Cmc11g0293461 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0293461
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase domain-containing protein
LocationCMiso1.1chr11: 9650292 .. 9651062 (-)
RNA-Seq ExpressionCmc11g0293461
SyntenyCmc11g0293461
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTGCTTACAGAGTATAAAGACATTTTTGCTTGGTCGTACAAGGAGATGCCAAGACTTGATCCAAAGGTAGCAGTCCATCATCTCGCAATTAAACCAAGGTATCAACCAATTATGCAAGCACAACGACGTCTTCGACTAGAGCTTATTCCCCAGATCAAGGTTGAAGTCAACAAGTTGATTGAAGCAGGATTCATTTTCGAAGTCAAATATCCTACATGGATAGCAAATATTGTCCCTGTCAGAAAAAAGAACGAGCAGCTTCTCGTTTGTGTAGACTTTCATGACCTGAATAATGCATGCCCTAAAGATGATTTTCCTTTACCCATCATAGAAATCATGGTTGATGCAACTATTGGACACGAGGCGCTGTCCTTTATGGATGGGTCGTCTAGATATAACCAAATAAGAATGGCTCTTTCAGATGAAGAAATGACAGCTTTCAGGACTCCAAAGGGAATATATTACTACAAGGTAATGCCCTTTGGATTGAAAAATGCTGGCGCCACTTATCAACGTGCTATGGAAAAAGTATTTGATGATATACTACATAAGTATGTCGAGTGCTATGTTGATGACCTTGTGATCAAATCCAAGAGACGACAAGACCATTTAAAGGATCTAAAAGTTATGTTCGACCGCATACAAAAAAGTCAGCTGAGGATGAACCCTCTCAAATGCGCGTTCGGTGTGACTTCAGGAAAGTTTCTTAGCATCATTGTAAGGCACCGAGTTGAGATAGACCAATCCAAGATTAATGTCATTTAG

mRNA sequence

ATGAGTTTGCTTACAGAGTATAAAGACATTTTTGCTTGGTCGTACAAGGAGATGCCAAGACTTGATCCAAAGGTAGCAGTCCATCATCTCGCAATTAAACCAAGGTATCAACCAATTATGCAAGCACAACGACGTCTTCGACTAGAGCTTATTCCCCAGATCAAGGTTGAAGTCAACAAGTTGATTGAAGCAGGATTCATTTTCGAAGTCAAATATCCTACATGGATAGCAAATATTGTCCCTGTCAGAAAAAAGAACGAGCAGCTTCTCGTTTGTGTAGACTTTCATGACCTGAATAATGCATGCCCTAAAGATGATTTTCCTTTACCCATCATAGAAATCATGGTTGATGCAACTATTGGACACGAGGCGCTGTCCTTTATGGATGGGTCGTCTAGATATAACCAAATAAGAATGGCTCTTTCAGATGAAGAAATGACAGCTTTCAGGACTCCAAAGGGAATATATTACTACAAGGTAATGCCCTTTGGATTGAAAAATGCTGGCGCCACTTATCAACGTGCTATGGAAAAAGTATTTGATGATATACTACATAAGTATGTCGAGTGCTATGTTGATGACCTTGTGATCAAATCCAAGAGACGACAAGACCATTTAAAGGATCTAAAAGTTATGTTCGACCGCATACAAAAAAGTCAGCTGAGGATGAACCCTCTCAAATGCGCGTTCGGTGTGACTTCAGGAAAGTTTCTTAGCATCATTGTAAGGCACCGAGTTGAGATAGACCAATCCAAGATTAATGTCATTTAG

Coding sequence (CDS)

ATGAGTTTGCTTACAGAGTATAAAGACATTTTTGCTTGGTCGTACAAGGAGATGCCAAGACTTGATCCAAAGGTAGCAGTCCATCATCTCGCAATTAAACCAAGGTATCAACCAATTATGCAAGCACAACGACGTCTTCGACTAGAGCTTATTCCCCAGATCAAGGTTGAAGTCAACAAGTTGATTGAAGCAGGATTCATTTTCGAAGTCAAATATCCTACATGGATAGCAAATATTGTCCCTGTCAGAAAAAAGAACGAGCAGCTTCTCGTTTGTGTAGACTTTCATGACCTGAATAATGCATGCCCTAAAGATGATTTTCCTTTACCCATCATAGAAATCATGGTTGATGCAACTATTGGACACGAGGCGCTGTCCTTTATGGATGGGTCGTCTAGATATAACCAAATAAGAATGGCTCTTTCAGATGAAGAAATGACAGCTTTCAGGACTCCAAAGGGAATATATTACTACAAGGTAATGCCCTTTGGATTGAAAAATGCTGGCGCCACTTATCAACGTGCTATGGAAAAAGTATTTGATGATATACTACATAAGTATGTCGAGTGCTATGTTGATGACCTTGTGATCAAATCCAAGAGACGACAAGACCATTTAAAGGATCTAAAAGTTATGTTCGACCGCATACAAAAAAGTCAGCTGAGGATGAACCCTCTCAAATGCGCGTTCGGTGTGACTTCAGGAAAGTTTCTTAGCATCATTGTAAGGCACCGAGTTGAGATAGACCAATCCAAGATTAATGTCATTTAG

Protein sequence

MSLLTEYKDIFAWSYKEMPRLDPKVAVHHLAIKPRYQPIMQAQRRLRLELIPQIKVEVNKLIEAGFIFEVKYPTWIANIVPVRKKNEQLLVCVDFHDLNNACPKDDFPLPIIEIMVDATIGHEALSFMDGSSRYNQIRMALSDEEMTAFRTPKGIYYYKVMPFGLKNAGATYQRAMEKVFDDILHKYVECYVDDLVIKSKRRQDHLKDLKVMFDRIQKSQLRMNPLKCAFGVTSGKFLSIIVRHRVEIDQSKINVI
Homology
BLAST of Cmc11g0293461 vs. NCBI nr
Match: XP_031742390.1 (uncharacterized protein LOC116401672 [Cucumis sativus])

HSP 1 Score: 458.4 bits (1178), Expect = 4.1e-125
Identity = 226/257 (87.94%), Postives = 239/257 (93.00%), Query Frame = 0

Query: 1    MSLLTEYKDIFAWSYKEMPRLDPKVAVHHLAIKPRYQPIMQAQRRLRLELIPQIKVEVNK 60
            MSLLTEY+DIFAWSYKEMP LDPKVAVHHLAIKP Y+PI QAQRR R ELIPQI+VEVNK
Sbjct: 991  MSLLTEYRDIFAWSYKEMPGLDPKVAVHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNK 1050

Query: 61   LIEAGFIFEVKYPTWIANIVPVRKKNEQLLVCVDFHDLNNACPKDDFPLPIIEIMVDATI 120
            LIEAGFI EVKYPTWIANIVPVRKKN QL VCVDF DLNNACPKDDFPLPI EIMVDAT 
Sbjct: 1051 LIEAGFIREVKYPTWIANIVPVRKKNGQLRVCVDFRDLNNACPKDDFPLPITEIMVDATT 1110

Query: 121  GHEALSFMDGSSRYNQIRMALSDEEMTAFRTPKGIYYYKVMPFGLKNAGATYQRAMEKVF 180
            GHEALSFMDGSS YNQIRMALSDEEMTAFRTPKGIY YKVMPFGLKNAGATYQRAM+KVF
Sbjct: 1111 GHEALSFMDGSSGYNQIRMALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVF 1170

Query: 181  DDILHKYVECYVDDLVIKSKRRQDHLKDLKVMFDRIQKSQLRMNPLKCAFGVTSGKFLSI 240
            DD+LH+YVECYVDDLV+K+KRRQDHLKDLKV+FDR++K QLRMNPLKCAFGVTSGKFL  
Sbjct: 1171 DDMLHRYVECYVDDLVVKTKRRQDHLKDLKVVFDRLRKYQLRMNPLKCAFGVTSGKFLGF 1230

Query: 241  IVRHR-VEIDQSKINVI 257
            IVRHR +EIDQSKI+ I
Sbjct: 1231 IVRHRGIEIDQSKIDAI 1247

BLAST of Cmc11g0293461 vs. NCBI nr
Match: XP_031737045.1 (uncharacterized protein LOC116402134 [Cucumis sativus])

HSP 1 Score: 458.4 bits (1178), Expect = 4.1e-125
Identity = 226/257 (87.94%), Postives = 239/257 (93.00%), Query Frame = 0

Query: 1    MSLLTEYKDIFAWSYKEMPRLDPKVAVHHLAIKPRYQPIMQAQRRLRLELIPQIKVEVNK 60
            MSLLTEY+DIFAWSYKEMP LDPKVAVHHLAIKP Y+PI QAQRR R ELIPQI+VEVNK
Sbjct: 744  MSLLTEYRDIFAWSYKEMPGLDPKVAVHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNK 803

Query: 61   LIEAGFIFEVKYPTWIANIVPVRKKNEQLLVCVDFHDLNNACPKDDFPLPIIEIMVDATI 120
            LIEAGFI EVKYPTWIANIVPVRKKN QL VCVDF DLNNACPKDDFPLPI EIMVDAT 
Sbjct: 804  LIEAGFIREVKYPTWIANIVPVRKKNGQLRVCVDFRDLNNACPKDDFPLPITEIMVDATT 863

Query: 121  GHEALSFMDGSSRYNQIRMALSDEEMTAFRTPKGIYYYKVMPFGLKNAGATYQRAMEKVF 180
            GHEALSFMDGSS YNQIRMALSDEEMTAFRTPKGIY YKVMPFGLKNAGATYQRAM+KVF
Sbjct: 864  GHEALSFMDGSSGYNQIRMALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVF 923

Query: 181  DDILHKYVECYVDDLVIKSKRRQDHLKDLKVMFDRIQKSQLRMNPLKCAFGVTSGKFLSI 240
            DD+LH+YVECYVDDLV+K+KRRQDHLKDLKV+FDR++K QLRMNPLKCAFGVTSGKFL  
Sbjct: 924  DDMLHRYVECYVDDLVVKTKRRQDHLKDLKVVFDRLRKYQLRMNPLKCAFGVTSGKFLGF 983

Query: 241  IVRHR-VEIDQSKINVI 257
            IVRHR +EIDQSKI+ I
Sbjct: 984  IVRHRGIEIDQSKIDAI 1000

BLAST of Cmc11g0293461 vs. NCBI nr
Match: XP_031739134.1 (uncharacterized protein LOC116402863 [Cucumis sativus])

HSP 1 Score: 458.4 bits (1178), Expect = 4.1e-125
Identity = 226/257 (87.94%), Postives = 239/257 (93.00%), Query Frame = 0

Query: 1    MSLLTEYKDIFAWSYKEMPRLDPKVAVHHLAIKPRYQPIMQAQRRLRLELIPQIKVEVNK 60
            MSLLTEY+DIFAWSYKEMP LDPKVAVHHLAIKP Y+PI QAQRR R ELIPQI+VEVNK
Sbjct: 1369 MSLLTEYRDIFAWSYKEMPGLDPKVAVHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNK 1428

Query: 61   LIEAGFIFEVKYPTWIANIVPVRKKNEQLLVCVDFHDLNNACPKDDFPLPIIEIMVDATI 120
            LIEAGFI EVKYPTWIANIVPVRKKN QL VCVDF DLNNACPKDDFPLPI EIMVDAT 
Sbjct: 1429 LIEAGFIREVKYPTWIANIVPVRKKNGQLRVCVDFRDLNNACPKDDFPLPITEIMVDATT 1488

Query: 121  GHEALSFMDGSSRYNQIRMALSDEEMTAFRTPKGIYYYKVMPFGLKNAGATYQRAMEKVF 180
            GHEALSFMDGSS YNQIRMALSDEEMTAFRTPKGIY YKVMPFGLKNAGATYQRAM+KVF
Sbjct: 1489 GHEALSFMDGSSGYNQIRMALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVF 1548

Query: 181  DDILHKYVECYVDDLVIKSKRRQDHLKDLKVMFDRIQKSQLRMNPLKCAFGVTSGKFLSI 240
            DD+LH+YVECYVDDLV+K+KRRQDHLKDLKV+FDR++K QLRMNPLKCAFGVTSGKFL  
Sbjct: 1549 DDMLHRYVECYVDDLVVKTKRRQDHLKDLKVVFDRLRKYQLRMNPLKCAFGVTSGKFLGF 1608

Query: 241  IVRHR-VEIDQSKINVI 257
            IVRHR +EIDQSKI+ I
Sbjct: 1609 IVRHRGIEIDQSKIDAI 1625

BLAST of Cmc11g0293461 vs. NCBI nr
Match: XP_031742032.1 (uncharacterized protein LOC116404025 [Cucumis sativus])

HSP 1 Score: 458.4 bits (1178), Expect = 4.1e-125
Identity = 226/257 (87.94%), Postives = 239/257 (93.00%), Query Frame = 0

Query: 1    MSLLTEYKDIFAWSYKEMPRLDPKVAVHHLAIKPRYQPIMQAQRRLRLELIPQIKVEVNK 60
            MSLLTEY+DIFAWSYKEMP LDPKVAVHHLAIKP Y+PI QAQRR R ELIPQI+VEVNK
Sbjct: 1369 MSLLTEYRDIFAWSYKEMPGLDPKVAVHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNK 1428

Query: 61   LIEAGFIFEVKYPTWIANIVPVRKKNEQLLVCVDFHDLNNACPKDDFPLPIIEIMVDATI 120
            LIEAGFI EVKYPTWIANIVPVRKKN QL VCVDF DLNNACPKDDFPLPI EIMVDAT 
Sbjct: 1429 LIEAGFIREVKYPTWIANIVPVRKKNGQLRVCVDFRDLNNACPKDDFPLPITEIMVDATT 1488

Query: 121  GHEALSFMDGSSRYNQIRMALSDEEMTAFRTPKGIYYYKVMPFGLKNAGATYQRAMEKVF 180
            GHEALSFMDGSS YNQIRMALSDEEMTAFRTPKGIY YKVMPFGLKNAGATYQRAM+KVF
Sbjct: 1489 GHEALSFMDGSSGYNQIRMALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVF 1548

Query: 181  DDILHKYVECYVDDLVIKSKRRQDHLKDLKVMFDRIQKSQLRMNPLKCAFGVTSGKFLSI 240
            DD+LH+YVECYVDDLV+K+KRRQDHLKDLKV+FDR++K QLRMNPLKCAFGVTSGKFL  
Sbjct: 1549 DDMLHRYVECYVDDLVVKTKRRQDHLKDLKVVFDRLRKYQLRMNPLKCAFGVTSGKFLGF 1608

Query: 241  IVRHR-VEIDQSKINVI 257
            IVRHR +EIDQSKI+ I
Sbjct: 1609 IVRHRGIEIDQSKIDAI 1625

BLAST of Cmc11g0293461 vs. NCBI nr
Match: XP_031737372.1 (uncharacterized protein LOC116402244 [Cucumis sativus])

HSP 1 Score: 458.4 bits (1178), Expect = 4.1e-125
Identity = 226/257 (87.94%), Postives = 239/257 (93.00%), Query Frame = 0

Query: 1    MSLLTEYKDIFAWSYKEMPRLDPKVAVHHLAIKPRYQPIMQAQRRLRLELIPQIKVEVNK 60
            MSLLTEY+DIFAWSYKEMP LDPKVAVHHLAIKP Y+PI QAQRR R ELIPQI+VEVNK
Sbjct: 744  MSLLTEYRDIFAWSYKEMPGLDPKVAVHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNK 803

Query: 61   LIEAGFIFEVKYPTWIANIVPVRKKNEQLLVCVDFHDLNNACPKDDFPLPIIEIMVDATI 120
            LIEAGFI EVKYPTWIANIVPVRKKN QL VCVDF DLNNACPKDDFPLPI EIMVDAT 
Sbjct: 804  LIEAGFIREVKYPTWIANIVPVRKKNGQLRVCVDFRDLNNACPKDDFPLPITEIMVDATT 863

Query: 121  GHEALSFMDGSSRYNQIRMALSDEEMTAFRTPKGIYYYKVMPFGLKNAGATYQRAMEKVF 180
            GHEALSFMDGSS YNQIRMALSDEEMTAFRTPKGIY YKVMPFGLKNAGATYQRAM+KVF
Sbjct: 864  GHEALSFMDGSSGYNQIRMALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVF 923

Query: 181  DDILHKYVECYVDDLVIKSKRRQDHLKDLKVMFDRIQKSQLRMNPLKCAFGVTSGKFLSI 240
            DD+LH+YVECYVDDLV+K+KRRQDHLKDLKV+FDR++K QLRMNPLKCAFGVTSGKFL  
Sbjct: 924  DDMLHRYVECYVDDLVVKTKRRQDHLKDLKVVFDRLRKYQLRMNPLKCAFGVTSGKFLGF 983

Query: 241  IVRHR-VEIDQSKINVI 257
            IVRHR +EIDQSKI+ I
Sbjct: 984  IVRHRGIEIDQSKIDAI 1000

BLAST of Cmc11g0293461 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 115.9 bits (289), Expect = 6.6e-25
Identity = 75/216 (34.72%), Postives = 111/216 (51.39%), Query Frame = 0

Query: 28  HHLAIK-----PRYQPIMQAQRRLRLELIPQIKVEVNKLIEAGFIFEVKYPTWIANIVPV 87
           H + IK     PR QP    ++  +     +I   V KL++  FI   K P   + +V V
Sbjct: 586 HDIEIKPGARLPRLQPYHVTEKNEQ-----EINKIVQKLLDNKFIVPSKSPC-SSPVVLV 645

Query: 88  RKKNEQLLVCVDFHDLNNACPKDDFPLPIIEIMVDATIGHEALSFMDGSSRYNQIRMALS 147
            KK+    +CVD+  LN A   D FPLP I+ ++      +  + +D  S Y+QI M   
Sbjct: 646 PKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPK 705

Query: 148 DEEMTAFRTPKGIYYYKVMPFGLKNAGATYQRAMEKVFDDILHKYVECYVDDLVIKSKRR 207
           D   TAF TP G Y Y VMPFGL NA +T+ R M   F D+  ++V  Y+DD++I S+  
Sbjct: 706 DRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESP 765

Query: 208 QDHLKDLKVMFDRIQKSQLRMNPLKCAFGVTSGKFL 239
           ++H K L  + +R++   L +   KC F     +FL
Sbjct: 766 EEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFL 793

BLAST of Cmc11g0293461 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 6.6e-25
Identity = 75/216 (34.72%), Postives = 111/216 (51.39%), Query Frame = 0

Query: 28  HHLAIK-----PRYQPIMQAQRRLRLELIPQIKVEVNKLIEAGFIFEVKYPTWIANIVPV 87
           H + IK     PR QP    ++  +     +I   V KL++  FI   K P   + +V V
Sbjct: 612 HDIEIKPGARLPRLQPYHVTEKNEQ-----EINKIVQKLLDNKFIVPSKSPC-SSPVVLV 671

Query: 88  RKKNEQLLVCVDFHDLNNACPKDDFPLPIIEIMVDATIGHEALSFMDGSSRYNQIRMALS 147
            KK+    +CVD+  LN A   D FPLP I+ ++      +  + +D  S Y+QI M   
Sbjct: 672 PKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPK 731

Query: 148 DEEMTAFRTPKGIYYYKVMPFGLKNAGATYQRAMEKVFDDILHKYVECYVDDLVIKSKRR 207
           D   TAF TP G Y Y VMPFGL NA +T+ R M   F D+  ++V  Y+DD++I S+  
Sbjct: 732 DRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESP 791

Query: 208 QDHLKDLKVMFDRIQKSQLRMNPLKCAFGVTSGKFL 239
           ++H K L  + +R++   L +   KC F     +FL
Sbjct: 792 EEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFL 819

BLAST of Cmc11g0293461 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.1e-23
Identity = 60/185 (32.43%), Postives = 100/185 (54.05%), Query Frame = 0

Query: 57  EVNKLIEAGFIFEVKYPTWIANIVPVR---KKNEQLLVCVDFHDLNNACPKDDFPLPIIE 116
           E+N+ +++G I E K      N  PV    KK   L + VD+  LN     + +PLP+IE
Sbjct: 431 EINQGLKSGIIRESK----AINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIE 490

Query: 117 IMVDATIGHEALSFMDGSSRYNQIRMALSDEEMTAFRTPKGIYYYKVMPFGLKNAGATYQ 176
            ++    G    + +D  S Y+ IR+   DE   AFR P+G++ Y VMP+G+  A A +Q
Sbjct: 491 QLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQ 550

Query: 177 RAMEKVFDDILHKYVECYVDDLVIKSKRRQDHLKDLKVMFDRIQKSQLRMNPLKCAFGVT 236
             +  +  +    +V CY+DD++I SK   +H+K +K +  +++ + L +N  KC F  +
Sbjct: 551 YFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQS 610

Query: 237 SGKFL 239
             KF+
Sbjct: 611 QVKFI 611

BLAST of Cmc11g0293461 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.1e-23
Identity = 60/185 (32.43%), Postives = 100/185 (54.05%), Query Frame = 0

Query: 57  EVNKLIEAGFIFEVKYPTWIANIVPVR---KKNEQLLVCVDFHDLNNACPKDDFPLPIIE 116
           E+N+ +++G I E K      N  PV    KK   L + VD+  LN     + +PLP+IE
Sbjct: 431 EINQGLKSGIIRESK----AINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIE 490

Query: 117 IMVDATIGHEALSFMDGSSRYNQIRMALSDEEMTAFRTPKGIYYYKVMPFGLKNAGATYQ 176
            ++    G    + +D  S Y+ IR+   DE   AFR P+G++ Y VMP+G+  A A +Q
Sbjct: 491 QLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQ 550

Query: 177 RAMEKVFDDILHKYVECYVDDLVIKSKRRQDHLKDLKVMFDRIQKSQLRMNPLKCAFGVT 236
             +  +  +    +V CY+DD++I SK   +H+K +K +  +++ + L +N  KC F  +
Sbjct: 551 YFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQS 610

Query: 237 SGKFL 239
             KF+
Sbjct: 611 QVKFI 611

BLAST of Cmc11g0293461 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.1e-23
Identity = 60/185 (32.43%), Postives = 100/185 (54.05%), Query Frame = 0

Query: 57  EVNKLIEAGFIFEVKYPTWIANIVPVR---KKNEQLLVCVDFHDLNNACPKDDFPLPIIE 116
           E+N+ +++G I E K      N  PV    KK   L + VD+  LN     + +PLP+IE
Sbjct: 431 EINQGLKSGIIRESK----AINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIE 490

Query: 117 IMVDATIGHEALSFMDGSSRYNQIRMALSDEEMTAFRTPKGIYYYKVMPFGLKNAGATYQ 176
            ++    G    + +D  S Y+ IR+   DE   AFR P+G++ Y VMP+G+  A A +Q
Sbjct: 491 QLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQ 550

Query: 177 RAMEKVFDDILHKYVECYVDDLVIKSKRRQDHLKDLKVMFDRIQKSQLRMNPLKCAFGVT 236
             +  +  +    +V CY+DD++I SK   +H+K +K +  +++ + L +N  KC F  +
Sbjct: 551 YFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQS 610

Query: 237 SGKFL 239
             KF+
Sbjct: 611 QVKFI 611

BLAST of Cmc11g0293461 vs. ExPASy TrEMBL
Match: A0A5A7TPR5 (RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1639G00040 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 3.4e-125
Identity = 225/226 (99.56%), Postives = 226/226 (100.00%), Query Frame = 0

Query: 16  KEMPRLDPKVAVHHLAIKPRYQPIMQAQRRLRLELIPQIKVEVNKLIEAGFIFEVKYPTW 75
           +EMPRLDPKVAVHHLAIKPRYQPIMQAQRRLRLELIPQIKVEVNKLIEAGFIFEVKYPTW
Sbjct: 365 EEMPRLDPKVAVHHLAIKPRYQPIMQAQRRLRLELIPQIKVEVNKLIEAGFIFEVKYPTW 424

Query: 76  IANIVPVRKKNEQLLVCVDFHDLNNACPKDDFPLPIIEIMVDATIGHEALSFMDGSSRYN 135
           IANIVPVRKKNEQLLVCVDFHDLNNACPKDDFPLPIIEIMVDATIGHEALSFMDGSSRYN
Sbjct: 425 IANIVPVRKKNEQLLVCVDFHDLNNACPKDDFPLPIIEIMVDATIGHEALSFMDGSSRYN 484

Query: 136 QIRMALSDEEMTAFRTPKGIYYYKVMPFGLKNAGATYQRAMEKVFDDILHKYVECYVDDL 195
           QIRMALSDEEMTAFRTPKGIYYYKVMPFGLKNAGATYQRAMEKVFDDILHKYVECYVDDL
Sbjct: 485 QIRMALSDEEMTAFRTPKGIYYYKVMPFGLKNAGATYQRAMEKVFDDILHKYVECYVDDL 544

Query: 196 VIKSKRRQDHLKDLKVMFDRIQKSQLRMNPLKCAFGVTSGKFLSII 242
           VIKSKRRQDHLKDLKVMFDRIQKSQLRMNPLKCAFGVTSGKFLSII
Sbjct: 545 VIKSKRRQDHLKDLKVMFDRIQKSQLRMNPLKCAFGVTSGKFLSII 590

BLAST of Cmc11g0293461 vs. ExPASy TrEMBL
Match: A0A5D3DYG9 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G001090 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 4.5e-125
Identity = 226/257 (87.94%), Postives = 238/257 (92.61%), Query Frame = 0

Query: 1   MSLLTEYKDIFAWSYKEMPRLDPKVAVHHLAIKPRYQPIMQAQRRLRLELIPQIKVEVNK 60
           MSLLTEYKDIFAWSYKEMP LDPKV VHHLAIKP Y+PI QAQRR R ELIPQI+VEVNK
Sbjct: 197 MSLLTEYKDIFAWSYKEMPGLDPKVEVHHLAIKPGYRPIKQAQRRFRPELIPQIEVEVNK 256

Query: 61  LIEAGFIFEVKYPTWIANIVPVRKKNEQLLVCVDFHDLNNACPKDDFPLPIIEIMVDATI 120
           LIEAGFI EVKYPTWIANIVPVRKKN QL VCVDF DLNNACPKDDFPLPI EIMVDAT 
Sbjct: 257 LIEAGFIREVKYPTWIANIVPVRKKNGQLRVCVDFRDLNNACPKDDFPLPITEIMVDATT 316

Query: 121 GHEALSFMDGSSRYNQIRMALSDEEMTAFRTPKGIYYYKVMPFGLKNAGATYQRAMEKVF 180
           GHEALSFMDGSS YNQIR+ALSDEEMTAFRTPKGIY YKVMPFGLKNAGATYQRAM+KVF
Sbjct: 317 GHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVF 376

Query: 181 DDILHKYVECYVDDLVIKSKRRQDHLKDLKVMFDRIQKSQLRMNPLKCAFGVTSGKFLSI 240
           DD+LHKYVECYVDDLV+KSKRRQDHLKDLKV+FDR++K QLRMNPLKCAFG+TSGKFL  
Sbjct: 377 DDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFDRLRKYQLRMNPLKCAFGLTSGKFLGF 436

Query: 241 IVRHR-VEIDQSKINVI 257
           IVRHR +EIDQSKI+ I
Sbjct: 437 IVRHRGIEIDQSKIDAI 453

BLAST of Cmc11g0293461 vs. ExPASy TrEMBL
Match: A0A5D3DXC7 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00760 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.4e-123
Identity = 224/257 (87.16%), Postives = 235/257 (91.44%), Query Frame = 0

Query: 1   MSLLTEYKDIFAWSYKEMPRLDPKVAVHHLAIKPRYQPIMQAQRRLRLELIPQIKVEVNK 60
           MSLLTEYKDIFAWSYKEMP LDPKVAVHHLAIKP Y+PI QAQR  R ELIPQI+VEVNK
Sbjct: 581 MSLLTEYKDIFAWSYKEMPGLDPKVAVHHLAIKPGYRPIKQAQRCFRPELIPQIEVEVNK 640

Query: 61  LIEAGFIFEVKYPTWIANIVPVRKKNEQLLVCVDFHDLNNACPKDDFPLPIIEIMVDATI 120
           LIEAGFI EVKYPTWIANIVPVRKKN QL VCVDF DLNNACPKDDFPLPI EIMVDAT 
Sbjct: 641 LIEAGFIREVKYPTWIANIVPVRKKNGQLRVCVDFRDLNNACPKDDFPLPITEIMVDATT 700

Query: 121 GHEALSFMDGSSRYNQIRMALSDEEMTAFRTPKGIYYYKVMPFGLKNAGATYQRAMEKVF 180
           GHEALSFMDGSS YNQIRM LSDEEMTAFRTPKGIY YKVMPFGLKN GATYQR M+KVF
Sbjct: 701 GHEALSFMDGSSGYNQIRMTLSDEEMTAFRTPKGIYCYKVMPFGLKNVGATYQRVMQKVF 760

Query: 181 DDILHKYVECYVDDLVIKSKRRQDHLKDLKVMFDRIQKSQLRMNPLKCAFGVTSGKFLSI 240
           DD+LHKYVECYVDDLV+KSKRRQDHLKDLKV+F+R++K QLRMNPLKCAFGVTSGKFL  
Sbjct: 761 DDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFNRLRKYQLRMNPLKCAFGVTSGKFLGF 820

Query: 241 IVRHR-VEIDQSKINVI 257
           IVRHR +EIDQSKI+ I
Sbjct: 821 IVRHRGIEIDQSKIDAI 837

BLAST of Cmc11g0293461 vs. ExPASy TrEMBL
Match: A0A5A7UMY2 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00830 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 5.4e-123
Identity = 224/257 (87.16%), Postives = 235/257 (91.44%), Query Frame = 0

Query: 1   MSLLTEYKDIFAWSYKEMPRLDPKVAVHHLAIKPRYQPIMQAQRRLRLELIPQIKVEVNK 60
           MSLLTEYKDIFAWSYKEMPRLDPKVAVH LAIKP Y+PI QAQRR R ELIPQI+VEVNK
Sbjct: 581 MSLLTEYKDIFAWSYKEMPRLDPKVAVHLLAIKPGYRPIKQAQRRFRPELIPQIEVEVNK 640

Query: 61  LIEAGFIFEVKYPTWIANIVPVRKKNEQLLVCVDFHDLNNACPKDDFPLPIIEIMVDATI 120
           LIEAGFI EVKYPTWIANIVPVRKKN QL VCVDF DLNNACPKDDFPLPI EIMVDAT 
Sbjct: 641 LIEAGFIREVKYPTWIANIVPVRKKNGQLRVCVDFRDLNNACPKDDFPLPITEIMVDATT 700

Query: 121 GHEALSFMDGSSRYNQIRMALSDEEMTAFRTPKGIYYYKVMPFGLKNAGATYQRAMEKVF 180
           GHEALSFMDGSS YNQIRMALSDEEMT FRTPKGIY YKVMPFGLKN GATYQR M+KVF
Sbjct: 701 GHEALSFMDGSSGYNQIRMALSDEEMTTFRTPKGIYCYKVMPFGLKNVGATYQRVMQKVF 760

Query: 181 DDILHKYVECYVDDLVIKSKRRQDHLKDLKVMFDRIQKSQLRMNPLKCAFGVTSGKFLSI 240
           DD+LHKYVECYVDDLV+KSKRRQDHLKDLKV+FDR++K QLRMNPLKCAFGVTS KFL  
Sbjct: 761 DDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFDRLRKYQLRMNPLKCAFGVTSRKFLGF 820

Query: 241 IVRHR-VEIDQSKINVI 257
           IVR+R +EIDQSKI+ I
Sbjct: 821 IVRYRGIEIDQSKIDAI 837

BLAST of Cmc11g0293461 vs. ExPASy TrEMBL
Match: A0A5A7SPV8 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9G00010 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.9e-121
Identity = 220/252 (87.30%), Postives = 231/252 (91.67%), Query Frame = 0

Query: 6   EYKDIFAWSYKEMPRLDPKVAVHHLAIKPRYQPIMQAQRRLRLELIPQIKVEVNKLIEAG 65
           EYKDIFAWSYKEMP LDPKVAVHHLAIKP Y+ I QAQRR R ELIPQI+VEVNKLIEAG
Sbjct: 273 EYKDIFAWSYKEMPGLDPKVAVHHLAIKPGYRLIKQAQRRFRPELIPQIQVEVNKLIEAG 332

Query: 66  FIFEVKYPTWIANIVPVRKKNEQLLVCVDFHDLNNACPKDDFPLPIIEIMVDATIGHEAL 125
           FI EVKYPTWIANIVPVRKKN QL VCVDF DLNNACPKDDFPLPI EIMVDAT GHE L
Sbjct: 333 FIREVKYPTWIANIVPVRKKNGQLRVCVDFRDLNNACPKDDFPLPITEIMVDATTGHETL 392

Query: 126 SFMDGSSRYNQIRMALSDEEMTAFRTPKGIYYYKVMPFGLKNAGATYQRAMEKVFDDILH 185
           SFMDGSS YNQIRMALSDEEMTAFRTPKGIY YKV+PFGLKNAGATYQRAM+KVFDD+LH
Sbjct: 393 SFMDGSSGYNQIRMALSDEEMTAFRTPKGIYCYKVIPFGLKNAGATYQRAMQKVFDDMLH 452

Query: 186 KYVECYVDDLVIKSKRRQDHLKDLKVMFDRIQKSQLRMNPLKCAFGVTSGKFLSIIVRHR 245
           KYVECYVDDLV+KSKRRQDHLKDLKV+FDR++K QLRMNPLKCAF VTSGKFL  IVRHR
Sbjct: 453 KYVECYVDDLVVKSKRRQDHLKDLKVVFDRLRKYQLRMNPLKCAFSVTSGKFLGFIVRHR 512

Query: 246 -VEIDQSKINVI 257
            +EIDQSKI+ I
Sbjct: 513 GIEIDQSKIDAI 524

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_031742390.14.1e-12587.94uncharacterized protein LOC116401672 [Cucumis sativus][more]
XP_031737045.14.1e-12587.94uncharacterized protein LOC116402134 [Cucumis sativus][more]
XP_031739134.14.1e-12587.94uncharacterized protein LOC116402863 [Cucumis sativus][more]
XP_031742032.14.1e-12587.94uncharacterized protein LOC116404025 [Cucumis sativus][more]
XP_031737372.14.1e-12587.94uncharacterized protein LOC116402244 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Q993156.6e-2534.72Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Q7LHG56.6e-2534.72Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
P0CT412.1e-2332.43Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
P0CT342.1e-2332.43Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT352.1e-2332.43Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
Match NameE-valueIdentityDescription
A0A5A7TPR53.4e-12599.56RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3DYG94.5e-12587.94Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A5D3DXC71.4e-12387.16Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A5A7UMY25.4e-12387.16Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A5A7SPV83.9e-12187.30Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9G00010 P... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 28..167
e-value: 2.3E-57
score: 195.7
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 4..256
NoneNo IPR availablePANTHERPTHR24559:SF341RNA-DIRECTED DNA POLYMERASE HOMOLOGcoord: 4..256
NoneNo IPR availableCDDcd01647RT_LTRcoord: 65..238
e-value: 5.59656E-72
score: 216.308
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 116..240
e-value: 6.6E-22
score: 78.1
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 107..242
e-value: 2.3E-57
score: 195.7
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 25..245

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0293461.1Cmc11g0293461.1mRNA