Cmc11g0289101 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0289101
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
LocationCMiso1.1chr11: 3614648 .. 3615805 (-)
RNA-Seq ExpressionCmc11g0289101
SyntenyCmc11g0289101
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGCCTATGCATTGACTACAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGTTGAGGATTAAGGATGGTGATGTACCGAAGACAACATTTCGTTCCAGATACGGACACTATGAGTTCATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGAAACTTTTGTGATTGTGTTTATTGATGATATCTTGATATACTCCAAGACGGAGGCCGAGCATGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTTGAAATGCGAGTTTTGGCTGAAGCAGGTTTCCTTTCTAGGCCATGTGGTTTTTAAGGCTGGAGTTTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGACCCGACCTTCCACAGTCAGTGAGGTTTGTAGCTTTCTGGGTCTAGCAGGTTATTATCGACGATTTGTGGAGAACTTTTCTTGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGATCTCATTTTGTTTGGAGCAAGGCATGTAAGGACAGTTTCCAGAACCTTAAACAGAAGTTAGTTACCGCACTGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCTAAGAAAGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTAGCTTATGCTTCGCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACACGATTTAGAGTTGGCAGTAGTGGTTTTTGCATTGAAAATATTGAGGCATTACTTGTATGGTGAAAGGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGACTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACACAACAGGCCCCATTGCATCGAGATCTTGAGCAGGCTAAGATTTAA

mRNA sequence

ATGCGCCTATGCATTGACTACAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGTTGAGGATTAAGGATGGTGATGTACCGAAGACAACATTTCGTTCCAGATACGGACACTATGAGTTCATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGAAACTTTTGTGATTGTGTTTATTGATGATATCTTGATATACTCCAAGACGGAGGCCGAGCATGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTTGAAATGCGAGTTTTGGCTGAAGCAGGTTTCCTTTCTAGGCCATGTGGTTTTTAAGGCTGGAGTTTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGACCCGACCTTCCACAGTCAGTGAGGTTTGTAGCTTTCTGGGTCTAGCAGGTTATTATCGACGATTTGTGGAGAACTTTTCTTGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGATCTCATTTTGTTTGGAGCAAGGCATGTAAGGACAGTTTCCAGAACCTTAAACAGAAGTTAGTTACCGCACTGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCTAAGAAAGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTAGCTTATGCTTCGCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACACGATTTAGAGTTGGCAGTAGTGGTTTTTGCATTGAAAATATTGAGGCATTACTTGTATGGTGAAAGGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGACTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACACAACAGGCCCCATTGCATCGAGATCTTGAGCAGGCTAAGATTTAA

Coding sequence (CDS)

ATGCGCCTATGCATTGACTACAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGTTGAGGATTAAGGATGGTGATGTACCGAAGACAACATTTCGTTCCAGATACGGACACTATGAGTTCATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGAAACTTTTGTGATTGTGTTTATTGATGATATCTTGATATACTCCAAGACGGAGGCCGAGCATGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTTGAAATGCGAGTTTTGGCTGAAGCAGGTTTCCTTTCTAGGCCATGTGGTTTTTAAGGCTGGAGTTTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGACCCGACCTTCCACAGTCAGTGAGGTTTGTAGCTTTCTGGGTCTAGCAGGTTATTATCGACGATTTGTGGAGAACTTTTCTTGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGATCTCATTTTGTTTGGAGCAAGGCATGTAAGGACAGTTTCCAGAACCTTAAACAGAAGTTAGTTACCGCACTGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCTAAGAAAGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTAGCTTATGCTTCGCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACACGATTTAGAGTTGGCAGTAGTGGTTTTTGCATTGAAAATATTGAGGCATTACTTGTATGGTGAAAGGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGACTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACACAACAGGCCCCATTGCATCGAGATCTTGAGCAGGCTAAGATTTAA

Protein sequence

MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLETFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVFKAGVSVDPAKIEAVTSWTRPSTVSEVCSFLGLAGYYRRFVENFSCIATPLTQLTRKGSHFVWSKACKDSFQNLKQKLVTALVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKILRHYLYGERIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITQQAPLHRDLEQAKI
Homology
[Close]
BLAST of Cmc11g0289101 vs. NCBI nr
Match: KAA0026271.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 738.0 bits (1904), Expect = 4.1e-209
Identity = 367/385 (95.32%), Postives = 375/385 (97.40%), Query Frame = 0 

Query: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
           MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKT 
Sbjct: 191 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 250

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLETFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFL+TFVIVFIDDILIYSKTEAEHEEH
Sbjct: 251 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 310

Query: 121 LRMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVFKAGVSVDPAKIEAVTSWTRPSTVSE 180
           LR+VLQTLRDNKLYAKF KCEFWLKQVSFLGHVV KAGVSVDPAKIEAVT WTRPSTVSE
Sbjct: 311 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 370

Query: 181 VCSFLGLAGYYRRFVENFSCIATPLTQLTRKGSHFVWSKACKDSFQNLKQKLVTALVLTV 240
           V SFLGLAGYYRRFVENFS IATPLTQLTRKG+ FVWSKAC+DSFQNLKQKLVTA VLTV
Sbjct: 371 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 430

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIL 300
           PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKI 
Sbjct: 431 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 490

Query: 301 RHYLYGERIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
           RHYLYGE+IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 491 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 550

Query: 361 RKVSHSAALITQQAPLHRDLEQAKI 386
           RKVSHSAALIT+QAPLHRDLE+A+I
Sbjct: 551 RKVSHSAALITRQAPLHRDLERAEI 575

[Close]
BLAST of Cmc11g0289101 vs. NCBI nr
Match: KAA0037244.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 737.3 bits (1902), Expect = 6.9e-209
Identity = 367/385 (95.32%), Postives = 374/385 (97.14%), Query Frame = 0 

Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 656  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 715

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLETFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFL+TFVIVFIDDILIYSKTE EHEEH
Sbjct: 716  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEH 775

Query: 121  LRMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVFKAGVSVDPAKIEAVTSWTRPSTVSE 180
            LRMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVV KAGVSVDPAKIEAVT WTRPSTVSE
Sbjct: 776  LRMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 835

Query: 181  VCSFLGLAGYYRRFVENFSCIATPLTQLTRKGSHFVWSKACKDSFQNLKQKLVTALVLTV 240
            V SFLGLAGYYRRFVENFS IATPLTQLTRKG+ FVWSKAC+DSFQNLKQKLVTA VLTV
Sbjct: 836  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 895

Query: 241  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIL 300
            PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKI 
Sbjct: 896  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 955

Query: 301  RHYLYGERIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGE+IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 956  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1015

Query: 361  RKVSHSAALITQQAPLHRDLEQAKI 386
            RKVSHSAALIT+QAPLHRDLE+A+I
Sbjct: 1016 RKVSHSAALITRQAPLHRDLERAEI 1040

[Close]
BLAST of Cmc11g0289101 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 736.5 bits (1900), Expect = 1.2e-208
Identity = 367/385 (95.32%), Postives = 374/385 (97.14%), Query Frame = 0 

Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 622  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 681

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLETFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFL+TFVIVFIDDILIYSKTEAEHEEH
Sbjct: 682  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 741

Query: 121  LRMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVFKAGVSVDPAKIEAVTSWTRPSTVSE 180
            LRMVLQTLRDNKLYAKF KCEFWLKQVSFLGHVV KAGVSVDPAKIEAVT WTRPSTVSE
Sbjct: 742  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 801

Query: 181  VCSFLGLAGYYRRFVENFSCIATPLTQLTRKGSHFVWSKACKDSFQNLKQKLVTALVLTV 240
            V SFLGLAGYYRRFVENFS IATPLTQLTRKG+ FVWSKAC+DSFQNLKQKLVTA VLTV
Sbjct: 802  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 861

Query: 241  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIL 300
            PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKI 
Sbjct: 862  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 921

Query: 301  RHYLYGERIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGE+IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 922  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 981

Query: 361  RKVSHSAALITQQAPLHRDLEQAKI 386
            RKVSHSAALIT+QAPLHRDLE+A+I
Sbjct: 982  RKVSHSAALITRQAPLHRDLERAEI 1006

[Close]
BLAST of Cmc11g0289101 vs. NCBI nr
Match: KAA0031931.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 736.5 bits (1900), Expect = 1.2e-208
Identity = 366/385 (95.06%), Postives = 374/385 (97.14%), Query Frame = 0 

Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKT 
Sbjct: 994  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 1053

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLETFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFL+TFVIVFIDDILIYSKTEAEHEEH
Sbjct: 1054 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 1113

Query: 121  LRMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVFKAGVSVDPAKIEAVTSWTRPSTVSE 180
            LR+VLQTLRDNKLYAKF KCEFWLKQVSFLGHVV KAGVSVDPAKIEAVT WTRPSTVSE
Sbjct: 1114 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 1173

Query: 181  VCSFLGLAGYYRRFVENFSCIATPLTQLTRKGSHFVWSKACKDSFQNLKQKLVTALVLTV 240
            V SFLGLAGYYRRFVENFS IA PLTQLTRKG+ FVWSKAC+DSFQNLKQKLVTALVLTV
Sbjct: 1174 VRSFLGLAGYYRRFVENFSRIAAPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTALVLTV 1233

Query: 241  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIL 300
            PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKI 
Sbjct: 1234 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 1293

Query: 301  RHYLYGERIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGE+IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALS
Sbjct: 1294 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALS 1353

Query: 361  RKVSHSAALITQQAPLHRDLEQAKI 386
            RKVSHSAALIT+QAPLHRDLE+A+I
Sbjct: 1354 RKVSHSAALITRQAPLHRDLERAEI 1378

[Close]
BLAST of Cmc11g0289101 vs. NCBI nr
Match: KAA0042119.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 736.1 bits (1899), Expect = 1.5e-208
Identity = 365/385 (94.81%), Postives = 375/385 (97.40%), Query Frame = 0 

Query: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
           MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIK+GDVPKT 
Sbjct: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKNGDVPKTA 60

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLETFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFL+TFVIVFIDDILIYSKTEAEHEEH
Sbjct: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120

Query: 121 LRMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVFKAGVSVDPAKIEAVTSWTRPSTVSE 180
           LRMVLQTLRDNKLYAKF KCEFWLKQVSFLGHVV KAGVSVDPAKIEAVTSWTRPSTVSE
Sbjct: 121 LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSE 180

Query: 181 VCSFLGLAGYYRRFVENFSCIATPLTQLTRKGSHFVWSKACKDSFQNLKQKLVTALVLTV 240
           V SFLGLAGYYRRFVENFS IATPLTQLTRKG+ FVWSKAC+DSFQNLKQKLVTA +LTV
Sbjct: 181 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTV 240

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIL 300
           PDGSGSFVIYSDAS+KGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKI 
Sbjct: 241 PDGSGSFVIYSDASRKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 300

Query: 301 RHYLYGERIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
           RHYLYGE+IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 301 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360

Query: 361 RKVSHSAALITQQAPLHRDLEQAKI 386
           RK SHSAALIT+QAPLHRDLE+A+I
Sbjct: 361 RKASHSAALITRQAPLHRDLERAEI 385

[Close]
BLAST of Cmc11g0289101 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 8.5e-77
Identity = 145/361 (40.17%), Postives = 217/361 (60.11%), Query Frame = 0 

Query: 2   RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTF 61
           R+ IDYR+LN++TV +R+P+P +D++  +L     F+ IDL  G+HQ+ +    V KT F
Sbjct: 263 RIVIDYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAF 322

Query: 62  RSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLETFVIVFIDDILIYSKTEAEHEEHL 121
            +++GHYE++ M FGL NAPA F   MN + R  L    +V++DDI+++S +  EH + L
Sbjct: 323 STKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSL 382

Query: 122 RMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVFKAGVSVDPAKIEAVTSWTRPSTVSEV 181
            +V + L    L  +  KCEF  ++ +FLGHV+   G+  +P KIEA+  +  P+   E+
Sbjct: 383 GLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEI 442

Query: 182 CSFLGLAGYYRRFVENFSCIATPLTQLTRKGSHFVWSKACKDS-FQNLKQKLVTALVLTV 241
            +FLGL GYYR+F+ NF+ IA P+T+  +K      +    DS F+ LK  +    +L V
Sbjct: 443 KAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKV 502

Query: 242 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIL 301
           PD +  F + +DAS   LG VL Q G  ++Y SR L  HE NY T + EL  +V+A K  
Sbjct: 503 PDFTKKFTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTF 562

Query: 302 RHYLYGERIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 361
           RHYL G   +I +DH+ L + +  K+ N +  RW   + ++D +I Y  GK N VADALS
Sbjct: 563 RHYLLGRHFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALS 622

[Close]
BLAST of Cmc11g0289101 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.2e-76
Identity = 141/361 (39.06%), Postives = 216/361 (59.83%), Query Frame = 0 

Query: 2   RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTF 61
           R+ IDYR+LN++T+ +RYP+P +D++  +L     F+ IDL  G+HQ+ + +  + KT F
Sbjct: 262 RVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAF 321

Query: 62  RSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLETFVIVFIDDILIYSKTEAEHEEHL 121
            ++ GHYE++ M FGL NAPA F   MN + R  L    +V++DDI+I+S +  EH   +
Sbjct: 322 STKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSI 381

Query: 122 RMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVFKAGVSVDPAKIEAVTSWTRPSTVSEV 181
           ++V   L D  L  +  KCEF  K+ +FLGH+V   G+  +P K++A+ S+  P+   E+
Sbjct: 382 QLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEI 441

Query: 182 CSFLGLAGYYRRFVENFSCIATPLTQLTRKGSHFVWSK-ACKDSFQNLKQKLVTALVLTV 241
            +FLGL GYYR+F+ N++ IA P+T   +K +     K    ++F+ LK  ++   +L +
Sbjct: 442 RAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQL 501

Query: 242 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIL 301
           PD    FV+ +DAS   LG VL Q G  +++ SR L  HE NY   + EL  +V+A K  
Sbjct: 502 PDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTF 561

Query: 302 RHYLYGERIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 361
           RHYL G +  I +DH+ L++    KE   +  RW   + +Y  +I Y  GK N VADALS
Sbjct: 562 RHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALS 621

[Close]
BLAST of Cmc11g0289101 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.3e-72
Identity = 140/376 (37.23%), Postives = 224/376 (59.57%), Query Frame = 0 

Query: 2   RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTF 61
           R+ +D++ LN VT+ + YP+P I+     L  A  F+ +DL SG+HQ+ +K+ D+PKT F
Sbjct: 179 RMVVDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAF 238

Query: 62  RSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLETFVIVFIDDILIYSKTEAEHEEHL 121
            +  G YEF+ + FGL NAPA+F  +++ + RE +     V+IDDI+++S+    H ++L
Sbjct: 239 STLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNL 298

Query: 122 RMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVFKAGVSVDPAKIEAVTSWTRPSTVSEV 181
           R+VL +L    L     K  F   QV FLG++V   G+  DP K+ A++    P++V E+
Sbjct: 299 RLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKEL 358

Query: 182 CSFLGLAGYYRRFVENFSCIATPLTQLTR------KGSH-----FVWSKACKDSFQNLKQ 241
             FLG+  YYR+F+++++ +A PLT LTR      K S          +    SF +LK 
Sbjct: 359 KRFLGMTSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKS 418

Query: 242 KLVTALVLTVPDGSGSFVIYSDASKKGLGCVLMQ----QGKVVAYASRQLKSHEQNYPTH 301
            L ++ +L  P  +  F + +DAS   +G VL Q    + + +AY SR L   E+NY T 
Sbjct: 419 ILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATI 478

Query: 302 DLELAVVVFALKILRHYLYGE-RIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 361
           + E+  ++++L  LR YLYG   I+++TDH+ L +    +  N + +RW   +++Y+CE+
Sbjct: 479 EKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCEL 538

[Close]
BLAST of Cmc11g0289101 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.4e-71
Identity = 141/374 (37.70%), Postives = 223/374 (59.63%), Query Frame = 0 

Query: 2   RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTF 61
           RL ID+R+LN+ T+ +RYP+P I  +   L  A  F+ +DL+SGYHQ+ + + D  KT+F
Sbjct: 238 RLVIDFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSF 297

Query: 62  RSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLETFVIVFIDDILIYSKTEAEHEEHL 121
               G YEF  + FGL NA ++F   ++ V RE +     V++DD++I+S+ E++H  H+
Sbjct: 298 SVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKICYVYVDDVIIFSENESDHVRHI 357

Query: 122 RMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVFKAGVSVDPAKIEAVTSWTRPSTVSEV 181
             VL+ L D  +     K  F+ + V +LG +V K G   DP K++A+  +  P  V +V
Sbjct: 358 DTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKV 417

Query: 182 CSFLGLAGYYRRFVENFSCIATPLTQLTRKGSHFV-----------WSKACKDSFQNLKQ 241
            SFLGLA YYR F+++F+ IA P+T + +  +  V           +++  +++FQ L+ 
Sbjct: 418 RSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRN 477

Query: 242 KLVTA-LVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLE 301
            L +  ++L  PD    F + +DAS  G+G VL Q+G+ +   SR LK  EQNY T++ E
Sbjct: 478 ILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITMISRTLKQPEQNYATNERE 537

Query: 302 LAVVVFALKILRHYLYGER-IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH 361
           L  +V+AL  L+++LYG R I IFTDH+ L +    +  N + +RW   +  ++ ++ Y 
Sbjct: 538 LLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIKRWKSYIDQHNAKVFYK 597

Query: 362 PGKANVVADALSRK 363
           PGK N VADALSR+
Sbjct: 598 PGKENFVADALSRQ 611

[Close]
BLAST of Cmc11g0289101 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 4.7e-67
Identity = 142/394 (36.04%), Postives = 221/394 (56.09%), Query Frame = 0 

Query: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
           +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K  
Sbjct: 462 LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLETFVIVFIDDILIYSKTEAEHEEH 120
           FR   G +E++VM +G++ APA F   +N +  E  E+ V+ ++DDILI+SK+E+EH +H
Sbjct: 522 FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121 LRMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVFKAGVSVDPAKIEAVTSWTRPSTVSE 180
           ++ VLQ L++  L     KCEF   QV F+G+ + + G +     I+ V  W +P    E
Sbjct: 582 VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181 VCSFLGLAGYYRRFVENFSCIATPLTQLTRKGSHFVWSKACKDSFQNLKQKLVTALVLTV 240
           +  FLG   Y R+F+   S +  PL  L +K   + W+     + +N+KQ LV+  VL  
Sbjct: 642 LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAVVVF 300
            D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+  ++ 
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301 ALKILRHYLYG--ERIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
           +LK  RHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762 SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361 ANVVADALSRKVSHSAALITQQAPLHRDLEQAKI 386
           AN +ADALSR       ++ +  P+ +D E   I
Sbjct: 822 ANHIADALSR-------IVDETEPIPKDSEDNSI 848

[Close]
BLAST of Cmc11g0289101 vs. ExPASy TrEMBL
Match: A0A5A7SPZ2 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002730 PE=4 SV=1)

HSP 1 Score: 738.0 bits (1904), Expect = 2.0e-209
Identity = 367/385 (95.32%), Postives = 375/385 (97.40%), Query Frame = 0 

Query: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
           MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKT 
Sbjct: 191 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 250

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLETFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFL+TFVIVFIDDILIYSKTEAEHEEH
Sbjct: 251 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 310

Query: 121 LRMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVFKAGVSVDPAKIEAVTSWTRPSTVSE 180
           LR+VLQTLRDNKLYAKF KCEFWLKQVSFLGHVV KAGVSVDPAKIEAVT WTRPSTVSE
Sbjct: 311 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 370

Query: 181 VCSFLGLAGYYRRFVENFSCIATPLTQLTRKGSHFVWSKACKDSFQNLKQKLVTALVLTV 240
           V SFLGLAGYYRRFVENFS IATPLTQLTRKG+ FVWSKAC+DSFQNLKQKLVTA VLTV
Sbjct: 371 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 430

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIL 300
           PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKI 
Sbjct: 431 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 490

Query: 301 RHYLYGERIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
           RHYLYGE+IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 491 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 550

Query: 361 RKVSHSAALITQQAPLHRDLEQAKI 386
           RKVSHSAALIT+QAPLHRDLE+A+I
Sbjct: 551 RKVSHSAALITRQAPLHRDLERAEI 575

[Close]
BLAST of Cmc11g0289101 vs. ExPASy TrEMBL
Match: A0A5A7T190 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001700 PE=4 SV=1)

HSP 1 Score: 737.3 bits (1902), Expect = 3.4e-209
Identity = 367/385 (95.32%), Postives = 374/385 (97.14%), Query Frame = 0 

Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 656  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 715

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLETFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFL+TFVIVFIDDILIYSKTE EHEEH
Sbjct: 716  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEH 775

Query: 121  LRMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVFKAGVSVDPAKIEAVTSWTRPSTVSE 180
            LRMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVV KAGVSVDPAKIEAVT WTRPSTVSE
Sbjct: 776  LRMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 835

Query: 181  VCSFLGLAGYYRRFVENFSCIATPLTQLTRKGSHFVWSKACKDSFQNLKQKLVTALVLTV 240
            V SFLGLAGYYRRFVENFS IATPLTQLTRKG+ FVWSKAC+DSFQNLKQKLVTA VLTV
Sbjct: 836  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 895

Query: 241  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIL 300
            PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKI 
Sbjct: 896  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 955

Query: 301  RHYLYGERIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGE+IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 956  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1015

Query: 361  RKVSHSAALITQQAPLHRDLEQAKI 386
            RKVSHSAALIT+QAPLHRDLE+A+I
Sbjct: 1016 RKVSHSAALITRQAPLHRDLERAEI 1040

[Close]
BLAST of Cmc11g0289101 vs. ExPASy TrEMBL
Match: A0A5A7SQU8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G00040 PE=4 SV=1)

HSP 1 Score: 736.5 bits (1900), Expect = 5.7e-209
Identity = 366/385 (95.06%), Postives = 374/385 (97.14%), Query Frame = 0 

Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKT 
Sbjct: 994  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 1053

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLETFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFL+TFVIVFIDDILIYSKTEAEHEEH
Sbjct: 1054 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 1113

Query: 121  LRMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVFKAGVSVDPAKIEAVTSWTRPSTVSE 180
            LR+VLQTLRDNKLYAKF KCEFWLKQVSFLGHVV KAGVSVDPAKIEAVT WTRPSTVSE
Sbjct: 1114 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 1173

Query: 181  VCSFLGLAGYYRRFVENFSCIATPLTQLTRKGSHFVWSKACKDSFQNLKQKLVTALVLTV 240
            V SFLGLAGYYRRFVENFS IA PLTQLTRKG+ FVWSKAC+DSFQNLKQKLVTALVLTV
Sbjct: 1174 VRSFLGLAGYYRRFVENFSRIAAPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTALVLTV 1233

Query: 241  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIL 300
            PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKI 
Sbjct: 1234 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 1293

Query: 301  RHYLYGERIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGE+IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALS
Sbjct: 1294 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPSKANVVADALS 1353

Query: 361  RKVSHSAALITQQAPLHRDLEQAKI 386
            RKVSHSAALIT+QAPLHRDLE+A+I
Sbjct: 1354 RKVSHSAALITRQAPLHRDLERAEI 1378

[Close]
BLAST of Cmc11g0289101 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 736.5 bits (1900), Expect = 5.7e-209
Identity = 367/385 (95.32%), Postives = 374/385 (97.14%), Query Frame = 0 

Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 622  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 681

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLETFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFL+TFVIVFIDDILIYSKTEAEHEEH
Sbjct: 682  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 741

Query: 121  LRMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVFKAGVSVDPAKIEAVTSWTRPSTVSE 180
            LRMVLQTLRDNKLYAKF KCEFWLKQVSFLGHVV KAGVSVDPAKIEAVT WTRPSTVSE
Sbjct: 742  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 801

Query: 181  VCSFLGLAGYYRRFVENFSCIATPLTQLTRKGSHFVWSKACKDSFQNLKQKLVTALVLTV 240
            V SFLGLAGYYRRFVENFS IATPLTQLTRKG+ FVWSKAC+DSFQNLKQKLVTA VLTV
Sbjct: 802  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 861

Query: 241  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIL 300
            PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKI 
Sbjct: 862  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 921

Query: 301  RHYLYGERIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGE+IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 922  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 981

Query: 361  RKVSHSAALITQQAPLHRDLEQAKI 386
            RKVSHSAALIT+QAPLHRDLE+A+I
Sbjct: 982  RKVSHSAALITRQAPLHRDLERAEI 1006

[Close]
BLAST of Cmc11g0289101 vs. ExPASy TrEMBL
Match: A0A5A7TLA3 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G005990 PE=4 SV=1)

HSP 1 Score: 736.1 bits (1899), Expect = 7.5e-209
Identity = 365/385 (94.81%), Postives = 375/385 (97.40%), Query Frame = 0 

Query: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
           MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIK+GDVPKT 
Sbjct: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKNGDVPKTA 60

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLETFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFL+TFVIVFIDDILIYSKTEAEHEEH
Sbjct: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120

Query: 121 LRMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVFKAGVSVDPAKIEAVTSWTRPSTVSE 180
           LRMVLQTLRDNKLYAKF KCEFWLKQVSFLGHVV KAGVSVDPAKIEAVTSWTRPSTVSE
Sbjct: 121 LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSE 180

Query: 181 VCSFLGLAGYYRRFVENFSCIATPLTQLTRKGSHFVWSKACKDSFQNLKQKLVTALVLTV 240
           V SFLGLAGYYRRFVENFS IATPLTQLTRKG+ FVWSKAC+DSFQNLKQKLVTA +LTV
Sbjct: 181 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTV 240

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIL 300
           PDGSGSFVIYSDAS+KGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKI 
Sbjct: 241 PDGSGSFVIYSDASRKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 300

Query: 301 RHYLYGERIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
           RHYLYGE+IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 301 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360

Query: 361 RKVSHSAALITQQAPLHRDLEQAKI 386
           RK SHSAALIT+QAPLHRDLE+A+I
Sbjct: 361 RKASHSAALITRQAPLHRDLERAEI 385

[Close]
BLAST of Cmc11g0289101 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-23
Identity = 57/131 (43.51%), Postives = 78/131 (59.54%), Query Frame = 0 

Query: 120 HLRMVLQTLRDNKLYAKFLKCEFWLKQVSFLG--HVVFKAGVSVDPAKIEAVTSWTRPST 179
           HL MVLQ    ++ YA   KC F   Q+++LG  H++   GVS DPAK+EA+  W  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 180 VSEVCSFLGLAGYYRRFVENFSCIATPLTQLTRKGSHFVWSKACKDSFQNLKQKLVTALV 239
            +E+  FLGL GYYRRFV+N+  I  PLT+L +K S   W++    +F+ LK  + T  V
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 240 LTVPDGSGSFV 249
           L +PD    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:
BLAST of Cmc11g0289101 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0026271.14.1e-20995.32pol protein [Cucumis melo var. makuwa][more]
KAA0037244.16.9e-20995.32reverse transcriptase [Cucumis melo var. makuwa][more]
KAA0048687.11.2e-20895.32pol protein [Cucumis melo var. makuwa][more]
KAA0031931.11.2e-20895.06pol protein [Cucumis melo var. makuwa][more]
KAA0042119.11.5e-20894.81pol protein [Cucumis melo var. makuwa][more]
BLAST of Cmc11g0289101 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P043238.5e-7740.17Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
P208253.2e-7639.06Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... [more]
Q8I7P91.3e-7237.23Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... [more]
P104012.4e-7137.70Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas... [more]
P0CT414.7e-6736.04Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
BLAST of Cmc11g0289101 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SPZ22.0e-20995.32Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002730 PE... [more]
A0A5A7T1903.4e-20995.32Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37... [more]
A0A5A7SQU85.7e-20995.06Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13... [more]
A0A5A7U3305.7e-20995.32Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43... [more]
A0A5A7TLA37.5e-20994.81Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G005990 PE... [more]
BLAST of Cmc11g0289101 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00860.11.1e-2343.51DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 3..153
e-value: 2.6E-25
score: 89.2
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..154
score: 10.597533
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 245..341
e-value: 3.9E-32
score: 110.7
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 1..79
e-value: 3.4E-67
score: 227.8
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 2..347
NoneNo IPR availablePANTHERPTHR24559:SF324TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEINcoord: 2..347
NoneNo IPR availableCDDcd01647RT_LTRcoord: 2..154
e-value: 2.02823E-81
score: 245.197
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 248..363
e-value: 5.25484E-57
score: 180.381
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 164..254
e-value: 1.3E-28
score: 100.8
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 19..154
e-value: 3.4E-67
score: 227.8
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1..347

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0289101.1Cmc11g0289101.1mRNA