Cmc11g0292301 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0292301
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionFlocculation protein FLO11-like
LocationCMiso1.1chr11: 7887669 .. 7889186 (-)
RNA-Seq ExpressionCmc11g0292301
SyntenyCmc11g0292301
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCCCTCTGTTTGGAGGATAATGCACATAAGTGGAAGAATGTGGTCCATTGTCGTATTGCTAATGAATCTACTATATCTAATAAACATCATTCTTGCACTCATGTTATTGATCTGATGAATAGGATTAGTCTTCTTCCTACCATCACTGAGGTTGGTCTCTTCTATCTTTAGTTGATTTAAAGTTTATTGTAAATTTGCCTACTAATCTGAATGACCCTGGTGCTGCGGAGTATCAAAAAGTGCATGTTCGTGGTTTATGTTTCAACATCTCTTATGCTCTTCTCAATGCTTGCTGATTTTTTAGTAGTTCTTTCGTCTCCTGGGCAATTGGCTTTGGAGCTATCTTGTGACACTCTACGTTCTTGGCCTACCGATGGTCAATTGCCTACTGTTAAGCTTAGTGTTAAAGATGCCATTTTGCAAAAAAATTGGCATTTCTAATTGGTACCCATTCTCTCATGTATCCACTATCACTACCATTCTTGCCAATTTAATCTTTTTGGTTGGTACTGGTTCCAAGGTGGATGTTGGTGACTTTATATTTCGACTGTGTGTTGCGGCATGTGGTTACGTTTGGTATCAACATCTCTATTCTTTTCCTTCGACTTTTGTGTGAGTTTTTGCTATCCTAACATTTGTCCTTTCTCAATGAAACTGACATTGCTGGTCCAACTCTCAAAGTTTTATCTCTCAGTTTTATCAGTAGTTTCAATGGTCCCATGTGCCTGATCTTCATGCCAGTTTTCGTCCTCCTCGGTCTGAACCTCAGTTGTTTATTGCTGATATGAGAATTTCATCTATTGGGTTAGTGTTATCTTATAAATTGGCGTCTTGTGTGGTTTAGCTGCTCTCTGATGAATCTTGGACTCTTAGTGTTTCTATACAGTTTATAAGGAGTGGACAATGATCTGTTTGGTAGACGATTTCTGTTGATTCTATGCCTCATGTTTTTCATTTCTTAATTGTTGAGTCTTAGAAGAGGCCTTCTGATTCTTCTGGTCCTGCTTCTTAGTTTATTTGTCAGCCAACAAGGGGGAGTTTTTTTTGTTTTTGTTTGGTTCCTTGCTTTATTTTGTGTGAAGTTTGTTATTTTGATCTCAATACAGCAGAACAATTCTATTTTTTTTTCTTGCTTCTTATTCAGGGTGTTGATTTAGTCTTTTGGAATGAAATGAGAAATGGTGTTATGGTTTCTGGTTGGTTTCTTCAATTTCTCTGTTTGTTGTATGTTGTTTTATTCTGTGCTCTGACTATTCTTCTCTCTATTTGTGGTTGTGATTGGTTGGTGTACTTGTCTAAACAAATAAAGGAAGATGGTCCTAAGGGGGAGTTTGTTGTGTGGTGATCCCACTTTCTGATATTTATTTATTATTATATTTTGAGAAAATATCTTTGTTTTGACTACGTTTGTTAAGATTGTTTCTGGTTGTTGAGATTTGTTTCTACTTTTGTGGGTAATTGGTTGTTTCTCGGGCATTGGGTTTTTATCTTTCTGTGTTATGGTTCCTTTGGGTGT

mRNA sequence

TTTCCCTCTGTTTGGAGGATAATGCACATAAGTGGAAGAATGTGGTCCATTGTCGTATTGCTAATGAATCTACTATATCTAATAAACATCATTCTTGCACTCATGTTATTGATCTGATGAATAGGATTAGTCTTCTTCCTACCATCACTGAGGTTGGTCTCTTCTATCTTTAGTTGATTTAAAGTTTATTGTAAATTTGCCTACTAATCTGAATGACCCTGGTGCTGCGGAGTATCAAAAAGTGCATGTTCGTGGTTTATGTTTCAACATCTCTTATGCTCTTCTCAATGCTTGCTGATTTTTTAGTAGTTCTTTCGTCTCCTGGGCAATTGGCTTTGGAGCTATCTTGTGACACTCTACGTTCTTGGCCTACCGATGGTCAATTGCCTACTGTTAAGCTTAGTGTTAAAGATGCCATTTTGCAAAAAAATTGGCATTTCTAATTGGTACCCATTCTCTCATGTATCCACTATCACTACCATTCTTGCCAATTTAATCTTTTTGGTTGGTACTGGTTCCAAGGTGGATGTTGGTGACTTTATATTTCGACTGTGTGTTGCGGCATGTGGTTACGTTTGGTATCAACATCTCTATTCTTTTCCTTCGACTTTTGTTTTTATCAGTAGTTTCAATGGTCCCATGTGCCTGATCTTCATGCCAGTTTTCGTCCTCCTCGGTCTGAACCTCAGTTGTTTATTGCTGATATGAGAATTTCATCTATTGGGTTAGTGTTATCTTATAAATTGGCGTCTTGTGTGGTTTAGCTGCTCTCTGATGAATCTTGGACTCTTAGTGTTTCTATACAGTTTATAAGGAGTGGACAATGATCTGTTTGGTAGACGATTTCTGTTGATTCTATGCCTCATGTTTTTCATTTCTTAATTGTTGAGTCTTAGAAGAGGCCTTCTGATTCTTCTGGTCCTGCTTCTTAGTTTATTTGTCAGCCAACAAGGGGGAGTTTTTTTTGTTTTTGTTTGGTTCCTTGCTTTATTTTGTGTGAAGTTTGTTATTTTGATCTCAATACAGCAGAACAATTCTATTTTTTTTTCTTGCTTCTTATTCAGGGTGTTGATTTAGTCTTTTGGAATGAAATGAGAAATGGTGTTATGGTTTCTGATTGTTTCTGGTTGTTGAGATTTGTTTCTACTTTTGTGGGTAATTGGTTGTTTCTCGGGCATTGGGTTTTTATCTTTCTGTGTTATGGTTCCTTTGGGTGT

Coding sequence (CDS)

ATGGTCAATTGCCTACTGTTAAGCTTAGTGTTAAAGATGCCATTTTGCAAAAAAATTGGCATTTCTAATTGGTACCCATTCTCTCATGTATCCACTATCACTACCATTCTTGCCAATTTAATCTTTTTGGTTGGTACTGGTTCCAAGGTGGATGTTGGTGACTTTATATTTCGACTGTGTGTTGCGGCATGTGGTTACGTTTGGTATCAACATCTCTATTCTTTTCCTTCGACTTTTGTTTTTATCAGTAGTTTCAATGGTCCCATGTGCCTGATCTTCATGCCAGTTTTCGTCCTCCTCGGTCTGAACCTCAGTTGTTTATTGCTGATATGA

Protein sequence

MVNCLLLSLVLKMPFCKKIGISNWYPFSHVSTITTILANLIFLVGTGSKVDVGDFIFRLCVAACGYVWYQHLYSFPSTFVFISSFNGPMCLIFMPVFVLLGLNLSCLLLI
Homology
[Close]
BLAST of Cmc11g0292301 vs. NCBI nr
Match: XP_008461540.2 (PREDICTED: uncharacterized protein LOC103500112 [Cucumis melo])

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-07
Identity = 31/63 (49.21%), Postives = 45/63 (71.43%), Query Frame = 0 

Query: 6   LLSLVLKMPFCKKIGISNWYPFSHVSTITTILANLIFLVGTGSKVDVGDFIFRLCVAACG 65
           ++ L +K     KIGIS+W+P  H+ST++T LANL++L+GTGS VDVGD ++      CG
Sbjct: 224 IMKLSVKYVILHKIGISSWHPTPHLSTVSTTLANLLYLIGTGSHVDVGDLVYPYS-QTCG 283

Query: 66  YVW 69
           YV+
Sbjct: 284 YVY 285

[Close]
BLAST of Cmc11g0292301 vs. NCBI nr
Match: XP_008458113.1 (PREDICTED: uncharacterized protein LOC103497643 [Cucumis melo])

HSP 1 Score: 65.9 bits (159), Expect = 2.6e-07
Identity = 27/48 (56.25%), Postives = 38/48 (79.17%), Query Frame = 0 

Query: 11  LKMPFCKKIGISNWYPFSHVSTITTILANLIFLVGTGSKVDVGDFIFR 59
           +K     KIGI+NW+P +H+S ++T L N +FL+GTGSK+DVGDFIF+
Sbjct: 305 IKYAILHKIGITNWHPTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFK 352

[Close]
BLAST of Cmc11g0292301 vs. NCBI nr
Match: KAA0051667.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 4.4e-07
Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 0 

Query: 3   NCLLLSLVLKMPFCKKIGISNWYPFSHVSTITTILANLIFLVGTGSKVDVGDFIFR 59
           N  ++ L +K     KI I+NW+P SH+STI+T LANLI+LVGTGSKV+VGD I++
Sbjct: 379 NFSVMKLSIKHVILYKIYITNWHPTSHLSTISTTLANLIYLVGTGSKVNVGDLIYQ 434

[Close]
BLAST of Cmc11g0292301 vs. NCBI nr
Match: KAA0065347.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 2.8e-06
Identity = 29/54 (53.70%), Postives = 39/54 (72.22%), Query Frame = 0 

Query: 5   LLLSLVLKMPFCKKIGISNWYPFSHVSTITTILANLIFLVGTGSKVDVGDFIFR 59
           L+ SL +K     +IGISNW P +H STI+T L + ++LVGTG KV+VG FIF+
Sbjct: 605 LVASLTVKYAILHRIGISNWIPSTHASTISTFLGHFVYLVGTGVKVNVGKFIFK 658

[Close]
BLAST of Cmc11g0292301 vs. NCBI nr
Match: XP_008452349.1 (PREDICTED: uncharacterized protein LOC103493408 [Cucumis melo])

HSP 1 Score: 60.8 bits (146), Expect = 8.2e-06
Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = 0 

Query: 8   SLVLKMPFCKKIGISNWYPFSHVSTITTILANLIFLVGTGSKVDVGDFIF 58
           SL +K     +IGISNW PF+H ST +T + + ++LVGTG KV+VG+FIF
Sbjct: 226 SLTVKYAILHRIGISNWIPFNHSSTTSTSMGHFVYLVGTGVKVNVGEFIF 275

[Close]
BLAST of Cmc11g0292301 vs. ExPASy TrEMBL
Match: A0A1S3CEZ2 (uncharacterized protein LOC103500112 OS=Cucumis melo OX=3656 GN=LOC103500112 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 5.6e-08
Identity = 31/63 (49.21%), Postives = 45/63 (71.43%), Query Frame = 0 

Query: 6   LLSLVLKMPFCKKIGISNWYPFSHVSTITTILANLIFLVGTGSKVDVGDFIFRLCVAACG 65
           ++ L +K     KIGIS+W+P  H+ST++T LANL++L+GTGS VDVGD ++      CG
Sbjct: 224 IMKLSVKYVILHKIGISSWHPTPHLSTVSTTLANLLYLIGTGSHVDVGDLVYPYS-QTCG 283

Query: 66  YVW 69
           YV+
Sbjct: 284 YVY 285

[Close]
BLAST of Cmc11g0292301 vs. ExPASy TrEMBL
Match: A0A1S3C780 (uncharacterized protein LOC103497643 OS=Cucumis melo OX=3656 GN=LOC103497643 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.2e-07
Identity = 27/48 (56.25%), Postives = 38/48 (79.17%), Query Frame = 0 

Query: 11  LKMPFCKKIGISNWYPFSHVSTITTILANLIFLVGTGSKVDVGDFIFR 59
           +K     KIGI+NW+P +H+S ++T L N +FL+GTGSK+DVGDFIF+
Sbjct: 305 IKYAILHKIGITNWHPTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFK 352

[Close]
BLAST of Cmc11g0292301 vs. ExPASy TrEMBL
Match: A0A5A7UBA4 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G00390 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.1e-07
Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 0 

Query: 3   NCLLLSLVLKMPFCKKIGISNWYPFSHVSTITTILANLIFLVGTGSKVDVGDFIFR 59
           N  ++ L +K     KI I+NW+P SH+STI+T LANLI+LVGTGSKV+VGD I++
Sbjct: 379 NFSVMKLSIKHVILYKIYITNWHPTSHLSTISTTLANLIYLVGTGSKVNVGDLIYQ 434

[Close]
BLAST of Cmc11g0292301 vs. ExPASy TrEMBL
Match: A0A5A7VE32 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold301G00200 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.4e-06
Identity = 29/54 (53.70%), Postives = 39/54 (72.22%), Query Frame = 0 

Query: 5   LLLSLVLKMPFCKKIGISNWYPFSHVSTITTILANLIFLVGTGSKVDVGDFIFR 59
           L+ SL +K     +IGISNW P +H STI+T L + ++LVGTG KV+VG FIF+
Sbjct: 605 LVASLTVKYAILHRIGISNWIPSTHASTISTFLGHFVYLVGTGVKVNVGKFIFK 658

[Close]
BLAST of Cmc11g0292301 vs. ExPASy TrEMBL
Match: A0A1S3BUF5 (uncharacterized protein LOC103493408 OS=Cucumis melo OX=3656 GN=LOC103493408 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 4.0e-06
Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = 0 

Query: 8   SLVLKMPFCKKIGISNWYPFSHVSTITTILANLIFLVGTGSKVDVGDFIF 58
           SL +K     +IGISNW PF+H ST +T + + ++LVGTG KV+VG+FIF
Sbjct: 226 SLTVKYAILHRIGISNWIPFNHSSTTSTSMGHFVYLVGTGVKVNVGEFIF 275

The following BLAST results are available for this feature:
BLAST of Cmc11g0292301 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008461540.21.2e-0749.21PREDICTED: uncharacterized protein LOC103500112 [Cucumis melo][more]
XP_008458113.12.6e-0756.25PREDICTED: uncharacterized protein LOC103497643 [Cucumis melo][more]
KAA0051667.14.4e-0757.14flocculation protein FLO11-like [Cucumis melo var. makuwa][more]
KAA0065347.12.8e-0653.70putative mitochondrial protein [Cucumis melo var. makuwa][more]
XP_008452349.18.2e-0654.00PREDICTED: uncharacterized protein LOC103493408 [Cucumis melo][more]
BLAST of Cmc11g0292301 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc11g0292301 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CEZ25.6e-0849.21uncharacterized protein LOC103500112 OS=Cucumis melo OX=3656 GN=LOC103500112 PE=... [more]
A0A1S3C7801.2e-0756.25uncharacterized protein LOC103497643 OS=Cucumis melo OX=3656 GN=LOC103497643 PE=... [more]
A0A5A7UBA42.1e-0757.14Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7VE321.4e-0653.70Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A1S3BUF54.0e-0654.00uncharacterized protein LOC103493408 OS=Cucumis melo OX=3656 GN=LOC103493408 PE=... [more]
BLAST of Cmc11g0292301 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0292301.1Cmc11g0292301.1mRNA