Cmc11g0285361 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0285361
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 835779 .. 836267 (+)
RNA-Seq Expression	Cmc11g0285361
Synteny	Cmc11g0285361

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCTAGTAAACTACTCAGCCAGGGAACTTGGGGCATCTTGGCAAGCGTAGTGGATGTGAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGGGAGTACCCCGACGTTTTCCCAGACGAACTTCCAGGACTTCCGCCTCCCAGAGAAGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGACGACCTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACTAG

mRNA sequence

ATGAAGGCTAGTAAACTACTCAGCCAGGGAACTTGGGGCATCTTGGCAAGCGTAGTGGATGTGAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGGGAGTACCCCGACGTTTTCCCAGACGAACTTCCAGGACTTCCGCCTCCCAGAGAAGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGACGACCTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACTAG

Coding sequence (CDS)

ATGAAGGCTAGTAAACTACTCAGCCAGGGAACTTGGGGCATCTTGGCAAGCGTAGTGGATGTGAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGGGAGTACCCCGACGTTTTCCCAGACGAACTTCCAGGACTTCCGCCTCCCAGAGAAGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGACGACCTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACTAG

Protein sequence

MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH

Homology

[Close]

BLAST of Cmc11g0285361 vs. NCBI nr
Match: KAA0031437.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 329.3 bits (843), Expect = 1.8e-86
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
           MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 481 MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 540

Query: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 541 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 600

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 163
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH
Sbjct: 601 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 642

[Close]

BLAST of Cmc11g0285361 vs. NCBI nr
Match: KAA0033825.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 329.3 bits (843), Expect = 1.8e-86
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1    MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
            MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 1145 MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 1204

Query: 61   EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 1205 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 1264

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 163
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH
Sbjct: 1265 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 1306

[Close]

BLAST of Cmc11g0285361 vs. NCBI nr
Match: KAA0025848.1 (pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo var. makuwa] >KAA0036593.1 pol protein [Cucumis melo var. makuwa] >KAA0036739.1 pol protein [Cucumis melo var. makuwa] >KAA0037408.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 329.3 bits (843), Expect = 1.8e-86
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
           MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 540 MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 599

Query: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 600 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 659

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 163
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH
Sbjct: 660 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 701

[Close]

BLAST of Cmc11g0285361 vs. NCBI nr
Match: TYK20443.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 329.3 bits (843), Expect = 1.8e-86
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1    MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
            MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 862  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 921

Query: 61   EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 922  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 981

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 163
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH
Sbjct: 982  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 1023

[Close]

BLAST of Cmc11g0285361 vs. NCBI nr
Match: TYK28422.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 329.3 bits (843), Expect = 1.8e-86
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1    MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
            MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 891  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 950

Query: 61   EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 951  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 1010

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 163
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH
Sbjct: 1011 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 1052

[Close]

BLAST of Cmc11g0285361 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 111.7 bits (278), Expect = 7.9e-24
Identity = 62/175 (35.43%), Postives = 97/175 (55.43%), Query Frame = 0


Query: 2   KASKLLSQGTWGILASVVDVREPEVSLSSEP---------VVREYPDVFPDELPGLPPPR 61
           +AS L   G +  + S +   EP  +  S           + ++Y ++  ++LP  P P 
Sbjct: 520 EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLP--PRPA 579

Query: 62  EVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVL 121
           +++       IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+
Sbjct: 580 DINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVV 639

Query: 122 FVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 163
            V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYH
Sbjct: 640 LVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYH 692

[Close]

BLAST of Cmc11g0285361 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 7.9e-24
Identity = 62/175 (35.43%), Postives = 97/175 (55.43%), Query Frame = 0


Query: 2   KASKLLSQGTWGILASVVDVREPEVSLSSEP---------VVREYPDVFPDELPGLPPPR 61
           +AS L   G +  + S +   EP  +  S           + ++Y ++  ++LP  P P 
Sbjct: 546 EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLP--PRPA 605

Query: 62  EVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVL 121
           +++       IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+
Sbjct: 606 DINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVV 665

Query: 122 FVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 163
            V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYH
Sbjct: 666 LVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYH 718

[Close]

BLAST of Cmc11g0285361 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 9.9e-19
Identity = 49/144 (34.03%), Postives = 85/144 (59.03%), Query Frame = 0


Query: 21  VREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 80
           V+EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369 VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 81  LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 140
           ++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP 
Sbjct: 429 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 141 IDDLFDQLQGATVFSKIDLRSGYH 163
           I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 489 IEQLLAKIQGSTIFTKLDLKSAYH 508

[Close]

BLAST of Cmc11g0285361 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 9.9e-19
Identity = 49/144 (34.03%), Postives = 85/144 (59.03%), Query Frame = 0


Query: 21  VREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 80
           V+EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369 VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 81  LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 140
           ++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP 
Sbjct: 429 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 141 IDDLFDQLQGATVFSKIDLRSGYH 163
           I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 489 IEQLLAKIQGSTIFTKLDLKSAYH 508

[Close]

BLAST of Cmc11g0285361 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 9.9e-19
Identity = 49/144 (34.03%), Postives = 85/144 (59.03%), Query Frame = 0


Query: 21  VREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 80
           V+EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369 VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 81  LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 140
           ++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP 
Sbjct: 429 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 141 IDDLFDQLQGATVFSKIDLRSGYH 163
           I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 489 IEQLLAKIQGSTIFTKLDLKSAYH 508

[Close]

BLAST of Cmc11g0285361 vs. ExPASy TrEMBL
Match: A0A5D3CQB5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001420 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 8.9e-87
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
           MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 540 MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 599

Query: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 600 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 659

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 163
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH
Sbjct: 660 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 701

[Close]

BLAST of Cmc11g0285361 vs. ExPASy TrEMBL
Match: A0A5A7UBS1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G00110 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 8.9e-87
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
           MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 540 MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 599

Query: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 600 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 659

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 163
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH
Sbjct: 660 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 701

[Close]

BLAST of Cmc11g0285361 vs. ExPASy TrEMBL
Match: A0A5A7TEQ2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00410 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 8.9e-87
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
           MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 540 MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 599

Query: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 600 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 659

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 163
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH
Sbjct: 660 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 701

[Close]

BLAST of Cmc11g0285361 vs. ExPASy TrEMBL
Match: A0A5A7TSL0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G001340 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 8.9e-87
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
           MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 540 MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 599

Query: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 600 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 659

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 163
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH
Sbjct: 660 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 701

[Close]

BLAST of Cmc11g0285361 vs. ExPASy TrEMBL
Match: A0A5D3DY07 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00520 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 8.9e-87
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1    MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
            MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 891  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 950

Query: 61   EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 951  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 1010

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 163
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH
Sbjct: 1011 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 1052

[Close]

BLAST of Cmc11g0285361 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 41.2 bits (95), Expect = 9.3e-04
Identity = 18/33 (54.55%), Postives = 25/33 (75.76%), Query Frame = 0


Query: 82  LKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDG 115
           LK  L E+L+   I+PS+SP+ +PVL V+KKDG
Sbjct: 45  LKNWLGEMLEARIIQPSISPYSSPVLLVQKKDG 77

The following BLAST results are available for this feature:

BLAST of Cmc11g0285361 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031437.1	1.8e-86	100.00	pol protein [Cucumis melo var. makuwa]	[more]
KAA0033825.1	1.8e-86	100.00	pol protein [Cucumis melo var. makuwa]	[more]
KAA0025848.1	1.8e-86	100.00	pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo v...	[more]
TYK20443.1	1.8e-86	100.00	pol protein [Cucumis melo var. makuwa]	[more]
TYK28422.1	1.8e-86	100.00	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0285361 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	7.9e-24	35.43	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	7.9e-24	35.43	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q9UR07	9.9e-19	34.03	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	9.9e-19	34.03	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	9.9e-19	34.03	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc11g0285361 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CQB5	8.9e-87	100.00	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7UBS1	8.9e-87	100.00	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7TEQ2	8.9e-87	100.00	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold19...	[more]
A0A5A7TSL0	8.9e-87	100.00	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19...	[more]
A0A5D3DY07	8.9e-87	100.00	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold62...	[more]

BLAST of Cmc11g0285361 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00850.1	9.3e-04	54.55	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 55..162 e-value: 7.6E-47 score: 161.3
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 26..162
None	No IPR available	PANTHER	PTHR24559:SF382	SUBFAMILY NOT NAMED	coord: 26..162
None	No IPR available	CDD	cd01647	RT_LTR	coord: 93..162 e-value: 1.05148E-39 score: 130.408
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 134..161 e-value: 7.6E-47 score: 161.3
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 33..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0285361.1	Cmc11g0285361.1	mRNA