Cmc11g0292541 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0292541
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like
Location	CMiso1.1chr11: 8270181 .. 8275050 (-)
RNA-Seq Expression	Cmc11g0292541
Synteny	Cmc11g0292541

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGATGGTTTAAAACCGACTTTCGCTAAGAACCAAAATCTTTGGAGGGAAAGATATGTACGTGAAAAACCTAATCCATAAACCCCGAAAGAATTACATTCCGTTTGCAGCCTAAAAATTCCTCGACGGAACCTGCGGCGGCGATGGGCTGCGTATCCATCGTCATCGTTAGGTTATGAGATCTCTTTCCAATTCTCATCTTTATCTCAAAACTATATTCTCTCTCCGTAATTCTTTCATGGCTTCCTCTTTCACACAAACACTTAAACCAGATTTACCTCCTCAAGACCTAGACGACCTTCTCTGCTCCCATCCACAGAAACAGCGACAAGACGAATCCTCGTCTCTTACCGGTTCCAATTCCAATGACTCAAAACTTCTCTTGGGGTCGCCGACTGGATATTTGAGTGGCGAGTCGCGCATTGAACGAGCCTGGGCTCACTGGACGAAGCTCGGTCGGCCGAAGCTGATTGTAGCTCCCATGGTTGATAATTCGGAGCTGCCATTTCGTTTACTCTGCAGGAAATATGGTGCTGACGCGGCGTATACACCTATGCTCCATTCACGAATCTTTACCGAGAACGAGAAGTATCGGAACATGGAATTCACCACTTGTCAGGTATGTGACATTTTGAAGTCATTTTGTTGTGTTAACAACTTAAATTTTCTGTTTCATTTGGTATTGATGTATGTTTCCGGCTGCTATTTGTGGATCGGTAACTAATTGTAGGTTATAGTCTTGTCTGTACTATTCTTTAAGTTTATTTTTCATTGTTTTTAATTTTTGAATGATTTGTAGGAGGATCGTCCATTATTTGTTCAATTTTGTGCCAATGATCCCGATGTTCTGTTGGAGGCTGCTAGAAGAGTGGAACCATATTGTGATTACGTCGATCTAAACCTTGGGTAATCTTTGTTGCTCTAATTTGTACTCGGTTGATTAATTCGTATGGATGTTTGCGTTCTTTATGGTCGTATGTTCCAAATGCTGACTTCTTATGCTTCTCGTTGGTGGTGGAGTAAGGCTTTGTTCTCCAAAAGACTTTATGTTTGTTAAGATTGTGGATTATTCACCAAGTACATTTTGTGAATAAGAAGTAAGAAAACAAAACTACAAAAGAAGGGAGCCCTCAAAGGAGGATTTACAAGACTTCTCCAATTAGAGAGGAGGGAAGGAAAGCTATAGTAATGAAAAAGAGGGGAGCATTTACGCCAAGTCACACAAACTAACTATTGTCCCAAAAATATCCTTAAAATTCTTCTATTACGCTACTGCCAAGTGATCCAGTAAAGAGGACTCACAAAATGTTCCCACACAAAGCTTCTTTTCCTTTCTGAAGGGATGACCCCTTGAACTTTAACTGTTTAAGCAATGAAGATCTTTGGATCCTCTGGTAGAGCCATATGCTAAAAAAACACGTTCGTAATAGCCAGGAGAATCAAATACTTCATTCCCTAAGGATGATACTATGTCTTGGACCATTTTAAACTATATTATAACTTGACATGTGTGCATGTAAATGTGTTCGAGGGAACTTGACACTGAGGAGTTACCTTCCATTGTGAAAATCCTTGAGGATGTCACTTTATCCCAGACAAAGGTATTTGGAAAATGGAGAAAAAGGAGTCTTTTCAATCAGCTCCTTCTTAAAGATCTCCATTCTAATCTAAAATCTTCTCACTAGAGCAAGACGATAAATTTTACATCAAGCAATAATGATAAAGTGTTGAAACCATTAAGAAAATATATTGCTAAAAGACAATCAATGAATAATCAATTCGTAATAGAAAAATAGTTAAGTCAACATCAATCCAAAAGCTCAATTGATCCCTAGAACTAAAATGTTTAGTTACTTATGATCTCACAATATGTAAGAAGCATTGAGTTCACAAAATCCAGAATTCTAAAAGATCAAGGGAAAAATTAAGAATGTTGGCTAGTGATTCGATCCTGTCGCCATAATAAAACCACATTTTGTGCTCTCAGTCCTTGCACTTAAGCTCCCAAGAACCTTCCATCATGATCGCACACCTCCATCTCTTTGGAAATCAAAGTTATCCACTCTCTCAGCCTCCAAAAATCCCAGTTGAATGATCTACTTAAATCCTAAATGAAGTGGGAGTTATATAGCTGATTTGATGATAGCATTGTGATGCTACACAGCATTGCCCCTATCACCTTGCCAGCTGGTGGGGTCATGGCCTGATTGAACTTAATAGCACTGTGTCAAGCCTAGCATCGCACAGTGCTGCAATGCTTGTTGGAGGCTTTTTTCTTTATGTTTTCCTCTCTAAGGTTGAAATCGAGCCTAGCATTGCACTCCCTAAGGCTTTTTTTTCTTCATATTTTCACCTGAATTAATCCATTCCAGTTCAATTTGTCAGTTCCTACAAATTCAACAAATAAAAGTATCACAAACACTATTAATAACAAAAGTAACCAAATTATAAGCCTCAGAAAGCATTTTTTTAGTGCTTTTCAGTTCCGTCAAACATTGTCCATATATACATGTCAATAGTGGCATGTGGGTCTATCCTTGTGATAGAACTCTACCTTTGGTATAGAATTTTACACTTTATTCAAGTATGAATATGATCTCTTATACAGTGATGAATTGATAAACTCTCAATTCATGAAACATTCTCCTTGTTCTTCTTCTCTCGAAGAGTAACAAGCTAAACTTCTCTCGAAAGATACTAACTACTTGTTCCGCCTAAACCAACCACTATTTATAATCCCCACTAACCGACTTTAAAACTTTCTATTTACACATGTGTTGCACATGGGATTTCTCCTTTTTCCTCCTAATGTAATGAAATCTAATAGGGGGTCTAACACCTTGCTCAGAGAGAGATCAAATTTAAGAGGAAATCTTCTATGAAGAGGTTCATCCCCAGCCCAAACATCCTAAAAGATAAATCCAAAGCATCCCCAACAATATAGTTCATTCTGTCACGGATCTGACTGGTTTCAAATTCAGGCTATTTTGGGTGTAAGAACACCCTTTTAGCAATTATAGTCTCTCCTTTTATTTCAAATTGGAGGTGTTTTCTAACACACCTATAAGTGTGAAGTCTTTTAACTTCATTTATTTCAAGTGTTTCTCTTCTAAAAAAACACATTGAAGACCCTTAAATGATTAGAGTGGCTTTTACATATAACTTCTAACTGTTCTCCTTTTGAGTTGCGTCTAAACACGAGGTAAACGGAAAGAAAGAAAAATATTTTTGTCAGTTTGGGTTGATAACGGTTCAGGTTTTCAAAGAAGAAAAACTGAAAATATTCGGCCGGTGCTGAGTTTGGTCAAATCTATACCCGAATCCAATCAAATATTGAATAGTTTGCAAAGTAACGGAAGTGGTGCACCCTGTTAAAAGTTTGCTTTCATATCCTAGAGGGCTTGAGTTTGATCCTCCGACCTTGAGATTGGATCTTTTTAAAGATATTGCCTGTTTTCCTTCTGTTCAGCCAATTTATTTCAGCCCACATTCCATTTGCAGCTCACAGGCTCTAAGCCCAACCCATGCGCCATGTGCCATTAACCAAATGGTGTACTGCTTCAAAACACTAAACCAACAGTTTGTAGGTTTGGTTTTTATGTGTGACAATTCAGTTGGATTTTTAAAGTTCTTCCTAGATTTAGCAATTTACTTTTTGATACTCCAAACTAACAAAAACAATCTAGGATAATCTAAGTTCCAAATGTGTTGCATACCAAATATGCTGATTGTGTTCATATTTTTCACTCAAGGTTCCTGAACATCTATTGAGTAGTCGAGTAATTTCGTGCAGGTGTCCTCAGCGTATCGCAAGGCGAGGAAATTATGGAGCTTTTTTAATGGATAACTTACCTCTTGTAAAAGCAATAGTAGAGAAACTGGCTTCCAATCTTCAAGTTCCTGTATCATGCAAAATCCGAATCTTCCCAAATCTACAGGATACAATTAATTATGCAAGAATGTTAGAGGATGCTGGATGCTCTCTTTTAGCTGTTCATGGCCGCACAAGAGATGAAAAAGATGGTAAAAAATTCCGAGCTAACTGGAGTGCCATTAGTGCAGTTAAAAACGCTGTACGAATTCCAGTTCTTGCCAATGGGAATATAAGGCACATGGAAGATGTTAACAACTGTTTACAAGAGACGGGAGTCGAGGGTGTGCTCTCAGCAGAAACCCTTCTGGAGAATCCTGCACTTTTTGCTGGGTTTCGAACTGCTGAATGGATAGAGGGTCAGGAAGAAAATACCCGGGATGGTAACCTGGATCAAGCGGATCTGCTTGTAGACTACTTGAAGCTTTGTGAAAAATACCCTGTCCCATGGAGAATGATCCGTTCGCACGTACACAAGTTATTGGGAGATTGGTTCAAGATTCATCCACACATTAGAGAAGACTTCAATGCACAATCTAAGCTCACCTTTGAATTTCTTTACAATATGGTGGAGCGGCTGAGAGAATTGCAGGTAAAAATGCCTCTTTATATCAAAGATTCTCATGTACCTGCAATTTCATCCAATGCTTGATTGCTTCCACACATTATTCATCGATAGCCTTTTTGGTCTTAACTTAAAGATTCTTCGAGGAAATTAGATTGATACTGTTGTTGTACCACTAATATTCACATTAAATTGTCTTTCTTCAATCAGCTTAGGCACACAGTGAAGAAAGAAAAGATTTTGTATTTATTCTTGCGAATTGTAGCCTTATTTGATTTCAATAGGGACGAGAGATGAGACAAACATTACCTTTTGCCTTTGCCCACATTACCTATTCTACCATCTTGTTTAACATTCTTCTAGAAACGTTTTTCATTGAGTTCAAATGTTTTTAGTGATTTTTGTTAAACTCTTGAAAATGTAATTCTTCAACGT

mRNA sequence

TTGATGGTTTAAAACCGACTTTCGCTAAGAACCAAAATCTTTGGAGGGAAAGATATGTACGTGAAAAACCTAATCCATAAACCCCGAAAGAATTACATTCCGTTTGCAGCCTAAAAATTCCTCGACGGAACCTGCGGCGGCGATGGGCTGCGTATCCATCGTCATCGTTAGGTTATGAGATCTCTTTCCAATTCTCATCTTTATCTCAAAACTATATTCTCTCTCCGTAATTCTTTCATGGCTTCCTCTTTCACACAAACACTTAAACCAGATTTACCTCCTCAAGACCTAGACGACCTTCTCTGCTCCCATCCACAGAAACAGCGACAAGACGAATCCTCGTCTCTTACCGGTTCCAATTCCAATGACTCAAAACTTCTCTTGGGGTCGCCGACTGGATATTTGAGTGGCGAGTCGCGCATTGAACGAGCCTGGGCTCACTGGACGAAGCTCGGTCGGCCGAAGCTGATTGTAGCTCCCATGGTTGATAATTCGGAGCTGCCATTTCGTTTACTCTGCAGGAAATATGGTGCTGACGCGGCGTATACACCTATGCTCCATTCACGAATCTTTACCGAGAACGAGAAGTATCGGAACATGGAATTCACCACTTGTCAGGAGGATCGTCCATTATTTGTTCAATTTTGTGCCAATGATCCCGATGTTCTGTTGGAGGCTGCTAGAAGAGTGGAACCATATTGTGATTACGTCGATCTAAACCTTGGGTGTCCTCAGCGTATCGCAAGGCGAGGAAATTATGGAGCTTTTTTAATGGATAACTTACCTCTTGTAAAAGCAATAGTAGAGAAACTGGCTTCCAATCTTCAAGTTCCTGTATCATGCAAAATCCGAATCTTCCCAAATCTACAGGATACAATTAATTATGCAAGAATGTTAGAGGATGCTGGATGCTCTCTTTTAGCTGTTCATGGCCGCACAAGAGATGAAAAAGATGGTAAAAAATTCCGAGCTAACTGGAGTGCCATTAGTGCAGTTAAAAACGCTGTACGAATTCCAGTTCTTGCCAATGGGAATATAAGGCACATGGAAGATGTTAACAACTGTTTACAAGAGACGGGAGTCGAGGGTGTGCTCTCAGCAGAAACCCTTCTGGAGAATCCTGCACTTTTTGCTGGGTTTCGAACTGCTGAATGGATAGAGGGTCAGGAAGAAAATACCCGGGATGGTAACCTGGATCAAGCGGATCTGCTTGTAGACTACTTGAAGCTTTGTGAAAAATACCCTGTCCCATGGAGAATGATCCGTTCGCACGTACACAAGTTATTGGGAGATTGGTTCAAGATTCATCCACACATTAGAGAAGACTTCAATGCACAATCTAAGCTCACCTTTGAATTTCTTTACAATATGGTGGAGCGGCTGAGAGAATTGCAGGTAAAAATGCCTCTTTATATCAAAGATTCTCATGTACCTGCAATTTCATCCAATGCTTGATTGCTTCCACACATTATTCATCGATAGCCTTTTTGGTCTTAACTTAAAGATTCTTCGAGGAAATTAGATTGATACTGTTGTTGTACCACTAATATTCACATTAAATTGTCTTTCTTCAATCAGCTTAGGCACACAGTGAAGAAAGAAAAGATTTTGTATTTATTCTTGCGAATTGTAGCCTTATTTGATTTCAATAGGGACGAGAGATGAGACAAACATTACCTTTTGCCTTTGCCCACATTACCTATTCTACCATCTTGTTTAACATTCTTCTAGAAACGTTTTTCATTGAGTTCAAATGTTTTTAGTGATTTTTGTTAAACTCTTGAAAATGTAATTCTTCAACGT

Coding sequence (CDS)

ATGAGATCTCTTTCCAATTCTCATCTTTATCTCAAAACTATATTCTCTCTCCGTAATTCTTTCATGGCTTCCTCTTTCACACAAACACTTAAACCAGATTTACCTCCTCAAGACCTAGACGACCTTCTCTGCTCCCATCCACAGAAACAGCGACAAGACGAATCCTCGTCTCTTACCGGTTCCAATTCCAATGACTCAAAACTTCTCTTGGGGTCGCCGACTGGATATTTGAGTGGCGAGTCGCGCATTGAACGAGCCTGGGCTCACTGGACGAAGCTCGGTCGGCCGAAGCTGATTGTAGCTCCCATGGTTGATAATTCGGAGCTGCCATTTCGTTTACTCTGCAGGAAATATGGTGCTGACGCGGCGTATACACCTATGCTCCATTCACGAATCTTTACCGAGAACGAGAAGTATCGGAACATGGAATTCACCACTTGTCAGGAGGATCGTCCATTATTTGTTCAATTTTGTGCCAATGATCCCGATGTTCTGTTGGAGGCTGCTAGAAGAGTGGAACCATATTGTGATTACGTCGATCTAAACCTTGGGTGTCCTCAGCGTATCGCAAGGCGAGGAAATTATGGAGCTTTTTTAATGGATAACTTACCTCTTGTAAAAGCAATAGTAGAGAAACTGGCTTCCAATCTTCAAGTTCCTGTATCATGCAAAATCCGAATCTTCCCAAATCTACAGGATACAATTAATTATGCAAGAATGTTAGAGGATGCTGGATGCTCTCTTTTAGCTGTTCATGGCCGCACAAGAGATGAAAAAGATGGTAAAAAATTCCGAGCTAACTGGAGTGCCATTAGTGCAGTTAAAAACGCTGTACGAATTCCAGTTCTTGCCAATGGGAATATAAGGCACATGGAAGATGTTAACAACTGTTTACAAGAGACGGGAGTCGAGGGTGTGCTCTCAGCAGAAACCCTTCTGGAGAATCCTGCACTTTTTGCTGGGTTTCGAACTGCTGAATGGATAGAGGGTCAGGAAGAAAATACCCGGGATGGTAACCTGGATCAAGCGGATCTGCTTGTAGACTACTTGAAGCTTTGTGAAAAATACCCTGTCCCATGGAGAATGATCCGTTCGCACGTACACAAGTTATTGGGAGATTGGTTCAAGATTCATCCACACATTAGAGAAGACTTCAATGCACAATCTAAGCTCACCTTTGAATTTCTTTACAATATGGTGGAGCGGCTGAGAGAATTGCAGGTAAAAATGCCTCTTTATATCAAAGATTCTCATGTACCTGCAATTTCATCCAATGCTTGA

Protein sequence

MRSLSNSHLYLKTIFSLRNSFMASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTGSNSNDSKLLLGSPTGYLSGESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGADAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQETGVEGVLSAETLLENPALFAGFRTAEWIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPWRMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSHVPAISSNA

Homology

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BLAST of Cmc11g0292541 vs. NCBI nr
Match: XP_008462837.1 (PREDICTED: tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Cucumis melo])

HSP 1 Score: 874.4 bits (2258), Expect = 4.0e-250
Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 0


Query: 1   MRSLSNSHLYLKTIFSLRNSFMASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTG 60
           MRSLSNSHLYLKTIFSLRNSFMASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTG
Sbjct: 1   MRSLSNSHLYLKTIFSLRNSFMASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTG 60

Query: 61  SNSNDSKLLLGSPTGYLSGESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGA 120
           SNSNDSKLLLGSPTGYLSGESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGA
Sbjct: 61  SNSNDSKLLLGSPTGYLSGESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGA 120

Query: 121 DAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD 180
           DAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD
Sbjct: 121 DAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD 180

Query: 181 LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM 240
           LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM
Sbjct: 181 LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM 240

Query: 241 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQE 300
           LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQE
Sbjct: 241 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQE 300

Query: 301 TGVEGVLSAETLLENPALFAGFRTAEWIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPW 360
           TGVEGVLSAETLLENPALFAGFRTAEWIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPW
Sbjct: 301 TGVEGVLSAETLLENPALFAGFRTAEWIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPW 360

Query: 361 RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSHVP 420
           RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSHVP
Sbjct: 361 RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSHVP 420

Query: 421 AISSNA 427
           AISSNA
Sbjct: 421 AISSNA 426

[Close]

BLAST of Cmc11g0292541 vs. NCBI nr
Match: XP_011650036.1 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Cucumis sativus])

HSP 1 Score: 819.3 bits (2115), Expect = 1.5e-233
Identity = 404/426 (94.84%), Postives = 407/426 (95.54%), Query Frame = 0


Query: 1   MRSLSNSHLYLKTIFSLRNSFMASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTG 60
           MRSLSNSHL+LK IFSL NS MASS  QTLKPDL PQDLDDLLCS   KQ Q ESSSLT 
Sbjct: 1   MRSLSNSHLHLKYIFSLPNSLMASSLIQTLKPDLAPQDLDDLLCSPSHKQPQHESSSLTN 60

Query: 61  SNSNDSKLLLGSPTGYLSGESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGA 120
           S SNDS  LLGSPTGYLS ESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGA
Sbjct: 61  STSNDSTPLLGSPTGYLSRESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGA 120

Query: 121 DAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD 180
           +AAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD
Sbjct: 121 EAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD 180

Query: 181 LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM 240
           LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM
Sbjct: 181 LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM 240

Query: 241 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQE 300
           LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVN+CLQE
Sbjct: 241 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNDCLQE 300

Query: 301 TGVEGVLSAETLLENPALFAGFRTAEWIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPW 360
           TGVEGVLSAETLLENPALFAGFRTAEWIEG EENTRDGNLDQADLLVDYLKLCEKYPVPW
Sbjct: 301 TGVEGVLSAETLLENPALFAGFRTAEWIEGHEENTRDGNLDQADLLVDYLKLCEKYPVPW 360

Query: 361 RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSHVP 420
           RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSH  
Sbjct: 361 RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSHAL 420

Query: 421 AISSNA 427
           AISSNA
Sbjct: 421 AISSNA 426

[Close]

BLAST of Cmc11g0292541 vs. NCBI nr
Match: KAA0066396.1 (tRNA-dihydrouridine(16/17) synthase [Cucumis melo var. makuwa] >TYK00889.1 tRNA-dihydrouridine(16/17) synthase [Cucumis melo var. makuwa])

HSP 1 Score: 800.8 bits (2067), Expect = 5.6e-228
Identity = 405/486 (83.33%), Postives = 405/486 (83.33%), Query Frame = 0


Query: 22  MASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTGSNSNDSKLLLGSPTGYLSGES 81
           MASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTGSNSNDSKLLLGSPTGYLSGES
Sbjct: 1   MASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTGSNSNDSKLLLGSPTGYLSGES 60

Query: 82  RIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGADAAYTPMLHSRIFTENEKYRN 141
           RIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGADAAYTPMLHSRIFTENEKYRN
Sbjct: 61  RIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGADAAYTPMLHSRIFTENEKYRN 120

Query: 142 MEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLG----------------- 201
           MEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLG                 
Sbjct: 121 MEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGELDTEELPSIVKILEDV 180

Query: 202 ------------------------------------------------------------ 261
                                                                       
Sbjct: 181 TLSQTKHCPYHLASWWGHGLIELNSTVSSLASHSAAMLVGGFFLYVFLSKVPEHLLSSRV 240

Query: 262 ----CPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM 321
               CPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM
Sbjct: 241 ISCRCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM 300

Query: 322 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQE 381
           LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQE
Sbjct: 301 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQE 360

Query: 382 TGVEGVLSAETLLENPALFAGFRTAEWIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPW 427
           TGVEGVLSAETLLENPALFAGFRTAEWIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPW
Sbjct: 361 TGVEGVLSAETLLENPALFAGFRTAEWIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPW 420

[Close]

BLAST of Cmc11g0292541 vs. NCBI nr
Match: XP_038901742.1 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Benincasa hispida])

HSP 1 Score: 796.2 bits (2055), Expect = 1.4e-226
Identity = 392/426 (92.02%), Postives = 401/426 (94.13%), Query Frame = 0


Query: 1   MRSLSNSHLYLKTIFSLRNSFMASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTG 60
           MRS  NSHL+ KTIFS R+S MASSFTQTLKPDL PQDLDD LCS PQ Q+Q E SS T 
Sbjct: 1   MRSPYNSHLHFKTIFSFRSSLMASSFTQTLKPDL-PQDLDDRLCSDPQNQQQQECSSFT- 60

Query: 61  SNSNDSKLLLGSPTGYLSGESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGA 120
             SNDS LLL SP+GYL GESRIERAWAHW KLGRPKLIVAPMVDNSELPFRLLCRKYGA
Sbjct: 61  -KSNDSTLLLASPSGYLCGESRIERAWAHWRKLGRPKLIVAPMVDNSELPFRLLCRKYGA 120

Query: 121 DAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD 180
           +AAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD
Sbjct: 121 EAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD 180

Query: 181 LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM 240
           LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIF NLQDTINYARM
Sbjct: 181 LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFSNLQDTINYARM 240

Query: 241 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQE 300
           LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVR+PVLANGNIRHMEDV NCLQE
Sbjct: 241 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRVPVLANGNIRHMEDVYNCLQE 300

Query: 301 TGVEGVLSAETLLENPALFAGFRTAEWIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPW 360
           TGVEGVLSAETLLENPALFAGFRTAEWI+G EENTRDGNLDQADLLVDYLK CEKYPVPW
Sbjct: 301 TGVEGVLSAETLLENPALFAGFRTAEWIKGHEENTRDGNLDQADLLVDYLKFCEKYPVPW 360

Query: 361 RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSHVP 420
           RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVK+PLYIKDSH  
Sbjct: 361 RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKIPLYIKDSHAS 420

Query: 421 AISSNA 427
           AI+SNA
Sbjct: 421 AIASNA 423

[Close]

BLAST of Cmc11g0292541 vs. NCBI nr
Match: KAE8652323.1 (hypothetical protein Csa_021950 [Cucumis sativus])

HSP 1 Score: 790.8 bits (2041), Expect = 5.8e-225
Identity = 387/405 (95.56%), Postives = 389/405 (96.05%), Query Frame = 0


Query: 22  MASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTGSNSNDSKLLLGSPTGYLSGES 81
           MASS  QTLKPDL PQDLDDLLCS   KQ Q ESSSLT S SNDS  LLGSPTGYLS ES
Sbjct: 1   MASSLIQTLKPDLAPQDLDDLLCSPSHKQPQHESSSLTNSTSNDSTPLLGSPTGYLSRES 60

Query: 82  RIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGADAAYTPMLHSRIFTENEKYRN 141
           RIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGA+AAYTPMLHSRIFTENEKYRN
Sbjct: 61  RIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYRN 120

Query: 142 MEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLMD 201
           MEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLMD
Sbjct: 121 MEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLMD 180

Query: 202 NLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDG 261
           NLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDG
Sbjct: 181 NLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDG 240

Query: 262 KKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQETGVEGVLSAETLLENPALFAG 321
           KKFRANWSAISAVKNAVRIPVLANGNIRHMEDVN+CLQETGVEGVLSAETLLENPALFAG
Sbjct: 241 KKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNDCLQETGVEGVLSAETLLENPALFAG 300

Query: 322 FRTAEWIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPWRMIRSHVHKLLGDWFKIHPHI 381
           FRTAEWIEG EENTRDGNLDQADLLVDYLKLCEKYPVPWRMIRSHVHKLLGDWFKIHPHI
Sbjct: 301 FRTAEWIEGHEENTRDGNLDQADLLVDYLKLCEKYPVPWRMIRSHVHKLLGDWFKIHPHI 360

Query: 382 REDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSHVPAISSNA 427
           REDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSH  AISSNA
Sbjct: 361 REDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSHALAISSNA 405

[Close]

BLAST of Cmc11g0292541 vs. ExPASy Swiss-Prot
Match: Q8K582 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Rattus norvegicus OX=10116 GN=Dus1l PE=2 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.0e-78
Identity = 142/298 (47.65%), Postives = 193/298 (64.77%), Query Frame = 0


Query: 90  WTK-LGRPKLIVAPMVDNSELPFRLLCRKYGADAAYTPMLHSRIFTENEKYR--NMEFTT 149
           W++ LG  + +VAPMVD SEL +RLL R++GA   YTPMLH+++F  +  YR  N+    
Sbjct: 10  WSRALGGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCDV 69

Query: 150 CQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLMDNLPLV 209
           C EDRPL VQFCANDP+V ++AA   + YCD +DLNLGCPQ IA+RG YGAFL +   L+
Sbjct: 70  CPEDRPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGRYGAFLQEEWDLL 129

Query: 210 KAIVEKLASNLQVPVSCKIRIFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFRA 269
           + ++      L VPV+CKIR+FP +  T+ YA+MLE AGC LL VHGRT+++K      A
Sbjct: 130 QRMILLAHERLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPMAGTA 189

Query: 270 NWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQETGVEGVLSAETLLENPALFAGFRTAE 329
           +W  I AV+ AV IPV ANGNIR ++DV  C+Q+TGV+GV+SAE  L NPALF G   A 
Sbjct: 190 SWEHIKAVRKAVGIPVFANGNIRCLQDVERCIQDTGVQGVMSAEGNLHNPALFEGRSPAV 249

Query: 330 WIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPWRMIRSHVHKLLGDWFKIHPHIRED 385
           W                +L  +YL +  ++P P   +R+H+ KL     ++H  +RE+
Sbjct: 250 W----------------ELADEYLDIVRQHPCPLSYVRAHLFKLWHHTLQVHQQLREE 291

[Close]

BLAST of Cmc11g0292541 vs. ExPASy Swiss-Prot
Match: Q8C2P3 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Mus musculus OX=10090 GN=Dus1l PE=2 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.7e-78
Identity = 141/298 (47.32%), Postives = 194/298 (65.10%), Query Frame = 0


Query: 90  WTK-LGRPKLIVAPMVDNSELPFRLLCRKYGADAAYTPMLHSRIFTENEKYR--NMEFTT 149
           W++ LG  + +VAPMVD SEL +RLL R++GA   YTPMLH+++F  +  YR  N+    
Sbjct: 10  WSRTLGGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCDV 69

Query: 150 CQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLMDNLPLV 209
           C EDRPL VQFCANDP+V ++AA   + YCD +DLNLGCPQ IA+RG+YGAFL +   L+
Sbjct: 70  CPEDRPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLL 129

Query: 210 KAIVEKLASNLQVPVSCKIRIFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFRA 269
           + ++      L VPV+CKIR+FP +  T+ YA+MLE AGC LL VHGRT+++K      A
Sbjct: 130 QRMILLAHERLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPMAGTA 189

Query: 270 NWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQETGVEGVLSAETLLENPALFAGFRTAE 329
           +W  I AV+ AV IPV ANGNI+ ++DV  C+Q+TGV+GV+SAE  L NPALF G   A 
Sbjct: 190 SWEHIKAVRKAVGIPVFANGNIQCLQDVERCIQDTGVQGVMSAEGNLHNPALFEGRSPAV 249

Query: 330 WIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPWRMIRSHVHKLLGDWFKIHPHIRED 385
           W                +L  +YL +  ++P P   +R+H+ KL     ++H  +RE+
Sbjct: 250 W----------------ELAEEYLDIVRQHPCPLSYVRAHLFKLWHHTLQVHQQLREE 291

[Close]

BLAST of Cmc11g0292541 vs. ExPASy Swiss-Prot
Match: Q6P1R4 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Homo sapiens OX=9606 GN=DUS1L PE=1 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 8.5e-78
Identity = 139/288 (48.26%), Postives = 188/288 (65.28%), Query Frame = 0


Query: 99  IVAPMVDNSELPFRLLCRKYGADAAYTPMLHSRIFTENEKYR--NMEFTTCQEDRPLFVQ 158
           +VAPMVD SEL +RLL R++GA   YTPMLH+++F  +  YR  N+    C EDRPL VQ
Sbjct: 20  VVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEVCPEDRPLIVQ 79

Query: 159 FCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASN 218
           FCANDP+V ++AA   + YCD +DLNLGCPQ IA+RG+YGAFL D   L++ ++      
Sbjct: 80  FCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQRMILLAHEK 139

Query: 219 LQVPVSCKIRIFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKN 278
           L VPV+CKIR+FP +  T+ YA+MLE AGC LL VHGRT+++K      A+W  I AV+ 
Sbjct: 140 LSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAASWEHIKAVRK 199

Query: 279 AVRIPVLANGNIRHMEDVNNCLQETGVEGVLSAETLLENPALFAGFRTAEWIEGQEENTR 338
           AV IPV ANGNI+ ++DV  CL++TGV+GV+SAE  L NPALF G   A W         
Sbjct: 200 AVAIPVFANGNIQCLQDVERCLRDTGVQGVMSAEGNLHNPALFEGRSPAVW--------- 259

Query: 339 DGNLDQADLLVDYLKLCEKYPVPWRMIRSHVHKLLGDWFKIHPHIRED 385
                  +L  +YL +  ++P P   +R+H+ KL     ++H  +RE+
Sbjct: 260 -------ELAEEYLDIVREHPCPLSYVRAHLFKLWHHTLQVHQELREE 291

[Close]

BLAST of Cmc11g0292541 vs. ExPASy Swiss-Prot
Match: Q9HGN6 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dus1 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.1e-69
Identity = 138/302 (45.70%), Postives = 194/302 (64.24%), Query Frame = 0


Query: 90  WTKLGRPKLIVAPMVDNSELPFRLLCRKYGADAAYTPMLHSRIFTENEKYRNMEFT--TC 149
           + K+GRPK I+APMVD SELP+R+L R+ GAD  Y+PM HSR+F E+E YRN  F+  T 
Sbjct: 12  YNKIGRPKRILAPMVDQSELPWRILARRSGADLCYSPMFHSRLFGESEDYRNKVFSTRTI 71

Query: 150 QEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLMDNLPLVK 209
            E+RPL +QFC NDP+++L+AA+   PYCD VD+NLGCPQ IA++G YG+FL +N  L++
Sbjct: 72  PEERPLIIQFCGNDPEIMLKAAKIAAPYCDAVDVNLGCPQGIAKKGKYGSFLQENWNLIE 131

Query: 210 AIVEKLASNLQVPVSCKIRIFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFRAN 269
           +I+ KL + L +PV+ KIRIFP+ Q T++YA+M+  AG S+LAVHGR R++K      A+
Sbjct: 132 SIITKLHTELSIPVTAKIRIFPDPQKTLDYAKMILKAGASILAVHGRLREQKGHFTGIAD 191

Query: 270 WSAISAV-KNAVRIPVL-ANGNIRHMEDVNNCLQETGVEGVLSAETLLENPALFAGFRTA 329
           W  I  + KN     VL ANGNI H +D++ C++ TGV+GVLSAE  L NP +F      
Sbjct: 192 WEQIQMLRKNLPSETVLFANGNILHAQDIDRCIKYTGVDGVLSAEGSLYNPRIFLP---- 251

Query: 330 EWIEGQEENTRDGNLDQADLLVDYLKLCEKYPV-----PWRMIRSHVHKLLGDWFKIHPH 383
                    T    +D  D+  +YL +  ++ +         I+ H+ KL+     IH  
Sbjct: 252 ---PSSPLMTLYPRID--DMCEEYLNIIREFKLESDYSSLSAIKGHLFKLMRPLLSIHTD 304

[Close]

BLAST of Cmc11g0292541 vs. ExPASy Swiss-Prot
Match: P53759 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DUS1 PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 6.4e-65
Identity = 132/313 (42.17%), Postives = 191/313 (61.02%), Query Frame = 0


Query: 92  KLGRPKLIVAPMVDNSELPFRLLCRKYGADAAYTPMLHSRIFTENEKYRNMEFTT---CQ 151
           K+GRP  IVAPMVD SEL +R+L R+YGA  AYTPMLH+++F  ++KYR   +++     
Sbjct: 25  KIGRPTRIVAPMVDQSELAWRILSRRYGATLAYTPMLHAKLFATSKKYREDNWSSLDGSS 84

Query: 152 EDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLMDNLPLVKA 211
            DRPL VQFCANDP+ LL AA+ VE  CD VDLNLGCPQ IA++G+YG+FLM+   L+  
Sbjct: 85  VDRPLVVQFCANDPEYLLAAAKLVEDKCDAVDLNLGCPQGIAKKGHYGSFLMEEWDLIHN 144

Query: 212 IVEKLASNLQVPVSCKIRIFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFRANW 271
           ++  L  NL+VPV+ KIRIF + + ++NYA+M+ DAG   L VHGR R++K  K   ANW
Sbjct: 145 LINTLHKNLKVPVTAKIRIFDDCEKSLNYAKMVLDAGAQFLTVHGRVREQKGQKTGLANW 204

Query: 272 SAISAVKNAV--RIPVLANGNIRHMEDVNNCLQETGVEGVLSAETLLENPALFAGFRTAE 331
             I  +++ +       ANGNI + ED++ C++  G + V+SAE  L NP +F       
Sbjct: 205 ETIKYLRDNLPKETVFFANGNILYPEDISRCMEHIGADAVMSAEGNLYNPGVFN------ 264

Query: 332 WIEGQEENTRDGNLDQADLLV----DYLKLCEKYPVPWRMIRSHVHKLLGDWFKIHPHIR 391
              GQ +N ++    + D ++      +K C++       ++SH  K+L  +   H  IR
Sbjct: 265 --VGQTKN-KEKIFPRVDKIIREYFQIVKECQESKASKTAMKSHFFKILRPFLPHHTDIR 324

Query: 392 EDF-NAQSKLTFE 395
                  +K T+E
Sbjct: 325 STLATMNAKATWE 328

[Close]

BLAST of Cmc11g0292541 vs. ExPASy TrEMBL
Match: A0A1S3CHU6 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Cucumis melo OX=3656 GN=LOC103501114 PE=4 SV=1)

HSP 1 Score: 874.4 bits (2258), Expect = 1.9e-250
Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 0


Query: 1   MRSLSNSHLYLKTIFSLRNSFMASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTG 60
           MRSLSNSHLYLKTIFSLRNSFMASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTG
Sbjct: 1   MRSLSNSHLYLKTIFSLRNSFMASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTG 60

Query: 61  SNSNDSKLLLGSPTGYLSGESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGA 120
           SNSNDSKLLLGSPTGYLSGESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGA
Sbjct: 61  SNSNDSKLLLGSPTGYLSGESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGA 120

Query: 121 DAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD 180
           DAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD
Sbjct: 121 DAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD 180

Query: 181 LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM 240
           LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM
Sbjct: 181 LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM 240

Query: 241 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQE 300
           LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQE
Sbjct: 241 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQE 300

Query: 301 TGVEGVLSAETLLENPALFAGFRTAEWIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPW 360
           TGVEGVLSAETLLENPALFAGFRTAEWIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPW
Sbjct: 301 TGVEGVLSAETLLENPALFAGFRTAEWIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPW 360

Query: 361 RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSHVP 420
           RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSHVP
Sbjct: 361 RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSHVP 420

Query: 421 AISSNA 427
           AISSNA
Sbjct: 421 AISSNA 426

[Close]

BLAST of Cmc11g0292541 vs. ExPASy TrEMBL
Match: A0A0A0LTG2 (Dus domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G428390 PE=4 SV=1)

HSP 1 Score: 819.3 bits (2115), Expect = 7.4e-234
Identity = 404/426 (94.84%), Postives = 407/426 (95.54%), Query Frame = 0


Query: 1   MRSLSNSHLYLKTIFSLRNSFMASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTG 60
           MRSLSNSHL+LK IFSL NS MASS  QTLKPDL PQDLDDLLCS   KQ Q ESSSLT 
Sbjct: 1   MRSLSNSHLHLKYIFSLPNSLMASSLIQTLKPDLAPQDLDDLLCSPSHKQPQHESSSLTN 60

Query: 61  SNSNDSKLLLGSPTGYLSGESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGA 120
           S SNDS  LLGSPTGYLS ESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGA
Sbjct: 61  STSNDSTPLLGSPTGYLSRESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGA 120

Query: 121 DAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD 180
           +AAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD
Sbjct: 121 EAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD 180

Query: 181 LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM 240
           LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM
Sbjct: 181 LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM 240

Query: 241 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQE 300
           LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVN+CLQE
Sbjct: 241 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNDCLQE 300

Query: 301 TGVEGVLSAETLLENPALFAGFRTAEWIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPW 360
           TGVEGVLSAETLLENPALFAGFRTAEWIEG EENTRDGNLDQADLLVDYLKLCEKYPVPW
Sbjct: 301 TGVEGVLSAETLLENPALFAGFRTAEWIEGHEENTRDGNLDQADLLVDYLKLCEKYPVPW 360

Query: 361 RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSHVP 420
           RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSH  
Sbjct: 361 RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSHAL 420

Query: 421 AISSNA 427
           AISSNA
Sbjct: 421 AISSNA 426

[Close]

BLAST of Cmc11g0292541 vs. ExPASy TrEMBL
Match: A0A5A7VJ66 (tRNA-dihydrouridine(16/17) synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00480 PE=4 SV=1)

HSP 1 Score: 800.8 bits (2067), Expect = 2.7e-228
Identity = 405/486 (83.33%), Postives = 405/486 (83.33%), Query Frame = 0


Query: 22  MASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTGSNSNDSKLLLGSPTGYLSGES 81
           MASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTGSNSNDSKLLLGSPTGYLSGES
Sbjct: 1   MASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTGSNSNDSKLLLGSPTGYLSGES 60

Query: 82  RIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGADAAYTPMLHSRIFTENEKYRN 141
           RIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGADAAYTPMLHSRIFTENEKYRN
Sbjct: 61  RIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGADAAYTPMLHSRIFTENEKYRN 120

Query: 142 MEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLG----------------- 201
           MEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLG                 
Sbjct: 121 MEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGELDTEELPSIVKILEDV 180

Query: 202 ------------------------------------------------------------ 261
                                                                       
Sbjct: 181 TLSQTKHCPYHLASWWGHGLIELNSTVSSLASHSAAMLVGGFFLYVFLSKVPEHLLSSRV 240

Query: 262 ----CPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM 321
               CPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM
Sbjct: 241 ISCRCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM 300

Query: 322 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQE 381
           LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQE
Sbjct: 301 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQE 360

Query: 382 TGVEGVLSAETLLENPALFAGFRTAEWIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPW 427
           TGVEGVLSAETLLENPALFAGFRTAEWIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPW
Sbjct: 361 TGVEGVLSAETLLENPALFAGFRTAEWIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPW 420

[Close]

BLAST of Cmc11g0292541 vs. ExPASy TrEMBL
Match: A0A6J1FWR0 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Cucurbita moschata OX=3662 GN=LOC111448913 PE=4 SV=1)

HSP 1 Score: 781.2 bits (2016), Expect = 2.2e-222
Identity = 387/424 (91.27%), Postives = 401/424 (94.58%), Query Frame = 0


Query: 1   MRSLSNSHLYLKTIFSLRNSFMASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTG 60
           MRS SNSHL+LK+I SLR SFMASSFTQT   D  PQDLDDLLCS P  Q QDE SSLT 
Sbjct: 1   MRSPSNSHLHLKSILSLRKSFMASSFTQT---DF-PQDLDDLLCSDPHTQPQDECSSLT- 60

Query: 61  SNSNDSKLLLGSPTGYLSGESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGA 120
             SNDS LLLGSP+GYLSGESRIERAWAHW+KLGRPKLIVAPMVDNSELPFRLLCRKYGA
Sbjct: 61  -KSNDSTLLLGSPSGYLSGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGA 120

Query: 121 DAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD 180
           +AAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD
Sbjct: 121 EAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD 180

Query: 181 LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM 240
           LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEK+ASNLQVPVSCKIR+FPNLQDTINYARM
Sbjct: 181 LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARM 240

Query: 241 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQE 300
           LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNA+RIPVLANGNIRHMEDV+NCLQE
Sbjct: 241 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNALRIPVLANGNIRHMEDVHNCLQE 300

Query: 301 TGVEGVLSAETLLENPALFAGFRTAEWIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPW 360
           TGVEGVLSAETLLENPALFAGFRTA+W  G EE++RDGNLDQADLLVDYLKLCEKYPVPW
Sbjct: 301 TGVEGVLSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPW 360

Query: 361 RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSHVP 420
           RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVE+LRELQVK+PLYIKDS   
Sbjct: 361 RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVEQLRELQVKIPLYIKDSPAS 418

Query: 421 AISS 425
           AISS
Sbjct: 421 AISS 418

[Close]

BLAST of Cmc11g0292541 vs. ExPASy TrEMBL
Match: A0A6J1JGU3 (tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Cucurbita maxima OX=3661 GN=LOC111484251 PE=4 SV=1)

HSP 1 Score: 779.2 bits (2011), Expect = 8.5e-222
Identity = 386/424 (91.04%), Postives = 399/424 (94.10%), Query Frame = 0


Query: 1   MRSLSNSHLYLKTIFSLRNSFMASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTG 60
           MRS SNSHL+LK+I SLR SFMASS  QT   D  PQDLDDLLCS P  QRQDE SSLT 
Sbjct: 1   MRSPSNSHLHLKSILSLRKSFMASSCAQT---DF-PQDLDDLLCSDPHTQRQDECSSLT- 60

Query: 61  SNSNDSKLLLGSPTGYLSGESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGA 120
             SNDS LLLGSP+GYL+GESRIERAWAHW+KLGRPKLIVAPMVDNSELPFRLLCRKYGA
Sbjct: 61  -KSNDSTLLLGSPSGYLNGESRIERAWAHWSKLGRPKLIVAPMVDNSELPFRLLCRKYGA 120

Query: 121 DAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD 180
           +AAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD
Sbjct: 121 EAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVD 180

Query: 181 LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARM 240
           LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEK+ASNLQVPVSCKIR+FPNLQDTINYARM
Sbjct: 181 LNLGCPQRIARRGNYGAFLMDNLPLVKAIVEKVASNLQVPVSCKIRVFPNLQDTINYARM 240

Query: 241 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQE 300
           LEDAGCSLLAVHGRTRDEKDGKKFRANWSAI AVKNA+RIPVLANGNIRHMEDVNNCLQE
Sbjct: 241 LEDAGCSLLAVHGRTRDEKDGKKFRANWSAIRAVKNALRIPVLANGNIRHMEDVNNCLQE 300

Query: 301 TGVEGVLSAETLLENPALFAGFRTAEWIEGQEENTRDGNLDQADLLVDYLKLCEKYPVPW 360
           TGVEGVLSAETLLENPALFAGFRTA+W  G EE++RDGNLDQADLLVDYLKLCEKYPVPW
Sbjct: 301 TGVEGVLSAETLLENPALFAGFRTAQWTAGCEESSRDGNLDQADLLVDYLKLCEKYPVPW 360

Query: 361 RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIKDSHVP 420
           RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVK+PLYIKDS   
Sbjct: 361 RMIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKIPLYIKDSPAS 418

Query: 421 AISS 425
           AISS
Sbjct: 421 AISS 418

[Close]

BLAST of Cmc11g0292541 vs. TAIR 10
Match: AT5G67220.1 (FMN-linked oxidoreductases superfamily protein )

HSP 1 Score: 612.1 bits (1577), Expect = 3.5e-175
Identity = 304/414 (73.43%), Postives = 347/414 (83.82%), Query Frame = 0


Query: 3   SLSNSHLYLKTIFSLRNSFMASSFTQTLKPDLPPQDLDDLLCSHPQKQRQDESSSLTGSN 62
           +LSN   +L+T  SL +   A +     KPD P Q LDD+LCS  Q+  Q E +  T   
Sbjct: 4   NLSNLR-FLRTRKSLISQTRAMTQNPDPKPD-PSQVLDDILCSE-QRDGQIEETVDTAPA 63

Query: 63  SNDSKLLLGSPTGYLSGESRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGADA 122
           S      LGSP+  LS ++R+ERAWAHW KLGRPK IVAPMVDNSELPFRLLC+KYGA A
Sbjct: 64  S------LGSPSRVLSIDTRVERAWAHWKKLGRPKYIVAPMVDNSELPFRLLCQKYGAQA 123

Query: 123 AYTPMLHSRIFTENEKYRNMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLN 182
           AYTPMLHSRIFTE EKYRN EFTTC+EDRPLFVQFCANDPD LLEAA+RVEPYCDYVD+N
Sbjct: 124 AYTPMLHSRIFTETEKYRNQEFTTCKEDRPLFVQFCANDPDTLLEAAKRVEPYCDYVDIN 183

Query: 183 LGCPQRIARRGNYGAFLMDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARMLE 242
           LGCPQRIARRGNYGAFLMDNLPLVK++VEKLA NL VPVSCKIRIFPNL+DT+ YA+MLE
Sbjct: 184 LGCPQRIARRGNYGAFLMDNLPLVKSLVEKLAQNLNVPVSCKIRIFPNLEDTLKYAKMLE 243

Query: 243 DAGCSLLAVHGRTRDEKDGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQETG 302
           DAGCSLLAVHGRTRDEKDGKKFRA+WSAI  VKNA+RIPVLANGN+R +EDV+NC++ETG
Sbjct: 244 DAGCSLLAVHGRTRDEKDGKKFRADWSAIKEVKNAMRIPVLANGNVRCIEDVDNCIKETG 303

Query: 303 VEGVLSAETLLENPALFAGFRTAEWI-EGQEENTRDGNLDQADLLVDYLKLCEKYPVPWR 362
           VEGVLSAETLLENPA FAGFRTAEW  + +EE   DG LDQ DL+V+YLKLCEK+PVPWR
Sbjct: 304 VEGVLSAETLLENPAAFAGFRTAEWAKDNEEEGFVDGGLDQGDLVVEYLKLCEKHPVPWR 363

Query: 363 MIRSHVHKLLGDWFKIHPHIREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIK 416
           MIRSHVHK+LG+WF+IHP +RE  NAQ+ LTFEFLY +V++LREL  ++PLY K
Sbjct: 364 MIRSHVHKMLGEWFRIHPQVREQLNAQNILTFEFLYGLVDQLRELGGRVPLYKK 408

[Close]

BLAST of Cmc11g0292541 vs. TAIR 10
Match: AT3G49640.1 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 132.1 bits (331), Expect = 1.1e-30
Identity = 83/265 (31.32%), Postives = 130/265 (49.06%), Query Frame = 0


Query: 97  KLIVAPMVDNSELPFRLLCRKYGADAAYTPMLHSRIFTENEKYRNME------------- 156
           KL++APMV    L FR+L  +YGAD  Y   +      + E+  N+              
Sbjct: 6   KLVLAPMVRVGTLSFRMLAAEYGADITYGEEIIDHKLVKCERRLNVASGTSEFVEKGTDN 65

Query: 157 --FTTCQEDRPLFV-QFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLM 216
             F+TC E++   V Q   +D    L+A+  V      +D+N+GCP+  + +G  GA L+
Sbjct: 66  VVFSTCDEEKSRVVFQMGTSDAVRALKASEIVCNDVATIDINMGCPKAFSIQGGMGAALL 125

Query: 217 DNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKD 276
               L+  I+  L  NL VPV+CKIR+  +  DT+  AR +E  G   LAVHG  R   D
Sbjct: 126 SKPELIHDILATLKRNLDVPVTCKIRLLKSPADTVELARRIEKLGVPALAVHG--RKIAD 185

Query: 277 GKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQETGVEGVLSAETLLENPALFA 336
             +  A W  I+ V  A+ IPV+ANG++   +D +     TG   V+ A   + N ++F+
Sbjct: 186 RPRDPAKWDEIADVVAALSIPVIANGDVLEYDDFSRIKTATGAASVMVARGAMWNASIFS 245

Query: 337 GFRTAEWIEGQEENTRDGNLDQADL 346
               + W + +++  R   L   D+
Sbjct: 246 PKGKSHWEDVKKKYLRKSILWNNDV 268

[Close]

BLAST of Cmc11g0292541 vs. TAIR 10
Match: AT3G49640.2 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 113.2 bits (282), Expect = 5.0e-25
Identity = 67/206 (32.52%), Postives = 107/206 (51.94%), Query Frame = 0


Query: 141 NMEFTTCQEDRPLFV-QFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFL 200
           N+ F+TC E++   V Q   +D    L+A+  V      +D+N+GCP+  + +G  GA L
Sbjct: 26  NVVFSTCDEEKSRVVFQMGTSDAVRALKASEIVCNDVATIDINMGCPKAFSIQGGMGAAL 85

Query: 201 MDNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARMLEDAGCSLLAVHGRTRDEK 260
           +    L+  I+  L  NL VPV+CKIR+  +  DT+  AR +E  G   LAVHG  R   
Sbjct: 86  LSKPELIHDILATLKRNLDVPVTCKIRLLKSPADTVELARRIEKLGVPALAVHG--RKIA 145

Query: 261 DGKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNNCLQETGVEGVLSAETLLENPALF 320
           D  +  A W  I+ V  A+ IPV+ANG++   +D +     TG   V+ A   + N ++F
Sbjct: 146 DRPRDPAKWDEIADVVAALSIPVIANGDVLEYDDFSRIKTATGAASVMVARGAMWNASIF 205

Query: 321 AGFRTAEWIEGQEENTRDGNLDQADL 346
           +    + W + +++  R   L   D+
Sbjct: 206 SPKGKSHWEDVKKKYLRKSILWNNDV 229

[Close]

BLAST of Cmc11g0292541 vs. TAIR 10
Match: AT4G38890.1 (FMN-linked oxidoreductases superfamily protein )

HSP 1 Score: 84.3 bits (207), Expect = 2.5e-16
Identity = 55/207 (26.57%), Postives = 95/207 (45.89%), Query Frame = 0


Query: 95  RPKLIVAPMVDNSELPFRLLCRKYGADAAYTPMLHSRIFTENEKYRNMEFTTCQEDRPLF 154
           R KL +AP+     LPFR LC+  GAD     M       + +            +    
Sbjct: 337 RDKLYLAPLTTVGNLPFRRLCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFG 396

Query: 155 VQFCANDPDVLLEAARRVEPYC--DYVDLNLGCPQRIARRGNYGAFLMDNLPLVKAIVEK 214
           VQ C + PD +      ++  C  D++D+N+GCP  +    + G+ L++    +K IVE 
Sbjct: 397 VQICGSYPDTVSRVVELIDRECTVDFIDINMGCPIDMVVNKSAGSALLNKPLRMKNIVEV 456

Query: 215 LASNLQVPVSCKIR--IFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFRANWSA 274
            +S ++ P++ K+R   F       +    + + G + + +HGR+R ++  K   A+W  
Sbjct: 457 SSSIVETPITIKVRTAFFEGKNRIDSLIADIGNWGATAVTIHGRSRQQRYSKS--ADWDY 516

Query: 275 I-SAVKNA-VRIPVLANGNIRHMEDVN 296
           I    KNA   + V+ NG++    D N
Sbjct: 517 IYQCTKNATTNLQVIGNGDVYSYLDWN 541

[Close]

BLAST of Cmc11g0292541 vs. TAIR 10
Match: AT3G63510.1 (FMN-linked oxidoreductases superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 1.2e-10
Identity = 67/249 (26.91%), Postives = 98/249 (39.36%), Query Frame = 0


Query: 96  PKLIVAPMVDNSELPFRLLCRKYGADA-AYTPMLHSRIFTENEKYRNMEFTTCQEDRPLF 155
           P   VAPM+D ++  +R L R     A  YT M+ +      +   +       +  P+ 
Sbjct: 52  PSFSVAPMMDWTDNHYRTLARLITKHAWLYTEMIAAETLVHQQTNLDRFLAFSPQQHPIV 111

Query: 156 VQFCANDPDVLLEAARRVEPY-CDYVDLNLGCPQ-RIARRGNYGAFLMDNLPLVKAIVEK 215
           +Q   ++ + L +AA+  + Y  D ++LN GCP  ++A  G +G  LM    LV   +  
Sbjct: 112 LQLGGSNVENLAKAAKLSDAYGYDEINLNCGCPSPKVAGHGCFGVSLMLKPKLVGEAMSA 171

Query: 216 LASNLQVPVSCKIRI-------FPNLQDTINYARMLEDAGCSLLAVHGRTRDEKDGKKFR 275
           +A+N  VPV+ K RI       +  L D I     L         VH R          +
Sbjct: 172 IAANTNVPVTVKCRIGVDNHDSYDELCDFIYKVSTLSPT--RHFIVHSR----------K 231

Query: 276 ANWSAISAVKNAVRIPVL------------------ANGNIRHMEDVNNCLQETGVEGVL 317
           A    IS   N  RIP L                   NG I  +  VN  L+E G  GV+
Sbjct: 232 ALLGGISPADNR-RIPPLKYEYYYALVRDFPDLRFTINGGITSVSKVNAALKE-GAHGVM 286

The following BLAST results are available for this feature:

BLAST of Cmc11g0292541 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462837.1	4.0e-250	100.00	PREDICTED: tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Cucumis melo]	[more]
XP_011650036.1	1.5e-233	94.84	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Cucumis sativus]	[more]
KAA0066396.1	5.6e-228	83.33	tRNA-dihydrouridine(16/17) synthase [Cucumis melo var. makuwa] >TYK00889.1 tRNA-...	[more]
XP_038901742.1	1.4e-226	92.02	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Benincasa hispida]	[more]
KAE8652323.1	5.8e-225	95.56	hypothetical protein Csa_021950 [Cucumis sativus]	[more]

BLAST of Cmc11g0292541 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8K582	1.0e-78	47.65	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Rattus norvegicus OX=101...	[more]
Q8C2P3	1.7e-78	47.32	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Mus musculus OX=10090 GN...	[more]
Q6P1R4	8.5e-78	48.26	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Homo sapiens OX=9606 GN=...	[more]
Q9HGN6	1.1e-69	45.70	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] OS=Schizosaccharomyces pombe (st...	[more]
P53759	6.4e-65	42.17	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] OS=Saccharomyces cerevisiae (str...	[more]

BLAST of Cmc11g0292541 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CHU6	1.9e-250	100.00	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0LTG2	7.4e-234	94.84	Dus domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G428390 PE=4 SV...	[more]
A0A5A7VJ66	2.7e-228	83.33	tRNA-dihydrouridine(16/17) synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1FWR0	2.2e-222	91.27	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1JGU3	8.5e-222	91.04	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of Cmc11g0292541 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67220.1	3.5e-175	73.43	FMN-linked oxidoreductases superfamily protein	[more]
AT3G49640.1	1.1e-30	31.32	Aldolase-type TIM barrel family protein	[more]
AT3G49640.2	5.0e-25	32.52	Aldolase-type TIM barrel family protein	[more]
AT4G38890.1	2.5e-16	26.57	FMN-linked oxidoreductases superfamily protein	[more]
AT3G63510.1	1.2e-10	26.91	FMN-linked oxidoreductases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035587	DUS-like, FMN-binding domain	PFAM	PF01207	Dus	coord: 99..390 e-value: 6.3E-74 score: 248.8
IPR035587	DUS-like, FMN-binding domain	CDD	cd02801	DUS_like_FMN	coord: 97..327 e-value: 3.99586E-108 score: 316.744
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70	Aldolase class I	coord: 95..328 e-value: 1.5E-80 score: 271.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..67
None	No IPR available	PANTHER	PTHR11082	TRNA-DIHYDROURIDINE SYNTHASE	coord: 77..416
None	No IPR available	PANTHER	PTHR11082:SF35	BNAA09G07510D PROTEIN	coord: 77..416
None	No IPR available	SUPERFAMILY	51395	FMN-linked oxidoreductases	coord: 96..372
IPR018517	tRNA-dihydrouridine synthase, conserved site	PROSITE	PS01136	UPF0034	coord: 179..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0292541.1	Cmc11g0292541.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002943	tRNA dihydrouridine synthesis
biological_process	GO:0008033	tRNA processing
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0017150	tRNA dihydrouridine synthase activity
molecular_function	GO:0003824	catalytic activity