Cmc11g0286131 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0286131
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	B3 domain-containing transcription factor VRN1-like
Location	CMiso1.1chr11: 1399714 .. 1400244 (-)
RNA-Seq Expression	Cmc11g0286131
Synteny	Cmc11g0286131

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAAATAAAGGGAAGATTTGGAGTAAGAGATCATCAACCATTTTTGCAAAAGCTTCAAAGTTCAAAGAAATAACTACAAATCCTTCTTTCATGGTCACTATGGGACGTTCATACCTTCATACAAGTAATTTGGTAAGTTATCTTTCAAAACTTTTGTTTGCCTGTAAAAATTCAATATAAATAAGGTTAGGTTAAAATTACTCCAAAACATGTTTTTAATTGCGAGTATTGAAATTTTCCTTGAATGTTTTGCAGAATATTCCAACAGGGTTTGCAAGTACGTATTTGAAGGAGACCAAAGACTTGATTCTTTATGTTTCATCAGATGATCAAAAGGTTTGGAAGATTTTGTGCGTTGAACGTTGGTTGTATGCTAGATCATGTCAAAGGTTTGAAATGGCTAAGGGTTGGAGGGAATTTGCTAGAGATAATAGCTTGAAAGAAGGTGATATTTGTGTATTTGAGTTGATGAAAAACATTCAAAAAATGTCATTATTTAAAACTACCATTTTTCGATTTGGTTCGTGA

mRNA sequence

ATGATAAATAAAGGGAAGATTTGGAGTAAGAGATCATCAACCATTTTTGCAAAAGCTTCAAAGTTCAAAGAAATAACTACAAATCCTTCTTTCATGGTCACTATGGGACGTTCATACCTTCATACAAGTAATTTGAATATTCCAACAGGGTTTGCAAGTACGTATTTGAAGGAGACCAAAGACTTGATTCTTTATGTTTCATCAGATGATCAAAAGGTTTGGAAGATTTTGTGCGTTGAACGTTGGTTGTATGCTAGATCATGTCAAAGGTTTGAAATGGCTAAGGGTTGGAGGGAATTTGCTAGAGATAATAGCTTGAAAGAAGGTGATATTTGTGTATTTGAGTTGATGAAAAACATTCAAAAAATGTCATTATTTAAAACTACCATTTTTCGATTTGGTTCGTGA

Coding sequence (CDS)

ATGATAAATAAAGGGAAGATTTGGAGTAAGAGATCATCAACCATTTTTGCAAAAGCTTCAAAGTTCAAAGAAATAACTACAAATCCTTCTTTCATGGTCACTATGGGACGTTCATACCTTCATACAAGTAATTTGAATATTCCAACAGGGTTTGCAAGTACGTATTTGAAGGAGACCAAAGACTTGATTCTTTATGTTTCATCAGATGATCAAAAGGTTTGGAAGATTTTGTGCGTTGAACGTTGGTTGTATGCTAGATCATGTCAAAGGTTTGAAATGGCTAAGGGTTGGAGGGAATTTGCTAGAGATAATAGCTTGAAAGAAGGTGATATTTGTGTATTTGAGTTGATGAAAAACATTCAAAAAATGTCATTATTTAAAACTACCATTTTTCGATTTGGTTCGTGA

Protein sequence

MINKGKIWSKRSSTIFAKASKFKEITTNPSFMVTMGRSYLHTSNLNIPTGFASTYLKETKDLILYVSSDDQKVWKILCVERWLYARSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQKMSLFKTTIFRFGS

Homology

[Close]

BLAST of Cmc11g0286131 vs. NCBI nr
Match: XP_016902166.1 (PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo])

HSP 1 Score: 270.0 bits (689), Expect = 1.1e-68
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 2   INKGKIWSKRSSTIFAKASKFKEITTNPSFMVTMGRSYLHTSNLNIPTGFASTYLKETKD 61
           + KGKIWSKRSSTIFAKASKFKEITTNPSFMVTMGRSYLHTSNLNIPTGFASTYLKETKD
Sbjct: 146 LKKGKIWSKRSSTIFAKASKFKEITTNPSFMVTMGRSYLHTSNLNIPTGFASTYLKETKD 205

Query: 62  LILYVSSDDQKVWKILCVERWLYARSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQ 121
           LILYVSSDDQKVWKILCVERWLYARSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQ
Sbjct: 206 LILYVSSDDQKVWKILCVERWLYARSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQ 265

Query: 122 KMSLFKTTIFRFGS 136
           KMSLFKTTIFRFGS
Sbjct: 266 KMSLFKTTIFRFGS 279

[Close]

BLAST of Cmc11g0286131 vs. NCBI nr
Match: KAG7011178.1 (B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 128.3 bits (321), Expect = 5.2e-26
Identity = 71/133 (53.38%), Postives = 92/133 (69.17%), Query Frame = 0


Query: 5   GKIWSKRSSTIFAKASKFKEITTNPSFMVTMGRSYLHT--SNLNIPTGFASTYLKETKDL 64
           GK+  +   +I  +A+KF+ +TTNPSFMVTMG SYLHT  S L+IP  FA+ +++  K++
Sbjct: 145 GKVKKRERFSISEEATKFQSLTTNPSFMVTMGASYLHTGKSYLSIPQWFANAHIESPKEM 204

Query: 65  ILYVSSDDQKVWKILCVERWLYARSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQK 124
            + VS  D +VWKILC ERW      +R EM  GWR+FARDN LK+GDICVFELM+  + 
Sbjct: 205 SVEVS--DGRVWKILCGERW--PHGVKRVEMRGGWRDFARDNGLKKGDICVFELMETSEL 264

Query: 125 MSLFKTTIFRFGS 136
              FK TIFR GS
Sbjct: 265 S--FKATIFRSGS 271

[Close]

BLAST of Cmc11g0286131 vs. NCBI nr
Match: KAG6571413.1 (B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 128.3 bits (321), Expect = 5.2e-26
Identity = 71/133 (53.38%), Postives = 92/133 (69.17%), Query Frame = 0


Query: 5   GKIWSKRSSTIFAKASKFKEITTNPSFMVTMGRSYLHT--SNLNIPTGFASTYLKETKDL 64
           GK+  +   +I  +A+KF+ +TTNPSFMVTMG SYLHT  S L+IP  FA+ +++  K++
Sbjct: 117 GKVKKRERFSISEEATKFQSLTTNPSFMVTMGASYLHTGKSYLSIPQWFANAHIESPKEM 176

Query: 65  ILYVSSDDQKVWKILCVERWLYARSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQK 124
            + VS  D +VWKILC ERW      +R EM  GWR+FARDN LK+GDICVFELM+  + 
Sbjct: 177 SVEVS--DGRVWKILCGERW--PHGVKRVEMRGGWRDFARDNGLKKGDICVFELMETSEL 236

Query: 125 MSLFKTTIFRFGS 136
              FK TIFR GS
Sbjct: 237 S--FKATIFRSGS 243

[Close]

BLAST of Cmc11g0286131 vs. NCBI nr
Match: XP_022928091.1 (B3 domain-containing transcription factor VRN1-like [Cucurbita moschata])

HSP 1 Score: 126.7 bits (317), Expect = 1.5e-25
Identity = 70/132 (53.03%), Postives = 91/132 (68.94%), Query Frame = 0


Query: 5   GKIWSKRSSTIFAKASKFKEITTNPSFMVTMGRSYLHT--SNLNIPTGFASTYLKETKDL 64
           GK+  +   +I  +A+KF+ +TTNPSFMVTMG SYLHT  S L+IP  FA+ +++  K++
Sbjct: 117 GKVKKRERFSISEEATKFQSLTTNPSFMVTMGASYLHTGKSYLSIPQWFANAHMESPKEM 176

Query: 65  ILYVSSDDQKVWKILCVERWLYARSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQK 124
            + VS  D +VWKILC ERW      +R EM  GWR+FARDN LK+GDICVFELM+  + 
Sbjct: 177 SVEVS--DGRVWKILCGERW--PHGVKRVEMRGGWRDFARDNGLKKGDICVFELMETSEL 236

Query: 125 MSLFKTTIFRFG 135
              FK TIFR G
Sbjct: 237 S--FKATIFRSG 242

[Close]

BLAST of Cmc11g0286131 vs. NCBI nr
Match: XP_023513190.1 (B3 domain-containing transcription factor VRN1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 124.4 bits (311), Expect = 7.5e-25
Identity = 69/132 (52.27%), Postives = 90/132 (68.18%), Query Frame = 0


Query: 5   GKIWSKRSSTIFAKASKFKEITTNPSFMVTMGRSYLHT--SNLNIPTGFASTYLKETKDL 64
           GK+  +   +I  +A+KF+ +T NPSFMVTMG SYLHT  S L+IP  FA+ +++  K++
Sbjct: 117 GKVKKRERFSISEEATKFQSLTMNPSFMVTMGASYLHTGKSYLSIPQWFANAHMESPKEM 176

Query: 65  ILYVSSDDQKVWKILCVERWLYARSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQK 124
            + VS  D +VWKILC ERW      +R EM  GWR+FARDN LK+GDICVFELM+  + 
Sbjct: 177 SVEVS--DGRVWKILCGERW--PHGVKRVEMRGGWRDFARDNGLKKGDICVFELMETSEL 236

Query: 125 MSLFKTTIFRFG 135
              FK TIFR G
Sbjct: 237 S--FKATIFRSG 242

[Close]

BLAST of Cmc11g0286131 vs. ExPASy Swiss-Prot
Match: Q8L3W1 (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-08
Identity = 37/107 (34.58%), Postives = 57/107 (53.27%), Query Frame = 0


Query: 27  TNPSFMVTMGRSYLHTS-NLNIPTGFASTYLKETKDLILYVSSDDQKVWKILCVERWLYA 86
           TNP F V +  SYL+    + +P+GFA  YL      I    ++ Q  W + C+ +    
Sbjct: 240 TNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQ--WPVRCLYK---- 299

Query: 87  RSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQKMSLFKTTIFR 133
               R + ++GW EF  +N+L EGD+CVFEL++   +  + K T FR
Sbjct: 300 --AGRAKFSQGWYEFTLENNLGEGDVCVFELLRT--RDFVLKVTAFR 336

[Close]

BLAST of Cmc11g0286131 vs. ExPASy Swiss-Prot
Match: Q9XIB5 (B3 domain-containing protein REM19 OS=Arabidopsis thaliana OX=3702 GN=REM19 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-07
Identity = 35/107 (32.71%), Postives = 56/107 (52.34%), Query Frame = 0


Query: 27  TNPSFMVTMGRSYLHTS-NLNIPTGFASTYLKETKDLILYVSSDDQKVWKILCVERWLYA 86
           TNP F V +  SYL+    + +P+GFA  YL      I     + Q  W + C+ +    
Sbjct: 125 TNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGEKQ--WPVRCLYK---- 184

Query: 87  RSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQKMSLFKTTIFR 133
               R + ++GW EF  +N++ EGD+CVFEL++   +  + + T FR
Sbjct: 185 --AGRAKFSQGWYEFTLENNIGEGDVCVFELLRT--RDFVLEVTAFR 221

[Close]

BLAST of Cmc11g0286131 vs. ExPASy Swiss-Prot
Match: Q2QMT5 (B3 domain-containing protein LOC_Os12g40090 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0591500 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.5e-07
Identity = 29/99 (29.29%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 28  NPSFMVTMGRSYLHTSN-LNIPTGFASTYLKETKDLILYVSSDDQKVWKILCVERWLYAR 87
           NP F+V +  +++   N L +PT FA+ +L+     IL +  + ++ W +    ++ Y  
Sbjct: 224 NPVFVVVLQTAHVRRRNILIVPTRFAADHLERKSHDILLIRPNRKQKWSV----KYYYLS 283

Query: 88  SCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQKMSL 126
           +  R      W +F R+N L+EG++C+FELMK  ++ ++
Sbjct: 284 NTTRGFNCHRWIKFIRENRLREGNVCIFELMKGARRPTM 318

[Close]

BLAST of Cmc11g0286131 vs. ExPASy Swiss-Prot
Match: Q2QMT2 (B3 domain-containing protein Os12g0592300 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0592300 PE=2 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 7.3e-07
Identity = 30/99 (30.30%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 28  NPSFMVTMGRSYLHTSNLNI-PTGFASTYLKETKDLILYVSSDDQKVWKILCVERWLYAR 87
           NP F+  +    +H   L I P+GFA+ +L      IL +  + ++ W +    ++ +A 
Sbjct: 249 NPVFVTVLQAPQIHRKGLLIVPSGFAADHLDSRSQEILLMRPNKKEKWYV----KYYHAS 308

Query: 88  SCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQKMSL 126
           + + F   + W +F R+N L+EG IC+FELMK  +++++
Sbjct: 309 TTRGFNCQR-WIKFIRENRLREGYICIFELMKGARRVTM 342

[Close]

BLAST of Cmc11g0286131 vs. ExPASy Swiss-Prot
Match: Q851W4 (B3 domain-containing protein Os03g0620500 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0620500 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.8e-06
Identity = 34/107 (31.78%), Postives = 52/107 (48.60%), Query Frame = 0


Query: 29  PSFMVTMGRSYLHTSNLNIPT---GFASTYLKETKDLILYVSSDDQKVWKILCVERWLYA 88
           P ++  M +S + T  L I T    FA  YL E +  +  +++   K W++      +  
Sbjct: 439 PIYVSIMNKSNVGTDGLYIITLGRQFAIRYLPEGEQTLTLLTTGTGKAWQVK-----MRP 498

Query: 89  RSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQKMSLFKTTIFR 133
           RS        GWR+F RDN L+  DIC+F+L KN ++    K  I R
Sbjct: 499 RSGDARMFTLGWRDFVRDNRLQTEDICLFQLTKNSERGLAMKVHIIR 540

[Close]

BLAST of Cmc11g0286131 vs. ExPASy TrEMBL
Match: A0A1S4E1R2 (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=LOC107991566 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.3e-69
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 2   INKGKIWSKRSSTIFAKASKFKEITTNPSFMVTMGRSYLHTSNLNIPTGFASTYLKETKD 61
           + KGKIWSKRSSTIFAKASKFKEITTNPSFMVTMGRSYLHTSNLNIPTGFASTYLKETKD
Sbjct: 146 LKKGKIWSKRSSTIFAKASKFKEITTNPSFMVTMGRSYLHTSNLNIPTGFASTYLKETKD 205

Query: 62  LILYVSSDDQKVWKILCVERWLYARSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQ 121
           LILYVSSDDQKVWKILCVERWLYARSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQ
Sbjct: 206 LILYVSSDDQKVWKILCVERWLYARSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQ 265

Query: 122 KMSLFKTTIFRFGS 136
           KMSLFKTTIFRFGS
Sbjct: 266 KMSLFKTTIFRFGS 279

[Close]

BLAST of Cmc11g0286131 vs. ExPASy TrEMBL
Match: A0A6J1EJA7 (B3 domain-containing transcription factor VRN1-like OS=Cucurbita moschata OX=3662 GN=LOC111434979 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 7.3e-26
Identity = 70/132 (53.03%), Postives = 91/132 (68.94%), Query Frame = 0


Query: 5   GKIWSKRSSTIFAKASKFKEITTNPSFMVTMGRSYLHT--SNLNIPTGFASTYLKETKDL 64
           GK+  +   +I  +A+KF+ +TTNPSFMVTMG SYLHT  S L+IP  FA+ +++  K++
Sbjct: 117 GKVKKRERFSISEEATKFQSLTTNPSFMVTMGASYLHTGKSYLSIPQWFANAHMESPKEM 176

Query: 65  ILYVSSDDQKVWKILCVERWLYARSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQK 124
            + VS  D +VWKILC ERW      +R EM  GWR+FARDN LK+GDICVFELM+  + 
Sbjct: 177 SVEVS--DGRVWKILCGERW--PHGVKRVEMRGGWRDFARDNGLKKGDICVFELMETSEL 236

Query: 125 MSLFKTTIFRFG 135
              FK TIFR G
Sbjct: 237 S--FKATIFRSG 242

[Close]

BLAST of Cmc11g0286131 vs. ExPASy TrEMBL
Match: A0A6J1I6H9 (B3 domain-containing transcription factor VRN1-like OS=Cucurbita maxima OX=3661 GN=LOC111470377 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 8.0e-25
Identity = 69/132 (52.27%), Postives = 90/132 (68.18%), Query Frame = 0


Query: 5   GKIWSKRSSTIFAKASKFKEITTNPSFMVTMGRSYLHT--SNLNIPTGFASTYLKETKDL 64
           GK+  +   +I  +A+KF+ +T NPSFMVTMG SYLHT  S L+IP  FA+ +++  K++
Sbjct: 117 GKVKKRERFSITEEATKFQSLTMNPSFMVTMGASYLHTGKSYLSIPLWFANAHMESPKEM 176

Query: 65  ILYVSSDDQKVWKILCVERWLYARSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQK 124
            + VS  D +VWKILC ERW      +R EM  GWR+FARDN LK+GDICVFELM+  + 
Sbjct: 177 NVEVS--DGRVWKILCGERW--PLGVKRVEMRGGWRDFARDNGLKKGDICVFELMETSEL 236

Query: 125 MSLFKTTIFRFG 135
              FK TIFR G
Sbjct: 237 S--FKATIFRSG 242

[Close]

BLAST of Cmc11g0286131 vs. ExPASy TrEMBL
Match: A0A6J1L7I9 (B3 domain-containing transcription factor VRN1-like OS=Cucurbita maxima OX=3661 GN=LOC111499897 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.0e-20
Identity = 60/115 (52.17%), Postives = 76/115 (66.09%), Query Frame = 0


Query: 19  ASKFKEITTNPSFMVTMGRSYLHTSN-LNIPTGFASTYLKETKDLILYVSSDDQKVWKIL 78
           AS FK  T NPSFMVTM  SY+ T N L++P  FA  YL+E+ D+ L V+  D ++W + 
Sbjct: 311 ASSFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLQESTDVKLEVA--DGRIWSVW 370

Query: 79  CVERWLYARSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQKMSLFKTTIFR 133
           C  RW + R  +R E+  GW+ FA DN LKEGD+CVFELM  I K+  FK TIFR
Sbjct: 371 CGVRWAFTR--RRTELKCGWKRFAVDNQLKEGDVCVFELMNRIPKV-FFKVTIFR 420

[Close]

BLAST of Cmc11g0286131 vs. ExPASy TrEMBL
Match: A0A6J1G5F5 (B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451014 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.0e-20
Identity = 60/115 (52.17%), Postives = 76/115 (66.09%), Query Frame = 0


Query: 19  ASKFKEITTNPSFMVTMGRSYLHTSN-LNIPTGFASTYLKETKDLILYVSSDDQKVWKIL 78
           AS FK  T NPSFMVTM  SY+ T N L++P  FA  YL+E+ D+ L V+  D ++W + 
Sbjct: 310 ASSFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLQESTDVKLEVA--DGRIWSVW 369

Query: 79  CVERWLYARSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQKMSLFKTTIFR 133
           C  RW + R  +R E+  GW+ FA DN LKEGD+CVFELM  I K+  FK TIFR
Sbjct: 370 CGVRWAFTR--RRTELKCGWKRFAVDNQLKEGDVCVFELMNRIPKV-FFKVTIFR 419

[Close]

BLAST of Cmc11g0286131 vs. TAIR 10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.2e-09
Identity = 37/107 (34.58%), Postives = 57/107 (53.27%), Query Frame = 0


Query: 27  TNPSFMVTMGRSYLHTS-NLNIPTGFASTYLKETKDLILYVSSDDQKVWKILCVERWLYA 86
           TNP F V +  SYL+    + +P+GFA  YL      I    ++ Q  W + C+ +    
Sbjct: 240 TNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQ--WPVRCLYK---- 299

Query: 87  RSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQKMSLFKTTIFR 133
               R + ++GW EF  +N+L EGD+CVFEL++   +  + K T FR
Sbjct: 300 --AGRAKFSQGWYEFTLENNLGEGDVCVFELLRT--RDFVLKVTAFR 336

[Close]

BLAST of Cmc11g0286131 vs. TAIR 10
Match: AT1G49480.1 (related to vernalization1 1 )

HSP 1 Score: 57.8 bits (138), Expect = 8.0e-09
Identity = 35/107 (32.71%), Postives = 56/107 (52.34%), Query Frame = 0


Query: 27  TNPSFMVTMGRSYLHTS-NLNIPTGFASTYLKETKDLILYVSSDDQKVWKILCVERWLYA 86
           TNP F V +  SYL+    + +P+GFA  YL      I     + Q  W + C+ +    
Sbjct: 125 TNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGEKQ--WPVRCLYK---- 184

Query: 87  RSCQRFEMAKGWREFARDNSLKEGDICVFELMKNIQKMSLFKTTIFR 133
               R + ++GW EF  +N++ EGD+CVFEL++   +  + + T FR
Sbjct: 185 --AGRAKFSQGWYEFTLENNIGEGDVCVFELLRT--RDFVLEVTAFR 221

[Close]

BLAST of Cmc11g0286131 vs. TAIR 10
Match: AT4G33280.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 41.2 bits (95), Expect = 7.7e-04
Identity = 17/40 (42.50%), Postives = 26/40 (65.00%), Query Frame = 0


Query: 93  MAKGWREFARDNSLKEGDICVFELMKNIQKMSLFKTTIFR 133
           ++ GW++F +DN+L+EGD+CVFE   +  K       IFR
Sbjct: 280 ISTGWKKFVQDNNLREGDVCVFEPANSETKPLHLNVYIFR 319

The following BLAST results are available for this feature:

BLAST of Cmc11g0286131 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902166.1	1.1e-68	98.51	PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo]	[more]
KAG7011178.1	5.2e-26	53.38	B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma ...	[more]
KAG6571413.1	5.2e-26	53.38	B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma ...	[more]
XP_022928091.1	1.5e-25	53.03	B3 domain-containing transcription factor VRN1-like [Cucurbita moschata]	[more]
XP_023513190.1	7.5e-25	52.27	B3 domain-containing transcription factor VRN1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc11g0286131 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L3W1	1.7e-08	34.58	B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9XIB5	1.1e-07	32.71	B3 domain-containing protein REM19 OS=Arabidopsis thaliana OX=3702 GN=REM19 PE=1...	[more]
Q2QMT5	2.5e-07	29.29	B3 domain-containing protein LOC_Os12g40090 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q2QMT2	7.3e-07	30.30	B3 domain-containing protein Os12g0592300 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q851W4	2.8e-06	31.78	B3 domain-containing protein Os03g0620500 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of Cmc11g0286131 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E1R2	5.3e-69	98.51	B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A6J1EJA7	7.3e-26	53.03	B3 domain-containing transcription factor VRN1-like OS=Cucurbita moschata OX=366...	[more]
A0A6J1I6H9	8.0e-25	52.27	B3 domain-containing transcription factor VRN1-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1L7I9	2.0e-20	52.17	B3 domain-containing transcription factor VRN1-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1G5F5	2.0e-20	52.17	B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita mosc...	[more]

BLAST of Cmc11g0286131 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18990.1	1.2e-09	34.58	AP2/B3-like transcriptional factor family protein	[more]
AT1G49480.1	8.0e-09	32.71	related to vernalization1 1	[more]
AT4G33280.1	7.7e-04	42.50	AP2/B3-like transcriptional factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 31..129 e-value: 4.3E-9 score: 46.2
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 33..123 e-value: 9.4E-16 score: 57.5
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 30..134 score: 12.32254
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 29..132 e-value: 1.59954E-17 score: 70.4345
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 7..133 e-value: 9.8E-27 score: 95.1
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 27..131
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 10..132
None	No IPR available	PANTHER	PTHR31920:SF26	TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED	coord: 10..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0286131.1	Cmc11g0286131.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding