Cmc10g0283981 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0283981
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionDUF4216 domain-containing protein
LocationCMiso1.1chr10: 24482626 .. 24485401 (-)
RNA-Seq ExpressionCmc10g0283981
SyntenyCmc10g0283981
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGTATGCTAAAAAACACAAGCCATCCACCTTCTTCAAATGGCTAAAACTTGCTTGTCATGTTATAAATTCACCAAAATCTCCATTGATTTAGTATCTGTACCTTGAATACACTTTTTGTTGATATGAGACACTCTATTTATTTGTCAGGCGCTAAAAGTTCTTCTCAGCCTTCTACTTCAAATCTCAACACTTCAGAATCCATTTTTATTCAAAAGGTTGTTTTTCTCTCCTTTTGTACTTTGTGCAAGTGCATCGTTTGATCAATTTTTTTGCTTTTAGCCATTGATATGGTTGTAGGTGTTTTAGCTTTGAGTTTTGTTATTCGCTGTTGGTTTTGGACTTTCTATGAAGTGCTATAATTAATTTAGCTGATTTTGTCGGTTGAATTTGGTGTTTGCGATTTTGTTTTTTTTTTCTTGTTCATACGGATGAACTTTGTAGATTTCATTTTTAGTGATAAAATTGTGCATTGTGTACTTGAACAGTAGCATAATTTTGTGACCCGTATATGTAAGGCTTTCCATTTGAATACCCTCTACATTTCCAATACCAAGCTTAAAAGTTATAGAAAAGAATAATTCACTACCAAGCTTAGAAGTTACTATTGTTGAAGTGTGTATGTACTGTGTTATTGAAGTGTGTTGGTGAAATGAATGTGTTGTGTTTTTGAAGTGAATGTGTTGTGTTTTTCAAGTGAATGTACTGTCTTGTTGAATCAATTTTTTTTCCTTTTCTTTTCTTACTAGGTTTTGCCAGAATCCATTGGAGCAGTGAAACCATATTTGCGTCAATTCATTGATGTATAGGCATTTTTATAGGTTTGGTAGGAAAATTTTTGGTTCAAATGTACTTATTTAAATAGCTTGTTCGTACCAAAACATATATATACCAACAATTAAAGCGAAATTAGAAAGTGTATGTTTCTTTATATTAAAGCGTTCACTGTTTCTTTCCATATGCGATTGTATTAGTCTATGTAATGGTATATGTAATGGCAGGGCGACAAGAAAAACAAGATTCAATGAAAAATAGGACAAGAAAAATAGTGACAAAAAACACAATTATGACATTTAAATCTAAAAAAAAAGTGTCATAAAAAACGTTTTCTTGACAGTTAATTAAAGTCATGGTAAGTGAAATGATGACAGCTAATAAGTGTCATAAATGATAAATAATGACATTTATTTGCTGTCATAAAATGAAAATAATGACAGTTATTAACTGTCATAAAATATAAACAATGATAGTTATTATCTGGTATTGAAAATAAATAATGACAATTATAATCTGTCATAAAATATTGAATTCGTGGCATTTATTCTATGTCATGAAAAACACATTTCATGACAGTTTTGGAGAACTGTCATAAAATACTTTCCATCACTGTCGCATCAATGACTGCAAATAACTGTCACGAAAGCTTTCTGTGACATCATTTAACCGTAGTCGTAGGCCCTTTTTCTACTAGTGCTTTTTGTATATCGCCTAGTTGGTTGACAAAAACAATGGCTGCCTTAGATGGTTTCTTCATTTCGCTTCCTTCTTCTTTGTGTTATAATTTTGTGTTAAGGCAATAAAATTTGGAATAAATAGGCATTTTGTCTTTTGTAACCTATAAAACACATTACTCTTAATTTCACATGTTTTGCTATGCTTTATGCTCTTTTATAGCACAATTTTATTTCATTATTTTATCTAAAAGACTACAATAACTTGTATTTCTACAAGTTCTCACAAAGATGCTCATAGTGAAGAGTTCAACAATGATATTATTCATGATGGTCACCTCATATCATCTGCATAACATGTTACATTAGAAGATGACATTCTCGAACTAACACATTAATATGTGTTGTTTAACACAACTGAGATGGAACTATATATAGAGTGAGTAATTTATTTAATCGCATGTAAATTTATGCCAAATTAACTATATAAGTGTTATTCATGATCCATCAATCACTCAGAATGCATAAAAATGAGTTGTTACTCTCTAGTAGAAAACTTGCAAGTGATAATAGTCTTTTTAGAAAGATTTACTCTGAACAATTTTTTCGTTGGTTAACAGATAAGGTGATAATCAACTACACACTAGCATGGGTAATATACTTCACTCGTTAATCTAAGGTGTAACTTTTATTTATATGAGCAGATTCCGCTAGATTTTCCTAACACAGATCACTAAAATGGCTTGCTTGCTTATAAACCTCACAAGATTGAAATATCATATTCGAGGTACATTATAAATGGCCACAGAGACCATATAAAAGTGTAGAAAAGACAACTCAAAGTGGTGGTACCGTGTTTCTATTGATACAACCACTTGTAAATCAAATGATATAGATTGAGCTCTAATCATTAATGTGGTTACATATTTCGAAATAGCATTATTTCTTAATACATGCATCGAATTCCAATGCTCAAGTGTGATCGGGAAAATGTTTATAATGGTGTCAAAGTTGAATATGGATTTACACTTATTAACTTACATCAAAATCAACATCAATTTGAGAGAGAGTCATATAATCTTGCATCACAAGCAAAACAAGTATTTTGTGCAAGAGAACATGACATTTCTAACTGATATGTTTTATTAAGAGCACCCCTAAGAGGAATTCATGAATTAGAAAAGTATGACAAAGTTGACGTGGATAAGAAGTTTTCTGGTCAAGGTTCTTTCATAACGCTTGAAGAAATTGATGAGGAGTTTGAACATCGTAGGTATCGAGATGATTGTAAAGACATGTTTATCGTTGTGATAACATATAGTGCGC

mRNA sequence

TTGTATGCTAAAAAACACAAGCCATCCACCTTCTTCAAATGGCTAAAACTTGCTTGTCATGTTATAAATTCACCAAAATCTCCATTGATTTAGTATCTGTACCTTGAATACACTTTTTGTTGATATGAGACACTCTATTTATTTGTCAGGCGCTAAAAGTTCTTCTCAGCCTTCTACTTCAAATCTCAACACTTCAGAATCCATTTTTATTCAAAAGGTTTTGCCAGAATCCATTGGAGCAGTGAAACCATATTTGCGTCAATTCATTGATGTATAGGCATTTTTATAGGTTTGGTAGGAAAATTTTTGGTTCAAATGTACTTATTTAAATAGCTTGTTCGTACCAAAACATATATATACCAACAATTAAAGCGAAATTAGAAAGTGTATGTTTCTTTATATTAAAGCGTTCACTGTTTCTTTCCATATGCGATTGTATTAGTCTATGTAATGGTATATGTAATGGCAGGGCGACAAGAAAAACAAGATTCAATGAAAAATAGGACAAGAAAAATAGTGACAAAAAACACAATTATGACATTTAAATCTAAAAAAAAAGTGTCATAAAAAACGTTTTCTTGACAGTTAATTAAAGTCATGGTAAGTGAAATGATGACAGCTAATAAGTGTCATAAATGATAAATAATGACATTTATTTGCTGTCATAAAATGAAAATAATGACAGTTATTAACTGTCATAAAATATAAACAATGATAGTTATTATCTGGTATTGAAAATAAATAATGACAATTATAATCTGTCATAAAATATTGAATTCGTGGCATTTATTCTATGTCATGAAAAACACATTTCATGACAGTTTTGGAGAACTGTCATAAAATACTTTCCATCACTGTCGCATCAATGACTGCAAATAACTGTCACGAAAGCTTTCTGTGACATCATTTAACCGTAGTCGTAGGCCCTTTTTCTACTAGTGCTTTTTGTATATCGCCTAGTTGGTTGACAAAAACAATGGCTGCCTTAGATGGTTTCTTCATTTCGCTTCCTTCTTCTTTGTGTTATAATTTTGTGTTAAGGCAATAAAATTTGGAATAAATAGGCATTTTGTCTTTTGTAACCTATAAAACACATTACTCTTAATTTCACATGTTTTGCTATGCTTTATGCTCTTTTATAGCACAATTTTATTTCATTATTTTATCTAAAAGACTACAATAACTTGTATTTCTACAAGTTCTCACAAAGATGCTCATAGTGAAGAGTTCAACAATGATATTATTCATGATGGTCACCTCATATCATCTGCATAACATGTTACATTAGAAGATGACATTCTCGAACTAACACATTAATATGTGTTGTTTAACACAACTGAGATGGAACTATATATAGAGTGAGTAATTTATTTAATCGCATGTAAATTTATGCCAAATTAACTATATAAGTGTTATTCATGATCCATCAATCACTCAGAATGCATAAAAATGAGTTGTTACTCTCTAGTAGAAAACTTGCAAGTGATAATAGTCTTTTTAGAAAGATTTACTCTGAACAATTTTTTCGTTGGTTAACAGATAAGGTGATAATCAACTACACACTAGCATGGGTAATATACTTCACTCGTTAATCTAAGGTGTAACTTTTATTTATATGAGCAGATTCCGCTAGATTTTCCTAACACAGATCACTAAAATGGCTTGCTTGCTTATAAACCTCACAAGATTGAAATATCATATTCGAGGTACATTATAAATGGCCACAGAGACCATATAAAAGTGTAGAAAAGACAACTCAAAGTGGTGGTACCGTGTTTCTATTGATACAACCACTTGTAAATCAAATGATATAGATTGAGCTCTAATCATTAATGTGGTTACATATTTCGAAATAGCATTATTTCTTAATACATGCATCGAATTCCAATGCTCAAGTGTGATCGGGAAAATGTTTATAATGGTGTCAAAGTTGAATATGGATTTACACTTATTAACTTACATCAAAATCAACATCAATTTGAGAGAGAGTCATATAATCTTGCATCACAAGCAAAACAAGTATTTTGTGCAAGAGAACATGACATTTCTAACTGATATGTTTTATTAAGAGCACCCCTAAGAGGAATTCATGAATTAGAAAAGTATGACAAAGTTGACGTGGATAAGAAGTTTTCTGGTCAAGGTTCTTTCATAACGCTTGAAGAAATTGATGAGGAGTTTGAACATCGTAGGTATCGAGATGATTGTAAAGACATGTTTATCGTTGTGATAACATATAGTGCGC

Coding sequence (CDS)

ATGCATCGAATTCCAATGCTCAAGTGTGATCGGGAAAATGTTTATAATGGTGTCAAAGTTGAATATGGATTTACACTTATTAACTTACATCAAAATCAACATCAATTTGAGAGAGAGTCATATAATCTTGCATCACAAGCAAAACAAGTATTTTGTGCAAGAGAACATGACATTTCTAACTGA

Protein sequence

MHRIPMLKCDRENVYNGVKVEYGFTLINLHQNQHQFERESYNLASQAKQVFCAREHDISN
Homology
[Close]
BLAST of Cmc10g0283981 vs. NCBI nr
Match: TYK00395.1 (uncharacterized protein E5676_scaffold1112G00640 [Cucumis melo var. makuwa])

HSP 1 Score: 84.0 bits (206), Expect = 5.0e-13
Identity = 38/60 (63.33%), Postives = 50/60 (83.33%), Query Frame = 0 

Query: 1   MHRIPMLKCDRENVYNGVKVEYGFTLINLHQNQHQFERESYNLASQAKQVFCAREHDISN 60
           +H+IP+ +CD  NV NGV+VE GFTL+NLHQ+QHQF +E + LASQAKQVF +RE++ SN
Sbjct: 659 VHQIPLFRCDWVNVSNGVRVEDGFTLVNLHQSQHQFSKEPFILASQAKQVFYSRENETSN 718

[Close]
BLAST of Cmc10g0283981 vs. NCBI nr
Match: TYK21964.1 (uncharacterized protein E5676_scaffold543G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 84.0 bits (206), Expect = 5.0e-13
Identity = 38/60 (63.33%), Postives = 50/60 (83.33%), Query Frame = 0 

Query: 1   MHRIPMLKCDRENVYNGVKVEYGFTLINLHQNQHQFERESYNLASQAKQVFCAREHDISN 60
           +H+IP+ +CD  NV NGV+VE GFTL+NLHQ+QHQF +E + LASQAKQVF +RE++ SN
Sbjct: 195 VHQIPLFRCDWVNVSNGVRVEDGFTLVNLHQSQHQFSKEPFILASQAKQVFYSRENETSN 254

[Close]
BLAST of Cmc10g0283981 vs. NCBI nr
Match: TYK22476.1 (uncharacterized protein E5676_scaffold19523G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 84.0 bits (206), Expect = 5.0e-13
Identity = 38/60 (63.33%), Postives = 50/60 (83.33%), Query Frame = 0 

Query: 1   MHRIPMLKCDRENVYNGVKVEYGFTLINLHQNQHQFERESYNLASQAKQVFCAREHDISN 60
           +H+IP+ +CD  NV NGV+VE GFTL+NLHQ+QHQF +E + LASQAKQVF +RE++ SN
Sbjct: 261 VHQIPLFRCDWVNVSNGVRVEDGFTLVNLHQSQHQFSKEPFILASQAKQVFYSRENETSN 320

[Close]
BLAST of Cmc10g0283981 vs. NCBI nr
Match: KAA0058324.1 (uncharacterized protein E6C27_scaffold409G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 83.2 bits (204), Expect = 8.5e-13
Identity = 38/60 (63.33%), Postives = 50/60 (83.33%), Query Frame = 0 

Query: 1   MHRIPMLKCDRENVYNGVKVEYGFTLINLHQNQHQFERESYNLASQAKQVFCAREHDISN 60
           +H+IP+ +CD  NV NGV+VE GFT +NLHQ+QHQF +ES+ LASQAKQVF +RE++ SN
Sbjct: 230 VHQIPLFRCDWVNVSNGVRVEDGFTPVNLHQSQHQFSKESFILASQAKQVFYSRENETSN 289

[Close]
BLAST of Cmc10g0283981 vs. NCBI nr
Match: TYK28559.1 (uncharacterized protein E5676_scaffold629G002060 [Cucumis melo var. makuwa])

HSP 1 Score: 82.8 bits (203), Expect = 1.1e-12
Identity = 39/59 (66.10%), Postives = 47/59 (79.66%), Query Frame = 0 

Query: 1   MHRIPMLKCDRENVYNGVKVEYGFTLINLHQNQHQFERESYNLASQAKQVFCAREHDIS 60
           ++R+PM KCD   ++NGVKV+ GFTL+NLHQNQ QF  E Y LASQAKQVF ARE+D S
Sbjct: 377 VYRLPMFKCDWAKIHNGVKVDDGFTLVNLHQNQSQFSSEPYILASQAKQVFYARENDNS 435

[Close]
BLAST of Cmc10g0283981 vs. ExPASy TrEMBL
Match: A0A5D3DEF0 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold543G00100 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-13
Identity = 38/60 (63.33%), Postives = 50/60 (83.33%), Query Frame = 0 

Query: 1   MHRIPMLKCDRENVYNGVKVEYGFTLINLHQNQHQFERESYNLASQAKQVFCAREHDISN 60
           +H+IP+ +CD  NV NGV+VE GFTL+NLHQ+QHQF +E + LASQAKQVF +RE++ SN
Sbjct: 195 VHQIPLFRCDWVNVSNGVRVEDGFTLVNLHQSQHQFSKEPFILASQAKQVFYSRENETSN 254

[Close]
BLAST of Cmc10g0283981 vs. ExPASy TrEMBL
Match: A0A5D3DFV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold19523G00020 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-13
Identity = 38/60 (63.33%), Postives = 50/60 (83.33%), Query Frame = 0 

Query: 1   MHRIPMLKCDRENVYNGVKVEYGFTLINLHQNQHQFERESYNLASQAKQVFCAREHDISN 60
           +H+IP+ +CD  NV NGV+VE GFTL+NLHQ+QHQF +E + LASQAKQVF +RE++ SN
Sbjct: 261 VHQIPLFRCDWVNVSNGVRVEDGFTLVNLHQSQHQFSKEPFILASQAKQVFYSRENETSN 320

[Close]
BLAST of Cmc10g0283981 vs. ExPASy TrEMBL
Match: A0A5D3BMU6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00640 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-13
Identity = 38/60 (63.33%), Postives = 50/60 (83.33%), Query Frame = 0 

Query: 1   MHRIPMLKCDRENVYNGVKVEYGFTLINLHQNQHQFERESYNLASQAKQVFCAREHDISN 60
           +H+IP+ +CD  NV NGV+VE GFTL+NLHQ+QHQF +E + LASQAKQVF +RE++ SN
Sbjct: 659 VHQIPLFRCDWVNVSNGVRVEDGFTLVNLHQSQHQFSKEPFILASQAKQVFYSRENETSN 718

[Close]
BLAST of Cmc10g0283981 vs. ExPASy TrEMBL
Match: A0A5A7UT16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold409G00010 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.1e-13
Identity = 38/60 (63.33%), Postives = 50/60 (83.33%), Query Frame = 0 

Query: 1   MHRIPMLKCDRENVYNGVKVEYGFTLINLHQNQHQFERESYNLASQAKQVFCAREHDISN 60
           +H+IP+ +CD  NV NGV+VE GFT +NLHQ+QHQF +ES+ LASQAKQVF +RE++ SN
Sbjct: 230 VHQIPLFRCDWVNVSNGVRVEDGFTPVNLHQSQHQFSKESFILASQAKQVFYSRENETSN 289

[Close]
BLAST of Cmc10g0283981 vs. ExPASy TrEMBL
Match: A0A5A7U726 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G00200 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.4e-13
Identity = 39/59 (66.10%), Postives = 47/59 (79.66%), Query Frame = 0 

Query: 1   MHRIPMLKCDRENVYNGVKVEYGFTLINLHQNQHQFERESYNLASQAKQVFCAREHDIS 60
           ++R+PM KCD   ++NGVKV+ GFTL+NLHQNQ QF  E Y LASQAKQVF ARE+D S
Sbjct: 697 VYRLPMFKCDWAKIHNGVKVDDGFTLVNLHQNQSQFSSEPYILASQAKQVFYARENDNS 755

The following BLAST results are available for this feature:
BLAST of Cmc10g0283981 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK00395.15.0e-1363.33uncharacterized protein E5676_scaffold1112G00640 [Cucumis melo var. makuwa][more]
TYK21964.15.0e-1363.33uncharacterized protein E5676_scaffold543G00100 [Cucumis melo var. makuwa][more]
TYK22476.15.0e-1363.33uncharacterized protein E5676_scaffold19523G00020 [Cucumis melo var. makuwa][more]
KAA0058324.18.5e-1363.33uncharacterized protein E6C27_scaffold409G00010 [Cucumis melo var. makuwa][more]
TYK28559.11.1e-1266.10uncharacterized protein E5676_scaffold629G002060 [Cucumis melo var. makuwa][more]
BLAST of Cmc10g0283981 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc10g0283981 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DEF02.4e-1363.33DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3DFV22.4e-1363.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BMU62.4e-1363.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UT164.1e-1363.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U7265.4e-1366.10Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of Cmc10g0283981 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0283981.1Cmc10g0283981.1mRNA