Cmc11g0291111 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0291111
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific)
Location	CMiso1.1chr11: 6443325 .. 6457056 (-)
RNA-Seq Expression	Cmc11g0291111
Synteny	Cmc11g0291111

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATTTTTTAAAAATACATTATTAAAAAAAAAATTATCCATATGCATCCCCAAGTATTTTTCATAAATAAAAAAATAAAAAGGAACTCCCTTCGTTTCCCTCTTTCTTATCATTGTCCACATTCCCCCGGCCCCGCGTCATGTTCACAGCCGCCAGTGTTTCTGCTTCAACTCCAGCGATTCTCCCTAGACCCACGATACACTCCGCCGTCAGCTGTCATCAGTGCGACTCCGACCAACGACCCATGCCGCGACTACACTATTGACGACTGTTTGCTGCTCTTCTACAGTAGCTAAGCTGCTTTTCTACACCCTTGCAGACGGAGACCTACGTTGCACTATGATGCTATAAGGCCAAAAATCTTTACCCAACAATGAGGTGAGCATAAGGCCAAATATCGTTACCCAACAATGAGGTAAGCGTGAGGCCAAAAAACGTGGGTCTTCAAAAGTTAGGCCAAATATCATTTGTACCCTTCAAAAAGAACCCTTCAATTTGTCCCCAGTTCTTACTAATTAAATCCCATTACTTCATTTTGTCGCAGCTTACTTCATCACTTTCACCTCTCAAATTCTCCTCTCGGGTAATTCTTCTTTCTTTAGAGTTTGAGTTTCTTCTTTAGTATCAACATATTTCTCTCTTTCTTGCCTGGTTTAGGGTTGTGTTGTTGAATGTTTGCTGATGCTAGATCAATGGGGTAATCGTGGGGTGTGATGTACATGATCAGTTTCTTTTAGCTTTAATCGTCTCATTATCAACTATTTGGAAATCAAACATCATTAACCATAATTACTCTATTTGGTAATCCCACTAATTTCATGGTATTTTTAATTATTTTTTGTATCTTTGACAGCTTCATCTCTTCAAACACCAAATTTCTTTGTTAAAAATGGCGTTTTTCGTCATTTTAAAAAAATTTTCATGGCTATTGTCATTGCATTGGTTGCTCTAAAATCTAAATTTATCATATTGGGGTATGGGTTTAGGAGGAAAGCAAGGAACAAAGACTTGTAAATTGGAAATTTTCAATGGTTCTGGCACCCTTTTAAGTGTTTTTCGTCTCGGGAAGATATTGGGTATCAAATTATTAAGCACATGCAAGTGTTAGTTTGGGTTTTTCTTCATCATTTTCATGATTACCGTGTTAAATATAAACCCCCAAAAGAGTGGCGAAAGCTCTTACTGAGATGCTGGATTGCTTTTGTTTCTTATATTTTTATTCATGAGTCATTTTCAAACTACAGGTCATATCCATGTCTTAATCTTTATGATACTTCCATTTGTGGAATAAAGTAAATCTGAAATTGAAAACTGTTGTTAGACTGTTAAATTTTAAATAATCTGTTTTGTTTCTTTTTTGGATTTTTTCCTTTAAAATTAGTTATTATTATTGTTATTATTTGAATTTTTTCTTCAAGAAATAATTTTTCAAAATCTGATGGTCTAGGTTTCTTTGTCTTTGTATTTGTCTTTTTGCAGACCGATGAGTATCAAGGTTGAACTTCAGAAGGTAAAGTGTTTCACTGCGAGCCTCTAGGAATTGCTTGGTTTATTTTCTTTATCTTTATTTGTCTTTATTATTTAGTTTTACATTCTGTGAAAGCATAAGCAAAATGCTTATTAGGATCCCAGGGAAATTTTTGGGGCCTAAAACAATGTTTCTAAGATAGCAATAACCTCATTCTAATTTTTGTAAACTTCAACTCTACTATTTTCAGAATCATTTGACTTGTATTGTGACAACTTGATTTTTATGTTGTGGTTTTGGTGTACATGAATCAGATGCTTATTTATTTTTTTTCAAGGCTTACCCAGATTGGAATTCTTGGGCTTCAGATGATATGGCATTTCCTACACTTCATTGTTAGCGCATCTTACTTTGTGGTTGGTATTGCCACAACACTTGAAAGCTATTTGATATCTTGGGGATTCCCATGCAAGTACAAGCATCTTAATATAGACAGGGTTCAATATCTTGCCATTGTGGTCGAAAGTGATGAAGCTTATAATACATTAAAAATTATTGAACTTCTGGAATGGTTGATATCGTTGGGCATTAGAAGCGTTTGCTTGTATGATGCTGAAGGTAATGATTTTAGGTCCATCCAGAAATTCTGAGCTCTCTTTTATTTGTTGCCAAATGCTTATGATTATCTTTTCAAATTTGTTGAATCATATGCTTATTCCTGAATTTTATTTTCAAGGGGTGCTTAAACAGTCCAAGGAAATCATTTTGAAGAAAGTAAAGAATGCGTCTGAATTTCAGGTACATGCTACTGTAAGAAAGATAGACCCAAACCTATGGGTTCAGTAAGTGACAAAGTTTTCTGCATTCAACCAAGTGATCCCTAATACTTTGAGGCCCTCTTTCTGAAATATGAATGTAGATTTGTATATGGTATAATTGTGTTTTTATCAGTCCTTTATCTTTGTATTTCTTTCAATGTTCTTTCCTTTTATTAGTTACCTTAGTGGAAATTGTGGAAATTCCTCTTGTATTATAATTACACAACTTGGGTCTATTATTATTTTTTTAAATCATGGGAGAAATTATGTAACAGGGAGTTTCTAAGTCTTTGTTGTTGTTATTAGTGATATATAATTAAATTTAACTTTACCCACTAACTTAAACTTTTGGGTTAATCAGTGATTTAAGATGGTACTAGAGCATGGTACTAGAGCAAGTGGTCCAAGGAGGTCTTGTTTTCGAGCCCTTGCAATGTTAATTTTCTCCTCAATTAAAATCGATTTCTACTTGTTAGGCCTTTCAAATATTTCAAGCCACCAAGTGGAGGGGAGTGTAGTGATATATAATTTAATTTACCTTTACCCACTAGCTTAAGCTTTTGGGTCAATCGGTGATTTAAGTTGCAAGGTTAATTGTAATGAGATTACCTAGGGTCCTTGATGGAATAGCATGCTTTTGATTCCATGTGTATTGCTTCTCTTCAGTGAAATTAGAGAGAGCTTTTTGAAATTGTATTTGTTTCTTTGAAGTTGCATATTGATCTTTGCATGAGATCATTTATTTCTTCAGTAGTACGAGAATAACTGCTGCCTTTTGTTTTCTCTTCCAAGTTTACCACAAAAAATGACAGTACTCTAACTTAGGAGGTGAATGTCAATAATAAGATGTGCATTATTCTTCTAATTTAGTCATTGCCTTCAGGGGATTGATGAACCTCTCCAACTAAACAAAAAAGGCATTACTCTGGAGTTCATATCAGCCTCTGATGGAAAGGAAGCCATTGCCAGAGCAGCTAATTTTCTTCTTCAAAATAAATGGAGAAAAACCAACATGAGTGGAGACCAGAAGCAATGCTTATCTGAATCTCAAATGACCGAGGCTTTAAAAGCAGTTGGTCTGTATTCTTGCTTGTACTTGATAAGGTTCAGAGAAATATTTTACTTGAATGTTAATTAACCTTACGTATATTGGACCCCTAATTAGGTTGTGGAGGGCTTGATCCTGACCTCATTTTAGTATATGGGCCTACAAGATGTCACTTTGGGTTTCCTGCCTGGAGGATCCGCTACACAGAGATTCTGTGAGTCTTTTTTGTTTATTTATATATATTTTTCTTCATAAGTAATGACACTTTTGGTGAGCTGATGAGAAGTTCAAAAAGGAAACCGAAATCCTCAAATGAAGTAGCTAAAAAATGACTACATGAAGAAGTTTAGTTACACTAGCTGGATAATTAGATAGAGGTTCTATCAAAGAACAGCAACTCGATGTTCTAAACTTTATGAACGCCCCATGCATCCTCCATGCCCTTGCTTTTAGAGAGAAAAATCTTCTCTCTATTAACAGATTCTAAAGAAGGGCAGGGACTAATACATCCACAGCCTCCTTGTGCTTTTCTTTAGGGAGTGTCCACAAAGGTGTTGATTGTTATGCCATCATGGTTCATAAAATTTCAGTAAAGACTAACCAAATGCGTCAAAGGCCAAGTGGATTTAAGAAATGCCTTTCAATATTCTCAACTTTGAACTCATGCAGCAACAGAGTACCAGGTTGGAAGTCCCTCAGGGAAGTCTTAATTTCACCTGCTTTCCTTCTAGTCCTTAGCTTGCATGTCGACGTGCACATCTACGAGATTTATCGTAATTCATCTATATCTTAACTTCTTAGTTCTCTCAGACTTCTTTAGCAGGATCTTTTATCTTCTTCTGAAACTCTTTCTCATTCTATCTCATTGTTAGCATCCACGTCTTCTTCTGTCTGTTCATTGCCACAAGCTATTAATGTATTTGATGAAAATTGACATTAGTCTTCCACCTTGGTTGCTTGACACTTGACTAGGGAAGCCTCGTAAAGGTGATTGTTCTGCATAAGACCCCTACCCCTACCCCTACACGTGCTAACTCTTTATACAAAACCCGGAGCTGCTAGAAGTAGAATACGTCCCATCAGTTGTATGGTCATTCTGTGCTTCGATTCCTTTCATTCCACCAGTTATAGAAAAAATACTTCCTTCCAATAGGGAAATGGTGTTTGTTAATGGTTATATTGAACATTTTGAATGGTTGTATACCTATACTTATCATAGAAAAACTAATATTTTCCGTTTAAGGAAGCTTATTTAATGGTATGTGACTGTGTGGAACCTTTACTTCTCATTTATGAAATAAATCAATTTGTTTAACTGATGAACCAAACACAAAATGTAAGTTACCTAACAAGTTTTCCTACACATTTTTACTTATTTCTTTCTTTCCAAACTTTGCACATCCTGCTTTAATGCACTTTCACTTTCTTCTGCTGCATAGTTGTATCCTTTCAATGGCAGATTTCCTGAAAATCTTCATATTATTGGCATTAGATTATTGTTTACAATTCCATACAATTTTGTAGTAATTTTTGGGGTTGAAGAGAATTGTGTAAAGATACTACAGATGTATCTTATTTTATTGAATTACCTCAACGAATTACAAGATAGAAAATAGGAAATTCCTCACGGAAATTTGGTCACAGAAGATCAAAATAATTCAAACCTAACTTCTAATTACTAAGACGCACTCCAATCAAGGACACAACTAAGAATTAAGGAACCAACGACAATAAGGAAATTGTCCAAAACAAATAATAAAAACCTGGAACCCTCTGCTTCTCCCGTTGCACGGAACGAAGGTAACCCCTATTTTTTCTGGAATTGTTCCCCCTTTTTCCGTCGTCTTTCCTCCCTTTTATTTTCCCATTAATGGGAGGGATCTACTCCCTTTAATTCTGCGTTGCTAACAAATTAATGGGAGAGATCTCCTTCTATATTCTCGCGTGGGTGGTCAATATTAGTGTTAGAATTATTAGAATTAGTGGACTTAGTCCATTGGGAAGATTTACCCTAAATATTCTTTCCTTTTTTATCTCTTTGTACTTTTCTATTTATTCCTTCTTGTACCTATTATATGAATATCAAACAATAATAAAACTAAAAACATCGTGGTTTTTCTCCTAGTTCTCGAGTTTCCACGTAAGCCGGTTTTGTGTTTATAGCTTTCAATATGGTATCAGAGCATGTGGTTCAATGAGGTCTGTTCAAGCCTCTGCAGTGTCATTTCCTCCCAAATTAAAATTAATTTCCACTTGTTAGGCTTTTCAAATATTTCAATCCACAAGTGAGGTAAAATTGATTTTCACTTGTTGGGCCTTTCAAGTATTTCAAGCCTTCAACCACCAGCTTAAGCTTTTGGGTGAATTGACAGTTTAATAATGTTGGTGATATATAATTTAATTTGCCTTCAACCACTAGCTTAAGCTTTTGGTGAATTGGTAGTTTAATATGGTATCAGAGCGAAGCAACAACAAAACTCTAGAAAAATTTTTAGGAATCACCCAGACCAAAACAGTGCCGCCACTAACGCAGTCGTCGTCGTGGACACCACCATGGAAAAAGTATTCCAACGGATTCAGACACTGTCGATCTATCCAATGGGCTAACCCTCACCGTCGTTCGCGCAACCTTCTGGCCAGAAACCATTTCACGCACCGCCTCTGTCGGGTGCGTGGGCCCATGCGCTGTCGTCCGTTAATCTCATCGCCCATCCCATCCGCTTCTACGCGTTGTCGCCTGTCTAACCGTCTCACCCTTTCGGTCATCTACCGCTGCACGCGCCGCCCATCGCCGTCGGACAACAACCTTCAAAATTGTCAAATCTATACAGTAGTGCAACTCTTTCCGTCGACCCTTTACATCAACCTTTCTTCTATAGGAACGAGGCTGACCAACACCATAATAGATCGGAGATTGAAGCGAGCGAGTCATCGGCACCCTCCGGTTATGGACAACCATATGTTTGTGGTCTCGGGATTAATCAAACCTACAGGAGAGCTGTTTTTGAAGTTAATGCATCCTTGGCACAAACCGATCTACCCATGTATTCCAAGAACCCGATAATTTTGCTTCCTAACGTGCCTTCAAATTATATAACTAACTCTGTTGCCTTTAGTGCTCGATCCTTGACCCATGATAATGGGAAACCAATTCTCGTTTGTGAGCATTGCAAGAAACAACGGCATACCAAGGATCAGTGTTGGAAATTCCGCAGTTGGCCCCCAAGAGGTAACAAACGCTCCTTCAACGAGTAATATAACTCAGGGCATACCAATGTTAGGGAGACTGCCAGCACCTCTCAGCCAATTGGCCCTGCTGCTATCCAGACCAGCTTTCCTACTCTAAGCGCCATTGCTCAATCAGGTATGTCTCAGTCCCTTGGCCTTATTAGTGTTGATGGGACGAATCCCTGGATTTTGGACTCGGGGGCCACATATCACTTGACAGGTTTCTCGGGGCACTTTCTCTCTTATACCCCTGTATCGGTAATGAGAAAATCCGGATAGCCGATGGCTCTTTAGCCCCAATTGCAGGGAAAGGACAAATAGTCCTCTTTGACGGTTTCTCCCTCCAGAATGTTTTGCATGTGCCTAAGCTTTCTTACAATTTGTTATCTATCAGTAAGATCACCTGTGAGCTGCACTGTAAAGCTACTTTCTTACCTGAGTGTTTGCTTTCAGGACTTGAATTCGGGGAAGACGACTGGCACTGTCCGACATAGCAGGGTACTTTACATCCTTGATGATGATACCTCCAGTAGTAGTATCTCTACGACTAGTTTAATGTCTTTCTATTTTAGTACCTCTGAACATGACTTTATGTTGTGCCATTTTCGGTTAGGTCACCCGAACTTTACGTATATGAAATATTTGTTTTCCCATCTCTTTCTTAAAATAGATGTCTCCTCGTTATCTTGTGATGTGTGCATTTGGGAAAAACAACATTGTGTTTCTTTTCCCTCACAACCATATAAACTCACCCAATTGTTTACCCTTATCCATAGTGACGTTTGGGGTCCCTCCAAGGTCACCACCTCATCTAGGAAAATGTGGTTTGTAACTTTCATTGATGATCATACCCGTCCCAACTTGAGGGGGAGTGTTAAGAATTATTAGAATTAGTGGGCTTAGCCCATTGAGAAGATTTACCCCAAATATTCTTTTCTTTTTTATTTCTTTGTACTTTTCTATTTATTCCCTTTTGTACCTATTGTAGGAATATCAGAAAATAATAAAACTAAAAACATCGTGGTTTTTCTCTCGGTTCTCAGGTTTCCACGTAAGCCAGTTTTGTGTTTATTGCTTTCAGTAATTACCTTTTTTAATTCTTCTACTATATTTAAATAATATTGGAGGCCTACCATCACTCTCCTCCGCCAAATCCACCTTGTCCTCAAGGTGGAATCTAGGGAACTACTATTTAAACTCAGTGCAGTCTTCCTAAGTAGCTTCATGTGGAGGCAGACTCTTCCAGCTGACGAATACCTCCCAATTTTTTTGTGGCTGGATTTCTTCGATATCCCAAGATTTCCTTTGGTCGTGTGAGCCACTCATGATTCACATTTATAAAAGGACCCAACTGTTGTGCTTGATGATGGTTTTCGAGTTCCTTTTTCAATCGAGACACGTGGAAAATAGGGTGTATAATTGCCGAACTAGGAAGCTCCAATTTATAAGCCACTGCTCCAATCCTCTCCACGATCTTGTATGGCCCAAAATACTTGGGTGACAGCTTCTCGTTCCTTCTCCTTCTTAATGAAAGTTGCCTATATGACCTGATTTTAAGGAACACTAATTCTCCAATTTGAAACTCCACATCCTTTCTTTTCAAATCAGCATATTTTTTCATCCTCTCCTGGGCAATTCGTAGGTGTTCCTTCAAAGCTCCCAAAGCAATATCTCTATCCTTCGGCTGTTGGTCGAGCGTGGAATCTGAGGTTTCCATGTCTCCATATTGAATCAAAGGTGGTGGCCTCCTTTCGTATACAACTTGAAATGGAGTAACACTAATTGAGTTGTGGTACATTGTATTGTACCAGTATTCTACCCAAATGCAACCAGTTACTCCTTTCCTTTGGCTTCTCCCCACAAAAACATCGCAAATAGGCCTATACACTCTTATTCACTACTTCGGTTTGGCCATCAAATTGTGGATGGTATGCTGAGCTCTTGTGCAGCTTAGTACCTGCCAATTTAAACATCTCATTCCAGAAATGGCTGAGGAAAATCTTATCCGGATCAGAAACGATGGATCTAGGGTAGCCGTGCCATCTGACCACCTCTTTTACAAAAACTTTTGCTGCTGACTTGGCTGTATAAGGATGCTTTAGGGCTATAAAATGTGCATACTTACTCATTCGATCCACCGCTGCAAAAATCACTTCCCATCTTGATGATTTCGGCAAACCCTCTATGAAGTCCATTGAAATGTCCTACCAAATTGCATTTGGAATCTCAAGCGGCATTAACAGCCCTGCTGGGGATAATGCTAACGTCTTGTTCCTCTGACAGATTAAGCATTCATTAAATATTTCTTGATGTCTTTCTTCATATCCTCCCAATATAATTCCCCTGTTGTCCTTTTATAAGAGTAGGAAACCTAAGTGTCCTCCGAATACTGAATCATGTGTGCATGATTATCGATAATAAAGAAGAAGTCTTTAAAAGAACTAACCTCTCCTTGAATTGCAATGCTGCTGCAAGGAGAAATTTGGAACTTCCTCCTTCTGCTCCTCTATTTTTCTTCTAATTACCCTTAAGACTTGGTCTTTTTCTACCTCCTCCTGAATTATTGCCAAATCCAACAAGGTTGGGCTGAAAGTTGGTTTAGATGCATTGTGGGAGGGACTCTTGACAGAGCGTCAACAACCTTATTCTCTAAACTTGGCTTGTAAACAACCTCAAACGAATATCCCAGTAATTTAGCAATCCATTTTTTATATTGGGGCTGAATTACTCACTGCTCCAGAAGAAACTTTAATGATCTTTGGTCTGTCTTTACAGTAAATCTCTTCCCCAATAAATACGGTCTCCATCTTTGTACTGCAAACACCACTGCTATTAATTCTCTCTCATAGACCGGCCTTGCTATGCTCCTCGCACATAAGGTTTTGCTGAAATACACTACTGGTTTTTTGGCCTAAATTACAATAGCTCCAACACCAAATCCTGAGGCTTCCGTCTCTATTTCGAATGGTAGGTTGAAATCAGGCCAAAACCGGCACGATCATCATAGCCATCTTCAGTTTTTCGAATGCCTCATTTGCCTCTTCAGTCCACTTATAAGCTCTCGCTTTCAATAACCACGTTAGCGTCCCAGCAATACTGCCATAGTTATTGACAAATCTCCTATAGCAACCTGTCAACCCCAAGAATCATTGAATCTCTCGGACATTAGTAGGAATTGGCCATTCCTTAATGGCTCTTATTTTCTTTTGGTCAACTTCAATTCCCTTCTCAGATATGAAATGCCCCAATTATCCTATGTGAGCCTTAACAAAGCTGCATTTACCAAGGTTAGCATAAAGTGCATTTTTCTGGTATCTCTAACACCACTTTTAAATGTTGCACATGCTCTTCTAAGCCCCTGCTGTATACTAGAATATCATCAAAGAAAACTAGCACAAAACGCCGCATATAGGGTTTGAATATGTGGTTCATCAATGCTTGGAAGGTAGCCGGAACATTGGTTAGCCCGAATGGCATCACCAAGAATTCATAGTGAACTTTGTGAGTGCGAAAAGCAGTTCTCTATATTTCTCGGATGCATTCTTATTTGATGATAATCAGCCTTCAAATCTATTTTAGAAAACATGTTGGTCCCATTTAGTTCATCAAAAAGTTCCTCGATCACCGGAATTGGGAATTTATCTGGAATAGTTACATTGTTCAATGCTCTATAATCCACGTAGAATCGCCAACTCTCATCCTTCTTCGTTACTAACAATACAGGGCTAGAATACGGGCTGGTACTGGGCCTTATTATGCTCGACTTCAACATCTCATCAACTAACTTCTCCATTTCTTCCTTTTGGTGATGCGCATATTGATACGACCTCACATTGATCGGATATGTGCCTCTTTTAAGATAAATGTGATGCTCAATGTCCCTTGTTGGAGGTAATTTTTCGGGTCAGTCAAACGCATCATCGAATCGGTTCAGCAAAGGGGAAATAGTATTTTCAATGATTGGTACTACTTCCTCATCATAAATCGCCTCCACAGACAACCCTCCTTTTAAGGCTCGACACTCTACTAGAAAGCCTTGATCCTCCGCTCCCTACGTTTTCATCATGTTTTTCAAACTAACTCTCTTCTTGGTTAAGGTGGGATCTCCTTTAATTACTACCTTCCTTCCTTCGTGCTGAAAAGACATCACCAAGTTTCTCCAATCTATTTCAGTGACTCCTAAAGAGTGCAGCCACTGCATACCAAGGACAACATCTACCCCACCTAGTTCCAAGGGTAAGAAGCTATCTATGATCTTCCATTCACTCACCATTACTTCAAGTCTACCACAAACACCCACCATTACTTCAAGTCTACCACAAATGCCTTTTCCCTTTACTGGTACTCGATCCCAAAATCACTCCATAGTCGACCGTGTCTTTCGTTGGTATGTTTAATGCAATGTCCAGTTTTTCAACAATGAAATTGTGGGTAGCCCTACAATCAATAAGAACCACTACATCTTTTCTCTTCCCTTTCACCTTCATCGTTCCCGGGTTGGTCAATCTTACAACCGAATTGATGGATAACTCAATATTTATATTCTCCACATTCTTGACTTCAATGGCCTTAATTTCAGTTTCAGCATCGTAAAATTTTTCTACAAGAATTTCAAGTTCCTCTCCACTCTCCCTTACCACCAGCATTTTGAGCTCCTTTTGTCTCTTAGCCTTACATCTATGGCCGGCATGGTATTTCTCGTCACACCTAAAACATAATCCCTTTCCCTTCGTGATTGAAATTCAGCGTCGAACGATCTTTTTGTCGGACCTTCTCGCCGGTTCTCCCCTGCAGTAACTCCTCTCAATGTTATAGTTCTCATCGGCCAACTTCCCACATTTTATTTTGTGTCTCGTTAAATGTCATCGCAGTATTCTTTACATTAGATAAATTGAATTTTGGTTTTCGTCCATATGCACTACTCAGCCCACACTCTTCTCACCATCTCTCTATTCTCAATCTTCAATGCAAGCTTCATCATCTGAGCGAACCCAACAGTGTCCAGAGTATCCACTTCCGTCTTCAACCATGGGCTAAACCCATTCATAAACGTCTCCTCTAGCACCATGGTTTGAAGAAATGCTAACGGAGCCAACAACTTATCAAATATGTTACGATACTCTTCAACTGTTGTTTCTTGCTTGATTGAGAAGAATTTGCCAACCAATGTCCCATCTTGAATGGTTCGGAAGCGTACTAATATACGTTGCTTCAAGTCATCCCAATTTTTGAAAGCTTCCAACTCATCATTTGAACGGTACCAATCCAATGCAGAGCCATCAAAACTGATTACTACTACTGTTAATTTTTCATGGATTTTGAAGAATCGGTCTGCTCGGAACAACCAAGGATCGGGATTAGTTCCATTAAATACTGGCATCTCCACTTTCTTGAACTTACTTCGATCCATAGGGTTGATGTCTTCGTGTCTTGTATTCGTCTTTGAGTCATCAACAACTTCAGATAATATTGTATCGCCACTCTTCGTATGACTAGTAGAGCCCTCCGTCGTCTTCCCTGCTGATGAATTATCACGGATTATCCCTTCAATATACTTCAGAATCACTTGTTGTTGCTTATTGATTTGAGCATTCATCTCCTTAATGCTTTTCGTCAATAGTGGCAAGTTCTCATCAATGATCGGCAACCTCTGCAGCTCTTGCTCCACCAAGTCCATCCTCTCCTCCATCTTCCTTGCCATTGTCGTTTATGATCCCAGGTTTTAGGCTCAGATACCAATTTGTAAAGATACTACAGATGTATCTTATTTTATTGAATTACCTCAACGAATTACAATATAGAAAACAGGAAATTCCTCACGGAAATTTGGTCACAGAAGATCAAAATAATTCAAACCTAACTTCTAATTACTAAGACGCACTCCAATCAAGGACACAACTAAGAACCTCTGCTTCTCCCATTGCACGGAACGAAGGTAACCCCTATTTTTTTGGGATCTTTTTCCCCCCTTTTCCGTTGTCTTTCCTCCCTTTTATTCTCCAATTAATGGGAGAGATCTACTCCCTTTAATTCTGCGTTGCTAACAAATTAATGGGAGAGATCTTCTCCTATATTCTCTCCTATATTCTCGCGTGGGTGATCAATGTTACCTTTTTTAATTCTTCTACTATATTTAAATAATATTGGGGGCCTAGCAAATTGTACGAGCTTCGATGAGATTTACTTGTGTTATCTTGCAGACACATGGGACCGTTGAAGTCCATGTTATATGGTTCGTTGCTAAAAGCCATTTACAAGTTTACCATGGTGCAACAGAACTATGGTGAGTTACTTGCTATTTCCTTAATAAGTTCTAATAAAGTTTGTATATCTCATCTTTATAATGTTGTTGCTATATGTTATGATTCTAAATGGTGAAATTTGATTTTACAACTGAATTCCATTTTGCTTCTTTTTTTTCTACGGAGGTTTCTTTTGTTTTGTCGAGTGTTTTCAATATTCAAAGACCTCAAAATTTGTTGTTTCAGAAATTTGAATCATAATTAAAATGTTTACTATTTCTTCATAAATTTGACTTATAATTAAAATGTTTATGCTTAGAAAAGATGAAAAGCATGATTGTGATGGAACTATCCTAGTTTCCAAAAACCAAATAGTTATCAAACATTGGGTTTTAACAATCGGATCTTGTATAATCTTTTTGAAAGCCTTCCAGCTAGCCTTATTTTACCACATATCCATTTGATATCCATTTCAATATTCGTTTTCTATTTTCATAACATAAGCTTATTCACATAATTATTTTTAGTTCAAACTCAACAACAACAATTTTGTTTTACTTCAACATAAAAAAGCACAATATTTTAATTAGCCAAGTTATTTTTTTTAAGTTGTAACGTATTGTTTTCTACATTCAGCAGAAGTTATAAGTTACATTTCAATTTTGAAGGTGGTGACTAATCTTAATTATGTGATGGTTTCAATAGGTAAATGAGCTGAAGCATCGTGTAGTGATGGAAGGCCAATGAAATAAGGACAAGATTTTTCTCATTTGAACAGTCATAGATTTAGTTTTATGAACCGAATCCAAGGGTTTTGTCGTTTCATTACTCTTTTAATTACTGTAAAGAATTCATAAGCAATATAGGCAATTATATAAAATTCACCAACCCTACGCAATAAAGTTATTATTATTATTATTATCATGAC

mRNA sequence

TTATTTTTTAAAAATACATTATTAAAAAAAAAATTATCCATATGCATCCCCAAGTATTTTTCATAAATAAAAAAATAAAAAGGAACTCCCTTCGTTTCCCTCTTTCTTATCATTGTCCACATTCCCCCGGCCCCGCGTCATGTTCACAGCCGCCAGTGTTTCTGCTTCAACTCCAGCGATTCTCCCTAGACCCACGATACACTCCGCCGTCAGCTGTCATCAGTGCGACTCCGACCAACGACCCATGCCGCGACTACACTATTGACGACTGTTTGCTGCTCTTCTACAGTAGCTAAGCTGCTTTTCTACACCCTTGCAGACGGAGACCTACGTTGCACTATGATGCTATAAGGCCAAAAATCTTTACCCAACAATGAGCTTACTTCATCACTTTCACCTCTCAAATTCTCCTCTCGGACCGATGAGTATCAAGGTTGAACTTCAGAAGATTGGAATTCTTGGGCTTCAGATGATATGGCATTTCCTACACTTCATTGTTAGCGCATCTTACTTTGTGGTTGGTATTGCCACAACACTTGAAAGCTATTTGATATCTTGGGGATTCCCATGCAAGTACAAGCATCTTAATATAGACAGGGTTCAATATCTTGCCATTGTGGTCGAAAGTGATGAAGCTTATAATACATTAAAAATTATTGAACTTCTGGAATGGTTGATATCGTTGGGCATTAGAAGCGTTTGCTTGTATGATGCTGAAGGGGTGCTTAAACAGTCCAAGGAAATCATTTTGAAGAAAGTAAAGAATGCGTCTGAATTTCAGGGGATTGATGAACCTCTCCAACTAAACAAAAAAGGCATTACTCTGGAGTTCATATCAGCCTCTGATGGAAAGGAAGCCATTGCCAGAGCAGCTAATTTTCTTCTTCAAAATAAATGGAGAAAAACCAACATGAGTGGAGACCAGAAGCAATGCTTATCTGAATCTCAAATGACCGAGGCTTTAAAAGCAGTTGGTTGTGGAGGGCTTGATCCTGACCTCATTTTAGTATATGGGCCTACAAGATGTCACTTTGGGTTTCCTGCCTGGAGGATCCGCTACACAGAGATTCTACACATGGGACCGTTGAAGTCCATGTTATATGGTTCGTTGCTAAAAGCCATTTACAAGTTTACCATGGTGCAACAGAACTATGGTAAATGAGCTGAAGCATCGTGTAGTGATGGAAGGCCAATGAAATAAGGACAAGATTTTTCTCATTTGAACAGTCATAGATTTAGTTTTATGAACCGAATCCAAGGGTTTTGTCGTTTCATTACTCTTTTAATTACTGTAAAGAATTCATAAGCAATATAGGCAATTATATAAAATTCACCAACCCTACGCAATAAAGTTATTATTATTATTATTATCATGAC

Coding sequence (CDS)

ATGAGCTTACTTCATCACTTTCACCTCTCAAATTCTCCTCTCGGACCGATGAGTATCAAGGTTGAACTTCAGAAGATTGGAATTCTTGGGCTTCAGATGATATGGCATTTCCTACACTTCATTGTTAGCGCATCTTACTTTGTGGTTGGTATTGCCACAACACTTGAAAGCTATTTGATATCTTGGGGATTCCCATGCAAGTACAAGCATCTTAATATAGACAGGGTTCAATATCTTGCCATTGTGGTCGAAAGTGATGAAGCTTATAATACATTAAAAATTATTGAACTTCTGGAATGGTTGATATCGTTGGGCATTAGAAGCGTTTGCTTGTATGATGCTGAAGGGGTGCTTAAACAGTCCAAGGAAATCATTTTGAAGAAAGTAAAGAATGCGTCTGAATTTCAGGGGATTGATGAACCTCTCCAACTAAACAAAAAAGGCATTACTCTGGAGTTCATATCAGCCTCTGATGGAAAGGAAGCCATTGCCAGAGCAGCTAATTTTCTTCTTCAAAATAAATGGAGAAAAACCAACATGAGTGGAGACCAGAAGCAATGCTTATCTGAATCTCAAATGACCGAGGCTTTAAAAGCAGTTGGTTGTGGAGGGCTTGATCCTGACCTCATTTTAGTATATGGGCCTACAAGATGTCACTTTGGGTTTCCTGCCTGGAGGATCCGCTACACAGAGATTCTACACATGGGACCGTTGAAGTCCATGTTATATGGTTCGTTGCTAAAAGCCATTTACAAGTTTACCATGGTGCAACAGAACTATGGTAAATGA

Protein sequence

MSLLHHFHLSNSPLGPMSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLISWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGDQKQCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSMLYGSLLKAIYKFTMVQQNYGK

Homology

[Close]

BLAST of Cmc11g0291111 vs. NCBI nr
Match: XP_008459194.1 (PREDICTED: dehydrodolichyl diphosphate syntase complex subunit NUS1 isoform X2 [Cucumis melo] >XP_008459195.1 PREDICTED: dehydrodolichyl diphosphate syntase complex subunit NUS1 isoform X1 [Cucumis melo])

HSP 1 Score: 529.6 bits (1363), Expect = 1.5e-146
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0


Query: 1   MSLLHHFHLSNSPLGPMSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLI 60
           MSLLHHFHLSNSPLGPMSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLI
Sbjct: 1   MSLLHHFHLSNSPLGPMSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLI 60

Query: 61  SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQ 120
           SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQ
Sbjct: 61  SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQ 120

Query: 121 SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM 180
           SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM
Sbjct: 121 SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM 180

Query: 181 SGDQKQCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS 240
           SGDQKQCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS
Sbjct: 181 SGDQKQCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS 240

Query: 241 MLYGSLLKAIYKFTMVQQNYGK 263
           MLYGSLLKAIYKFTMVQQNYGK
Sbjct: 241 MLYGSLLKAIYKFTMVQQNYGK 262

[Close]

BLAST of Cmc11g0291111 vs. NCBI nr
Match: XP_004148090.1 (dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X2 [Cucumis sativus] >KGN63399.1 hypothetical protein Csa_022275 [Cucumis sativus])

HSP 1 Score: 508.8 bits (1309), Expect = 2.7e-140
Identity = 250/262 (95.42%), Postives = 256/262 (97.71%), Query Frame = 0


Query: 1   MSLLHHFHLSNSPLGPMSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLI 60
           MSLL HFHL NSPLGPMSIKVELQKIG+LGLQ+IWHFLHFIVSA YFVVGIATTLESYLI
Sbjct: 1   MSLLRHFHLLNSPLGPMSIKVELQKIGLLGLQLIWHFLHFIVSAFYFVVGIATTLESYLI 60

Query: 61  SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQ 120
           SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLK+IELLEWL+SLGIRSVCLYDAEGVLKQ
Sbjct: 61  SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKMIELLEWLVSLGIRSVCLYDAEGVLKQ 120

Query: 121 SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM 180
           SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM
Sbjct: 121 SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM 180

Query: 181 SGDQKQCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS 240
           SGD K+CLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS
Sbjct: 181 SGDHKRCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS 240

Query: 241 MLYGSLLKAIYKFTMVQQNYGK 263
           M YGSLLKAIYKFT V+QNYGK
Sbjct: 241 MKYGSLLKAIYKFTRVRQNYGK 262

[Close]

BLAST of Cmc11g0291111 vs. NCBI nr
Match: XP_031737302.1 (dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X1 [Cucumis sativus])

HSP 1 Score: 500.4 bits (1287), Expect = 9.7e-138
Identity = 250/273 (91.58%), Postives = 256/273 (93.77%), Query Frame = 0


Query: 1   MSLLHHFHLSNSPLGPMSIKVELQK-----------IGILGLQMIWHFLHFIVSASYFVV 60
           MSLL HFHL NSPLGPMSIKVELQK           IG+LGLQ+IWHFLHFIVSA YFVV
Sbjct: 1   MSLLRHFHLLNSPLGPMSIKVELQKMLIFFFSRLAQIGLLGLQLIWHFLHFIVSAFYFVV 60

Query: 61  GIATTLESYLISWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKIIELLEWLISLGIRSV 120
           GIATTLESYLISWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLK+IELLEWL+SLGIRSV
Sbjct: 61  GIATTLESYLISWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKMIELLEWLVSLGIRSV 120

Query: 121 CLYDAEGVLKQSKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANF 180
           CLYDAEGVLKQSKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANF
Sbjct: 121 CLYDAEGVLKQSKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANF 180

Query: 181 LLQNKWRKTNMSGDQKQCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRY 240
           LLQNKWRKTNMSGD K+CLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRY
Sbjct: 181 LLQNKWRKTNMSGDHKRCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRY 240

Query: 241 TEILHMGPLKSMLYGSLLKAIYKFTMVQQNYGK 263
           TEILHMGPLKSM YGSLLKAIYKFT V+QNYGK
Sbjct: 241 TEILHMGPLKSMKYGSLLKAIYKFTRVRQNYGK 273

[Close]

BLAST of Cmc11g0291111 vs. NCBI nr
Match: XP_008459196.1 (PREDICTED: dehydrodolichyl diphosphate syntase complex subunit NUS1 isoform X3 [Cucumis melo])

HSP 1 Score: 495.4 bits (1274), Expect = 3.1e-136
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 17  MSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLISWGFPCKYKHLNIDRV 76
           MSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLISWGFPCKYKHLNIDRV
Sbjct: 1   MSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLISWGFPCKYKHLNIDRV 60

Query: 77  QYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQ 136
           QYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQ
Sbjct: 61  QYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQ 120

Query: 137 GIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGDQKQCLSESQMTEA 196
           GIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGDQKQCLSESQMTEA
Sbjct: 121 GIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGDQKQCLSESQMTEA 180

Query: 197 LKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSMLYGSLLKAIYKFTMV 256
           LKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSMLYGSLLKAIYKFTMV
Sbjct: 181 LKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSMLYGSLLKAIYKFTMV 240

Query: 257 QQNYGK 263
           QQNYGK
Sbjct: 241 QQNYGK 246

[Close]

BLAST of Cmc11g0291111 vs. NCBI nr
Match: XP_031737304.1 (dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X4 [Cucumis sativus])

HSP 1 Score: 484.2 bits (1245), Expect = 7.2e-133
Identity = 241/262 (91.98%), Postives = 248/262 (94.66%), Query Frame = 0


Query: 1   MSLLHHFHLSNSPLGPMSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLI 60
           MSLL HFHL NSPLG       L +IG+LGLQ+IWHFLHFIVSA YFVVGIATTLESYLI
Sbjct: 1   MSLLRHFHLLNSPLG-------LAQIGLLGLQLIWHFLHFIVSAFYFVVGIATTLESYLI 60

Query: 61  SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQ 120
           SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLK+IELLEWL+SLGIRSVCLYDAEGVLKQ
Sbjct: 61  SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKMIELLEWLVSLGIRSVCLYDAEGVLKQ 120

Query: 121 SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM 180
           SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM
Sbjct: 121 SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM 180

Query: 181 SGDQKQCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS 240
           SGD K+CLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS
Sbjct: 181 SGDHKRCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS 240

Query: 241 MLYGSLLKAIYKFTMVQQNYGK 263
           M YGSLLKAIYKFT V+QNYGK
Sbjct: 241 MKYGSLLKAIYKFTRVRQNYGK 255

[Close]

BLAST of Cmc11g0291111 vs. ExPASy Swiss-Prot
Match: Q96E22 (Dehydrodolichyl diphosphate synthase complex subunit NUS1 OS=Homo sapiens OX=9606 GN=NUS1 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.7e-12
Identity = 52/196 (26.53%), Postives = 89/196 (45.41%), Query Frame = 0


Query: 81  IVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQSKEIILKKV-KNASEFQGID 140
           ++ E ++  +   I  L+ W +++GI  + +YD +G+ K++   ++ ++ K   E  G+D
Sbjct: 104 VITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNNSRLMDEILKQQQELLGLD 163

Query: 141 ------EPLQLNKKG-------ITLEFISASDGKEAIARAANFLLQNKWRKTNMSGDQKQ 200
                 E    N K        + ++ +S  DGK  I RAA    Q   +K     D   
Sbjct: 164 CSKYSPEFANSNDKDDQVLNCHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTD--- 223

Query: 201 CLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSMLYGSL 260
            L    +   L + GC   DPDL+L +GP     GF  W IR TEI+ +    ++ Y   
Sbjct: 224 -LDVDTLASLLSSNGCP--DPDLVLKFGPVDSTLGFLPWHIRLTEIVSLPSHLNISYEDF 283

Query: 261 LKAIYKFTMVQQNYGK 263
             A+ ++   +Q  GK
Sbjct: 284 FSALRQYAACEQRLGK 293

[Close]

BLAST of Cmc11g0291111 vs. ExPASy Swiss-Prot
Match: Q99LJ8 (Dehydrodolichyl diphosphate synthase complex subunit Nus1 OS=Mus musculus OX=10090 GN=Nus1 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.0e-09
Identity = 52/200 (26.00%), Postives = 88/200 (44.00%), Query Frame = 0


Query: 81  IVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQSKEIILKKV-KNASEFQGID 140
           +V E  +  +   I  L+ W +++GI  + +YD +G+ K++   ++ ++ K   E  G D
Sbjct: 108 LVTEEVQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNNSRLMDEILKQQQELLGQD 167

Query: 141 ------EPLQLNKKG-------ITLEFISASDGKEAIARAA----NFLLQNKWRKTNMSG 200
                 E    N K          ++ +S  DGK  I RAA      + Q + + T++  
Sbjct: 168 CSKYSAEFANSNDKDDQDLNCPSAVKVLSPEDGKADIVRAAQDFCQLVAQQQRKPTDLDV 227

Query: 201 DQKQCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSML 260
           D    L  S           G  DPDL+L +GP     GF  W+IR TEI+ +    ++ 
Sbjct: 228 DLLGSLLSSH----------GFPDPDLVLKFGPVDSTLGFLPWQIRLTEIVSLPSHLNIS 287

Query: 261 YGSLLKAIYKFTMVQQNYGK 263
           Y     A+ ++   +Q  GK
Sbjct: 288 YEDFFSALRQYAACEQRLGK 297

[Close]

BLAST of Cmc11g0291111 vs. ExPASy Swiss-Prot
Match: Q9Y7K8 (Dehydrodolichyl diphosphate synthase complex subunit nus1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=nus1 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.0e-08
Identity = 48/203 (23.65%), Postives = 88/203 (43.35%), Query Frame = 0


Query: 77  QYLAIVVESDEAYNTLKII----ELLEWLISLGIRSVCLYDAEGVLKQSKEIILKKVKNA 136
           +++A+++E  E      +I    EL  W +   IR + +Y+ +G LKQS E + K + + 
Sbjct: 61  KHIAVIIECVEDGGIEGLIHDACELSAWCVCSNIRELTIYERKGFLKQSPEAVEKAIYSH 120

Query: 137 SEFQ--------------GIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKT 196
             F                 DE  Q +   + +  I+  DG++AI      L     +K 
Sbjct: 121 LPFYLGGDKCTVHVTNPCSPDEKNQNDCVDLKVHLIAKEDGRDAIIDLTRGLADLCTKKV 180

Query: 197 NMSGDQKQCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPL 256
             S      L + ++ E++        +PDL++++ P     GFP W++R  EI H   L
Sbjct: 181 ISSTQVTLELIDKELKESVIP------EPDLLIIFAPLLKLQGFPPWQLRLCEIFHDPIL 240

Query: 257 KSMLYGSLLKAIYKFTMVQQNYG 262
            +  Y +  KA+  ++  +   G
Sbjct: 241 YTTNYLTFFKALVHYSNAEMRLG 257

[Close]

BLAST of Cmc11g0291111 vs. ExPASy Swiss-Prot
Match: Q12063 (Dehydrodolichyl diphosphate synthase complex subunit NUS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NUS1 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.4e-06
Identity = 49/195 (25.13%), Postives = 86/195 (44.10%), Query Frame = 0


Query: 96  ELLEWLISLGIRSVCLYDAEGVLKQS-KEIILKKVKNASEFQG------------IDEPL 155
           E++ W +S GI+ + LYD +G+L+++  E+ ++   N +++ G                +
Sbjct: 181 EIVCWTVSAGIKHLMLYDYDGILQRNVPELRMEIHSNLAKYFGPAHVPNYAVKIPHSNKI 240

Query: 156 QLNKKGITLEF-----ISASDGKEAIARAANFLLQNKWRKTNMSGDQKQC-------LSE 215
             N  GI  E      I A+  K+ IA   + L     R+T +   +          LS 
Sbjct: 241 FYNLDGIETETDVGNEIEANQEKDKIAIEISLLSNRDGRETIVDLTKTMAELCAVNELSV 300

Query: 216 SQMTEAL---KAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSMLYGSLL 263
           S +T  L   +     G +PDL+L +GP+    GFP W IR TE         ++Y   +
Sbjct: 301 SDITMDLVDSELKQLVGPEPDLLLYFGPSLDLQGFPPWHIRLTEFYWEKDNNEVIYSVFI 360

[Close]

BLAST of Cmc11g0291111 vs. ExPASy TrEMBL
Match: A0A1S3CAU5 (Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific) OS=Cucumis melo OX=3656 GN=LOC103498389 PE=3 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 7.2e-147
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0


Query: 1   MSLLHHFHLSNSPLGPMSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLI 60
           MSLLHHFHLSNSPLGPMSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLI
Sbjct: 1   MSLLHHFHLSNSPLGPMSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLI 60

Query: 61  SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQ 120
           SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQ
Sbjct: 61  SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQ 120

Query: 121 SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM 180
           SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM
Sbjct: 121 SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM 180

Query: 181 SGDQKQCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS 240
           SGDQKQCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS
Sbjct: 181 SGDQKQCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS 240

Query: 241 MLYGSLLKAIYKFTMVQQNYGK 263
           MLYGSLLKAIYKFTMVQQNYGK
Sbjct: 241 MLYGSLLKAIYKFTMVQQNYGK 262

[Close]

BLAST of Cmc11g0291111 vs. ExPASy TrEMBL
Match: A0A0A0LQY6 (Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific) OS=Cucumis sativus OX=3659 GN=Csa_2G437090 PE=3 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 1.3e-140
Identity = 250/262 (95.42%), Postives = 256/262 (97.71%), Query Frame = 0


Query: 1   MSLLHHFHLSNSPLGPMSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLI 60
           MSLL HFHL NSPLGPMSIKVELQKIG+LGLQ+IWHFLHFIVSA YFVVGIATTLESYLI
Sbjct: 1   MSLLRHFHLLNSPLGPMSIKVELQKIGLLGLQLIWHFLHFIVSAFYFVVGIATTLESYLI 60

Query: 61  SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQ 120
           SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLK+IELLEWL+SLGIRSVCLYDAEGVLKQ
Sbjct: 61  SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKMIELLEWLVSLGIRSVCLYDAEGVLKQ 120

Query: 121 SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM 180
           SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM
Sbjct: 121 SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM 180

Query: 181 SGDQKQCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS 240
           SGD K+CLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS
Sbjct: 181 SGDHKRCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS 240

Query: 241 MLYGSLLKAIYKFTMVQQNYGK 263
           M YGSLLKAIYKFT V+QNYGK
Sbjct: 241 MKYGSLLKAIYKFTRVRQNYGK 262

[Close]

BLAST of Cmc11g0291111 vs. ExPASy TrEMBL
Match: A0A1S3C9Q2 (Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific) OS=Cucumis melo OX=3656 GN=LOC103498389 PE=3 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 1.5e-136
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 17  MSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLISWGFPCKYKHLNIDRV 76
           MSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLISWGFPCKYKHLNIDRV
Sbjct: 1   MSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLISWGFPCKYKHLNIDRV 60

Query: 77  QYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQ 136
           QYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQ
Sbjct: 61  QYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQ 120

Query: 137 GIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGDQKQCLSESQMTEA 196
           GIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGDQKQCLSESQMTEA
Sbjct: 121 GIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGDQKQCLSESQMTEA 180

Query: 197 LKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSMLYGSLLKAIYKFTMV 256
           LKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSMLYGSLLKAIYKFTMV
Sbjct: 181 LKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSMLYGSLLKAIYKFTMV 240

Query: 257 QQNYGK 263
           QQNYGK
Sbjct: 241 QQNYGK 246

[Close]

BLAST of Cmc11g0291111 vs. ExPASy TrEMBL
Match: A0A1S3C9L9 (Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific) OS=Cucumis melo OX=3656 GN=LOC103498389 PE=3 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 5.8e-128
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 33  MIWHFLHFIVSASYFVVGIATTLESYLISWGFPCKYKHLNIDRVQYLAIVVESDEAYNTL 92
           MIWHFLHFIVSASYFVVGIATTLESYLISWGFPCKYKHLNIDRVQYLAIVVESDEAYNTL
Sbjct: 1   MIWHFLHFIVSASYFVVGIATTLESYLISWGFPCKYKHLNIDRVQYLAIVVESDEAYNTL 60

Query: 93  KIIELLEWLISLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQGIDEPLQLNKKGITLE 152
           KIIELLEWLISLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQGIDEPLQLNKKGITLE
Sbjct: 61  KIIELLEWLISLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQGIDEPLQLNKKGITLE 120

Query: 153 FISASDGKEAIARAANFLLQNKWRKTNMSGDQKQCLSESQMTEALKAVGCGGLDPDLILV 212
           FISASDGKEAIARAANFLLQNKWRKTNMSGDQKQCLSESQMTEALKAVGCGGLDPDLILV
Sbjct: 121 FISASDGKEAIARAANFLLQNKWRKTNMSGDQKQCLSESQMTEALKAVGCGGLDPDLILV 180

Query: 213 YGPTRCHFGFPAWRIRYTEILHMGPLKSMLYGSLLKAIYKFTMVQQNYGK 263
           YGPTRCHFGFPAWRIRYTEILHMGPLKSMLYGSLLKAIYKFTMVQQNYGK
Sbjct: 181 YGPTRCHFGFPAWRIRYTEILHMGPLKSMLYGSLLKAIYKFTMVQQNYGK 230

[Close]

BLAST of Cmc11g0291111 vs. ExPASy TrEMBL
Match: A0A5A7THT7 (Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00450 PE=3 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.2e-120
Identity = 219/220 (99.55%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 14  LGPMSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLISWGFPCKYKHLNI 73
           +GPMSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLISWGFPCKYKHLNI
Sbjct: 8   MGPMSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLISWGFPCKYKHLNI 67

Query: 74  DRVQYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQSKEIILKKVKNAS 133
           DRVQYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQSKEIILKKVKNAS
Sbjct: 68  DRVQYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQSKEIILKKVKNAS 127

Query: 134 EFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGDQKQCLSESQM 193
           EFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGDQKQCLSESQM
Sbjct: 128 EFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGDQKQCLSESQM 187

Query: 194 TEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEIL 234
           TEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEIL
Sbjct: 188 TEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEIL 227

[Close]

BLAST of Cmc11g0291111 vs. TAIR 10
Match: AT1G11755.1 (Undecaprenyl pyrophosphate synthetase family protein )

HSP 1 Score: 226.9 bits (577), Expect = 1.9e-59
Identity = 112/238 (47.06%), Postives = 167/238 (70.17%), Query Frame = 0


Query: 25  KIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLISWGFPCKYKHLNIDRVQYLAIVVE 84
           +IG LGL ++W F+H +VS  Y V GI   +ESY I+ G   KY  +++++++ LA+VV+
Sbjct: 16  QIGDLGLNLLWRFIHIVVSLWYIVSGIFEAIESYAITLGLNKKYGSIDLEKLRCLAVVVD 75

Query: 85  SDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQGIDEPLQL 144
            + A +   ++ELL+WL ++G++ V L+D++G+LK+SK++IL+ V  +   + I++ +  
Sbjct: 76  IEAAQDVANVVELLQWLTTIGVKQVGLFDSQGLLKKSKDLILETVPGSMLLEEIEKDVAP 135

Query: 145 NKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGDQ-KQCLSESQMTEALKAVGCG 204
           + K I LEFIS+SD KEA+ +AAN LLQ   + ++   D+ +   +ES + +AL+ VG  
Sbjct: 136 DGKRIALEFISSSDNKEAVMKAANILLQRYLKSSHPEDDKGEDFFTESHLNDALRVVGEN 195

Query: 205 GLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSMLYGSLLKAIYKFTMVQQNYG 262
              PDL+LVYGP R H GFPAWR+RYTEI+HMG LK M YGSLLKAI+KFT V QNYG
Sbjct: 196 VHVPDLLLVYGPIRSHLGFPAWRLRYTEIVHMGTLKYMRYGSLLKAIHKFTGVHQNYG 253

The following BLAST results are available for this feature:

BLAST of Cmc11g0291111 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459194.1	1.5e-146	100.00	PREDICTED: dehydrodolichyl diphosphate syntase complex subunit NUS1 isoform X2 [...	[more]
XP_004148090.1	2.7e-140	95.42	dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X2 [Cucumis sa...	[more]
XP_031737302.1	9.7e-138	91.58	dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X1 [Cucumis sa...	[more]
XP_008459196.1	3.1e-136	100.00	PREDICTED: dehydrodolichyl diphosphate syntase complex subunit NUS1 isoform X3 [...	[more]
XP_031737304.1	7.2e-133	91.98	dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X4 [Cucumis sa...	[more]

BLAST of Cmc11g0291111 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96E22	1.7e-12	26.53	Dehydrodolichyl diphosphate synthase complex subunit NUS1 OS=Homo sapiens OX=960...	[more]
Q99LJ8	1.0e-09	26.00	Dehydrodolichyl diphosphate synthase complex subunit Nus1 OS=Mus musculus OX=100...	[more]
Q9Y7K8	2.0e-08	23.65	Dehydrodolichyl diphosphate synthase complex subunit nus1 OS=Schizosaccharomyces...	[more]
Q12063	2.4e-06	25.13	Dehydrodolichyl diphosphate synthase complex subunit NUS1 OS=Saccharomyces cerev...	[more]

BLAST of Cmc11g0291111 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CAU5	7.2e-147	100.00	Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate spe...	[more]
A0A0A0LQY6	1.3e-140	95.42	Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate spe...	[more]
A0A1S3C9Q2	1.5e-136	100.00	Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate spe...	[more]
A0A1S3C9L9	5.8e-128	100.00	Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate spe...	[more]
A0A5A7THT7	1.2e-120	99.55	Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate spe...	[more]

BLAST of Cmc11g0291111 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11755.1	1.9e-59	47.06	Undecaprenyl pyrophosphate synthetase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036424	Decaprenyl diphosphate synthase-like superfamily	GENE3D	3.40.1180.10		coord: 116..262 e-value: 1.7E-9 score: 39.2
IPR036424	Decaprenyl diphosphate synthase-like superfamily	SUPERFAMILY	64005	Undecaprenyl diphosphate synthase	coord: 77..254
IPR038887	Dehydrodolichyl diphosphate synthase complex subunit Nus1	PANTHER	PTHR21528	UNCHARACTERIZED	coord: 23..262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0291111.1	Cmc11g0291111.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019408	dolichol biosynthetic process
cellular_component	GO:1904423	dehydrodolichyl diphosphate synthase complex
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups