Cmc11g0293341 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0293341
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 9548573 .. 9549616 (+)
RNA-Seq Expression	Cmc11g0293341
Synteny	Cmc11g0293341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGTTAGCCCAGTTGACGGTACAGCCGACCTTGAGGCAGAAGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTACTATCTGAGGCGCACAGTTCCCCATTTTCCATGCATCCAGGTAGTACGAAGATGTATCAGGACTTAAAGCGGGTTTATTGGTGGCGTAACATGAAGAGAGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGATTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGGTTACACGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGATTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGATGAGGTAGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAGAAGAGTTATGCAGATGTGAGGCGGAAGACCTTGAGTTTGAGATAG

mRNA sequence

ATGCAGTTAGCCCAGTTGACGGTACAGCCGACCTTGAGGCAGAAGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTACTATCTGAGGCGCACAGTTCCCCATTTTCCATGCATCCAGGTAGTACGAAGATGTATCAGGACTTAAAGCGGGTTTATTGGTGGCGTAACATGAAGAGAGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGATTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGGTTACACGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGATTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGATGAGGTAGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAGAAGAGTTATGCAGATGTGAGGCGGAAGACCTTGAGTTTGAGATAG

Coding sequence (CDS)

ATGCAGTTAGCCCAGTTGACGGTACAGCCGACCTTGAGGCAGAAGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTACTATCTGAGGCGCACAGTTCCCCATTTTCCATGCATCCAGGTAGTACGAAGATGTATCAGGACTTAAAGCGGGTTTATTGGTGGCGTAACATGAAGAGAGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGATTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGGTTACACGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGATTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGATGAGGTAGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATTCAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGACAGAAGAGTTATGCAGATGTGAGGCGGAAGACCTTGAGTTTGAGATAG

Protein sequence

MQLAQLTVQPTLRQKIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKTLSLR

Homology

[Close]

BLAST of Cmc11g0293341 vs. NCBI nr
Match: KAA0051368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 696.0 bits (1795), Expect = 1.6e-196
Identity = 340/344 (98.84%), Postives = 342/344 (99.42%), Query Frame = 0


Query: 1    MQLAQLTVQPTLRQKIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSD 60
            MQLAQLTVQPTLRQ+IIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSD
Sbjct: 962  MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSD 1021

Query: 61   SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 120
            SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ
Sbjct: 1022 SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 1081

Query: 121  KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 180
            KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS
Sbjct: 1082 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 1141

Query: 181  KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 240
            KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER
Sbjct: 1142 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 1201

Query: 241  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDE 300
            LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCW E
Sbjct: 1202 LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGE 1261

Query: 301  VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKTL 345
            VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRK L
Sbjct: 1262 VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL 1305

[Close]

BLAST of Cmc11g0293341 vs. NCBI nr
Match: KAA0043669.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 693.7 bits (1789), Expect = 7.9e-196
Identity = 338/343 (98.54%), Postives = 341/343 (99.42%), Query Frame = 0


Query: 2   QLAQLTVQPTLRQKIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDS 61
           QLAQLTVQPTLRQ+IIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDS
Sbjct: 67  QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDS 126

Query: 62  AVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQK 121
           AVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQK
Sbjct: 127 AVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQK 186

Query: 122 PAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASK 181
           PAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASK
Sbjct: 187 PAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASK 246

Query: 182 WAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERL 241
           WAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERL
Sbjct: 247 WAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERL 306

Query: 242 NQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEV 301
           NQVLEDMLRACALEFP SWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCWDEV
Sbjct: 307 NQVLEDMLRACALEFPDSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWDEV 366

Query: 302 GEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKTL 345
           GEQRLMGPELVQSTNEA+QKIRSRMHTAQSRQKSYADVRRK L
Sbjct: 367 GEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKSYADVRRKDL 409

[Close]

BLAST of Cmc11g0293341 vs. NCBI nr
Match: KAA0060848.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 693.3 bits (1788), Expect = 1.0e-195
Identity = 340/344 (98.84%), Postives = 341/344 (99.13%), Query Frame = 0


Query: 1   MQLAQLTVQPTLRQKIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSD 60
           MQLAQLTVQPTLRQ+IIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL VPSD
Sbjct: 66  MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLYVPSD 125

Query: 61  SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 120
           SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ
Sbjct: 126 SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 185

Query: 121 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 180
           KPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS
Sbjct: 186 KPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 245

Query: 181 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 240
           KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER
Sbjct: 246 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 305

Query: 241 LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDE 300
           LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDE
Sbjct: 306 LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDE 365

Query: 301 VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKTL 345
           VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRK L
Sbjct: 366 VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL 409

[Close]

BLAST of Cmc11g0293341 vs. NCBI nr
Match: KAA0062835.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 692.6 bits (1786), Expect = 1.8e-195
Identity = 338/347 (97.41%), Postives = 342/347 (98.56%), Query Frame = 0


Query: 1   MQLAQLTVQPTLRQKIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSD 60
           MQLAQLTVQPTLRQ+IIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSD
Sbjct: 272 MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSD 331

Query: 61  SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 120
           SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQ
Sbjct: 332 SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQ 391

Query: 121 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 180
           KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA+
Sbjct: 392 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAN 451

Query: 181 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 240
           KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER
Sbjct: 452 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 511

Query: 241 LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDE 300
           LNQVLE+MLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCW E
Sbjct: 512 LNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE 571

Query: 301 VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKTLSLR 348
           VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRK L LR
Sbjct: 572 VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLELR 618

[Close]

BLAST of Cmc11g0293341 vs. NCBI nr
Match: KAA0035938.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 692.2 bits (1785), Expect = 2.3e-195
Identity = 337/344 (97.97%), Postives = 341/344 (99.13%), Query Frame = 0


Query: 1   MQLAQLTVQPTLRQKIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSD 60
           MQLAQLTVQPTLRQ+IIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE RLCVPSD
Sbjct: 322 MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFESRLCVPSD 381

Query: 61  SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 120
           SA+KTELL+EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ
Sbjct: 382 SAIKTELLTEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 441

Query: 121 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 180
           KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS
Sbjct: 442 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 501

Query: 181 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 240
           KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER
Sbjct: 502 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 561

Query: 241 LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDE 300
           LNQVLEDMLRACALEFPGSWD+HLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCW E
Sbjct: 562 LNQVLEDMLRACALEFPGSWDAHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE 621

Query: 301 VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKTL 345
           VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRK L
Sbjct: 622 VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL 665

[Close]

BLAST of Cmc11g0293341 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.8e-45
Identity = 100/339 (29.50%), Postives = 175/339 (51.62%), Query Frame = 0


Query: 5    QLTVQPTLRQKIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSA 64
            Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ 
Sbjct: 853  QISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQ 912

Query: 65   VKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKP 124
            +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP
Sbjct: 913  LTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKP 972

Query: 125  AGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKW 184
             G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + 
Sbjct: 973  YGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQT 1032

Query: 185  AQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN 244
            A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER N
Sbjct: 1033 ARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTN 1092

Query: 245  QVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWDEV 304
            Q +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+     
Sbjct: 1093 QTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSF 1152

Query: 305  GEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVR 341
             ++     E  Q T +  Q ++  ++T   + K Y D++
Sbjct: 1153 SDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMK 1185

[Close]

BLAST of Cmc11g0293341 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.8e-45
Identity = 100/339 (29.50%), Postives = 175/339 (51.62%), Query Frame = 0


Query: 5    QLTVQPTLRQKIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSA 64
            Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ 
Sbjct: 853  QISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQ 912

Query: 65   VKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKP 124
            +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP
Sbjct: 913  LTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKP 972

Query: 125  AGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKW 184
             G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + 
Sbjct: 973  YGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQT 1032

Query: 185  AQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN 244
            A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER N
Sbjct: 1033 ARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTN 1092

Query: 245  QVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWDEV 304
            Q +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+     
Sbjct: 1093 QTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSF 1152

Query: 305  GEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVR 341
             ++     E  Q T +  Q ++  ++T   + K Y D++
Sbjct: 1153 SDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMK 1185

[Close]

BLAST of Cmc11g0293341 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.8e-45
Identity = 100/339 (29.50%), Postives = 175/339 (51.62%), Query Frame = 0


Query: 5    QLTVQPTLRQKIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSA 64
            Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ 
Sbjct: 853  QISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQ 912

Query: 65   VKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKP 124
            +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP
Sbjct: 913  LTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKP 972

Query: 125  AGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKW 184
             G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + 
Sbjct: 973  YGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQT 1032

Query: 185  AQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN 244
            A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER N
Sbjct: 1033 ARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTN 1092

Query: 245  QVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWDEV 304
            Q +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+     
Sbjct: 1093 QTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSF 1152

Query: 305  GEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVR 341
             ++     E  Q T +  Q ++  ++T   + K Y D++
Sbjct: 1153 SDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMK 1185

[Close]

BLAST of Cmc11g0293341 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.8e-45
Identity = 100/339 (29.50%), Postives = 175/339 (51.62%), Query Frame = 0


Query: 5    QLTVQPTLRQKIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSA 64
            Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ 
Sbjct: 853  QISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQ 912

Query: 65   VKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKP 124
            +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP
Sbjct: 913  LTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKP 972

Query: 125  AGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKW 184
             G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + 
Sbjct: 973  YGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQT 1032

Query: 185  AQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN 244
            A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER N
Sbjct: 1033 ARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTN 1092

Query: 245  QVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWDEV 304
            Q +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+     
Sbjct: 1093 QTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSF 1152

Query: 305  GEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVR 341
             ++     E  Q T +  Q ++  ++T   + K Y D++
Sbjct: 1153 SDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMK 1185

[Close]

BLAST of Cmc11g0293341 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.8e-45
Identity = 100/339 (29.50%), Postives = 175/339 (51.62%), Query Frame = 0


Query: 5    QLTVQPTLRQKIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSA 64
            Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ 
Sbjct: 853  QISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQ 912

Query: 65   VKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKP 124
            +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP
Sbjct: 913  LTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKP 972

Query: 125  AGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKW 184
             G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + 
Sbjct: 973  YGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQT 1032

Query: 185  AQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN 244
            A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER N
Sbjct: 1033 ARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTN 1092

Query: 245  QVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWDEV 304
            Q +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+     
Sbjct: 1093 QTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSF 1152

Query: 305  GEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVR 341
             ++     E  Q T +  Q ++  ++T   + K Y D++
Sbjct: 1153 SDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMK 1185

[Close]

BLAST of Cmc11g0293341 vs. ExPASy TrEMBL
Match: A0A5A7U7V9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00950 PE=4 SV=1)

HSP 1 Score: 696.0 bits (1795), Expect = 7.7e-197
Identity = 340/344 (98.84%), Postives = 342/344 (99.42%), Query Frame = 0


Query: 1    MQLAQLTVQPTLRQKIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSD 60
            MQLAQLTVQPTLRQ+IIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSD
Sbjct: 962  MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSD 1021

Query: 61   SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 120
            SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ
Sbjct: 1022 SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 1081

Query: 121  KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 180
            KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS
Sbjct: 1082 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 1141

Query: 181  KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 240
            KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER
Sbjct: 1142 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 1201

Query: 241  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDE 300
            LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCW E
Sbjct: 1202 LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGE 1261

Query: 301  VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKTL 345
            VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRK L
Sbjct: 1262 VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL 1305

[Close]

BLAST of Cmc11g0293341 vs. ExPASy TrEMBL
Match: A0A5A7TR61 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19461G00010 PE=4 SV=1)

HSP 1 Score: 693.7 bits (1789), Expect = 3.8e-196
Identity = 338/343 (98.54%), Postives = 341/343 (99.42%), Query Frame = 0


Query: 2   QLAQLTVQPTLRQKIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDS 61
           QLAQLTVQPTLRQ+IIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDS
Sbjct: 67  QLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDS 126

Query: 62  AVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQK 121
           AVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQK
Sbjct: 127 AVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQK 186

Query: 122 PAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASK 181
           PAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASK
Sbjct: 187 PAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASK 246

Query: 182 WAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERL 241
           WAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERL
Sbjct: 247 WAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERL 306

Query: 242 NQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEV 301
           NQVLEDMLRACALEFP SWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCWDEV
Sbjct: 307 NQVLEDMLRACALEFPDSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWDEV 366

Query: 302 GEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKTL 345
           GEQRLMGPELVQSTNEA+QKIRSRMHTAQSRQKSYADVRRK L
Sbjct: 367 GEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKSYADVRRKDL 409

[Close]

BLAST of Cmc11g0293341 vs. ExPASy TrEMBL
Match: A0A5A7UZZ4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00810 PE=4 SV=1)

HSP 1 Score: 693.3 bits (1788), Expect = 5.0e-196
Identity = 340/344 (98.84%), Postives = 341/344 (99.13%), Query Frame = 0


Query: 1   MQLAQLTVQPTLRQKIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSD 60
           MQLAQLTVQPTLRQ+IIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL VPSD
Sbjct: 66  MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLYVPSD 125

Query: 61  SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 120
           SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ
Sbjct: 126 SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 185

Query: 121 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 180
           KPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS
Sbjct: 186 KPAGLLQPLSIPEWKWENVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 245

Query: 181 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 240
           KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER
Sbjct: 246 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 305

Query: 241 LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDE 300
           LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDE
Sbjct: 306 LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDE 365

Query: 301 VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKTL 345
           VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRK L
Sbjct: 366 VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL 409

[Close]

BLAST of Cmc11g0293341 vs. ExPASy TrEMBL
Match: A0A5A7VAA9 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold100G00010 PE=4 SV=1)

HSP 1 Score: 692.6 bits (1786), Expect = 8.5e-196
Identity = 338/347 (97.41%), Postives = 342/347 (98.56%), Query Frame = 0


Query: 1   MQLAQLTVQPTLRQKIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSD 60
           MQLAQLTVQPTLRQ+IIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSD
Sbjct: 272 MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSD 331

Query: 61  SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 120
           SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQ
Sbjct: 332 SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQ 391

Query: 121 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 180
           KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA+
Sbjct: 392 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAN 451

Query: 181 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 240
           KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER
Sbjct: 452 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 511

Query: 241 LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDE 300
           LNQVLE+MLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCW E
Sbjct: 512 LNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE 571

Query: 301 VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKTLSLR 348
           VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRK L LR
Sbjct: 572 VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLELR 618

[Close]

BLAST of Cmc11g0293341 vs. ExPASy TrEMBL
Match: A0A5A7SZD6 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G001250 PE=4 SV=1)

HSP 1 Score: 692.2 bits (1785), Expect = 1.1e-195
Identity = 337/344 (97.97%), Postives = 341/344 (99.13%), Query Frame = 0


Query: 1   MQLAQLTVQPTLRQKIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSD 60
           MQLAQLTVQPTLRQ+IIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFE RLCVPSD
Sbjct: 322 MQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFESRLCVPSD 381

Query: 61  SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 120
           SA+KTELL+EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ
Sbjct: 382 SAIKTELLTEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQ 441

Query: 121 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 180
           KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS
Sbjct: 442 KPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTAS 501

Query: 181 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 240
           KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER
Sbjct: 502 KWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTER 561

Query: 241 LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDE 300
           LNQVLEDMLRACALEFPGSWD+HLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCW E
Sbjct: 562 LNQVLEDMLRACALEFPGSWDAHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGE 621

Query: 301 VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKTL 345
           VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRK L
Sbjct: 622 VGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL 665

The following BLAST results are available for this feature:

BLAST of Cmc11g0293341 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051368.1	1.6e-196	98.84	pol protein [Cucumis melo var. makuwa]	[more]
KAA0043669.1	7.9e-196	98.54	pol protein [Cucumis melo var. makuwa]	[more]
KAA0060848.1	1.0e-195	98.84	pol protein [Cucumis melo var. makuwa]	[more]
KAA0062835.1	1.8e-195	97.41	pol protein [Cucumis melo var. makuwa]	[more]
KAA0035938.1	2.3e-195	97.97	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0293341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	7.8e-45	29.50	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	7.8e-45	29.50	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	7.8e-45	29.50	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	7.8e-45	29.50	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	7.8e-45	29.50	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc11g0293341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U7V9	7.7e-197	98.84	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]
A0A5A7TR61	3.8e-196	98.54	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19461G00010 ...	[more]
A0A5A7UZZ4	5.0e-196	98.84	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00810 PE...	[more]
A0A5A7VAA9	8.5e-196	97.41	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold100G00010 PE...	[more]
A0A5A7SZD6	1.1e-195	97.97	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G001250 PE...	[more]

BLAST of Cmc11g0293341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 61..117 e-value: 1.2E-17 score: 63.7
None	No IPR available	GENE3D	1.10.340.70		coord: 26..116 e-value: 1.1E-18 score: 69.3
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 53..286
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 125..333 e-value: 2.2E-47 score: 162.9
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 128..291 score: 18.918982
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 129..288

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0293341.1	Cmc11g0293341.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding