Cmc11g0290151 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0290151
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr11: 4922552 .. 4922923 (+)
RNA-Seq ExpressionCmc11g0290151
SyntenyCmc11g0290151
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTGCCACATCAACCTCAAATTCCATCAACCTTCCCTATATAAATCTTCTCCACACCCTTTCTCAAAATTCCATTTTACATAAAGAAAAGAAAAAAAAATAGTAAAGTAAAAATGTCGGCAATGGTAGAGTCATGGATGAACGAACTTGGAAAATGGAAAAACAGAGTTGAAGCTCAAAACAACAACAACAACAACAAGCCATTGATGCCCAAATCCAATCAACTCCAAACAGATCACTTCAAACAACCTCCCAAAACCCACATCCCGGATTCCGACGACACAGATACCTCCGTCCTCTCTGAATCCACCATTTGTTTTCTCATAGATCGCTTTGCTCCTTTGTGATTATGCTCTCTTTCAATAACTCCTCT

mRNA sequence

TGTGCCACATCAACCTCAAATTCCATCAACCTTCCCTATATAAATCTTCTCCACACCCTTTCTCAAAATTCCATTTTACATAAAGAAAAGAAAAAAAAATAGTAAAGTAAAAATGTCGGCAATGGTAGAGTCATGGATGAACGAACTTGGAAAATGGAAAAACAGAGTTGAAGCTCAAAACAACAACAACAACAACAAGCCATTGATGCCCAAATCCAATCAACTCCAAACAGATCACTTCAAACAACCTCCCAAAACCCACATCCCGGATTCCGACGACACAGATACCTCCGTCCTCTCTGAATCCACCATTTGTTTTCTCATAGATCGCTTTGCTCCTTTGTGATTATGCTCTCTTTCAATAACTCCTCT

Coding sequence (CDS)

ATGTCGGCAATGGTAGAGTCATGGATGAACGAACTTGGAAAATGGAAAAACAGAGTTGAAGCTCAAAACAACAACAACAACAACAAGCCATTGATGCCCAAATCCAATCAACTCCAAACAGATCACTTCAAACAACCTCCCAAAACCCACATCCCGGATTCCGACGACACAGATACCTCCGTCCTCTCTGAATCCACCATTTGTTTTCTCATAGATCGCTTTGCTCCTTTGTGA

Protein sequence

MSAMVESWMNELGKWKNRVEAQNNNNNNKPLMPKSNQLQTDHFKQPPKTHIPDSDDTDTSVLSESTICFLIDRFAPL
Homology
[Close]
BLAST of Cmc11g0290151 vs. NCBI nr
Match: KGN61756.1 (hypothetical protein Csa_006080 [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 2.0e-27
Identity = 67/77 (87.01%), Postives = 71/77 (92.21%), Query Frame = 0 

Query: 1   MSAMVESWMNELGKWKNRVEAQNNNNNNKPLMPKSNQLQTDHFKQPPKTHIPDSDDTDTS 60
           MSAMVESWMNELGKW+NRVEAQ +NNN KPLMPKS QLQTDHFKQP KTH+ DSDDT+TS
Sbjct: 37  MSAMVESWMNELGKWRNRVEAQ-DNNNKKPLMPKSKQLQTDHFKQPAKTHMADSDDTETS 96

Query: 61  VLSESTICFLIDRFAPL 78
           VLSESTIC LIDRFAPL
Sbjct: 97  VLSESTICLLIDRFAPL 112

[Close]
BLAST of Cmc11g0290151 vs. NCBI nr
Match: KAG6571144.1 (hypothetical protein SDJN03_30059, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 79.3 bits (194), Expect = 1.6e-11
Identity = 49/77 (63.64%), Postives = 52/77 (67.53%), Query Frame = 0 

Query: 1  MSAMVESWMNELGKWKNRVEAQNNNNNNKPLMPKSNQ-LQTDHFKQPPKTHIPDSDDTDT 60
          MSAMVESWM+ELGKWKNRVEAQ      KPLMPKSNQ LQ D            SDDT+T
Sbjct: 1  MSAMVESWMSELGKWKNRVEAQ---KKKKPLMPKSNQFLQNDVVS-------AHSDDTET 60

Query: 61 SVLSESTICFLIDRFAP 77
              E+TIC LIDRFAP
Sbjct: 61 ERERETTICLLIDRFAP 67

[Close]
BLAST of Cmc11g0290151 vs. NCBI nr
Match: KAG6605111.1 (hypothetical protein SDJN03_02428, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 57.4 bits (137), Expect = 6.4e-05
Identity = 38/74 (51.35%), Postives = 46/74 (62.16%), Query Frame = 0 

Query: 1  MSAMVESWMNELGKWKNRVEAQNNNNNNKPLMPKSNQLQTDHFKQPPKTHI--PDSDDTD 60
          M+AMVESWM+ELGKWKNRVEAQ      KPLMPKS        K+     +   DSDD +
Sbjct: 1  MAAMVESWMSELGKWKNRVEAQ----KKKPLMPKSKLCHQRDLKESENNLVISADSDDRE 60

Query: 61 TSVLSESTICFLID 73
           + LS+STI  + D
Sbjct: 61 -ATLSDSTILCVND 69

[Close]
BLAST of Cmc11g0290151 vs. ExPASy TrEMBL
Match: A0A0A0LP24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237740 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 9.9e-28
Identity = 67/77 (87.01%), Postives = 71/77 (92.21%), Query Frame = 0 

Query: 1   MSAMVESWMNELGKWKNRVEAQNNNNNNKPLMPKSNQLQTDHFKQPPKTHIPDSDDTDTS 60
           MSAMVESWMNELGKW+NRVEAQ +NNN KPLMPKS QLQTDHFKQP KTH+ DSDDT+TS
Sbjct: 37  MSAMVESWMNELGKWRNRVEAQ-DNNNKKPLMPKSKQLQTDHFKQPAKTHMADSDDTETS 96

Query: 61  VLSESTICFLIDRFAPL 78
           VLSESTIC LIDRFAPL
Sbjct: 97  VLSESTICLLIDRFAPL 112

The following BLAST results are available for this feature:
BLAST of Cmc11g0290151 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61756.12.0e-2787.01hypothetical protein Csa_006080 [Cucumis sativus][more]
KAG6571144.11.6e-1163.64hypothetical protein SDJN03_30059, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6605111.16.4e-0551.35hypothetical protein SDJN03_02428, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Cmc11g0290151 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc11g0290151 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LP249.9e-2887.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237740 PE=4 SV=1[more]
BLAST of Cmc11g0290151 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..59
NoneNo IPR availablePANTHERPTHR36346:SF2EXPRESSED PROTEINcoord: 1..77
NoneNo IPR availablePANTHERPTHR36346EXPRESSED PROTEINcoord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0290151.1Cmc11g0290151.1mRNA