Cmc11g0289151 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0289151
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 3686989 .. 3688965 (-)
RNA-Seq Expression	Cmc11g0289151
Synteny	Cmc11g0289151

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCAGCGGAATTGAAAGAACTGAAGGTGCAGTTACAGGAACTGCTTGATATGGGCTTCATTCGGCCGAGTGTGCCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGCCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAATCGATATCCCTTGCCCAGGATCGACGACCTGTTTGACCAGTTACATGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCAGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACCAAAGACGGCCTTTCGTTCCAGATACGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGTAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGCAGTTCCTAGACACTTTTGTGATCGTGTTTATTGATGATATCTTGATATATTCCAAGACGGAGGCTGAGCATGAGGAGCATTTACATATGGCTCTGCAAACCCTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGTGAGTTTTGGTTGAAGCAGGTGTCCTTTCTAGGTCATGTGGTTTCTAAGGCTAGAGTTTCTGTGGATCCAGCTAAGATAGAGGCAATCACCAGTTGGCCCCGACCTTCCACAATCAGTGAAGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCCCGTATAGCTACTCCTCTTACTCAGTTGACCAAGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCTAGAACCTTAAACAGAAGCTAGTTACTGCACCGGTTCTTACCGTACCTGATGGTTCCGGCAGTTTTGTGATTTACAGTGATGCTTCTAAGAAGGGTTTAGGTTATGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACACAATTTAGAGTTGGCAGCAGTGGTTTTTGCATTGAAGATATGGAGGCATTACTTGTATGGTGAAAAGATACAGATCTTCACGAATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAACGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCGAGGCAAGGGAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGAGGGCTGAGATTGCAGTGTCAGTAGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCTGACTTTGAGGCAAAAGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGCAGAGGCAGGGCAAGCTGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGTCTCTGTGTGCCATCACATAGTGCGGTTAAAACAGAACTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGTGTAATATGAAGAGAGAGGTGGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCGTACCGGAATGGAAGTGGGAAAACGTGTCCATGGGTTTCATTGCAGGACTGCCAAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTTGACAGGCTTACCAAATCAGTGCACTTCGTTCTGGGTAAATCCACCTATACCGCTAGTAAGTGGGCACAGTTGTACATGTCTAAGATAGTGAGACTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTGCAGATTGCTATGCGCACGAGGTTAG

mRNA sequence

ATGGCCCCAGCGGAATTGAAAGAACTGAAGGTGCAGTTACAGGAACTGCTTGATATGGGCTTCATTCGGCCGAGTGTGCCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGCCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAATCGATATCCCTTGCCCAGGATCGACGACCTGTTTGACCAGTTACATGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCAGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACCAAAGACGGCCTTTCGTTCCAGATACGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGTAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGCAGTTCCTAGACACTTTTGTGATCGTGTTTATTGATGATATCTTGATATATTCCAAGACGGAGGCTGAGCATGAGGAGCATTTACATATGGCTCTGCAAACCCTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGTGAGTTTTGGTTGAAGCAGGTGTCCTTTCTAGGTCATGTGGTTTCTAAGGCTAGAGTTTCTGTGGATCCAGCTAAGATAGAGGCAATCACCAGTTGGCCCCGACCTTCCACAATCAGTGAAGTTCGTAGCTTTCTGGGTTTAGCAGGTTATGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACACAATTTAGAGTTGGCAGCAGTGGTTTTTGCATTGAAGATATGGAGGCATTACTTGTATGGTGAAAAGATACAGATCTTCACGAATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAACGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCGAGGCAAGGGAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGAGGGCTGAGATTGCAGTGTCAGTAGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCTGACTTTGAGGCAAAAGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGCAGAGGCAGGGCAAGCTGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGTCTCTGTGTGCCATCACATAGTGCGGTTAAAACAGAACTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGTGTAATATGAAGAGAGAGGTGGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCGTACCGGAATGGAAGTGGGAAAACGTGTCCATGGGTTTCATTGCAGGACTGCCAAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTTGACAGGCTTACCAAATCAGTGCACTTCGTTCTGGGTAAATCCACCTATACCGCTAGTAAGTGGGCACAGTTGTACATGTCTAAGATAGTGAGACTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTGCAGATTGCTATGCGCACGAGGTTAG

Coding sequence (CDS)

ATGGCCCCAGCGGAATTGAAAGAACTGAAGGTGCAGTTACAGGAACTGCTTGATATGGGCTTCATTCGGCCGAGTGTGCCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGCCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAATCGATATCCCTTGCCCAGGATCGACGACCTGTTTGACCAGTTACATGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCAGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACCAAAGACGGCCTTTCGTTCCAGATACGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGTAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGCAGTTCCTAGACACTTTTGTGATCGTGTTTATTGATGATATCTTGATATATTCCAAGACGGAGGCTGAGCATGAGGAGCATTTACATATGGCTCTGCAAACCCTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGTGAGTTTTGGTTGAAGCAGGTGTCCTTTCTAGGTCATGTGGTTTCTAAGGCTAGAGTTTCTGTGGATCCAGCTAAGATAGAGGCAATCACCAGTTGGCCCCGACCTTCCACAATCAGTGAAGTTCGTAGCTTTCTGGGTTTAGCAGGTTATGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACACAATTTAGAGTTGGCAGCAGTGGTTTTTGCATTGAAGATATGGAGGCATTACTTGTATGGTGAAAAGATACAGATCTTCACGAATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAACGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCGAGGCAAGGGAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGAGGGCTGAGATTGCAGTGTCAGTAGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCTGACTTTGAGGCAAAAGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGCAGAGGCAGGGCAAGCTGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGTCTCTGTGTGCCATCACATAGTGCGGTTAAAACAGAACTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGTGTAATATGAAGAGAGAGGTGGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCGTACCGGAATGGAAGTGGGAAAACGTGTCCATGGGTTTCATTGCAGGACTGCCAAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTTGACAGGCTTACCAAATCAGTGCACTTCGTTCTGGGTAAATCCACCTATACCGCTAGTAAGTGGGCACAGTTGTACATGTCTAAGATAGTGAGACTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTGCAGATTGCTATGCGCACGAGGTTAG

Protein sequence

MAPAELKELKVQLQELLDMGFIRPSVPPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPVVFMDLMNRVFRQFLDTFVIVFIDDILIYSKTEAEHEEHLHMALQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPAKIEAITSWPRPSTISEVRSFLGLAGYVLMQQGKVVAYASRQLKSHEQNYPTHNLELAAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHRGKGNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSHSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMGFIAGLPRTLRGFTVIWVVVDRLTKSVHFVLGKSTYTASKWAQLYMSKIVRLHGVPVSIVSDRDARFTSKFWKGCRLLCARG

Homology

[Close]

BLAST of Cmc11g0289151 vs. NCBI nr
Match: TYK04315.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1077.0 bits (2784), Expect = 0.0e+00
Identity = 542/599 (90.48%), Postives = 553/599 (92.32%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDMGFIRPSVPPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAP ELKELKVQLQELLD GFIRPSV PWGAPVLFVKKKDGSM LCIDYRELNKVTVKNR
Sbjct: 681  MAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNR 740

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL GATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 741  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 800

Query: 121  NAPVVFMDLMNRVFRQFLDTFVIVFIDDILIYSKTEAEHEEHLHMALQTLRDNKLYAKFS 180
            NAP VFMDLMNRVFR+FLDTFVIVFIDDILIYSKTEAEHEEHL M LQTLRDNKLYAKFS
Sbjct: 801  NAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 860

Query: 181  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAITSWPRPSTISEVRSFLGL----------- 240
            KCEFWLKQVSFLGHVVSKA VSVDPAKIEA+TSWPRPS +SEVRSFLG            
Sbjct: 861  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSIVSEVRSFLGKEFLSFGARHFC 920

Query: 241  --------AGYVLMQQGKVVAYASRQLKSHEQNYPTHNLELAAVVFALKIWRHYLYGEKI 300
                     G VLM+QGKVVAYASRQLKSHEQNYPTH+LELAAVVFALKIWRHYLYGEKI
Sbjct: 921  DSDASKKGLGCVLMKQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI 980

Query: 301  QIFTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHRGKGNVVADALSRKVSHSAAL 360
            QIFT+HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GK NVVADALS+KVSHSAAL
Sbjct: 981  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSKKVSHSAAL 1040

Query: 361  ITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAEAG 420
            ITRQ PLHRDLERAEIAVSVGAVTMQLAQLTVQ TLRQ+IIDAQSNDPYLVEKRGLAEAG
Sbjct: 1041 ITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG 1100

Query: 421  QAVEFSISSDGGLLFERRLCVPSHSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWC 480
            QAVEF ISSDGG LFERRLCVPS S VKTELLSEAHSSPFSMHPGSTK+YQDLKRVYWW 
Sbjct: 1101 QAVEFFISSDGGHLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKIYQDLKRVYWWR 1160

Query: 481  NMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMGFIAGLPRTLRGFTV 540
            NMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSM FI GLPRT RGFTV
Sbjct: 1161 NMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITGLPRTQRGFTV 1220

Query: 541  IWVVVDRLTKSVHFVLGKSTYTASKWAQLYMSKIVRLHGVPVSIVSDRDARFTSKFWKG 581
            IWVVVDRLTK VHFV GKST+TASKWAQLYMS+IVRLHGVPVSIVSDRDARFTSKFWKG
Sbjct: 1221 IWVVVDRLTKLVHFVPGKSTFTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKG 1279

[Close]

BLAST of Cmc11g0289151 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1075.8 bits (2781), Expect = 0.0e+00
Identity = 550/650 (84.62%), Postives = 559/650 (86.00%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDMGFIRPSVPPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLD GFIRPSV PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL GATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPVVFMDLMNRVFRQFLDTFVIVFIDDILIYSKTEAEHEEHLHMALQTLRDNKLYAKFS 180
            NAP VFMDLMNRVFR+FLDTFVIVFIDDILIYSKTEAEHEEHL M LQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAITSWPRPSTISEVRSFLGLAGY-------- 240
            KCEFWLKQVSFLGHVVSKA VSVDPAKIEA+T W RPST+SEVRSFLGLAGY        
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  --VLMQQGKVVAYASRQLKSHEQNYPTHNLELAAVVFALKIWRHYLYGEKIQIFTNHKSL 360
              VLMQQGKVVAYASRQLKSHEQNYPTH+LELAAVVFALKIWRHYLYGEKIQIFT+HKSL
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1193

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHRGKGNVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYH GK NVVADALSRKVSHSAALITRQAPLHR
Sbjct: 1194 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1253

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 480
            DLERAEIAVSVGAVTMQLAQLTVQ TLRQ+IIDAQSNDPYLVEKRGLAEAGQ  EFS+SS
Sbjct: 1254 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 1313

Query: 481  DGGLLFERRLCVPSHSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVAEF 540
            DGGLLFERRLCVPS SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWW NMKREVAEF
Sbjct: 1314 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1373

Query: 541  VSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMGFIAGLPRTLRGFTVIWVVVDRLT 581
            VSKCLVCQQVKAPRQKPAGLLQPLS+PEWKWENVSM FI GLPRTLRGFTVIWVVVDRLT
Sbjct: 1374 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1433

[Close]

BLAST of Cmc11g0289151 vs. NCBI nr
Match: KAA0057672.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1073.9 bits (2776), Expect = 4.5e-310
Identity = 549/650 (84.46%), Postives = 560/650 (86.15%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDMGFIRPSVPPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLD GFIRPSV PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 98  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 157

Query: 61  YPLPRIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQL GATVFSKIDLRSG HQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 158 YPLPRIDDLFDQLQGATVFSKIDLRSGCHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 217

Query: 121 NAPVVFMDLMNRVFRQFLDTFVIVFIDDILIYSKTEAEHEEHLHMALQTLRDNKLYAKFS 180
           NAP VFMDLMNRVFR+FLDTFVIVFIDDILIYSKTEAEHEEHL M LQTLRDNKLYAKFS
Sbjct: 218 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 277

Query: 181 KCEFWLKQVSFLGHVVSKARVSVDPAKIEAITSWPRPSTISEVRSFLGLAGY-------- 240
           KCEFWLKQVSFLGHVVSKA VSVDPAKIEA+T W RPST+SEVRSFLGLAGY        
Sbjct: 278 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 337

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 338 SRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 397

Query: 301 --VLMQQGKVVAYASRQLKSHEQNYPTHNLELAAVVFALKIWRHYLYGEKIQIFTNHKSL 360
             VLMQQGKVVAYASRQLKSHEQNYPTH+LELAAVVFALKIWRHYLYGEKIQIFT+HKSL
Sbjct: 398 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 457

Query: 361 KYFFTQKELNMRQRRWLELVKDYDCEILYHRGKGNVVADALSRKVSHSAALITRQAPLHR 420
           KYFFTQKELNMRQRRWLELVKDYDCEILYH GK NVVADALSRKVSHSAALITRQAPLHR
Sbjct: 458 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 517

Query: 421 DLERAEIAVSVGAVTMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 480
           DLERAEIAVSVGAVTMQLAQLTVQ TLRQ+IIDAQSNDPYLVEKRGLAEAGQAVEFS+SS
Sbjct: 518 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 577

Query: 481 DGGLLFERRLCVPSHSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVAEF 540
           DGGLLFERRLCVPS SAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWW NMKREVAEF
Sbjct: 578 DGGLLFERRLCVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEF 637

Query: 541 VSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMGFIAGLPRTLRGFTVIWVVVDRLT 581
           VSKCLVCQQVKAPRQKPAGLLQPLS+PEWKWENVSM FIAGLPRTLRGFTVIWVVVDRLT
Sbjct: 638 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPRTLRGFTVIWVVVDRLT 697

[Close]

BLAST of Cmc11g0289151 vs. NCBI nr
Match: KAA0037817.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1071.6 bits (2770), Expect = 2.3e-309
Identity = 542/625 (86.72%), Postives = 557/625 (89.12%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDMGFIRPSVPPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLD GFIRPS+ PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 442  MAPAELKELKVQLQELLDKGFIRPSLSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 501

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL GATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSF LT
Sbjct: 502  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFCLT 561

Query: 121  NAPVVFMDLMNRVFRQFLDTFVIVFIDDILIYSKTEAEHEEHLHMALQTLRDNKLYAKFS 180
            NAP VFMDLMNRVFR+FLDTFVIVFIDDILIYSKTEAEHEEHL + LQTLRDNKLYAKFS
Sbjct: 562  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 621

Query: 181  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAITSWPRPSTISEVRSFLGLAGY-------- 240
            KCEFWLKQVSFLGHVVSKA VSVDPAKIEA+T W RPST+SEVRSFLGLAGY        
Sbjct: 622  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRKACED 681

Query: 241  -------------------------------------VLMQQGKVVAYASRQLKSHEQNY 300
                                                 VLMQQGKVVAYASRQLKSHEQNY
Sbjct: 682  SFENLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNY 741

Query: 301  PTHNLELAAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDYDC 360
            PTH+LELAA+VFALKIWRHYLYGEKIQIFT HKSLKYFFTQKELNMRQRRWLELVKDYDC
Sbjct: 742  PTHDLELAAMVFALKIWRHYLYGEKIQIFTIHKSLKYFFTQKELNMRQRRWLELVKDYDC 801

Query: 361  EILYHRGKGNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQL 420
            EILYH GK NVVADALSRKVSHSAALITRQA LHRDLERAEIAVSVGAVTMQLAQLT+Q 
Sbjct: 802  EILYHPGKANVVADALSRKVSHSAALITRQAHLHRDLERAEIAVSVGAVTMQLAQLTIQP 861

Query: 421  TLRQKIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSHSAVKTELLSE 480
            TLRQ+ IDAQ NDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPS SAVKTELLSE
Sbjct: 862  TLRQRTIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSE 921

Query: 481  AHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLS 540
            AHSSPFSMHPGSTKMYQDLKRVYWW NMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLS
Sbjct: 922  AHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLS 981

Query: 541  VPEWKWENVSMGFIAGLPRTLRGFTVIWVVVDRLTKSVHFVLGKSTYTASKWAQLYMSKI 581
            +P+WKWENVSM FI GLPRTLRGFTVIWVVVDRLTKS HFV GKSTYTASKWAQLYMS+I
Sbjct: 982  IPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEI 1041

[Close]

BLAST of Cmc11g0289151 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1071.2 bits (2769), Expect = 3.2e-309
Identity = 547/649 (84.28%), Postives = 559/649 (86.13%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDMGFIRPSVPPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLD GFIRPSV PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 580  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL GATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121  NAPVVFMDLMNRVFRQFLDTFVIVFIDDILIYSKTEAEHEEHLHMALQTLRDNKLYAKFS 180
            NAP VFMDLMNRVFR+FLDTFVIVFIDDILIYSKTEAEHEEHL M LQTLRDNKLYAKFS
Sbjct: 700  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAITSWPRPSTISEVRSFLGLAGY-------- 240
            KCEFWLKQVSFLGHVVSKA VSVDPAKIEA+T W RPST+SEVRSFLGLAGY        
Sbjct: 760  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 820  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301  --VLMQQGKVVAYASRQLKSHEQNYPTHNLELAAVVFALKIWRHYLYGEKIQIFTNHKSL 360
              VLMQQGKVVAYASRQLKSHEQNYPTH+LELAAVVFALKIWRHYLYGEKIQIFT+HKSL
Sbjct: 880  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHRGKGNVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYH GK NVVADALSRKVSHSAALITRQAPLHR
Sbjct: 940  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 999

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 480
            DLERAEIAVSVGAVTMQLAQLTVQ TLRQ+IIDAQSNDPYLVEKRGLAEAGQAVEFS+SS
Sbjct: 1000 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1059

Query: 481  DGGLLFERRLCVPSHSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVAEF 540
            DGGLLFERRLCVPS S VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWW NMKREVAEF
Sbjct: 1060 DGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEF 1119

Query: 541  VSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMGFIAGLPRTLRGFTVIWVVVDRLT 580
            VS+CLVCQQVKAPRQKPAGLLQPLS+PEWKWENVSM FI GLPRTLRGFTVIWVVVDRLT
Sbjct: 1120 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1179

[Close]

BLAST of Cmc11g0289151 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 311.6 bits (797), Expect = 1.9e-83
Identity = 203/643 (31.57%), Postives = 309/643 (48.06%), Query Frame = 0


Query: 7    KELKVQLQELLDMGFIRPSVPPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI 66
            +E+   +Q+LLD  FI PS  P  +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRI
Sbjct: 610  QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 669

Query: 67   DDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPVVF 126
            D+L  ++  A +F+ +DL SGYHQ+ ++  D  KTAF +  G YE+ VM FGL NAP  F
Sbjct: 670  DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 729

Query: 127  MDLMNRVFRQFLDTFVIVFIDDILIYSKTEAEHEEHLHMALQTLRDNKLYAKFSKCEFWL 186
               M   FR     FV V++DDILI+S++  EH +HL   L+ L++  L  K  KC+F  
Sbjct: 730  ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFAS 789

Query: 187  KQVSFLGHVVSKARVSVDPAKIEAITSWPRPSTISEVRSFLGLAGYV------------- 246
            ++  FLG+ +   +++    K  AI  +P P T+ + + FLG+  Y              
Sbjct: 790  EETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP 849

Query: 247  -----------LMQQGK------------------------------------------- 306
                         +Q K                                           
Sbjct: 850  IQLFICDKSQWTEKQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVD 909

Query: 307  -------VVAYASRQLKSHEQNYPTHNLELAAVVFALKIWRHYLYGEKIQIFTNHKSLKY 366
                   VV Y S+ L+S ++NYP   LEL  ++ AL  +R+ L+G+   + T+H SL  
Sbjct: 910  NKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLS 969

Query: 367  FFTQKELNMRQRRWLELVKDYDCEILYHRGKGNVVADALSRKVSHSAALITRQAPLHRDL 426
               + E   R +RWL+ +  YD  + Y  G  NVVADA+SR V       +R        
Sbjct: 970  LQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAVYTITPETSRPIDTESWK 1029

Query: 427  ERAEIAVSVGAVTMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDG 486
               +      AV + + +LT      + +   +S      +K  L+E  +   +S+  D 
Sbjct: 1030 SYYKSDPLCSAVLIHMKELTQHNVTPEDMSAFRSYQ----KKLELSETFRK-NYSL-EDE 1089

Query: 487  GLLFERRLCVPSHSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVAEFVS 546
             + ++ RL VP         L   H+  F  H G T     +  +Y+W  ++  + +++ 
Sbjct: 1090 MIYYQDRLVVPIKQQNAVMRLYHDHTL-FGGHFGVTVTLAKISPIYYWPKLQHSIIQYIR 1149

Query: 547  KCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMGFIAGLPRTLRGFTVIWVVVDRLTKS 576
             C+ CQ +K+ R +  GLLQPL + E +W ++SM F+ GLP T     +I VVVDR +K 
Sbjct: 1150 TCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKR 1209

[Close]

BLAST of Cmc11g0289151 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 311.2 bits (796), Expect = 2.5e-83
Identity = 202/643 (31.42%), Postives = 309/643 (48.06%), Query Frame = 0


Query: 7    KELKVQLQELLDMGFIRPSVPPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI 66
            +E+   +Q+LLD  FI PS  P  +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRI
Sbjct: 636  QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 695

Query: 67   DDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPVVF 126
            D+L  ++  A +F+ +DL SGYHQ+ ++  D  KTAF +  G YE+ VM FGL NAP  F
Sbjct: 696  DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 755

Query: 127  MDLMNRVFRQFLDTFVIVFIDDILIYSKTEAEHEEHLHMALQTLRDNKLYAKFSKCEFWL 186
               M   FR     FV V++DDILI+S++  EH +HL   L+ L++  L  K  KC+F  
Sbjct: 756  ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFAS 815

Query: 187  KQVSFLGHVVSKARVSVDPAKIEAITSWPRPSTISEVRSFLGLAGYV------------- 246
            ++  FLG+ +   +++    K  AI  +P P T+ + + FLG+  Y              
Sbjct: 816  EETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP 875

Query: 247  -----------LMQQGK------------------------------------------- 306
                         +Q K                                           
Sbjct: 876  IQLFICDKSQWTEKQDKAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVD 935

Query: 307  -------VVAYASRQLKSHEQNYPTHNLELAAVVFALKIWRHYLYGEKIQIFTNHKSLKY 366
                   VV Y S+ L+S ++NYP   LEL  ++ AL  +R+ L+G+   + T+H SL  
Sbjct: 936  NKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLS 995

Query: 367  FFTQKELNMRQRRWLELVKDYDCEILYHRGKGNVVADALSRKVSHSAALITRQAPLHRDL 426
               + E   R +RWL+ +  YD  + Y  G  NVVADA+SR +       +R        
Sbjct: 996  LQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAIYTITPETSRPIDTESWK 1055

Query: 427  ERAEIAVSVGAVTMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDG 486
               +      AV + + +LT      + +   +S      +K  L+E  +   +S+  D 
Sbjct: 1056 SYYKSDPLCSAVLIHMKELTQHNVTPEDMSAFRSYQ----KKLELSETFRK-NYSL-EDE 1115

Query: 487  GLLFERRLCVPSHSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVAEFVS 546
             + ++ RL VP         L   H+  F  H G T     +  +Y+W  ++  + +++ 
Sbjct: 1116 MIYYQDRLVVPIKQQNAVMRLYHDHTL-FGGHFGVTVTLAKISPIYYWPKLQHSIIQYIR 1175

Query: 547  KCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMGFIAGLPRTLRGFTVIWVVVDRLTKS 576
             C+ CQ +K+ R +  GLLQPL + E +W ++SM F+ GLP T     +I VVVDR +K 
Sbjct: 1176 TCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKR 1235

[Close]

BLAST of Cmc11g0289151 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.1e-80
Identity = 188/660 (28.48%), Postives = 319/660 (48.33%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDMGFIRPSVPPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S      PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I+ L  ++ G+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPVVFMDLMNRVFRQFLDTFVIVFIDDILIYSKTEAEHEEHLHMALQTLRDNKLYAKFS 180
             AP  F   +N +  +  ++ V+ ++DDILI+SK+E+EH +H+   LQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAITSWPRPSTISEVRSFLGLAGY-------- 240
            KCEF   QV F+G+ +S+   +     I+ +  W +P    E+R FLG   Y        
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  --VLMQQGK-----VVAYASRQLKSHEQNYPTHNLELAAVVFALKIWRHYLYG--EKIQI 360
              VL Q+        V Y S ++   + NY   + E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTNHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHRGKGNVVADALSRKVSHSAAL 420
             T+H++L    T +    N R  RW   ++D++ EI Y  G  N +ADALSR       +
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421  ITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAEAG 480
            +    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Sbjct: 840  VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481  QAVEFSISSDGGLLFERR--LCVPSHSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 540
            + VE +I    GLL   +  + +P+ + +   ++ + H     +HPG   +   + R + 
Sbjct: 900  KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 959

Query: 541  WCNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMGFIAGLPRTLRGF 580
            W  +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SM FI  LP +  G+
Sbjct: 960  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGY 1019

[Close]

BLAST of Cmc11g0289151 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.1e-80
Identity = 188/660 (28.48%), Postives = 319/660 (48.33%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDMGFIRPSVPPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S      PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I+ L  ++ G+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPVVFMDLMNRVFRQFLDTFVIVFIDDILIYSKTEAEHEEHLHMALQTLRDNKLYAKFS 180
             AP  F   +N +  +  ++ V+ ++DDILI+SK+E+EH +H+   LQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAITSWPRPSTISEVRSFLGLAGY-------- 240
            KCEF   QV F+G+ +S+   +     I+ +  W +P    E+R FLG   Y        
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  --VLMQQGK-----VVAYASRQLKSHEQNYPTHNLELAAVVFALKIWRHYLYG--EKIQI 360
              VL Q+        V Y S ++   + NY   + E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTNHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHRGKGNVVADALSRKVSHSAAL 420
             T+H++L    T +    N R  RW   ++D++ EI Y  G  N +ADALSR       +
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421  ITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAEAG 480
            +    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Sbjct: 840  VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481  QAVEFSISSDGGLLFERR--LCVPSHSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 540
            + VE +I    GLL   +  + +P+ + +   ++ + H     +HPG   +   + R + 
Sbjct: 900  KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 959

Query: 541  WCNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMGFIAGLPRTLRGF 580
            W  +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SM FI  LP +  G+
Sbjct: 960  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGY 1019

[Close]

BLAST of Cmc11g0289151 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.1e-80
Identity = 188/660 (28.48%), Postives = 319/660 (48.33%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDMGFIRPSVPPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S      PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I+ L  ++ G+T+F+K+DL+S YH +R++ GD  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPVVFMDLMNRVFRQFLDTFVIVFIDDILIYSKTEAEHEEHLHMALQTLRDNKLYAKFS 180
             AP  F   +N +  +  ++ V+ ++DDILI+SK+E+EH +H+   LQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAITSWPRPSTISEVRSFLGLAGY-------- 240
            KCEF   QV F+G+ +S+   +     I+ +  W +P    E+R FLG   Y        
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  --VLMQQGK-----VVAYASRQLKSHEQNYPTHNLELAAVVFALKIWRHYLYG--EKIQI 360
              VL Q+        V Y S ++   + NY   + E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTNHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHRGKGNVVADALSRKVSHSAAL 420
             T+H++L    T +    N R  RW   ++D++ EI Y  G  N +ADALSR       +
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421  ITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAEAG 480
            +    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Sbjct: 840  VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481  QAVEFSISSDGGLLFERR--LCVPSHSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 540
            + VE +I    GLL   +  + +P+ + +   ++ + H     +HPG   +   + R + 
Sbjct: 900  KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 959

Query: 541  WCNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMGFIAGLPRTLRGF 580
            W  +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SM FI  LP +  G+
Sbjct: 960  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGY 1019

[Close]

BLAST of Cmc11g0289151 vs. ExPASy TrEMBL
Match: A0A5D3BYT1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold527G00450 PE=4 SV=1)

HSP 1 Score: 1077.0 bits (2784), Expect = 0.0e+00
Identity = 542/599 (90.48%), Postives = 553/599 (92.32%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDMGFIRPSVPPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAP ELKELKVQLQELLD GFIRPSV PWGAPVLFVKKKDGSM LCIDYRELNKVTVKNR
Sbjct: 681  MAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMHLCIDYRELNKVTVKNR 740

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL GATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 741  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 800

Query: 121  NAPVVFMDLMNRVFRQFLDTFVIVFIDDILIYSKTEAEHEEHLHMALQTLRDNKLYAKFS 180
            NAP VFMDLMNRVFR+FLDTFVIVFIDDILIYSKTEAEHEEHL M LQTLRDNKLYAKFS
Sbjct: 801  NAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 860

Query: 181  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAITSWPRPSTISEVRSFLGL----------- 240
            KCEFWLKQVSFLGHVVSKA VSVDPAKIEA+TSWPRPS +SEVRSFLG            
Sbjct: 861  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSIVSEVRSFLGKEFLSFGARHFC 920

Query: 241  --------AGYVLMQQGKVVAYASRQLKSHEQNYPTHNLELAAVVFALKIWRHYLYGEKI 300
                     G VLM+QGKVVAYASRQLKSHEQNYPTH+LELAAVVFALKIWRHYLYGEKI
Sbjct: 921  DSDASKKGLGCVLMKQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI 980

Query: 301  QIFTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHRGKGNVVADALSRKVSHSAAL 360
            QIFT+HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GK NVVADALS+KVSHSAAL
Sbjct: 981  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSKKVSHSAAL 1040

Query: 361  ITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAEAG 420
            ITRQ PLHRDLERAEIAVSVGAVTMQLAQLTVQ TLRQ+IIDAQSNDPYLVEKRGLAEAG
Sbjct: 1041 ITRQTPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG 1100

Query: 421  QAVEFSISSDGGLLFERRLCVPSHSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWC 480
            QAVEF ISSDGG LFERRLCVPS S VKTELLSEAHSSPFSMHPGSTK+YQDLKRVYWW 
Sbjct: 1101 QAVEFFISSDGGHLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKIYQDLKRVYWWR 1160

Query: 481  NMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMGFIAGLPRTLRGFTV 540
            NMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSM FI GLPRT RGFTV
Sbjct: 1161 NMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMDFITGLPRTQRGFTV 1220

Query: 541  IWVVVDRLTKSVHFVLGKSTYTASKWAQLYMSKIVRLHGVPVSIVSDRDARFTSKFWKG 581
            IWVVVDRLTK VHFV GKST+TASKWAQLYMS+IVRLHGVPVSIVSDRDARFTSKFWKG
Sbjct: 1221 IWVVVDRLTKLVHFVPGKSTFTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKG 1279

[Close]

BLAST of Cmc11g0289151 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 1075.8 bits (2781), Expect = 0.0e+00
Identity = 550/650 (84.62%), Postives = 559/650 (86.00%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDMGFIRPSVPPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLD GFIRPSV PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL GATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPVVFMDLMNRVFRQFLDTFVIVFIDDILIYSKTEAEHEEHLHMALQTLRDNKLYAKFS 180
            NAP VFMDLMNRVFR+FLDTFVIVFIDDILIYSKTEAEHEEHL M LQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAITSWPRPSTISEVRSFLGLAGY-------- 240
            KCEFWLKQVSFLGHVVSKA VSVDPAKIEA+T W RPST+SEVRSFLGLAGY        
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  --VLMQQGKVVAYASRQLKSHEQNYPTHNLELAAVVFALKIWRHYLYGEKIQIFTNHKSL 360
              VLMQQGKVVAYASRQLKSHEQNYPTH+LELAAVVFALKIWRHYLYGEKIQIFT+HKSL
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1193

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHRGKGNVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYH GK NVVADALSRKVSHSAALITRQAPLHR
Sbjct: 1194 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1253

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 480
            DLERAEIAVSVGAVTMQLAQLTVQ TLRQ+IIDAQSNDPYLVEKRGLAEAGQ  EFS+SS
Sbjct: 1254 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 1313

Query: 481  DGGLLFERRLCVPSHSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVAEF 540
            DGGLLFERRLCVPS SAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWW NMKREVAEF
Sbjct: 1314 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1373

Query: 541  VSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMGFIAGLPRTLRGFTVIWVVVDRLT 581
            VSKCLVCQQVKAPRQKPAGLLQPLS+PEWKWENVSM FI GLPRTLRGFTVIWVVVDRLT
Sbjct: 1374 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1433

[Close]

BLAST of Cmc11g0289151 vs. ExPASy TrEMBL
Match: A0A5A7UP94 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE=4 SV=1)

HSP 1 Score: 1073.9 bits (2776), Expect = 2.2e-310
Identity = 549/650 (84.46%), Postives = 560/650 (86.15%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDMGFIRPSVPPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLD GFIRPSV PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 98  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 157

Query: 61  YPLPRIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQL GATVFSKIDLRSG HQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 158 YPLPRIDDLFDQLQGATVFSKIDLRSGCHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 217

Query: 121 NAPVVFMDLMNRVFRQFLDTFVIVFIDDILIYSKTEAEHEEHLHMALQTLRDNKLYAKFS 180
           NAP VFMDLMNRVFR+FLDTFVIVFIDDILIYSKTEAEHEEHL M LQTLRDNKLYAKFS
Sbjct: 218 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 277

Query: 181 KCEFWLKQVSFLGHVVSKARVSVDPAKIEAITSWPRPSTISEVRSFLGLAGY-------- 240
           KCEFWLKQVSFLGHVVSKA VSVDPAKIEA+T W RPST+SEVRSFLGLAGY        
Sbjct: 278 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 337

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 338 SRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 397

Query: 301 --VLMQQGKVVAYASRQLKSHEQNYPTHNLELAAVVFALKIWRHYLYGEKIQIFTNHKSL 360
             VLMQQGKVVAYASRQLKSHEQNYPTH+LELAAVVFALKIWRHYLYGEKIQIFT+HKSL
Sbjct: 398 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 457

Query: 361 KYFFTQKELNMRQRRWLELVKDYDCEILYHRGKGNVVADALSRKVSHSAALITRQAPLHR 420
           KYFFTQKELNMRQRRWLELVKDYDCEILYH GK NVVADALSRKVSHSAALITRQAPLHR
Sbjct: 458 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 517

Query: 421 DLERAEIAVSVGAVTMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 480
           DLERAEIAVSVGAVTMQLAQLTVQ TLRQ+IIDAQSNDPYLVEKRGLAEAGQAVEFS+SS
Sbjct: 518 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 577

Query: 481 DGGLLFERRLCVPSHSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVAEF 540
           DGGLLFERRLCVPS SAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWW NMKREVAEF
Sbjct: 578 DGGLLFERRLCVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEF 637

Query: 541 VSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMGFIAGLPRTLRGFTVIWVVVDRLT 581
           VSKCLVCQQVKAPRQKPAGLLQPLS+PEWKWENVSM FIAGLPRTLRGFTVIWVVVDRLT
Sbjct: 638 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPRTLRGFTVIWVVVDRLT 697

[Close]

BLAST of Cmc11g0289151 vs. ExPASy TrEMBL
Match: A0A5A7T8B6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4066G00070 PE=4 SV=1)

HSP 1 Score: 1071.6 bits (2770), Expect = 1.1e-309
Identity = 542/625 (86.72%), Postives = 557/625 (89.12%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDMGFIRPSVPPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLD GFIRPS+ PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 442  MAPAELKELKVQLQELLDKGFIRPSLSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 501

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL GATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSF LT
Sbjct: 502  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFCLT 561

Query: 121  NAPVVFMDLMNRVFRQFLDTFVIVFIDDILIYSKTEAEHEEHLHMALQTLRDNKLYAKFS 180
            NAP VFMDLMNRVFR+FLDTFVIVFIDDILIYSKTEAEHEEHL + LQTLRDNKLYAKFS
Sbjct: 562  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 621

Query: 181  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAITSWPRPSTISEVRSFLGLAGY-------- 240
            KCEFWLKQVSFLGHVVSKA VSVDPAKIEA+T W RPST+SEVRSFLGLAGY        
Sbjct: 622  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRKACED 681

Query: 241  -------------------------------------VLMQQGKVVAYASRQLKSHEQNY 300
                                                 VLMQQGKVVAYASRQLKSHEQNY
Sbjct: 682  SFENLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNY 741

Query: 301  PTHNLELAAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDYDC 360
            PTH+LELAA+VFALKIWRHYLYGEKIQIFT HKSLKYFFTQKELNMRQRRWLELVKDYDC
Sbjct: 742  PTHDLELAAMVFALKIWRHYLYGEKIQIFTIHKSLKYFFTQKELNMRQRRWLELVKDYDC 801

Query: 361  EILYHRGKGNVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQL 420
            EILYH GK NVVADALSRKVSHSAALITRQA LHRDLERAEIAVSVGAVTMQLAQLT+Q 
Sbjct: 802  EILYHPGKANVVADALSRKVSHSAALITRQAHLHRDLERAEIAVSVGAVTMQLAQLTIQP 861

Query: 421  TLRQKIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSHSAVKTELLSE 480
            TLRQ+ IDAQ NDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPS SAVKTELLSE
Sbjct: 862  TLRQRTIDAQGNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSE 921

Query: 481  AHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLS 540
            AHSSPFSMHPGSTKMYQDLKRVYWW NMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLS
Sbjct: 922  AHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLS 981

Query: 541  VPEWKWENVSMGFIAGLPRTLRGFTVIWVVVDRLTKSVHFVLGKSTYTASKWAQLYMSKI 581
            +P+WKWENVSM FI GLPRTLRGFTVIWVVVDRLTKS HFV GKSTYTASKWAQLYMS+I
Sbjct: 982  IPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEI 1041

[Close]

BLAST of Cmc11g0289151 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 1071.2 bits (2769), Expect = 1.5e-309
Identity = 547/649 (84.28%), Postives = 559/649 (86.13%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDMGFIRPSVPPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLD GFIRPSV PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 580  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61   YPLPRIDDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQL GATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121  NAPVVFMDLMNRVFRQFLDTFVIVFIDDILIYSKTEAEHEEHLHMALQTLRDNKLYAKFS 180
            NAP VFMDLMNRVFR+FLDTFVIVFIDDILIYSKTEAEHEEHL M LQTLRDNKLYAKFS
Sbjct: 700  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAITSWPRPSTISEVRSFLGLAGY-------- 240
            KCEFWLKQVSFLGHVVSKA VSVDPAKIEA+T W RPST+SEVRSFLGLAGY        
Sbjct: 760  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 820  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301  --VLMQQGKVVAYASRQLKSHEQNYPTHNLELAAVVFALKIWRHYLYGEKIQIFTNHKSL 360
              VLMQQGKVVAYASRQLKSHEQNYPTH+LELAAVVFALKIWRHYLYGEKIQIFT+HKSL
Sbjct: 880  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHRGKGNVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYH GK NVVADALSRKVSHSAALITRQAPLHR
Sbjct: 940  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 999

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQLTLRQKIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 480
            DLERAEIAVSVGAVTMQLAQLTVQ TLRQ+IIDAQSNDPYLVEKRGLAEAGQAVEFS+SS
Sbjct: 1000 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1059

Query: 481  DGGLLFERRLCVPSHSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWCNMKREVAEF 540
            DGGLLFERRLCVPS S VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWW NMKREVAEF
Sbjct: 1060 DGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEF 1119

Query: 541  VSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWENVSMGFIAGLPRTLRGFTVIWVVVDRLT 580
            VS+CLVCQQVKAPRQKPAGLLQPLS+PEWKWENVSM FI GLPRTLRGFTVIWVVVDRLT
Sbjct: 1120 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1179

[Close]

BLAST of Cmc11g0289151 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 78.6 bits (192), Expect = 1.9e-14
Identity = 46/115 (40.00%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 162 HLHMALQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKARVSVDPAKIEAITSWPRPST 221
           HL M LQ    ++ YA   KC F   Q+++LG  H++S   VS DPAK+EA+  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 222 ISEVRSFLGLAGY---VLMQQGKVVAYASRQLKSHEQNYPTHNLELAAVVF-ALK 271
            +E+R FLGL GY    +   GK+V   +  LK +   +     E+AA+ F ALK
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKW----TEMAALAFKALK 113

The following BLAST results are available for this feature:

BLAST of Cmc11g0289151 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK04315.1	0.0e+00	90.48	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK01613.1	0.0e+00	84.62	pol protein [Cucumis melo var. makuwa]	[more]
KAA0057672.1	4.5e-310	84.46	pol protein [Cucumis melo var. makuwa]	[more]
KAA0037817.1	2.3e-309	86.72	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	3.2e-309	84.28	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0289151 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	1.9e-83	31.57	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	2.5e-83	31.42	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P0CT41	1.1e-80	28.48	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.1e-80	28.48	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.1e-80	28.48	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc11g0289151 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BYT1	0.0e+00	90.48	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold52...	[more]
A0A5D3BPI1	0.0e+00	84.62	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7UP94	2.2e-310	84.46	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE...	[more]
A0A5A7T8B6	1.1e-309	86.72	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40...	[more]
A0A5A7U330	1.5e-309	84.28	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]

BLAST of Cmc11g0289151 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.9e-14	40.00	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 491..586 e-value: 9.1E-15 score: 56.4
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 206..336 e-value: 1.3E-7 score: 33.5
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..196 e-value: 6.2E-84 score: 282.5
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 428..482 e-value: 1.2E-16 score: 60.5
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 231..313 e-value: 2.8E-26 score: 91.9
None	No IPR available	GENE3D	1.10.340.70		coord: 391..481 e-value: 1.0E-17 score: 66.1
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..121 e-value: 6.2E-84 score: 282.5
None	No IPR available	PANTHER	PTHR34072	ENZYMATIC POLYPROTEIN-RELATED	coord: 15..232 coord: 240..579
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 231..335 e-value: 7.43083E-49 score: 163.818
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..196 e-value: 2.43425E-92 score: 279.48
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..195 e-value: 1.1E-27 score: 97.0
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 17..196 score: 10.003062
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..319
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 494..579

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0289151.1	Cmc11g0289151.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding