Cmc10g0283491 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTCGTCTTCCAAAGAAAATGCTTCACCGTCAGATCCCAAATTCCCAACTCCATGGTTCCCGATTCCAAACCCTCGCCGACTAAGTTGAAGAGCCTGCTCCATCTTCTAACCCACTTAAGCGGAAGCTCAGTATGGAGACCGTTCCTGAGAATTCCATCCCTGGGTTGTCTGATTCTGTTGTTAAGGTAGTTTACGTGGTGTGATTATGGATGTTTTGGTATATTTTTTTCTTAATTTGTGTGGTGAAATGATATTTTCCTGTAATATGAAAAATTAATTTGGTCTTATGTTGAATCATCTCACAGATTAGAGAAGATGTAAAATCTGGTGTAGAAAATTTAACAGAGGAGTGTGTATCCACAATGGCAGCCGTTACTCGGCTTCTAATGAAGGTTTTTATCTTCCTCGTGCTAATATGCGCACCTGAGTGCACCCCTATCCCTGCAACCGTGTACTAAAAAAAAGTTGCAGTTGTCCAAAATGTCTATATATAATTTGTATGCCATCCTTTATATTTTTAATTTTGTAATTTCGTAGATTGGTTGAACTGACTTCAGTATGCGGTTGAAATCATAAACTCAAGATTAATCATCAAGTTTTGGACCTTGTTAAGTGAAATTAGTTCTATTACTAAAGCATGAAAAAAGATAAACTTTAATAAAGATTAGAAAATGTTCGACACTTTATAGTCTTGATTTGTGTCAAAGACTACTTAAAGCATGAAGTCTCTCATCATGATATTGTGAAAAATTGCATGCCTTTAGTAGTTCATGGTCTCCACTGTTCTTCCTTTTCATGGTTAACCTTTTAAAATGAATCGAATACAATTTTAAACACCATCTTTATAATCTCAGAATAATTATGCAGGGTTTATCAGAATAATATGTTTGTTTCTTCAGATATACTTAATATTTCATTGATTGCTCATTCATTTTGGTTTCCATTTTTAGTCGATTATGGTGGCTCACTTTGGAAACTTGTTACATAGCTACTGCCAAAAGCTTTAAATTGCCTTCCGGATGCACCTCAAAATCAGCTTCATTCTTTGTGTTTTCTAATTTCTAGCTCACTCAATTCAGCCATGGATGTACGGAGGTAAGTAAAGTTCCCTTTTGGAATTCAAGTTCTTCTGTACTTCTTGTTGGAGTTTGAGAGGCATTTTTGTTGTTGTTCTTCTTCTTGCATAACTGTGGTTGTGGAATTTGGGTTTTAGGTAGTGAAAGAACTTGTATTATAGTTTTATGTGGTAAAAGGAATTGGACCCACTTGCCATATGTTCACTCAATTTGATTTTTTACTGTAAGTTGAGTCAGTTGTGGTCATTTTGAAGGGGTTCAACTGCATCTGGGAAGTTGGGAAGGAGTCAAAAGGGATTTTTTAAGCCAAAACTGACTTCTCTCACTTTGCCAGAATTGACTTCTCTCACTTTCTTTCTCTGCACTTCTAACTTCCAAAGTTTTTGTGACTGTTAGTAGTTTCATCAAGTGTTTGTGTTTGCTACTTGGTTATGCTTCATAATTGCTTTAGATTCACAAAAATACTATAACCTGTAGCCCTGTAATTCTATCCATTTCAGGAGTTTGTGATCTTTTTGTGTGTAGGAACTAACACAAATTGAATATTTAAAAAGTGAAAAGTAGTTGGGTTTGTAGAAAATAAGTGCCATTTGGTTGAGCTATGACTACTTTTGAAGATGGTTTTATTTTAACTATGACTGCATTTGCTAGTTTGTTTTTTGGTACTTCATTCACCATCCATTTTCTCTCCATGGTTGAGTTTCTCCCCTCATTTATTTTTTATAACATTCATTAGATCACTCTTTAAATCATTCAATTACAAAGGAAAGGCTACTTCAATTCATCATCAGTAAACTATTTTTTTCCTTTAGTAACAATCACTCACATCATTGTCATTTCTCTATGTATTGTCTATAGACCAGGGCGATTTCTAGTTCTCTTCTAAGATTAAATAATTACCAGCTAATCATTTAGGAAGTATTGCAGTTAAATGGTTGTTGGGTTGTCAACTATACTATTTTTTATCTGTTTTCTGTGTGCGGTTGAAATTCTTCTGATGTCCCCCATCTCCTGTGATTCTTTTCTTCAAAATCAAATAGTAGAAGTATCTGTTGGTTCATTTGTTCCACTTGCTTTGTTCCCTGTCCAGGAGTAAACCTTCGTATATTGGAGAAACATGCTCACTGAGAACATTGAGATCAATTTCAACAAGCTTTACTACTAGTTTTGATAGGCTTACGAGTTTTGGAAACATAAGATTTGATCGAGAAGTTAGGAGTAAAGGTTTGGGATATCTTAAATGTTTGGGTGATAGAAACCCGGTATTTCTTCATTTGTGGAATGAAATACTTGTCATGTTGTGTGTGATTGCTACCTTGTTGGATCCTTTGTTCTGTTACACCTTGTTGGTTGATTAAGGCAAAAGATGTGTTGGATTTGACAACAAGATGAGAATAGTAGTTGTAATTGTTAGCTCAATCATAGACTTCCTCTACATAATTCTTATAGTCTGTCATTTTCATTTTAGATATTCCAAATTTTATAATGCAAAACCTGATGAAGCCGATGATGGTGTTTGCACAAGAGCTTGGAGATTCTTTTTATCTTACTTCACAATTGACGTTCTTTCAGTTCTTCCACTCCCCCAGGTATGAAACTTCAGCCTTTTGCTGGCTTAGATTCTATCAATCTTATTGTCAAATTTGTCCATTCCATTTGTAACCAAGGATTCATTTGTAGGACAAGAAAGATAATCATCATTTAGAATATATATGTGAGAGTGCACACACAAAAACAACTAATTATTCAAGCAGAAACATAAAAGCATAATTTACGGAGCATACTGTCCTAAGTTAAGTTTGTGCTATAACAAGATATCCACTCTTGATGTTAAAACACAAAGTCGTATTGTCTAATCCCTTTAGTAATCTACAAGAACTCCAAAGAAATAAGCTCTGGGTCATTATCAATTTTGTTTTCCATCCTAAAATATTCAATTATTCTCCTCTTTGGGAAATTATTGGAGGATGACCATGATTGAGATCTCAAATCTTTACACCAACAGCTGTTTGAATGTCTTTTCTATCTTTTCTTTCTTCTTACCTGGGAGGGGTTAAAAATTTTCATTTCTTGTGCATTATTAGCCATGCAGGGTTTACAGAAAGATTTGAACTTTTCATTTGTGGTCGTGAGCTGGCCAATGCATTTTTCGAATTGATCGATCGTATTTATCAGGTAAGAGGTGATTATATCAATCATTAATGTTAGAAGGGTGCACAGATGATGAAACTTTTTAGCCAATTTCATGGCATTTGAAAGAGAGAAAGTACATTAGTATTGAACTCAAGTTAAACTGGATAGTCTATCACCTTTTGGAAGATAACTTTCCTGTACTTTGTTCCATCTTGTATAGACCCTTTCAGTCGAAAGGTTACCAAAGGAATCGTTTTTGTTATGTGTTATGTGCTTAACTCCATAACAATGTGCGTCCAAGCTCTACATGAGCATTCTATTCTTCTTGCTTGGTATACTTGTGCATTATTGGTTTATGTGCCATGTCAAGAAATAATAGTTTCTATTGGAACGTTTTAGTGTTCCGGTTCCATGATAATTGGAATGGTTGTAATGATCTTTTTCTTTTAAAACAAACAAAATTGGCACAGAGGATGATTAGAAGACCAGATCAGGCAACACAATGAGAAGCATGGCTCAGCTGTTTCTTATGTATCTCGTTTCTTATGTAATGACTCTTTGGACTTCAATTGCCAAAAAGATGAGGATGATTCTTATGAAGTGACACTTGATGATGATTTTCTTACTGCTTTGGAATATGGAATGCCACCAGCTTCTGGACTG TGTCGTCTTCCAAAGAAAATGCTTCACCGTCAGATCCCAAATTCCCAACTCCATGGTTCCCGATTCCAAACCCTCGCCGACTAAGTTGAAGAGCCTGCTCCATCTTCTAACCCACTTAAGCGGAAGCTCAGTATGGAGACCGTTCCTGAGAATTCCATCCCTGGGTTGTCTGATTCTGTTGTTAAGATTAGAGAAGATGTAAAATCTGGTGTAGAAAATTTAACAGAGGAGTGTGTATCCACAATGGCAGCCGTTACTCGGCTTCTAATGAAGTCGATTATGGTGGCTCACTTTGGAAACTTGTTACATAGCTACTGCCAAAAGCTTTAAATTGCCTTCCGGATGCACCTCAAAATCAGCTTCATTCTTTGTGTTTTCTAATTTCTAGCTCACTCAATTCAGCCATGGATGTACGGAGATATTCCAAATTTTATAATGCAAAACCTGATGAAGCCGATGATGGTGTTTGCACAAGAGCTTGGAGATTCTTTTTATCTTACTTCACAATTGACGTTCTTTCAGTTCTTCCACTCCCCCAGCCATGCAGGGTTTACAGAAAGATTTGAACTTTTCATTTGTGGTCGTGAGCTGGCCAATGCATTTTTCGAATTGATCGATCGTATTTATCAGAGGATGATTAGAAGACCAGATCAGGCAACACAATGAGAAGCATGGCTCAGCTGTTTCTTATGTATCTCGTTTCTTATGTAATGACTCTTTGGACTTCAATTGCCAAAAAGATGAGGATGATTCTTATGAAGTGACACTTGATGATGATTTTCTTACTGCTTTGGAATATGGAATGCCACCAGCTTCTGGACTG ATGTACGGAGATATTCCAAATTTTATAATGCAAAACCTGATGAAGCCGATGATGGTGTTTGCACAAGAGCTTGGAGATTCTTTTTATCTTACTTCACAATTGACGTTCTTTCAGTTCTTCCACTCCCCCAGCCATGCAGGGTTTACAGAAAGATTTGAACTTTTCATTTGTGGTCGTGAGCTGGCCAATGCATTTTTCGAATTGATCGATCGTATTTATCAGAGGATGATTAGAAGACCAGATCAGGCAACACAATGA MYGDIPNFIMQNLMKPMMVFAQELGDSFYLTSQLTFFQFFHSPSHAGFTERFELFICGRELANAFFELIDRIYQRMIRRPDQATQ Homology
BLAST of Cmc10g0283491 vs. NCBI nr
Match: XP_008449470.1 (PREDICTED: lysine--tRNA ligase-like [Cucumis melo]) HSP 1 Score: 151.0 bits (380), Expect = 4.7e-33 Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0
BLAST of Cmc10g0283491 vs. NCBI nr
Match: XP_008449893.1 (PREDICTED: lysine--tRNA ligase, chloroplastic/mitochondrial isoform X3 [Cucumis melo]) HSP 1 Score: 56.2 bits (134), Expect = 1.6e-04 Identity = 27/31 (87.10%), Postives = 27/31 (87.10%), Query Frame = 0
BLAST of Cmc10g0283491 vs. NCBI nr
Match: XP_004149642.1 (lysine--tRNA ligase, chloroplastic/mitochondrial [Cucumis sativus] >KGN54021.1 hypothetical protein Csa_021676 [Cucumis sativus]) HSP 1 Score: 56.2 bits (134), Expect = 1.6e-04 Identity = 27/31 (87.10%), Postives = 27/31 (87.10%), Query Frame = 0
BLAST of Cmc10g0283491 vs. NCBI nr
Match: TYK21738.1 (lysine--tRNA ligase [Cucumis melo var. makuwa]) HSP 1 Score: 56.2 bits (134), Expect = 1.6e-04 Identity = 27/31 (87.10%), Postives = 27/31 (87.10%), Query Frame = 0
BLAST of Cmc10g0283491 vs. NCBI nr
Match: XP_008449891.1 (PREDICTED: lysine--tRNA ligase, chloroplastic/mitochondrial isoform X1 [Cucumis melo]) HSP 1 Score: 56.2 bits (134), Expect = 1.6e-04 Identity = 27/31 (87.10%), Postives = 27/31 (87.10%), Query Frame = 0
BLAST of Cmc10g0283491 vs. ExPASy Swiss-Prot
Match: Q9LJE2 (Lysine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OVA5 PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.5e-05 Identity = 23/31 (74.19%), Postives = 26/31 (83.87%), Query Frame = 0
BLAST of Cmc10g0283491 vs. ExPASy Swiss-Prot
Match: Q3B0J9 (Lysine--tRNA ligase OS=Synechococcus sp. (strain CC9902) OX=316279 GN=lysS PE=3 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 4.7e-04 Identity = 24/40 (60.00%), Postives = 25/40 (62.50%), Query Frame = 0
BLAST of Cmc10g0283491 vs. ExPASy Swiss-Prot
Match: A2C629 (Lysine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9303) OX=59922 GN=lysS PE=3 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 6.2e-04 Identity = 24/40 (60.00%), Postives = 25/40 (62.50%), Query Frame = 0
BLAST of Cmc10g0283491 vs. ExPASy Swiss-Prot
Match: Q7U3A4 (Lysine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9313) OX=74547 GN=lysS PE=3 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 6.2e-04 Identity = 24/40 (60.00%), Postives = 25/40 (62.50%), Query Frame = 0
BLAST of Cmc10g0283491 vs. ExPASy Swiss-Prot
Match: Q9KGG4 (Lysine--tRNA ligase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=lysS PE=3 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 8.1e-04 Identity = 30/79 (37.97%), Postives = 39/79 (49.37%), Query Frame = 0
BLAST of Cmc10g0283491 vs. ExPASy TrEMBL
Match: A0A1S3BMQ9 (lysine--tRNA ligase-like OS=Cucumis melo OX=3656 GN=LOC103491344 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 2.3e-33 Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0
BLAST of Cmc10g0283491 vs. ExPASy TrEMBL
Match: A0A5D3DE11 (Lysine--tRNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G001100 PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 7.6e-05 Identity = 27/31 (87.10%), Postives = 27/31 (87.10%), Query Frame = 0
BLAST of Cmc10g0283491 vs. ExPASy TrEMBL
Match: A0A5A7TFD0 (Lysine--tRNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00900 PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 7.6e-05 Identity = 27/31 (87.10%), Postives = 27/31 (87.10%), Query Frame = 0
BLAST of Cmc10g0283491 vs. ExPASy TrEMBL
Match: A0A0A0L1N3 (Lysine--tRNA ligase OS=Cucumis sativus OX=3659 GN=Csa_4G268050 PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 7.6e-05 Identity = 27/31 (87.10%), Postives = 27/31 (87.10%), Query Frame = 0
BLAST of Cmc10g0283491 vs. ExPASy TrEMBL
Match: A0A1S3BP13 (Lysyl-tRNA synthetase OS=Cucumis melo OX=3656 GN=LOC103491634 PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 7.6e-05 Identity = 27/31 (87.10%), Postives = 27/31 (87.10%), Query Frame = 0
BLAST of Cmc10g0283491 vs. TAIR 10
Match: AT3G13490.1 (Lysyl-tRNA synthetase, class II ) HSP 1 Score: 50.1 bits (118), Expect = 1.0e-06 Identity = 23/31 (74.19%), Postives = 26/31 (83.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
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