACGCTCCCAATTTTGGGGCACTATGCTTTTGTGCTATTTGACTCTGGGTCATCCCACTCGTTTATATCCTCCGTTTTCGTTCAGCATGTGGGTTTAGAGGTAGAGCCTTTGGGTAGTGTTTTGTCGGTCTCTACTCCATCTGGGGAGGTCCTGTTATCCAAAGAACAAATAAAGGCATGTCGGGTAGAGATAGCGAATCGTATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGATTGGCTATCAGCCAACCATGCAAATATAGACTGTTATGGCAAGGAAGTTGTCTTCAACCCTCCCTCCGAGGCTAGTTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGTATTTTGGCAAGCGTAGTGGATGTGAGAGAGCCGGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGAGAGTACCCCGATGTTTTTCCAGACGAACTTCCAGGACTTCCGCCTCCCAGAGAAGTAGACTTCGCTATCGAGTTAGAGCCGGGCACTGCCCCAATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAACTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCAATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACCGTCTTCTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATCCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATCTGATGAACAGGGTGTTTAAGGAGTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCTGAGCACGAGGAGCACTTACACCAAGTTCTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCGGTGACCAACTGGACCCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAAGAAGGGAACCCTTTTGTCTGGAGCCCAGCTTGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAG

Coding sequence (CDS)

ATGACGGTGGAGCAGTACGACGCCGAGTTCGATATGTTGTCCCGCTTTGCTCCCGATATGGTAAGGGACGAGGCTGCCAGGACGGAGAAATTCGTTAGAGGACTCAGGCTAGACCTTCAGGGCATTGTCAGAGCCCTCCGCCCAGCCACGCATGCTGATGCACTACGTATAGCACTGGATTTGAGCCTGCCTGAGAGAGCCGATGCGTCTAAGGCTGCCGGCAGAGGGTCAGCCTTGGGACAGAAGAGAAAGGTTGAGACGCAGCCTGACGTAGCACCGCAGCGAACACTGAGGTCAGGAGGTGTCTTCCAGAGACACCGACGGGAGCTTGCAGCAGCCGGGAGGACTCTGAGAGAGCTACCTGCTTGTACTACCTGCGGGAGAGTCCACGGAGGTCGTTGCTTGGCTGGGAGTGGAGTCTGCTTCAGGTGCAGACAGCCGGGGCACACTGCTGATATGTGTCCTCGGAAACCCTTTGAGGCGACACCGCCCCAGCCTTCTGCGGCCCAGCAGGGGAGAGTTTTCGCCACTACCCGGCAGGAGGCCGAGCGAGCTGGCACTGTGGTGACAGGTACGCTCCCAATTTTGGGGCACTATGCTTTTGTGCTATTTGACTCTGGGTCATCCCACTCGTTTATATCCTCCGTTTTCGTTCAGCATGTGGGTTTAGAGGTAGAGCCTTTGGGTAGTGTTTTGTCGGTCTCTACTCCATCTGGGGAGGTCCTGTTATCCAAAGAACAAATAAAGGCATGTCGGGTAGAGATAGCGAATCGTATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGATTGGCTATCAGCCAACCATGCAAATATAGACTGTTATGGCAAGGAAGTTGTCTTCAACCCTCCCTCCGAGGCTAGTTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGTATTTTGGCAAGCGTAGTGGATGTGAGAGAGCCGGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGAGAGTACCCCGATGTTTTTCCAGACGAACTTCCAGGACTTCCGCCTCCCAGAGAAGTAGACTTCGCTATCGAGTTAGAGCCGGGCACTGCCCCAATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAACTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCAATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACCGTCTTCTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATCCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATCTGATGAACAGGGTGTTTAAGGAGTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCTGAGCACGAGGAGCACTTACACCAAGTTCTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCGGTGACCAACTGGACCCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAAGAAGGGAACCCTTTTGTCTGGAGCCCAGCTTGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAG

Protein sequence

MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLRELPACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFEATPPQPSAAQQGRVFATTRQEAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTLLSGAQLARGAFRSSNRS

Homology

[Close]

BLAST of Cmc11g0293941 vs. NCBI nr
Match: KAA0031437.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1283.1 bits (3319), Expect = 0.0e+00
Identity = 647/649 (99.69%), Postives = 648/649 (99.85%), Query Frame = 0


Query: 1   MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD 60
           MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD
Sbjct: 160 MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD 219

Query: 61  LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL 120
           LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL
Sbjct: 220 LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL 279

Query: 121 PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFEATPPQPSAAQQGRVFATTRQ 180
           PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFE TPPQPSAAQQGRVFATTRQ
Sbjct: 280 PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQ 339

Query: 181 EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE 240
           EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE
Sbjct: 340 EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE 399

Query: 241 VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP 300
           VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP
Sbjct: 400 VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP 459

Query: 301 SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD 360
           SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD
Sbjct: 460 SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD 519

Query: 361 VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 420
           VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV
Sbjct: 520 VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 579

Query: 421 SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 480
           SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS
Sbjct: 580 SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 639

Query: 481 GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI 540
           GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI
Sbjct: 640 GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI 699

Query: 541 DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA 600
           DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA
Sbjct: 700 DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA 759

Query: 601 KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGT 650
           KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLT+KGT
Sbjct: 760 KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGT 808

[Close]

BLAST of Cmc11g0293941 vs. NCBI nr
Match: KAA0033825.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1283.1 bits (3319), Expect = 0.0e+00
Identity = 647/649 (99.69%), Postives = 648/649 (99.85%), Query Frame = 0


Query: 1    MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD 60
            MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD
Sbjct: 824  MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD 883

Query: 61   LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL 120
            LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL
Sbjct: 884  LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL 943

Query: 121  PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFEATPPQPSAAQQGRVFATTRQ 180
            PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFE TPPQPSAAQQGRVFATTRQ
Sbjct: 944  PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQ 1003

Query: 181  EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE 240
            EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE
Sbjct: 1004 EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE 1063

Query: 241  VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP 300
            VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP
Sbjct: 1064 VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP 1123

Query: 301  SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD 360
            SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD
Sbjct: 1124 SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD 1183

Query: 361  VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 420
            VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV
Sbjct: 1184 VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 1243

Query: 421  SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 480
            SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS
Sbjct: 1244 SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 1303

Query: 481  GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI 540
            GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI
Sbjct: 1304 GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI 1363

Query: 541  DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA 600
            DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA
Sbjct: 1364 DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA 1423

Query: 601  KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGT 650
            KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLT+KGT
Sbjct: 1424 KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGT 1472

[Close]

BLAST of Cmc11g0293941 vs. NCBI nr
Match: KAA0032535.1 (pol protein [Cucumis melo var. makuwa] >KAA0033280.1 pol protein [Cucumis melo var. makuwa] >KAA0035195.1 pol protein [Cucumis melo var. makuwa] >KAA0040656.1 pol protein [Cucumis melo var. makuwa] >KAA0046921.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1283.1 bits (3319), Expect = 0.0e+00
Identity = 647/649 (99.69%), Postives = 648/649 (99.85%), Query Frame = 0


Query: 1   MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD 60
           MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD
Sbjct: 219 MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD 278

Query: 61  LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL 120
           LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL
Sbjct: 279 LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL 338

Query: 121 PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFEATPPQPSAAQQGRVFATTRQ 180
           PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFE TPPQPSAAQQGRVFATTRQ
Sbjct: 339 PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQ 398

Query: 181 EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE 240
           EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE
Sbjct: 399 EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE 458

Query: 241 VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP 300
           VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP
Sbjct: 459 VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP 518

Query: 301 SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD 360
           SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD
Sbjct: 519 SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD 578

Query: 361 VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 420
           VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV
Sbjct: 579 VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 638

Query: 421 SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 480
           SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS
Sbjct: 639 SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 698

Query: 481 GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI 540
           GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI
Sbjct: 699 GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI 758

Query: 541 DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA 600
           DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA
Sbjct: 759 DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA 818

Query: 601 KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGT 650
           KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLT+KGT
Sbjct: 819 KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGT 867

[Close]

BLAST of Cmc11g0293941 vs. NCBI nr
Match: KAA0025242.1 (pol protein [Cucumis melo var. makuwa] >KAA0036610.1 pol protein [Cucumis melo var. makuwa] >KAA0036783.1 pol protein [Cucumis melo var. makuwa] >KAA0041437.1 pol protein [Cucumis melo var. makuwa] >KAA0042939.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1283.1 bits (3319), Expect = 0.0e+00
Identity = 647/649 (99.69%), Postives = 648/649 (99.85%), Query Frame = 0


Query: 1   MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD 60
           MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD
Sbjct: 219 MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD 278

Query: 61  LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL 120
           LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL
Sbjct: 279 LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL 338

Query: 121 PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFEATPPQPSAAQQGRVFATTRQ 180
           PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFE TPPQPSAAQQGRVFATTRQ
Sbjct: 339 PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQ 398

Query: 181 EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE 240
           EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE
Sbjct: 399 EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE 458

Query: 241 VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP 300
           VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP
Sbjct: 459 VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP 518

Query: 301 SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD 360
           SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD
Sbjct: 519 SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD 578

Query: 361 VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 420
           VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV
Sbjct: 579 VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 638

Query: 421 SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 480
           SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS
Sbjct: 639 SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 698

Query: 481 GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI 540
           GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI
Sbjct: 699 GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI 758

Query: 541 DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA 600
           DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA
Sbjct: 759 DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA 818

Query: 601 KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGT 650
           KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLT+KGT
Sbjct: 819 KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGT 867

[Close]

BLAST of Cmc11g0293941 vs. NCBI nr
Match: KAA0048546.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1283.1 bits (3319), Expect = 0.0e+00
Identity = 647/649 (99.69%), Postives = 648/649 (99.85%), Query Frame = 0


Query: 1    MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD 60
            MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD
Sbjct: 541  MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD 600

Query: 61   LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL 120
            LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL
Sbjct: 601  LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL 660

Query: 121  PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFEATPPQPSAAQQGRVFATTRQ 180
            PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFE TPPQPSAAQQGRVFATTRQ
Sbjct: 661  PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQ 720

Query: 181  EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE 240
            EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE
Sbjct: 721  EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE 780

Query: 241  VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP 300
            VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP
Sbjct: 781  VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP 840

Query: 301  SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD 360
            SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD
Sbjct: 841  SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD 900

Query: 361  VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 420
            VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV
Sbjct: 901  VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 960

Query: 421  SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 480
            SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS
Sbjct: 961  SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 1020

Query: 481  GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI 540
            GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI
Sbjct: 1021 GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI 1080

Query: 541  DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA 600
            DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA
Sbjct: 1081 DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA 1140

Query: 601  KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGT 650
            KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLT+KGT
Sbjct: 1141 KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGT 1189

[Close]

BLAST of Cmc11g0293941 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 223.4 bits (568), Expect = 7.6e-57
Identity = 124/333 (37.24%), Postives = 190/333 (57.06%), Query Frame = 0


Query: 323 KASKLLSQGTWGILASVVDVREPEVSLSSEP---------VVREYPDVFPDELPGLPPPR 382
           +AS L   G +  + S +   EP  +  S           + ++Y ++  ++LP  P P 
Sbjct: 520 EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLP--PRPA 579

Query: 383 EVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVL 442
           +++       IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+
Sbjct: 580 DINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVV 639

Query: 443 FVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIR 502
            V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ + 
Sbjct: 640 LVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPME 699

Query: 503 DGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSK 562
             D  KTAF +  G YE+ VM FGL NAP+ F   M   F++    FV V++DDILI+S+
Sbjct: 700 PKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSE 759

Query: 563 TEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW 622
           +  EH +HL  VLE L+   L  K  KC+F   +  FLG+ +  + ++    K  A+ ++
Sbjct: 760 SPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDF 819

Query: 623 TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPL 642
             P TV + + FLG+  YYRRF+ + S+IA P+
Sbjct: 820 PTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPI 848

[Close]

BLAST of Cmc11g0293941 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 223.4 bits (568), Expect = 7.6e-57
Identity = 124/333 (37.24%), Postives = 190/333 (57.06%), Query Frame = 0


Query: 323 KASKLLSQGTWGILASVVDVREPEVSLSSEP---------VVREYPDVFPDELPGLPPPR 382
           +AS L   G +  + S +   EP  +  S           + ++Y ++  ++LP  P P 
Sbjct: 546 EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLP--PRPA 605

Query: 383 EVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVL 442
           +++       IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+
Sbjct: 606 DINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVV 665

Query: 443 FVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIR 502
            V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ + 
Sbjct: 666 LVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPME 725

Query: 503 DGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSK 562
             D  KTAF +  G YE+ VM FGL NAP+ F   M   F++    FV V++DDILI+S+
Sbjct: 726 PKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSE 785

Query: 563 TEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW 622
           +  EH +HL  VLE L+   L  K  KC+F   +  FLG+ +  + ++    K  A+ ++
Sbjct: 786 SPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDF 845

Query: 623 TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPL 642
             P TV + + FLG+  YYRRF+ + S+IA P+
Sbjct: 846 PTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPI 874

[Close]

BLAST of Cmc11g0293941 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.7e-56
Identity = 106/260 (40.77%), Postives = 169/260 (65.00%), Query Frame = 0


Query: 393 YRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELN 452
           Y    A  +E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ IDYR+LN
Sbjct: 213 YSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLN 272

Query: 453 KVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFV 512
           ++TV +R+P+P +D++  +L     F+ IDL  G+HQ+ +    + KTAF +++GHYE++
Sbjct: 273 EITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYL 332

Query: 513 VMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN 572
            M FGL NAPA F   MN + +  L+   +V++DDI+++S +  EH + L  V E L   
Sbjct: 333 RMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKA 392

Query: 573 KLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYY 632
            L  +  KCEF  ++ TFLGHV++ +G+  +P KIEA+  +  P+   EI++FLGL GYY
Sbjct: 393 NLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYY 452

Query: 633 RRFVEDFSRIASPLTQLTKK 648
           R+F+ +F+ IA P+T+  KK
Sbjct: 453 RKFIPNFADIAKPMTKCLKK 472

[Close]

BLAST of Cmc11g0293941 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.8e-56
Identity = 106/276 (38.41%), Postives = 169/276 (61.23%), Query Frame = 0


Query: 386 APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLC 445
           +PI    Y +A     E++ Q+QE+L++G IR S SP+ +P   V KK         R+ 
Sbjct: 205 SPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVV 264

Query: 446 IDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSR 505
           IDYR+LN++T+ +RYP+P +D++  +L     F+ IDL  G+HQ+ + +  I KTAF ++
Sbjct: 265 IDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTK 324

Query: 506 YGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQV 565
            GHYE++ M FGL NAPA F   MN + +  L+   +V++DDI+I+S +  EH   +  V
Sbjct: 325 SGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLV 384

Query: 566 LETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF 625
              L    L  +  KCEF  ++  FLGH+V+ +G+  +P K++A+ ++  P+   EIR+F
Sbjct: 385 FTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAF 444

Query: 626 LGLAGYYRRFVEDFSRIASPLTQLTKKGTLLSGAQL 657
           LGL GYYR+F+ +++ IA P+T   KK T +   +L
Sbjct: 445 LGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKL 480

[Close]

BLAST of Cmc11g0293941 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 8.4e-56
Identity = 128/395 (32.41%), Postives = 213/395 (53.92%), Query Frame = 0


Query: 261 DVTLLVL-DMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVI 320
           D+T  VL ++  FD I+G D L    A +D     ++  P  +     R +  + +  ++
Sbjct: 19  DITFFVLPNLHSFDGIIGDDTLKDLKAIVDRKNNCLIITPGIKIPLLARAS--INVNPLL 78

Query: 321 SAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAI 380
           +A         GT  IL S++                E+P +F   L G+     V+ A+
Sbjct: 79  AAEH-----PDGTQEILNSLLG---------------EFPRIFEPPLSGM----SVETAV 138

Query: 381 ELEPGT---APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK--- 440
           + E  T    PI    Y        E++ Q+ ELL  G IRPS SP+ +P+  V KK   
Sbjct: 139 KAEIRTNTQDPIYAKSYPYPVNMRGEVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKP 198

Query: 441 --DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGD 500
             +   R+ +D++ LN VT+ + YP+P I+     L  A  F+ +DL SG+HQ+ +++ D
Sbjct: 199 NGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESD 258

Query: 501 IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 560
           IPKTAF +  G YEF+ + FGL NAPA+F  +++ + +E +     V+IDDI+++S+   
Sbjct: 259 IPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYD 318

Query: 561 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 620
            H ++L  VL +L    L     K  F   +V FLG++V+++G+  DP K+ A++    P
Sbjct: 319 THWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPP 378

Query: 621 STVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTK 647
           ++V E++ FLG+  YYR+F++D++++A PLT LT+
Sbjct: 379 TSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTR 387

[Close]

BLAST of Cmc11g0293941 vs. ExPASy TrEMBL
Match: A0A5A7UBS1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G00110 PE=4 SV=1)

HSP 1 Score: 1283.1 bits (3319), Expect = 0.0e+00
Identity = 647/649 (99.69%), Postives = 648/649 (99.85%), Query Frame = 0


Query: 1   MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD 60
           MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD
Sbjct: 219 MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD 278

Query: 61  LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL 120
           LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL
Sbjct: 279 LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL 338

Query: 121 PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFEATPPQPSAAQQGRVFATTRQ 180
           PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFE TPPQPSAAQQGRVFATTRQ
Sbjct: 339 PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQ 398

Query: 181 EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE 240
           EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE
Sbjct: 399 EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE 458

Query: 241 VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP 300
           VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP
Sbjct: 459 VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP 518

Query: 301 SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD 360
           SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD
Sbjct: 519 SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD 578

Query: 361 VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 420
           VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV
Sbjct: 579 VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 638

Query: 421 SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 480
           SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS
Sbjct: 639 SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 698

Query: 481 GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI 540
           GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI
Sbjct: 699 GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI 758

Query: 541 DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA 600
           DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA
Sbjct: 759 DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA 818

Query: 601 KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGT 650
           KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLT+KGT
Sbjct: 819 KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGT 867

[Close]

BLAST of Cmc11g0293941 vs. ExPASy TrEMBL
Match: A0A5A7TSL0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G001340 PE=4 SV=1)

HSP 1 Score: 1283.1 bits (3319), Expect = 0.0e+00
Identity = 647/649 (99.69%), Postives = 648/649 (99.85%), Query Frame = 0


Query: 1   MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD 60
           MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD
Sbjct: 219 MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD 278

Query: 61  LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL 120
           LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL
Sbjct: 279 LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL 338

Query: 121 PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFEATPPQPSAAQQGRVFATTRQ 180
           PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFE TPPQPSAAQQGRVFATTRQ
Sbjct: 339 PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQ 398

Query: 181 EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE 240
           EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE
Sbjct: 399 EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE 458

Query: 241 VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP 300
           VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP
Sbjct: 459 VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP 518

Query: 301 SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD 360
           SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD
Sbjct: 519 SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD 578

Query: 361 VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 420
           VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV
Sbjct: 579 VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 638

Query: 421 SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 480
           SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS
Sbjct: 639 SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 698

Query: 481 GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI 540
           GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI
Sbjct: 699 GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI 758

Query: 541 DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA 600
           DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA
Sbjct: 759 DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA 818

Query: 601 KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGT 650
           KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLT+KGT
Sbjct: 819 KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGT 867

[Close]

BLAST of Cmc11g0293941 vs. ExPASy TrEMBL
Match: A0A5A7UBH7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G001510 PE=4 SV=1)

HSP 1 Score: 1283.1 bits (3319), Expect = 0.0e+00
Identity = 647/649 (99.69%), Postives = 648/649 (99.85%), Query Frame = 0


Query: 1    MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD 60
            MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD
Sbjct: 707  MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD 766

Query: 61   LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL 120
            LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL
Sbjct: 767  LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL 826

Query: 121  PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFEATPPQPSAAQQGRVFATTRQ 180
            PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFE TPPQPSAAQQGRVFATTRQ
Sbjct: 827  PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQ 886

Query: 181  EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE 240
            EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE
Sbjct: 887  EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE 946

Query: 241  VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP 300
            VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP
Sbjct: 947  VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP 1006

Query: 301  SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD 360
            SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD
Sbjct: 1007 SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD 1066

Query: 361  VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 420
            VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV
Sbjct: 1067 VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 1126

Query: 421  SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 480
            SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS
Sbjct: 1127 SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 1186

Query: 481  GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI 540
            GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI
Sbjct: 1187 GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI 1246

Query: 541  DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA 600
            DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA
Sbjct: 1247 DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA 1306

Query: 601  KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGT 650
            KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLT+KGT
Sbjct: 1307 KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGT 1355

[Close]

BLAST of Cmc11g0293941 vs. ExPASy TrEMBL
Match: A0A5A7SPM4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G001940 PE=4 SV=1)

HSP 1 Score: 1283.1 bits (3319), Expect = 0.0e+00
Identity = 647/649 (99.69%), Postives = 648/649 (99.85%), Query Frame = 0


Query: 1   MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD 60
           MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD
Sbjct: 160 MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD 219

Query: 61  LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL 120
           LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL
Sbjct: 220 LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL 279

Query: 121 PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFEATPPQPSAAQQGRVFATTRQ 180
           PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFE TPPQPSAAQQGRVFATTRQ
Sbjct: 280 PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQ 339

Query: 181 EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE 240
           EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE
Sbjct: 340 EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE 399

Query: 241 VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP 300
           VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP
Sbjct: 400 VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP 459

Query: 301 SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD 360
           SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD
Sbjct: 460 SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD 519

Query: 361 VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 420
           VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV
Sbjct: 520 VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 579

Query: 421 SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 480
           SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS
Sbjct: 580 SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 639

Query: 481 GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI 540
           GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI
Sbjct: 640 GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI 699

Query: 541 DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA 600
           DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA
Sbjct: 700 DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA 759

Query: 601 KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGT 650
           KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLT+KGT
Sbjct: 760 KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGT 808

[Close]

BLAST of Cmc11g0293941 vs. ExPASy TrEMBL
Match: A0A5A7SXB5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1735G00220 PE=4 SV=1)

HSP 1 Score: 1283.1 bits (3319), Expect = 0.0e+00
Identity = 647/649 (99.69%), Postives = 648/649 (99.85%), Query Frame = 0


Query: 1    MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD 60
            MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD
Sbjct: 824  MTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALD 883

Query: 61   LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL 120
            LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL
Sbjct: 884  LSLPERADASKAAGRGSALGQKRKVETQPDVAPQRTLRSGGVFQRHRRELAAAGRTLREL 943

Query: 121  PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFEATPPQPSAAQQGRVFATTRQ 180
            PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFE TPPQPSAAQQGRVFATTRQ
Sbjct: 944  PACTTCGRVHGGRCLAGSGVCFRCRQPGHTADMCPRKPFETTPPQPSAAQQGRVFATTRQ 1003

Query: 181  EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE 240
            EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE
Sbjct: 1004 EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVEPLGSVLSVSTPSGE 1063

Query: 241  VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP 300
            VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP
Sbjct: 1064 VLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPP 1123

Query: 301  SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD 360
            SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD
Sbjct: 1124 SEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPD 1183

Query: 361  VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 420
            VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV
Sbjct: 1184 VFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 1243

Query: 421  SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 480
            SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS
Sbjct: 1244 SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 1303

Query: 481  GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI 540
            GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI
Sbjct: 1304 GYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFI 1363

Query: 541  DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA 600
            DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA
Sbjct: 1364 DDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPA 1423

Query: 601  KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGT 650
            KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLT+KGT
Sbjct: 1424 KIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGT 1472

[Close]

BLAST of Cmc11g0293941 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 101.7 bits (252), Expect = 2.4e-21
Identity = 49/110 (44.55%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 556 HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWTRPST 615
           HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  W  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 616 VSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTLLSGAQLARGAFRS 664
            +E+R FLGL GYYRRFV+++ +I  PLT+L KK + L   ++A  AF++
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKA 111

The following BLAST results are available for this feature:

BLAST of Cmc11g0293941 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031437.1	0.0e+00	99.69	pol protein [Cucumis melo var. makuwa]	[more]
KAA0033825.1	0.0e+00	99.69	pol protein [Cucumis melo var. makuwa]	[more]
KAA0032535.1	0.0e+00	99.69	pol protein [Cucumis melo var. makuwa] >KAA0033280.1 pol protein [Cucumis melo v...	[more]
KAA0025242.1	0.0e+00	99.69	pol protein [Cucumis melo var. makuwa] >KAA0036610.1 pol protein [Cucumis melo v...	[more]
KAA0048546.1	0.0e+00	99.69	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0293941 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	7.6e-57	37.24	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	7.6e-57	37.24	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P04323	1.7e-56	40.77	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	3.8e-56	38.41	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q8I7P9	8.4e-56	32.41	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]

BLAST of Cmc11g0293941 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UBS1	0.0e+00	99.69	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7TSL0	0.0e+00	99.69	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19...	[more]
A0A5A7UBH7	0.0e+00	99.69	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60...	[more]
A0A5A7SPM4	0.0e+00	99.69	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7SXB5	0.0e+00	99.69	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17...	[more]

BLAST of Cmc11g0293941 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.4e-21	44.55	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 140..156 e-value: 0.0083 score: 24.1
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 141..156 score: 9.207683
None	No IPR available	PFAM	PF08284	RVP_2	coord: 170..300 e-value: 2.1E-41 score: 140.9
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 376..515 e-value: 1.5E-94 score: 317.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..92
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 387..647
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 387..647
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 217..281 e-value: 5.57599E-11 score: 57.3464
None	No IPR available	CDD	cd01647	RT_LTR	coord: 414..590 e-value: 2.17081E-99 score: 299.896
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 192..307 e-value: 2.7E-21 score: 77.7
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 192..289
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 600..663 e-value: 6.7E-19 score: 69.7
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 455..590 e-value: 1.5E-94 score: 317.2
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 430..589 e-value: 5.8E-28 score: 97.9
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 411..590 score: 10.536036
IPR001969	Aspartic peptidase, active site	PROSITE	PS00141	ASP_PROTEASE	coord: 202..213
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 354..660

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0293941.1	Cmc11g0293941.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding