Cmc11g0291451 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0291451
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr11: 6780073 .. 6782005 (+)
RNA-Seq ExpressionCmc11g0291451
SyntenyCmc11g0291451
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTGTTAAAAGCTTTTTTTGGAGTATTATTGAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAACTTCCTAATTTTGAAAATATTATTGAAACATTTGTTACCAATTTCTATAATTCAACCCTGATGAAACTTATAATACAACAAAATCAGCTCTCAGTATGGATCCTTGGATGTATTTTAGCTTTCAGAGGCTTCTTCATGGCAACGGTGAGCTCTACCTTCTCCGACATATCAACTTCGTCTCCATCAACGACCTTCCATTCGAACCGCCATACCAAATTAGCAACAAAATACTCCAAATGAAGAATGGCCAAACCAAATCCAGGACATATCCTCCTCCCTGCTCCAAACGGCATCATCTTTATCTCCTTGCTCCCTGTTATATCAAACTCTGCTACTTGTTCTTCTTTTTCTTTCCCGCCCTTCACGAACCTCTCTGGATTAAACGCCGTCGGATCTTCCCACACTTTCGGATCCCGACCTATTTCCGCCACCATGAAATTTACGGTCACATTCTTTGGTATCACATAATTTCCCAACTCTGCATCTTCTTTCACTGCGTGTGGTAGCACGAAATGCGCTGGTGGGTGTCTTCTTAATCCTTCCAAAACCACAGCTTTCAAATATGGAAGTTTCCCCAAAACCTCTTCCTTCACTTCCTCCCTTGATCCATTTCCCATTACTCCTTTCATCTCTACAAAAAGCTTGTTTTGGATTTCTGGGTGTTTCACTAAATTCGCCATTATCCACTGCAAGGCTGTGGACGTTGTATCCGTGCCGGCGGTGAGGAATTCGGAGCATAAAGTAACTAATTCGTCATCATTAAGCTTTCTCTTCTCGTCAGGCAGCTCCAATTCAAGCAACGTATCAACATATGACACCACTATTTCTTCTTCTTCATTTTGGGCTTTGTTTTCTCTGTTTCCATTGGCCTTCCTTCGGGCTTCGATCAAACGAGTTAGGACCTTCTCTTGGTTCTTTCTTAGTTGGAAAAACGCCTCCCAGCGTTTTCGAAACAAAATCTTTGTGAATTTAGGCCAGAAATTGAGAATGTTAAAACGCTGAAAACTCAATATCATTGCTCGCTCCACGTTCTCGACTTCGCGAATCTGGGATTCATCAAGCTTATCCCCGAAACACATCAACACCAACAAACAAAACATGGCATACTGAAAATTCTCAATGACTGAGACGGGGTTTCCAGATTCAGACTGAGACTGAAGACGATTGAGAAGAATATCCAAAACCCACTTGCGAGCTTCACTGTAGGACCTGACACGAGAAGGATGGAGAATTTGAGAAGTGAGATTGCGGCGGAGGAGGCGCCAAAGCGGGCCGTAAGAAGCAGAGCTAATGTTGTGTTGGTTGGAAGTGATGACTTTACCAACGGATAGCGCCGGTGGACGGTCAGCAAAGAGAGCACCATTTTGGACGAGGATTTTGTGGGCAATTGAACGGTCGGCGATGAAGACAGTAGGTCTGGAGCCGATGCGGAGGGTGAGAACAGGACCATATTTAGCGACGAAACTCCGGAGAAGAGACTCGATTTGGAGGGAGGATCTGCGGAGCCATAGGAAATTGGTGAGGATGGGGATTGAAGGAGGGCCTGGTGGAAGCTTTGTGGAGGTTTGGAAATGGGTAAAAATGGAGGTGAGAAGAGAGCAGATGGAGAGGGAGATTAAGAAGATGAACCATATCTCCATTTTTGTGGTGTGGTTAATTTTGTTGAATCCAAACAGAAACGGCACACTGTTATATAACACACAAAAGCTAAAGAAGTCTGTTTTTCAACAATACTACAATGGTTGGAGTTGAAGATATTTTTTAGGAAGGTTTTTTTGGCGTGAATAGAAGTCACTTTCAAATATTGTTTTGAACTCAATTTCTAAAAATCTCCTTGGATTTTATCATCTATTTCAAAAGTATATATATT

mRNA sequence

GTTTGTTAAAAGCTTTTTTTGGAGTATTATTGAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAACTTCCTAATTTTGAAAATATTATTGAAACATTTGTTACCAATTTCTATAATTCAACCCTGATGAAACTTATAATACAACAAAATCAGCTCTCAGTATGGATCCTTGGATGTATTTTAGCTTTCAGAGGCTTCTTCATGGCAACGGTGAGCTCTACCTTCTCCGACATATCAACTTCGTCTCCATCAACGACCTTCCATTCGAACCGCCATACCAAATTAGCAACAAAATACTCCAAATGAAGAATGGCCAAACCAAATCCAGGACATATCCTCCTCCCTGCTCCAAACGGCATCATCTTTATCTCCTTGCTCCCTGTTATATCAAACTCTGCTACTTGTTCTTCTTTTTCTTTCCCGCCCTTCACGAACCTCTCTGGATTAAACGCCGTCGGATCTTCCCACACTTTCGGATCCCGACCTATTTCCGCCACCATGAAATTTACGGTCACATTCTTTGGTATCACATAATTTCCCAACTCTGCATCTTCTTTCACTGCGTGTGGTAGCACGAAATGCGCTGGTGGGTGTCTTCTTAATCCTTCCAAAACCACAGCTTTCAAATATGGAAGTTTCCCCAAAACCTCTTCCTTCACTTCCTCCCTTGATCCATTTCCCATTACTCCTTTCATCTCTACAAAAAGCTTGTTTTGGATTTCTGGGTGTTTCACTAAATTCGCCATTATCCACTGCAAGGCTGTGGACGTTGTATCCGTGCCGGCGGTGAGGAATTCGGAGCATAAAGTAACTAATTCGTCATCATTAAGCTTTCTCTTCTCGTCAGGCAGCTCCAATTCAAGCAACGTATCAACATATGACACCACTATTTCTTCTTCTTCATTTTGGGCTTTGTTTTCTCTGTTTCCATTGGCCTTCCTTCGGGCTTCGATCAAACGAGTTAGGACCTTCTCTTGGTTCTTTCTTAGTTGGAAAAACGCCTCCCAGCGTTTTCGAAACAAAATCTTTGTGAATTTAGGCCAGAAATTGAGAATGTTAAAACGCTGAAAACTCAATATCATTGCTCGCTCCACGTTCTCGACTTCGCGAATCTGGGATTCATCAAGCTTATCCCCGAAACACATCAACACCAACAAACAAAACATGGCATACTGAAAATTCTCAATGACTGAGACGGGGTTTCCAGATTCAGACTGAGACTGAAGACGATTGAGAAGAATATCCAAAACCCACTTGCGAGCTTCACTGTAGGACCTGACACGAGAAGGATGGAGAATTTGAGAAGTGAGATTGCGGCGGAGGAGGCGCCAAAGCGGGCCGTAAGAAGCAGAGCTAATGTTGTGTTGGTTGGAAGTGATGACTTTACCAACGGATAGCGCCGGTGGACGGTCAGCAAAGAGAGCACCATTTTGGACGAGGATTTTGTGGGCAATTGAACGGTCGGCGATGAAGACAGTAGGTCTGGAGCCGATGCGGAGGGTGAGAACAGGACCATATTTAGCGACGAAACTCCGGAGAAGAGACTCGATTTGGAGGGAGGATCTGCGGAGCCATAGGAAATTGGTGAGGATGGGGATTGAAGGAGGGCCTGGTGGAAGCTTTGTGGAGGTTTGGAAATGGGTAAAAATGGAGGTGAGAAGAGAGCAGATGGAGAGGGAGATTAAGAAGATGAACCATATCTCCATTTTTGTGGTGTGGTTAATTTTGTTGAATCCAAACAGAAACGGCACACTGTTATATAACACACAAAAGCTAAAGAAGTCTGTTTTTCAACAATACTACAATGGTTGGAGTTGAAGATATTTTTTAGGAAGGTTTTTTTGGCGTGAATAGAAGTCACTTTCAAATATTGTTTTGAACTCAATTTCTAAAAATCTCCTTGGATTTTATCATCTATTTCAAAAGTATATATATT

Coding sequence (CDS)

ATGTTGTGTTGGTTGGAAGTGATGACTTTACCAACGGATAGCGCCGGTGGACGGTCAGCAAAGAGAGCACCATTTTGGACGAGGATTTTGTGGGCAATTGAACGGTCGGCGATGAAGACAGTAGGTCTGGAGCCGATGCGGAGGGTGAGAACAGGACCATATTTAGCGACGAAACTCCGGAGAAGAGACTCGATTTGGAGGGAGGATCTGCGGAGCCATAGGAAATTGGTGAGGATGGGGATTGAAGGAGGGCCTGGTGGAAGCTTTGTGGAGGTTTGGAAATGGGTAAAAATGGAGGTGAGAAGAGAGCAGATGGAGAGGGAGATTAAGAAGATGAACCATATCTCCATTTTTGTGGTGTGGTTAATTTTGTTGAATCCAAACAGAAACGGCACACTGTTATATAACACACAAAAGCTAAAGAAGTCTGTTTTTCAACAATACTACAATGGTTGGAGTTGA

Protein sequence

MLCWLEVMTLPTDSAGGRSAKRAPFWTRILWAIERSAMKTVGLEPMRRVRTGPYLATKLRRRDSIWREDLRSHRKLVRMGIEGGPGGSFVEVWKWVKMEVRREQMEREIKKMNHISIFVVWLILLNPNRNGTLLYNTQKLKKSVFQQYYNGWS
Homology
[Close]
BLAST of Cmc11g0291451 vs. NCBI nr
Match: PKI37753.1 (hypothetical protein CRG98_041870 [Punica granatum])

HSP 1 Score: 92.0 bits (227), Expect = 4.6e-15
Identity = 48/88 (54.55%), Postives = 53/88 (60.23%), Query Frame = 0 

Query: 1  MLCWLEVMTLPTDSAGGRSAKRAPFWTRILWAIERSAMKTVGLEPMRRVRTGPYLATKLR 60
          MLCW ++  L    AGGRSAK APFWTR  WA ER   KTVG  PM RV  GP L  + R
Sbjct: 1  MLCWSQLKILLVSRAGGRSAKAAPFWTRAWWAREREETKTVGRGPMWRVTMGPCLEWRER 60

Query: 61 RRDSIWREDLRSHRKLVRMGIEGGPGGS 89
          R  S   +DLRSHR+    G   GPGGS
Sbjct: 61 RMGSSSVKDLRSHRRFPMRGKVRGPGGS 88

[Close]
BLAST of Cmc11g0291451 vs. ExPASy TrEMBL
Match: A0A2I0I1R2 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_041870 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.2e-15
Identity = 48/88 (54.55%), Postives = 53/88 (60.23%), Query Frame = 0 

Query: 1  MLCWLEVMTLPTDSAGGRSAKRAPFWTRILWAIERSAMKTVGLEPMRRVRTGPYLATKLR 60
          MLCW ++  L    AGGRSAK APFWTR  WA ER   KTVG  PM RV  GP L  + R
Sbjct: 1  MLCWSQLKILLVSRAGGRSAKAAPFWTRAWWAREREETKTVGRGPMWRVTMGPCLEWRER 60

Query: 61 RRDSIWREDLRSHRKLVRMGIEGGPGGS 89
          R  S   +DLRSHR+    G   GPGGS
Sbjct: 61 RMGSSSVKDLRSHRRFPMRGKVRGPGGS 88

[Close]
BLAST of Cmc11g0291451 vs. ExPASy TrEMBL
Match: A0A2N9HD58 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40168 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.2e-14
Identity = 48/81 (59.26%), Postives = 54/81 (66.67%), Query Frame = 0 

Query: 10  LPTDSAGGRSAKRAPFWTRILWAIERSAMKTVGLEPMRRVRTGPYLATKLRRRDSIWRED 69
           L  + AGGRSAK APFWTR LWA    AMK  GL+ MRRV  GPYLA  LRR  S   + 
Sbjct: 32  LADEGAGGRSAKMAPFWTRDLWARVWLAMKMKGLKLMRRVMMGPYLAWCLRRMGSTSEDL 91

Query: 70  LRSHRKLVRMGIEGGPGGSFV 91
            RS+RKL RMG+  GPGGS +
Sbjct: 92  RRSNRKLPRMGMVKGPGGSLL 112

[Close]
BLAST of Cmc11g0291451 vs. ExPASy TrEMBL
Match: A0A7C9CYM4 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 7.3e-06
Identity = 35/73 (47.95%), Postives = 40/73 (54.79%), Query Frame = 0 

Query: 17 GRSAKRAPFWTRILWAIERSAMKTVGLEPMRRVRTGPYLATKLRRRDSIWREDLRSHRKL 76
          GRSA RAPF T+  WA     MK    EP   +  GP L  +L    SI  +DLRSH   
Sbjct: 12 GRSANRAPFRTKAWWAKSWLDMKMTEREPTGTLTIGPCLEKRLLSAASISVDDLRSHLIP 71

Query: 77 VRMGIEGGPGGSF 90
          + MG  GGPGGSF
Sbjct: 72 LIMGTAGGPGGSF 84

The following BLAST results are available for this feature:
BLAST of Cmc11g0291451 vs. NCBI nr
Match NameE-valueIdentityDescription
PKI37753.14.6e-1554.55hypothetical protein CRG98_041870 [Punica granatum][more]
BLAST of Cmc11g0291451 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc11g0291451 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2I0I1R22.2e-1554.55Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_041870 PE=4 SV=1[more]
A0A2N9HD583.2e-1459.26Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40168 PE=4 SV=1[more]
A0A7C9CYM47.3e-0647.95Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1[more]
BLAST of Cmc11g0291451 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0291451.1Cmc11g0291451.1mRNA