Cmc11g0293861 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0293861
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
LocationCMiso1.1chr11: 10220858 .. 10222537 (-)
RNA-Seq ExpressionCmc11g0293861
SyntenyCmc11g0293861
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGCTAGTAGACTACTCAGCCAGGGAACTTGGGGCATCTTGGCAAGCGTAGTAGATATTAGAGAGCCAGAAGTTTCCCTATCGTCTGAACCAGTGGTGAGGGAGTACCCCGACGTTTTCCCAGACGAACTCCCAGGACTTCCGCCTCCCAGAGAAGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCTATTTTGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACCGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATTTGATGAACAGGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCGGAGCACGAGGAGCACTTACACCAGGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTTTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCTGCAAAGATTGAAGCGGTGACCAACTGGCCTCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTATCTGGAGCCCAGCATGCGAGAGTAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCAGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCTGCGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCTCGCCAGTTGAAGATTCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATCCAGATTTACACCGACCATAAGAGCCTAAAGTACTTTTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTACGACTGCGAGATCCTGTACCACCCAAGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTTAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGTCGGTTCAGCCAACCTTGAGGCAAAAGATCATCGCTGCTCAGCTGAGTGATCCTTACTTGGCAGAGAAACGTCGTATGGTAGAGACAGAGCAAGGTGAAGACTTCTCCATATCCTCTGACGATGGCCTTATGTTTTAG

mRNA sequence

ATGAAGGCTAGTAGACTACTCAGCCAGGGAACTTGGGGCATCTTGGCAAGCGTAGTAGATATTAGAGAGCCAGAAGTTTCCCTATCGTCTGAACCAGTGGTGAGGGAGTACCCCGACGTTTTCCCAGACGAACTCCCAGGACTTCCGCCTCCCAGAGAAGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCTATTTTGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACCGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATTTGATGAACAGGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCGGAGCACGAGGAGCACTTACACCAGGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTTTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCTGCAAAGATTGAAGCGGTGACCAACTGGCCTCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTATCTGGAGCCCAGCATGCGAGAGTAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCAGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCTGCGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCTCGCCAGTTGAAGATTCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATCCAGATTTACACCGACCATAAGAGCCTAAAGTACTTTTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTACGACTGCGAGATCCTGTACCACCCAAGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTTAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGTCGGTTCAGCCAACCTTGAGGCAAAAGATCATCGCTGCTCAGCTGAGTGATCCTTACTTGGCAGAGAAACGTCGTATGGTAGAGACAGAGCAAGGTGAAGACTTCTCCATATCCTCTGACGATGGCCTTATGTTTTAG

Coding sequence (CDS)

ATGAAGGCTAGTAGACTACTCAGCCAGGGAACTTGGGGCATCTTGGCAAGCGTAGTAGATATTAGAGAGCCAGAAGTTTCCCTATCGTCTGAACCAGTGGTGAGGGAGTACCCCGACGTTTTCCCAGACGAACTCCCAGGACTTCCGCCTCCCAGAGAAGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCTATTTTGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACCGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATTTGATGAACAGGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCGGAGCACGAGGAGCACTTACACCAGGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTTTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCTGCAAAGATTGAAGCGGTGACCAACTGGCCTCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTATCTGGAGCCCAGCATGCGAGAGTAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCAGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCTGCGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCTCGCCAGTTGAAGATTCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATCCAGATTTACACCGACCATAAGAGCCTAAAGTACTTTTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTACGACTGCGAGATCCTGTACCACCCAAGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTTAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGTCGGTTCAGCCAACCTTGAGGCAAAAGATCATCGCTGCTCAGCTGAGTGATCCTTACTTGGCAGAGAAACGTCGTATGGTAGAGACAGAGCAAGGTGAAGACTTCTCCATATCCTCTGACGATGGCCTTATGTTTTAG

Protein sequence

MKASRLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPILRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFIWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHLAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEDFSISSDDGLMF
Homology
[Close]
BLAST of Cmc11g0293861 vs. NCBI nr
Match: KAA0060745.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1097.0 bits (2836), Expect = 0.0e+00
Identity = 549/559 (98.21%), Postives = 553/559 (98.93%), Query Frame = 0 

Query: 1    MKASRLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
            MKAS+LLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 498  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 557

Query: 61   EPGTAPILRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            EPGTAPI RAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 558  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 617

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 618  DYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 677

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL
Sbjct: 678  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 737

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
Sbjct: 738  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 797

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFIWSPACESSFQELKQKLVTAPVLTVPDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPF+WSPACESSFQELKQKLV APVLTVPDGSG
Sbjct: 798  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVIAPVLTVPDGSG 857

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY
Sbjct: 858  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 917

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAH 480
            GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVAH
Sbjct: 918  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 977

Query: 481  LAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLSDPYLAEKRRM 540
             AALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQL+DPYLAEKRRM
Sbjct: 978  SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRM 1037

Query: 541  VETEQGEDFSISSDDGLMF 560
            VET QGEDFSIS DDGLMF
Sbjct: 1038 VETGQGEDFSISFDDGLMF 1056

[Close]
BLAST of Cmc11g0293861 vs. NCBI nr
Match: KAA0063793.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1096.3 bits (2834), Expect = 0.0e+00
Identity = 547/559 (97.85%), Postives = 554/559 (99.11%), Query Frame = 0 

Query: 1   MKASRLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
           MKAS+LLS GTWGILASVVD+REPEVSLSSEPVVREYPDVFPD+LPGLPPPREVDFAIEL
Sbjct: 64  MKASKLLSHGTWGILASVVDMREPEVSLSSEPVVREYPDVFPDKLPGLPPPREVDFAIEL 123

Query: 61  EPGTAPILRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           EPGTAPI RAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 124 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 183

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 184 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 243

Query: 181 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 240
           GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL
Sbjct: 244 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 303

Query: 241 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 300
           ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
Sbjct: 304 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 363

Query: 301 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFIWSPACESSFQELKQKLVTAPVLTVPDGSG 360
           GLAGYYRRFVEDFSRIASPLTQLTRKGTPF+WSPACE SFQELKQKLVTAPVLTVPDGSG
Sbjct: 364 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 423

Query: 361 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 420
           NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY
Sbjct: 424 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 483

Query: 421 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAH 480
           GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVAH
Sbjct: 484 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 543

Query: 481 LAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLSDPYLAEKRRM 540
            AALITKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYLAEKRR+
Sbjct: 544 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRV 603

Query: 541 VETEQGEDFSISSDDGLMF 560
           VETEQGEDFSISSDDGLMF
Sbjct: 604 VETEQGEDFSISSDDGLMF 622

[Close]
BLAST of Cmc11g0293861 vs. NCBI nr
Match: TYK20443.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1094.3 bits (2829), Expect = 0.0e+00
Identity = 547/559 (97.85%), Postives = 552/559 (98.75%), Query Frame = 0 

Query: 1    MKASRLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
            MKAS+LLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 862  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 921

Query: 61   EPGTAPILRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            EPGTAPI RAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 922  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 981

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 982  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 1041

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL
Sbjct: 1042 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 1101

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFL
Sbjct: 1102 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 1161

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFIWSPACESSFQELKQKLVTAPVLTVPDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPF+WSPACE SFQELKQKLVTAPVLTVPDGSG
Sbjct: 1162 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 1221

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY
Sbjct: 1222 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 1281

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAH 480
            GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVAH
Sbjct: 1282 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1341

Query: 481  LAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLSDPYLAEKRRM 540
             AALITKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL DPYLAEKRR+
Sbjct: 1342 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRV 1401

Query: 541  VETEQGEDFSISSDDGLMF 560
            VETEQGE FSISSDDGLMF
Sbjct: 1402 VETEQGEGFSISSDDGLMF 1420

[Close]
BLAST of Cmc11g0293861 vs. NCBI nr
Match: KAA0025998.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1094.3 bits (2829), Expect = 0.0e+00
Identity = 547/559 (97.85%), Postives = 552/559 (98.75%), Query Frame = 0 

Query: 1    MKASRLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
            MKAS+LLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 526  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 585

Query: 61   EPGTAPILRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            EPGTAPI RAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 586  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 645

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 646  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 705

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL
Sbjct: 706  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 765

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFL
Sbjct: 766  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 825

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFIWSPACESSFQELKQKLVTAPVLTVPDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPF+WSPACE SFQELKQKLVTAPVLTVPDGSG
Sbjct: 826  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 885

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY
Sbjct: 886  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 945

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAH 480
            GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVAH
Sbjct: 946  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1005

Query: 481  LAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLSDPYLAEKRRM 540
             AALITKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL DPYLAEKRR+
Sbjct: 1006 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRV 1065

Query: 541  VETEQGEDFSISSDDGLMF 560
            VETEQGE FSISSDDGLMF
Sbjct: 1066 VETEQGEGFSISSDDGLMF 1084

[Close]
BLAST of Cmc11g0293861 vs. NCBI nr
Match: TYK01576.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1094.3 bits (2829), Expect = 0.0e+00
Identity = 547/559 (97.85%), Postives = 552/559 (98.75%), Query Frame = 0 

Query: 1    MKASRLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
            MKAS+LLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 863  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 922

Query: 61   EPGTAPILRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            EPGTAPI RAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 923  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 982

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 983  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 1042

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL
Sbjct: 1043 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 1102

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFL
Sbjct: 1103 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 1162

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFIWSPACESSFQELKQKLVTAPVLTVPDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPF+WSPACE SFQELKQKLVTAPVLTVPDGSG
Sbjct: 1163 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 1222

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY
Sbjct: 1223 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 1282

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAH 480
            GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVAH
Sbjct: 1283 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1342

Query: 481  LAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLSDPYLAEKRRM 540
             AALITKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL DPYLAEKRR+
Sbjct: 1343 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRV 1402

Query: 541  VETEQGEDFSISSDDGLMF 560
            VETEQGE FSISSDDGLMF
Sbjct: 1403 VETEQGEGFSISSDDGLMF 1421

[Close]
BLAST of Cmc11g0293861 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 9.8e-90
Identity = 167/415 (40.24%), Postives = 259/415 (62.41%), Query Frame = 0 

Query: 68  LRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDY 127
           L + Y    A  +E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ IDY
Sbjct: 209 LYSKYSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDY 268

Query: 128 RELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGH 187
           R+LN++TV +R+P+P +D++  +L     F+ IDL  G+HQ+ +    + KTAF +++GH
Sbjct: 269 RKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGH 328

Query: 188 YEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLET 247
           YE++ M FGL NAPA F   MN + +  L+   +V++DDI+++S +  EH + L  V E 
Sbjct: 329 YEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEK 388

Query: 248 LRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGL 307
           L    L  +  KCEF  ++ TFLGHV++ +G+  +P KIEA+  +P P+   EI++FLGL
Sbjct: 389 LAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGL 448

Query: 308 AGYYRRFVEDFSRIASPLTQLTRKGTPF-IWSPACESSFQELKQKLVTAPVLTVPDGSGN 367
            GYYR+F+ +F+ IA P+T+  +K       +P  +S+F++LK  +   P+L VPD +  
Sbjct: 449 TGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKK 508

Query: 368 FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG 427
           F + +DAS   LG VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G
Sbjct: 509 FTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLG 568

Query: 428 EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSR 477
              +I +DH+ L + +  K+ N +  RW   + ++D +I Y   K N VADALSR
Sbjct: 569 RHFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR 623

[Close]
BLAST of Cmc11g0293861 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 6.6e-86
Identity = 163/419 (38.90%), Postives = 251/419 (59.90%), Query Frame = 0 

Query: 65  APILRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLC 124
           +PI    Y +A     E++ Q+QE+L++G IR S SP+ +P   V KK         R+ 
Sbjct: 205 SPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVV 264

Query: 125 IDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSR 184
           IDYR+LN++T+ +RYP+P +D++  +L     F+ IDL  G+HQ+ + +  I KTAF ++
Sbjct: 265 IDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTK 324

Query: 185 YGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQV 244
            GHYE++ M FGL NAPA F   MN + +  L+   +V++DDI+I+S +  EH   +  V
Sbjct: 325 SGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLV 384

Query: 245 LETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSF 304
              L    L  +  KCEF  ++  FLGH+V+ +G+  +P K++A+ ++P P+   EIR+F
Sbjct: 385 FTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAF 444

Query: 305 LGLAGYYRRFVEDFSRIASPLTQLTRKGTPFIWSPACE--SSFQELKQKLVTAPVLTVPD 364
           LGL GYYR+F+ +++ IA P+T   +K T  I +   E   +F++LK  ++  P+L +PD
Sbjct: 445 LGLTGYYRKFIPNYADIAKPMTSCLKKRTK-IDTQKLEYIEAFEKLKALIIRDPILQLPD 504

Query: 365 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 424
               FV+ +DAS   LG VL Q G  +++ SR L  HE NY   + EL A+V+A K +RH
Sbjct: 505 FEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRH 564

Query: 425 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSR 477
           YL G +  I +DH+ L++    KE   +  RW   + +Y  +I Y   K N VADALSR
Sbjct: 565 YLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

[Close]
BLAST of Cmc11g0293861 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 3.6e-84
Identity = 169/475 (35.58%), Postives = 270/475 (56.84%), Query Frame = 0 

Query: 36  EYPDVFPDELPGLPPPREVDFAIELEPGT---APILRAPYRMAPAELKELKVQLQELLDK 95
           E+P +F   L G+     V+ A++ E  T    PI    Y        E++ Q+ ELL  
Sbjct: 94  EFPRIFEPPLSGM----SVETAVKAEIRTNTQDPIYAKSYPYPVNMRGEVERQIDELLQD 153

Query: 96  GFIRPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQ 155
           G IRPS SP+ +P+  V KK     +   R+ +D++ LN VT+ + YP+P I+     L 
Sbjct: 154 GIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLG 213

Query: 156 GATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVF 215
            A  F+ +DL SG+HQ+ +++ DIPKTAF +  G YEF+ + FGL NAPA+F  +++ + 
Sbjct: 214 NAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDIL 273

Query: 216 KDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGH 275
           ++ +     V+IDDI+++S+    H ++L  VL +L    L     K  F   +V FLG+
Sbjct: 274 REHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGY 333

Query: 276 VVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTR-- 335
           +V+++G+  DP K+ A++  P P++V E++ FLG+  YYR+F++D++++A PLT LTR  
Sbjct: 334 IVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGL 393

Query: 336 ---------KGTPFIWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCV 395
                       P         SF +LK  L ++ +L  P  +  F + +DAS   +G V
Sbjct: 394 YANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGAV 453

Query: 396 LMQ----QGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGE-KIQIYTDHK 455
           L Q    + + +AY SR L   E+NY T + E+ A++++L   R YLYG   I++YTDH+
Sbjct: 454 LSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQ 513

Query: 456 SLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAHLAALIT 487
            L +    +  N + +RW   +++Y+CE++Y P K+NVVADALSR    L  L T
Sbjct: 514 PLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGKSNVVADALSRIPPQLNQLST 564

[Close]
BLAST of Cmc11g0293861 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 310.5 bits (794), Expect = 4.0e-83
Identity = 180/497 (36.22%), Postives = 275/497 (55.33%), Query Frame = 0 

Query: 2    KASRLLSQGTWGILASVVDIREPEVSLSSEP---------VVREYPDVFPDELPGLPPPR 61
            +AS L   G +  + S +   EP  +  S           + ++Y ++  ++LP  P P 
Sbjct: 520  EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLP--PRPA 579

Query: 62   EVD-----FAIELEPGTAPILRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVL 121
            +++       IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+
Sbjct: 580  DINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVV 639

Query: 122  FVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIR 181
             V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ + 
Sbjct: 640  LVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPME 699

Query: 182  DGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSK 241
              D  KTAF +  G YE+ VM FGL NAP+ F   M   F+D    FV V++DDILI+S+
Sbjct: 700  PKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSE 759

Query: 242  TEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW 301
            +  EH +HL  VLE L+   L  K  KC+F   +  FLG+ +  + ++    K  A+ ++
Sbjct: 760  SPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDF 819

Query: 302  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFIWSPACESSFQELKQKL 361
            P P TV + + FLG+  YYRRF+ + S+IA P+       +   W+   + +  +LK  L
Sbjct: 820  PTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQ--WTEKQDKAIDKLKDAL 879

Query: 362  VTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKIHEQNYPTH 421
              +PVL   +   N+ + +DASK G+G VL +         VV Y S+ L+  ++NYP  
Sbjct: 880  CNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAG 939

Query: 422  DLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEIL 479
            +LEL  ++ AL  +R+ L+G+   + TDH SL     + E   R +RWL+ +  YD  + 
Sbjct: 940  ELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLE 999

[Close]
BLAST of Cmc11g0293861 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 310.5 bits (794), Expect = 4.0e-83
Identity = 179/497 (36.02%), Postives = 276/497 (55.53%), Query Frame = 0 

Query: 2    KASRLLSQGTWGILASVVDIREPEVSLSSEP---------VVREYPDVFPDELPGLPPPR 61
            +AS L   G +  + S +   EP  +  S           + ++Y ++  ++LP  P P 
Sbjct: 546  EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLP--PRPA 605

Query: 62   EVD-----FAIELEPGTAPILRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVL 121
            +++       IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+
Sbjct: 606  DINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVV 665

Query: 122  FVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIR 181
             V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ + 
Sbjct: 666  LVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPME 725

Query: 182  DGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSK 241
              D  KTAF +  G YE+ VM FGL NAP+ F   M   F+D    FV V++DDILI+S+
Sbjct: 726  PKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSE 785

Query: 242  TEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW 301
            +  EH +HL  VLE L+   L  K  KC+F   +  FLG+ +  + ++    K  A+ ++
Sbjct: 786  SPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDF 845

Query: 302  PRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFIWSPACESSFQELKQKL 361
            P P TV + + FLG+  YYRRF+ + S+IA P+       +   W+   + + ++LK  L
Sbjct: 846  PTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQ--WTEKQDKAIEKLKAAL 905

Query: 362  VTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKIHEQNYPTH 421
              +PVL   +   N+ + +DASK G+G VL +         VV Y S+ L+  ++NYP  
Sbjct: 906  CNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAG 965

Query: 422  DLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEIL 479
            +LEL  ++ AL  +R+ L+G+   + TDH SL     + E   R +RWL+ +  YD  + 
Sbjct: 966  ELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLE 1025

[Close]
BLAST of Cmc11g0293861 vs. ExPASy TrEMBL
Match: A0A5A7V4E4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00400 PE=4 SV=1)

HSP 1 Score: 1097.0 bits (2836), Expect = 0.0e+00
Identity = 549/559 (98.21%), Postives = 553/559 (98.93%), Query Frame = 0 

Query: 1    MKASRLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
            MKAS+LLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 498  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 557

Query: 61   EPGTAPILRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            EPGTAPI RAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 558  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 617

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 618  DYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 677

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL
Sbjct: 678  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 737

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
Sbjct: 738  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 797

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFIWSPACESSFQELKQKLVTAPVLTVPDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPF+WSPACESSFQELKQKLV APVLTVPDGSG
Sbjct: 798  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVIAPVLTVPDGSG 857

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY
Sbjct: 858  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 917

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAH 480
            GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVAH
Sbjct: 918  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 977

Query: 481  LAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLSDPYLAEKRRM 540
             AALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQL+DPYLAEKRRM
Sbjct: 978  SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRM 1037

Query: 541  VETEQGEDFSISSDDGLMF 560
            VET QGEDFSIS DDGLMF
Sbjct: 1038 VETGQGEDFSISFDDGLMF 1056

[Close]
BLAST of Cmc11g0293861 vs. ExPASy TrEMBL
Match: A0A5A7V6R2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00070 PE=4 SV=1)

HSP 1 Score: 1096.3 bits (2834), Expect = 0.0e+00
Identity = 547/559 (97.85%), Postives = 554/559 (99.11%), Query Frame = 0 

Query: 1   MKASRLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
           MKAS+LLS GTWGILASVVD+REPEVSLSSEPVVREYPDVFPD+LPGLPPPREVDFAIEL
Sbjct: 64  MKASKLLSHGTWGILASVVDMREPEVSLSSEPVVREYPDVFPDKLPGLPPPREVDFAIEL 123

Query: 61  EPGTAPILRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           EPGTAPI RAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 124 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 183

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 184 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 243

Query: 181 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 240
           GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL
Sbjct: 244 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 303

Query: 241 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 300
           ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL
Sbjct: 304 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 363

Query: 301 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFIWSPACESSFQELKQKLVTAPVLTVPDGSG 360
           GLAGYYRRFVEDFSRIASPLTQLTRKGTPF+WSPACE SFQELKQKLVTAPVLTVPDGSG
Sbjct: 364 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 423

Query: 361 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 420
           NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY
Sbjct: 424 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 483

Query: 421 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAH 480
           GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVAH
Sbjct: 484 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 543

Query: 481 LAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLSDPYLAEKRRM 540
            AALITKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYLAEKRR+
Sbjct: 544 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRV 603

Query: 541 VETEQGEDFSISSDDGLMF 560
           VETEQGEDFSISSDDGLMF
Sbjct: 604 VETEQGEDFSISSDDGLMF 622

[Close]
BLAST of Cmc11g0293861 vs. ExPASy TrEMBL
Match: A0A5D3BTN0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001560 PE=4 SV=1)

HSP 1 Score: 1094.3 bits (2829), Expect = 0.0e+00
Identity = 547/559 (97.85%), Postives = 552/559 (98.75%), Query Frame = 0 

Query: 1    MKASRLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
            MKAS+LLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 863  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 922

Query: 61   EPGTAPILRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            EPGTAPI RAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 923  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 982

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 983  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 1042

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL
Sbjct: 1043 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 1102

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFL
Sbjct: 1103 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 1162

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFIWSPACESSFQELKQKLVTAPVLTVPDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPF+WSPACE SFQELKQKLVTAPVLTVPDGSG
Sbjct: 1163 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 1222

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY
Sbjct: 1223 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 1282

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAH 480
            GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVAH
Sbjct: 1283 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1342

Query: 481  LAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLSDPYLAEKRRM 540
             AALITKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL DPYLAEKRR+
Sbjct: 1343 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRV 1402

Query: 541  VETEQGEDFSISSDDGLMF 560
            VETEQGE FSISSDDGLMF
Sbjct: 1403 VETEQGEGFSISSDDGLMF 1421

[Close]
BLAST of Cmc11g0293861 vs. ExPASy TrEMBL
Match: A0A5A7SIJ5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003210 PE=4 SV=1)

HSP 1 Score: 1094.3 bits (2829), Expect = 0.0e+00
Identity = 547/559 (97.85%), Postives = 552/559 (98.75%), Query Frame = 0 

Query: 1    MKASRLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
            MKAS+LLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 526  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 585

Query: 61   EPGTAPILRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            EPGTAPI RAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 586  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 645

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 646  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 705

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL
Sbjct: 706  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 765

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFL
Sbjct: 766  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 825

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFIWSPACESSFQELKQKLVTAPVLTVPDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPF+WSPACE SFQELKQKLVTAPVLTVPDGSG
Sbjct: 826  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 885

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY
Sbjct: 886  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 945

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAH 480
            GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVAH
Sbjct: 946  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1005

Query: 481  LAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLSDPYLAEKRRM 540
             AALITKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL DPYLAEKRR+
Sbjct: 1006 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRV 1065

Query: 541  VETEQGEDFSISSDDGLMF 560
            VETEQGE FSISSDDGLMF
Sbjct: 1066 VETEQGEGFSISSDDGLMF 1084

[Close]
BLAST of Cmc11g0293861 vs. ExPASy TrEMBL
Match: A0A5D3C6W3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001930 PE=4 SV=1)

HSP 1 Score: 1094.3 bits (2829), Expect = 0.0e+00
Identity = 547/559 (97.85%), Postives = 552/559 (98.75%), Query Frame = 0 

Query: 1    MKASRLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
            MKAS+LLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 481  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 540

Query: 61   EPGTAPILRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            EPGTAPI RAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 541  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 600

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 601  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 660

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL
Sbjct: 661  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 720

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIRSFL
Sbjct: 721  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 780

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFIWSPACESSFQELKQKLVTAPVLTVPDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPF+WSPACE SFQELKQKLVTAPVLTVPDGSG
Sbjct: 781  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 840

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY
Sbjct: 841  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 900

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALSRKVAH 480
            GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVAH
Sbjct: 901  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 960

Query: 481  LAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLSDPYLAEKRRM 540
             AALITKQTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL DPYLAEKRR+
Sbjct: 961  SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRV 1020

Query: 541  VETEQGEDFSISSDDGLMF 560
            VETEQGE FSISSDDGLMF
Sbjct: 1021 VETEQGEGFSISSDDGLMF 1039

[Close]
BLAST of Cmc11g0293861 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 119.4 bits (298), Expect = 9.2e-27
Identity = 55/125 (44.00%), Postives = 79/125 (63.20%), Query Frame = 0 

Query: 235 HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWPRPST 294
           HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 295 VSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFIWSPACESSFQELKQKLVTAPV 354
            +E+R FLGL GYYRRFV+++ +I  PLT+L +K +   W+     +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 355 LTVPD 358
           L +PD
Sbjct: 123 LALPD 126

The following BLAST results are available for this feature:
BLAST of Cmc11g0293861 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0060745.10.0e+0098.21pol protein [Cucumis melo var. makuwa][more]
KAA0063793.10.0e+0097.85pol protein [Cucumis melo var. makuwa][more]
TYK20443.10.0e+0097.85pol protein [Cucumis melo var. makuwa][more]
KAA0025998.10.0e+0097.85pol protein [Cucumis melo var. makuwa][more]
TYK01576.10.0e+0097.85pol protein [Cucumis melo var. makuwa][more]
BLAST of Cmc11g0293861 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P043239.8e-9040.24Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
P208256.6e-8638.90Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... [more]
Q8I7P93.6e-8435.58Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... [more]
Q993154.0e-8336.22Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Q7LHG54.0e-8336.02Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
BLAST of Cmc11g0293861 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V4E40.0e+0098.21Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72... [more]
A0A5A7V6R20.0e+0097.85Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82... [more]
A0A5D3BTN00.0e+0097.85Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45... [more]
A0A5A7SIJ50.0e+0097.85Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34... [more]
A0A5D3C6W30.0e+0097.85Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13... [more]
BLAST of Cmc11g0293861 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00860.19.2e-2744.00DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 55..194
e-value: 2.7E-94
score: 316.4
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 66..472
NoneNo IPR availablePANTHERPTHR24559:SF324TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEINcoord: 66..472
NoneNo IPR availableCDDcd01647RT_LTRcoord: 93..269
e-value: 2.46358E-99
score: 296.814
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 363..478
e-value: 4.22009E-58
score: 187.7
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 279..365
e-value: 1.1E-32
score: 113.9
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 134..269
e-value: 2.7E-94
score: 316.4
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 366..487
e-value: 3.7E-5
score: 25.5
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 360..456
e-value: 5.6E-34
score: 116.6
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 109..268
e-value: 4.9E-28
score: 98.2
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 90..269
score: 10.310547
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 33..462

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0293861.1Cmc11g0293861.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding