Cmc11g0293621 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0293621
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Vascular-related unknown protein 1
Location	CMiso1.1chr11: 9863308 .. 9864414 (-)
RNA-Seq Expression	Cmc11g0293621
Synteny	Cmc11g0293621

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCTCTTCCTATAAACTCTCTCCCTTTTTCTTTGCCCCCCAACTCCTCCAAACTTCATTTTATTGGAAGACCCCTCCCAATTTTCTAATCTCTCTTTAAAAAATCCTTAAAAATTATCAATGGAGAAATCTGTTTATTCATCCGCCCAACAATTCCCTCACCCATTGCCTTCCTTTCCCAGCTCCGCCGTGGAAAGCGGTTGGACTGCCTATTTGGACAACCCCTCCGACGATGACACCAACACTTACCCCACCTCCTCCTTGCTCTCTGACGCCGCTTCTCACGCTGTCGCTGCCGCCCATCCTCCAACTACGCTCACCAACCACCTCAAAATCCCAACCAAGTTGATTCTCAAGCCTAAACAACCACACTTTTTTGTTGATACTTCTCTTGAAGATACTGCCAGTTCTCCTGATAATAGCCCCAAGGTCAAGAAATTCTTTTTTTTTTTTTGTTCTTTCTTCTTTAATTTAAGACAATTTTTTTTTATTATTTAAATTATTGCTATGTATAGGTTGGTGATCATTTGGGGCCGTTCGATGGGAATCATTATCGGAGAAAGAGTTCACTGGTATTTTATTAGAAAAATTATTTCATTTATCATCAAAGAATTAATTAAGGTTATAATTAATTTATTTACGGAGATTTGTTTGTTTTATGTATGGGGCAGGGAAATGGAGAGAAATATAGAGATCATGAAAGAAGATTGGAGATAGGTTTTAAAAGGAAGGCTTCTGAATACACAGACTTGAAGAAAAGAGGATTGTGTTTGGTTCCTTTGTCCATGCTCACAAATTACTTGGATTGAAAATTTGGTATACGAGAAGCATATATAGTTCGGTAAATAAGATATATATACTTGATATTATCGATATTCCACATCACTTCCCTTCATTGATATTAGATGTCTCGCCTCATATATAATTGTCGGGGTGTCAAATTCTAAAAAGGAACAAAAATTTGTATATGATAGTAAAAGTTTTAGTCTTTGTAACTAGTGACCTGCCTAATTTGGGTAATGTTACAAGCACGGGCTTTGTGGCCGGCTTAATATGTAAAATTGTAAATTTAATTGTAAGTTAATTTACTTACTAAGTTAACTATT

mRNA sequence

TTTTCTCTTCCTATAAACTCTCTCCCTTTTTCTTTGCCCCCCAACTCCTCCAAACTTCATTTTATTGGAAGACCCCTCCCAATTTTCTAATCTCTCTTTAAAAAATCCTTAAAAATTATCAATGGAGAAATCTGTTTATTCATCCGCCCAACAATTCCCTCACCCATTGCCTTCCTTTCCCAGCTCCGCCGTGGAAAGCGGTTGGACTGCCTATTTGGACAACCCCTCCGACGATGACACCAACACTTACCCCACCTCCTCCTTGCTCTCTGACGCCGCTTCTCACGCTGTCGCTGCCGCCCATCCTCCAACTACGCTCACCAACCACCTCAAAATCCCAACCAAGTTGATTCTCAAGCCTAAACAACCACACTTTTTTGTTGATACTTCTCTTGAAGATACTGCCAGTTCTCCTGATAATAGCCCCAAGGTTGGTGATCATTTGGGGCCGTTCGATGGGAATCATTATCGGAGAAAGAGTTCACTGGGAAATGGAGAGAAATATAGAGATCATGAAAGAAGATTGGAGATAGGTTTTAAAAGGAAGGCTTCTGAATACACAGACTTGAAGAAAAGAGGATTGTGTTTGGTTCCTTTGTCCATGCTCACAAATTACTTGGATTGAAAATTTGGTATACGAGAAGCATATATAGTTCGGTAAATAAGATATATATACTTGATATTATCGATATTCCACATCACTTCCCTTCATTGATATTAGATGTCTCGCCTCATATATAATTGTCGGGGTGTCAAATTCTAAAAAGGAACAAAAATTTGTATATGATAGTAAAAGTTTTAGTCTTTGTAACTAGTGACCTGCCTAATTTGGGTAATGTTACAAGCACGGGCTTTGTGGCCGGCTTAATATGTAAAATTGTAAATTTAATTGTAAGTTAATTTACTTACTAAGTTAACTATT

Coding sequence (CDS)

ATGGAGAAATCTGTTTATTCATCCGCCCAACAATTCCCTCACCCATTGCCTTCCTTTCCCAGCTCCGCCGTGGAAAGCGGTTGGACTGCCTATTTGGACAACCCCTCCGACGATGACACCAACACTTACCCCACCTCCTCCTTGCTCTCTGACGCCGCTTCTCACGCTGTCGCTGCCGCCCATCCTCCAACTACGCTCACCAACCACCTCAAAATCCCAACCAAGTTGATTCTCAAGCCTAAACAACCACACTTTTTTGTTGATACTTCTCTTGAAGATACTGCCAGTTCTCCTGATAATAGCCCCAAGGTTGGTGATCATTTGGGGCCGTTCGATGGGAATCATTATCGGAGAAAGAGTTCACTGGGAAATGGAGAGAAATATAGAGATCATGAAAGAAGATTGGAGATAGGTTTTAAAAGGAAGGCTTCTGAATACACAGACTTGAAGAAAAGAGGATTGTGTTTGGTTCCTTTGTCCATGCTCACAAATTACTTGGATTGA

Protein sequence

MEKSVYSSAQQFPHPLPSFPSSAVESGWTAYLDNPSDDDTNTYPTSSLLSDAASHAVAAAHPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKSSLGNGEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYLD

Homology

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BLAST of Cmc11g0293621 vs. NCBI nr
Match: KAA0043428.1 (uncharacterized protein E6C27_scaffold1639G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 337.8 bits (865), Expect = 5.3e-89
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MEKSVYSSAQQFPHPLPSFPSSAVESGWTAYLDNPSDDDTNTYPTSSLLSDAASHAVAAA 60
           MEKSVYSSAQQFPHPLPSFPSSAVESGWTAYLDNPSDDDTNTYPTSSLLSDAASHAVAAA
Sbjct: 1   MEKSVYSSAQQFPHPLPSFPSSAVESGWTAYLDNPSDDDTNTYPTSSLLSDAASHAVAAA 60

Query: 61  HPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS 120
           HPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS
Sbjct: 61  HPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS 120

Query: 121 SLGNGEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYLD 168
           SLGNGEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYLD
Sbjct: 121 SLGNGEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYLD 167

[Close]

BLAST of Cmc11g0293621 vs. NCBI nr
Match: XP_008455849.1 (PREDICTED: uncharacterized protein LOC103495948 [Cucumis melo] >TYK00183.1 uncharacterized protein E5676_scaffold1452G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 336.3 bits (861), Expect = 1.5e-88
Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MEKSVYSSAQQFPHPLPSFPSSAVESGWTAYLDNPSDDDTNTYPTSSLLSDAASHAVAAA 60
           MEKSVYSSAQQFPHPLPSFPSSAVESGWTAYLDNPSDDDTNT+PTSSLLSDAASHAVAAA
Sbjct: 1   MEKSVYSSAQQFPHPLPSFPSSAVESGWTAYLDNPSDDDTNTFPTSSLLSDAASHAVAAA 60

Query: 61  HPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS 120
           HPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS
Sbjct: 61  HPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS 120

Query: 121 SLGNGEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYLD 168
           SLGNGEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYLD
Sbjct: 121 SLGNGEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYLD 167

[Close]

BLAST of Cmc11g0293621 vs. NCBI nr
Match: XP_011650013.1 (vascular-related unknown protein 1 [Cucumis sativus] >KGN63264.1 hypothetical protein Csa_022464 [Cucumis sativus])

HSP 1 Score: 319.3 bits (817), Expect = 2.0e-83
Identity = 158/167 (94.61%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MEKSVYSSAQQFPHPLPSFPSSAVESGWTAYLDNPSDDDTNTYPTSSLLSDAASHAVAAA 60
           MEKSVYSSAQQFPHPLPSFPSSA+ESGWTAYLD+PSDDDTNT+PTSSLLSDAASHAVAAA
Sbjct: 1   MEKSVYSSAQQFPHPLPSFPSSALESGWTAYLDSPSDDDTNTFPTSSLLSDAASHAVAAA 60

Query: 61  HPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS 120
            PPT LTNHL+ PTKLILKPKQPH FVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS
Sbjct: 61  LPPTPLTNHLRFPTKLILKPKQPHLFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS 120

Query: 121 SLGNGEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYLD 168
           SLGNGEKYRDHERRLEI FKRKASEYTDLKKRGLCLVPLSMLTNYLD
Sbjct: 121 SLGNGEKYRDHERRLEISFKRKASEYTDLKKRGLCLVPLSMLTNYLD 167

[Close]

BLAST of Cmc11g0293621 vs. NCBI nr
Match: XP_038902043.1 (vascular-related unknown protein 1-like [Benincasa hispida])

HSP 1 Score: 255.4 bits (651), Expect = 3.5e-64
Identity = 141/175 (80.57%), Postives = 150/175 (85.71%), Query Frame = 0


Query: 1   MEKSVYSSAQ-QFPHPLPSF-PSSAVESGWTAYLDNPS-DDDTNTYPTSSLLSDAASHAV 60
           MEKSVYSS   QFPHPLPSF  S+A ESGWTAYLD+PS DDDT T+PTSSLLSDAASHA 
Sbjct: 1   MEKSVYSSTNPQFPHPLPSFSTSAAAESGWTAYLDDPSDDDDTYTFPTSSLLSDAASHAA 60

Query: 61  -----AAAHPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFD 120
                AAA PP  LT+HLKI TKLILKPKQ HFFVD SLEDTASSPDNSPKVG HLGPFD
Sbjct: 61  CKFSPAAADPPPPLTDHLKISTKLILKPKQTHFFVDASLEDTASSPDNSPKVG-HLGPFD 120

Query: 121 GNHYRRKSSLGNGEKYR-DHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYL 167
           GN+YRRKSSLGNG+KYR DHER LE+ FKRKA+EYTDLKKRGLCLVPLSM TNY+
Sbjct: 121 GNNYRRKSSLGNGKKYRGDHERNLEMSFKRKATEYTDLKKRGLCLVPLSMFTNYM 174

[Close]

BLAST of Cmc11g0293621 vs. NCBI nr
Match: KAG7034965.1 (hypothetical protein SDJN02_01758, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 203.8 bits (517), Expect = 1.2e-48
Identity = 123/176 (69.89%), Postives = 130/176 (73.86%), Query Frame = 0


Query: 1   MEKSVYSSAQQFPHPLPSFPSSAV-----ESGWTAYLDNPSDDDTNTYPTSSLLSDAASH 60
           MEKSV SS QQFPHPLPSF SS+      ES WTAYLD+PS DD  +  TSSLLSDAASH
Sbjct: 1   MEKSVNSSIQQFPHPLPSFSSSSAATAVEESAWTAYLDDPS-DDAYSLATSSLLSDAASH 60

Query: 61  AV-AAAHPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGN 120
           A    + PP  L++HLKIP KL LKPK   FFVDTSLEDTASSPDNSPKV D  GPFDGN
Sbjct: 61  AAYKLSAPPPPLSDHLKIPKKLSLKPK-AQFFVDTSLEDTASSPDNSPKVAD-FGPFDGN 120

Query: 121 HYRRKSSLGN----GEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYL 167
           +YRRKSSLGN    GEKYRDHE         K  EYTDLKKRGLCLVPLSML NYL
Sbjct: 121 NYRRKSSLGNGRKMGEKYRDHE--------MKTHEYTDLKKRGLCLVPLSMLANYL 165

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BLAST of Cmc11g0293621 vs. ExPASy Swiss-Prot
Match: Q9LSZ3 (Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.3e-09
Identity = 59/176 (33.52%), Postives = 84/176 (47.73%), Query Frame = 0


Query: 25  ESGWTAYLDNPSD------------DDTNTY----PTSSLLSDAASHAVAAAHPPTTLTN 84
           ESGWT YLD+ S+             D ++Y     ++SL+SDAA+HA +    P     
Sbjct: 37  ESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHAFSGKSFPVNFPA 96

Query: 85  HLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVG--DHL--GPFDGNHYRRKS-SLG 144
            LK       + +      D SLEDTASSP NSPKV   +H+   P     Y   S  +G
Sbjct: 97  KLKFG-----RGRTKKICEDDSLEDTASSPVNSPKVSHFEHIQTPPRKIEDYVSSSFVMG 156

Query: 145 NGEKYRDHERRLEIGFKRKA--------------SEYTDLKKRGLCLVPLSMLTNY 166
           N     DH+ +++ G ++K               +   DL+ RGLC+VP+SML N+
Sbjct: 157 NIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNNNNNNMDLRSRGLCVVPISMLANF 207

[Close]

BLAST of Cmc11g0293621 vs. ExPASy Swiss-Prot
Match: Q5BPG5 (Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.7e-05
Identity = 51/171 (29.82%), Postives = 75/171 (43.86%), Query Frame = 0


Query: 1   MEKSVYSSAQQFPHPLPSF--PSSAVESGWTAYLDNPSDDDTNTYPTSSLLSDAASHAVA 60
           ME S+ ++     H    F    +  ES WT Y ++  +  ++        S + S A +
Sbjct: 1   MESSMNNAFIMSKHETAMFTDDQNPEESSWTMYFEDFFEASSSIVDVGDFSSSSVSDAAS 60

Query: 61  AAHPPTTLTNHLKIPTKLILK---PKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNH 120
                 TL    +  + L +K    ++  F     LEDTASSP  SP V   +   D N 
Sbjct: 61  FVATKKTLNVSKQEGSNLDIKRTRNREIPFGRHHDLEDTASSPSGSPNVYSMMNLQDNNT 120

Query: 121 YRRKSSLGNGEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYL 167
                 +G      D E+R+      +     DLKK+GLCLVPLSM+TN+L
Sbjct: 121 RHGGGIVG------DDEKRVS-AVPNQGGLPIDLKKKGLCLVPLSMVTNFL 164

[Close]

BLAST of Cmc11g0293621 vs. ExPASy TrEMBL
Match: A0A5A7TKT4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1639G00370 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 2.6e-89
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MEKSVYSSAQQFPHPLPSFPSSAVESGWTAYLDNPSDDDTNTYPTSSLLSDAASHAVAAA 60
           MEKSVYSSAQQFPHPLPSFPSSAVESGWTAYLDNPSDDDTNTYPTSSLLSDAASHAVAAA
Sbjct: 1   MEKSVYSSAQQFPHPLPSFPSSAVESGWTAYLDNPSDDDTNTYPTSSLLSDAASHAVAAA 60

Query: 61  HPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS 120
           HPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS
Sbjct: 61  HPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS 120

Query: 121 SLGNGEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYLD 168
           SLGNGEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYLD
Sbjct: 121 SLGNGEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYLD 167

[Close]

BLAST of Cmc11g0293621 vs. ExPASy TrEMBL
Match: A0A5D3BK94 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1452G00090 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 7.5e-89
Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MEKSVYSSAQQFPHPLPSFPSSAVESGWTAYLDNPSDDDTNTYPTSSLLSDAASHAVAAA 60
           MEKSVYSSAQQFPHPLPSFPSSAVESGWTAYLDNPSDDDTNT+PTSSLLSDAASHAVAAA
Sbjct: 1   MEKSVYSSAQQFPHPLPSFPSSAVESGWTAYLDNPSDDDTNTFPTSSLLSDAASHAVAAA 60

Query: 61  HPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS 120
           HPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS
Sbjct: 61  HPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS 120

Query: 121 SLGNGEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYLD 168
           SLGNGEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYLD
Sbjct: 121 SLGNGEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYLD 167

[Close]

BLAST of Cmc11g0293621 vs. ExPASy TrEMBL
Match: A0A1S3C201 (uncharacterized protein LOC103495948 OS=Cucumis melo OX=3656 GN=LOC103495948 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 7.5e-89
Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MEKSVYSSAQQFPHPLPSFPSSAVESGWTAYLDNPSDDDTNTYPTSSLLSDAASHAVAAA 60
           MEKSVYSSAQQFPHPLPSFPSSAVESGWTAYLDNPSDDDTNT+PTSSLLSDAASHAVAAA
Sbjct: 1   MEKSVYSSAQQFPHPLPSFPSSAVESGWTAYLDNPSDDDTNTFPTSSLLSDAASHAVAAA 60

Query: 61  HPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS 120
           HPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS
Sbjct: 61  HPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS 120

Query: 121 SLGNGEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYLD 168
           SLGNGEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYLD
Sbjct: 121 SLGNGEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYLD 167

[Close]

BLAST of Cmc11g0293621 vs. ExPASy TrEMBL
Match: A0A0A0LQF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G420470 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.5e-84
Identity = 158/167 (94.61%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MEKSVYSSAQQFPHPLPSFPSSAVESGWTAYLDNPSDDDTNTYPTSSLLSDAASHAVAAA 60
           MEKSVYSSAQQFPHPLPSFPSSA+ESGWTAYLD+PSDDDTNT+PTSSLLSDAASHAVAAA
Sbjct: 1   MEKSVYSSAQQFPHPLPSFPSSALESGWTAYLDSPSDDDTNTFPTSSLLSDAASHAVAAA 60

Query: 61  HPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS 120
            PPT LTNHL+ PTKLILKPKQPH FVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS
Sbjct: 61  LPPTPLTNHLRFPTKLILKPKQPHLFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYRRKS 120

Query: 121 SLGNGEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYLD 168
           SLGNGEKYRDHERRLEI FKRKASEYTDLKKRGLCLVPLSMLTNYLD
Sbjct: 121 SLGNGEKYRDHERRLEISFKRKASEYTDLKKRGLCLVPLSMLTNYLD 167

[Close]

BLAST of Cmc11g0293621 vs. ExPASy TrEMBL
Match: A0A6J1G847 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111451703 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 3.8e-48
Identity = 121/176 (68.75%), Postives = 130/176 (73.86%), Query Frame = 0


Query: 1   MEKSVYSSAQQFPHPLPSFPSSAV-----ESGWTAYLDNPSDDDTNTYPTSSLLSDAASH 60
           MEKSV SS QQFPHPLPSF +S+      ES WTAYLD+PS DD  +  +SSLLSDAASH
Sbjct: 1   MEKSVNSSIQQFPHPLPSFSTSSAATAVEESAWTAYLDDPS-DDAYSLASSSLLSDAASH 60

Query: 61  AV-AAAHPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGN 120
           A    + PP  L++HLKIP KL LKPK   FFVDTSLEDTASSPDNSPKV D  GPFDGN
Sbjct: 61  AAYKLSAPPPPLSDHLKIPKKLSLKPK-AQFFVDTSLEDTASSPDNSPKVAD-FGPFDGN 120

Query: 121 HYRRKSSLGN----GEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYL 167
           +YRRKSSLGN    GEKYRDHE         K  EYTDLKKRGLCLVPLSML NYL
Sbjct: 121 NYRRKSSLGNGRRMGEKYRDHE--------MKTHEYTDLKKRGLCLVPLSMLANYL 165

[Close]

BLAST of Cmc11g0293621 vs. TAIR 10
Match: AT3G21710.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 3.1e-10
Identity = 59/176 (33.52%), Postives = 84/176 (47.73%), Query Frame = 0


Query: 25  ESGWTAYLDNPSD------------DDTNTY----PTSSLLSDAASHAVAAAHPPTTLTN 84
           ESGWT YLD+ S+             D ++Y     ++SL+SDAA+HA +    P     
Sbjct: 37  ESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHAFSGKSFPVNFPA 96

Query: 85  HLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVG--DHL--GPFDGNHYRRKS-SLG 144
            LK       + +      D SLEDTASSP NSPKV   +H+   P     Y   S  +G
Sbjct: 97  KLKFG-----RGRTKKICEDDSLEDTASSPVNSPKVSHFEHIQTPPRKIEDYVSSSFVMG 156

Query: 145 NGEKYRDHERRLEIGFKRKA--------------SEYTDLKKRGLCLVPLSMLTNY 166
           N     DH+ +++ G ++K               +   DL+ RGLC+VP+SML N+
Sbjct: 157 NIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNNNNNNMDLRSRGLCVVPISMLANF 207

[Close]

BLAST of Cmc11g0293621 vs. TAIR 10
Match: AT5G54790.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50930.1); Has 53 Blast hits to 53 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 1.2e-06
Identity = 51/171 (29.82%), Postives = 75/171 (43.86%), Query Frame = 0


Query: 1   MEKSVYSSAQQFPHPLPSF--PSSAVESGWTAYLDNPSDDDTNTYPTSSLLSDAASHAVA 60
           ME S+ ++     H    F    +  ES WT Y ++  +  ++        S + S A +
Sbjct: 1   MESSMNNAFIMSKHETAMFTDDQNPEESSWTMYFEDFFEASSSIVDVGDFSSSSVSDAAS 60

Query: 61  AAHPPTTLTNHLKIPTKLILK---PKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNH 120
                 TL    +  + L +K    ++  F     LEDTASSP  SP V   +   D N 
Sbjct: 61  FVATKKTLNVSKQEGSNLDIKRTRNREIPFGRHHDLEDTASSPSGSPNVYSMMNLQDNNT 120

Query: 121 YRRKSSLGNGEKYRDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYL 167
                 +G      D E+R+      +     DLKK+GLCLVPLSM+TN+L
Sbjct: 121 RHGGGIVG------DDEKRVS-AVPNQGGLPIDLKKKGLCLVPLSMVTNFL 164

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BLAST of Cmc11g0293621 vs. TAIR 10
Match: AT3G21710.1 (unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 1.7e-05
Identity = 37/96 (38.54%), Postives = 48/96 (50.00%), Query Frame = 0


Query: 25  ESGWTAYLDNPSD------------DDTNTY----PTSSLLSDAASHAVAAAHPPTTLTN 84
           ESGWT YLD+ S+             D ++Y     ++SL+SDAA+HA +    P     
Sbjct: 37  ESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHAFSGKSFPVNFPA 96

Query: 85  HLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKV 105
            LK       + +      D SLEDTASSP NSPKV
Sbjct: 97  KLKFG-----RGRTKKICEDDSLEDTASSPVNSPKV 127

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BLAST of Cmc11g0293621 vs. TAIR 10
Match: AT3G20557.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 8.6e-05
Identity = 52/170 (30.59%), Postives = 73/170 (42.94%), Query Frame = 0


Query: 1   MEKSVYSSA---QQFPHPLPSFPSSAVESGWTAYLDNPSDDDTNTYPTSSLLSDAASHAV 60
           ME S  S+      F +   +      ES WT Y +  ++D    Y  SS++SDAAS   
Sbjct: 1   MENSALSNCVRRTNFSNQQRTMQEGLEESSWTMYFE--TEDGLGHYDDSSMMSDAAS--- 60

Query: 61  AAAHPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDGNHYR 120
                                    P   V+   EDTASSP N  +   + G  D     
Sbjct: 61  -------------------------PMGCVE---EDTASSPSN--RTEGYSGMEDNTIEE 120

Query: 121 RKSSLGNGEKYRDHERRLEIGFKRKASEY-TDLKKRGLCLVPLSMLTNYL 167
           +  + G  E+   ++  ++I       EY  +LKKRGLCLVPLSML+NY+
Sbjct: 121 KTMNNGKIEEKILNKNGIKI------EEYCAELKKRGLCLVPLSMLSNYI 129

The following BLAST results are available for this feature:

BLAST of Cmc11g0293621 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043428.1	5.3e-89	100.00	uncharacterized protein E6C27_scaffold1639G00370 [Cucumis melo var. makuwa]	[more]
XP_008455849.1	1.5e-88	99.40	PREDICTED: uncharacterized protein LOC103495948 [Cucumis melo] >TYK00183.1 uncha...	[more]
XP_011650013.1	2.0e-83	94.61	vascular-related unknown protein 1 [Cucumis sativus] >KGN63264.1 hypothetical pr...	[more]
XP_038902043.1	3.5e-64	80.57	vascular-related unknown protein 1-like [Benincasa hispida]	[more]
KAG7034965.1	1.2e-48	69.89	hypothetical protein SDJN02_01758, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Cmc11g0293621 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSZ3	4.3e-09	33.52	Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 ...	[more]
Q5BPG5	1.7e-05	29.82	Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 ...	[more]

BLAST of Cmc11g0293621 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TKT4	2.6e-89	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BK94	7.5e-89	99.40	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C201	7.5e-89	99.40	uncharacterized protein LOC103495948 OS=Cucumis melo OX=3656 GN=LOC103495948 PE=...	[more]
A0A0A0LQF7	9.5e-84	94.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G420470 PE=4 SV=1	[more]
A0A6J1G847	3.8e-48	68.75	Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111451703 PE=4 SV=1	[more]

BLAST of Cmc11g0293621 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21710.2	3.1e-10	33.52	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]
AT5G54790.1	1.2e-06	29.82	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G21710.1	1.7e-05	38.54	unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bac...	[more]
AT3G20557.1	8.6e-05	30.59	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..127
None	No IPR available	PANTHER	PTHR33974:SF2	VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED	coord: 1..166
IPR039280	VASCULAR-RELATED UNKNOWN PROTEIN	PANTHER	PTHR33974	VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED	coord: 1..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0293621.1	Cmc11g0293621.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010089	xylem development