Cmc10g0282831 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0282831
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
LocationCMiso1.1chr10: 22501146 .. 22501994 (-)
RNA-Seq ExpressionCmc10g0282831
SyntenyCmc10g0282831
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGAAGTTCACTTGTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGTTATGCTCTGCACTAGGCCAGACATTTGTAATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCAAGGGTTAGACCATTGGACGACGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGAGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTACCTACATGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACATCATTGCTGATCCATTTACGAAGACTCTCACGACTTAA

mRNA sequence

ATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGAAGTTCACTTGTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGTTATGCTCTGCACTAGGCCAGACATTTGTAATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCAAGGGTTAGACCATTGGACGACGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGAGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTACCTACATGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACATCATTGCTGATCCATTTACGAAGACTCTCACGACTTAA

Coding sequence (CDS)

ATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGAAGTTCACTTGTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGTTATGCTCTGCACTAGGCCAGACATTTGTAATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCAAGGGTTAGACCATTGGACGACGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGAGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTACCTACATGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACATCATTGCTGATCCATTTACGAAGACTCTCACGACTTAA

Protein sequence

MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHEVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICNAVGIVSRYQSNQGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGRAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKYLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHIIADPFTKTLTT
Homology
BLAST of Cmc10g0282831 vs. NCBI nr
Match: KAA0042496.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 544.7 bits (1402), Expect = 4.8e-151
Identity = 274/281 (97.51%), Postives = 275/281 (97.86%), Query Frame = 0

Query: 1   MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHEVHLSKE 60
           MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRH VHLSKE
Sbjct: 1   MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 60

Query: 61  QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICNAVGIVSRYQSNQGLDHWTTVKII 120
           QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDIC AVGIVSRYQSN GLDHWT VKII
Sbjct: 61  QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKII 120

Query: 121 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGRAVVWRSIKQGC 180
           LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG AVVWRSIKQGC
Sbjct: 121 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 180

Query: 181 IADSTMEAEYVAACEAAKEAVWLRKYLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
           IADSTMEAEYVAACEAAKEAVWLRK+LHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK
Sbjct: 181 IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240

Query: 241 RGKHIERKYHLIREIVQRGDVIVTKIASEHIIADPFTKTLT 282
           RGKHIERKYHLIREIVQRGDVIVTKIASEH IADPFTKTLT
Sbjct: 241 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLT 281

BLAST of Cmc10g0282831 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 542.7 bits (1397), Expect = 1.8e-150
Identity = 272/281 (96.80%), Postives = 274/281 (97.51%), Query Frame = 0

Query: 1    MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHEVHLSKE 60
            MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRH VHLSKE
Sbjct: 936  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 995

Query: 61   QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICNAVGIVSRYQSNQGLDHWTTVKII 120
            QSPKTPQEVEDMRRIPYASAVGSLMY MLCTRPDIC AVGIVSRYQSN GLDHWT VKI+
Sbjct: 996  QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 1055

Query: 121  LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGRAVVWRSIKQGC 180
            LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG AVVWRSIKQGC
Sbjct: 1056 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 1115

Query: 181  IADSTMEAEYVAACEAAKEAVWLRKYLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
            IADSTMEAEYVAACEAAKEAVWLRK+LHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK
Sbjct: 1116 IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 1175

Query: 241  RGKHIERKYHLIREIVQRGDVIVTKIASEHIIADPFTKTLT 282
            RGKHIERKYHLIREIVQRGDVIVTKIASEH IADPFTKTLT
Sbjct: 1176 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLT 1216

BLAST of Cmc10g0282831 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 542.7 bits (1397), Expect = 1.8e-150
Identity = 272/281 (96.80%), Postives = 274/281 (97.51%), Query Frame = 0

Query: 1    MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHEVHLSKE 60
            MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRH VHLSKE
Sbjct: 810  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 869

Query: 61   QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICNAVGIVSRYQSNQGLDHWTTVKII 120
            QSPKTPQEVEDMRRIPYASAVGSLMY MLCTRPDIC AVGIVSRYQSN GLDHWT VKI+
Sbjct: 870  QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 929

Query: 121  LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGRAVVWRSIKQGC 180
            LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG AVVWRSIKQGC
Sbjct: 930  LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 989

Query: 181  IADSTMEAEYVAACEAAKEAVWLRKYLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
            IADSTMEAEYVAACEAAKEAVWLRK+LHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK
Sbjct: 990  IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 1049

Query: 241  RGKHIERKYHLIREIVQRGDVIVTKIASEHIIADPFTKTLT 282
            RGKHIERKYHLIREIVQRGDVIVTKIASEH IADPFTKTLT
Sbjct: 1050 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLT 1090

BLAST of Cmc10g0282831 vs. NCBI nr
Match: KAA0061170.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 539.7 bits (1389), Expect = 1.6e-149
Identity = 272/281 (96.80%), Postives = 273/281 (97.15%), Query Frame = 0

Query: 1   MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHEVHLSKE 60
           MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRH VHLSKE
Sbjct: 97  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 156

Query: 61  QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICNAVGIVSRYQSNQGLDHWTTVKII 120
           QSPKTPQEVEDMRRIPYASAVGSLMY MLCTRPDIC AVGIVSRYQSN GLDHWTTVKII
Sbjct: 157 QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKII 216

Query: 121 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGRAVVWRSIKQGC 180
           LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLN  AVVWRSIKQGC
Sbjct: 217 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNEGAVVWRSIKQGC 276

Query: 181 IADSTMEAEYVAACEAAKEAVWLRKYLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
           IADSTMEAEYVAACEAAKEAVWLRK+LHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK
Sbjct: 277 IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 336

Query: 241 RGKHIERKYHLIREIVQRGDVIVTKIASEHIIADPFTKTLT 282
           RGKHIERKYHLIREIVQRGDVIVTKIASEH IADPFTK LT
Sbjct: 337 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKILT 377

BLAST of Cmc10g0282831 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 535.4 bits (1378), Expect = 2.9e-148
Identity = 269/281 (95.73%), Postives = 272/281 (96.80%), Query Frame = 0

Query: 1    MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHEVHLSKE 60
            MKDLGE QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRH VHLSKE
Sbjct: 936  MKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 995

Query: 61   QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICNAVGIVSRYQSNQGLDHWTTVKII 120
            QSPKTPQEVEDMRRIPYASAVGSLMY MLCTRPDIC AVGIVSRYQSN GLDHWT VKII
Sbjct: 996  QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKII 1055

Query: 121  LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGRAVVWRSIKQGC 180
            LKYLRRTRDYMLVYGAKDLILTGYT+SDFQTDKDSRKSTS SVFTLNG AVVWRSIKQGC
Sbjct: 1056 LKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGC 1115

Query: 181  IADSTMEAEYVAACEAAKEAVWLRKYLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
            IADSTMEAEYVAACEAAKEAVWL+K+LHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK
Sbjct: 1116 IADSTMEAEYVAACEAAKEAVWLKKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 1175

Query: 241  RGKHIERKYHLIREIVQRGDVIVTKIASEHIIADPFTKTLT 282
            RGKHIERKYHLIREIVQRGDVIVTKIASEH IADPFTKTLT
Sbjct: 1176 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLT 1216

BLAST of Cmc10g0282831 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 6.5e-66
Identity = 130/280 (46.43%), Postives = 184/280 (65.71%), Query Frame = 0

Query: 1    MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHEVHLSKE 60
            MKDLG AQ +LG++I+R+R ++ L LSQ  YI+++L R++M+N+K    P    + LSK+
Sbjct: 1035 MKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKK 1094

Query: 61   QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICNAVGIVSRYQSNQGLDHWTTVKII 120
              P T +E  +M ++PY+SAVGSLMY M+CTRPDI +AVG+VSR+  N G +HW  VK I
Sbjct: 1095 MCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWI 1154

Query: 121  LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGRAVVWRSIKQGC 180
            L+YLR T    L +G  D IL GYTD+D   D D+RKS++G +FT +G A+ W+S  Q C
Sbjct: 1155 LRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKC 1214

Query: 181  IADSTMEAEYVAACEAAKEAVWLRKYLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
            +A ST EAEY+AA E  KE +WL+++L +L +         +YCD+  A+  SK    H 
Sbjct: 1215 VALSTTEAEYIAATETGKEMIWLKRFLQELGL---HQKEYVVYCDSQSAIDLSKNSMYHA 1274

Query: 241  RGKHIERKYHLIREIVQRGDVIVTKIASEHIIADPFTKTL 281
            R KHI+ +YH IRE+V    + V KI++    AD  TK +
Sbjct: 1275 RTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVV 1311

BLAST of Cmc10g0282831 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 176.0 bits (445), Expect = 5.9e-43
Identity = 101/284 (35.56%), Postives = 161/284 (56.69%), Query Frame = 0

Query: 1    MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHEVHLSKE 60
            M DL E ++ +GI+I  + +   + LSQ+ Y+ K+L +++M+N      P   +++    
Sbjct: 1114 MTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELL 1173

Query: 61   QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICNAVGIVSRYQSNQGLDHWTTVKII 120
             S       ++    P  S +G LMY+MLCTRPD+  AV I+SRY S    + W  +K +
Sbjct: 1174 NS-------DEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRV 1233

Query: 121  LKYLRRTRDYMLVYG---AKDLILTGYTDSDFQTDKDSRKSTSGSVFTL-NGRAVVWRSI 180
            L+YL+ T D  L++    A +  + GY DSD+   +  RKST+G +F + +   + W + 
Sbjct: 1234 LRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTK 1293

Query: 181  KQGCIADSTMEAEYVAACEAAKEAVWLRKYLHDLEVVPNMNLPITLYCDNSGAVANSKEP 240
            +Q  +A S+ EAEY+A  EA +EA+WL+  L  + +   +  PI +Y DN G ++ +  P
Sbjct: 1294 RQNSVAASSTEAEYMALFEAVREALWLKFLLTSINI--KLENPIKIYEDNQGCISIANNP 1353

Query: 241  RSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHIIADPFTKTL 281
              HKR KHI+ KYH  RE VQ   + +  I +E+ +AD FTK L
Sbjct: 1354 SCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPL 1386

BLAST of Cmc10g0282831 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.2e-30
Identity = 94/282 (33.33%), Postives = 134/282 (47.52%), Query Frame = 0

Query: 1    MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHEVHLSKE 60
            +K+  +  Y LGI+    R  + L LSQ  Y   LL R +M  +K    P      L+  
Sbjct: 1160 VKEHEDLHYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLH 1219

Query: 61   QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICNAVGIVSRYQSNQGLDHWTTVKII 120
               K P   E      Y   VGSL Y+   TRPD+  AV  +S+Y      DHW  +K +
Sbjct: 1220 SGTKLPDPTE------YRGIVGSLQYLAF-TRPDLSYAVNRLSQYMHMPTDDHWNALKRV 1279

Query: 121  LKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGRAVVWRSIKQG 180
            L+YL  T D+ + +     L L  Y+D+D+  D D   ST+G +  L    + W S KQ 
Sbjct: 1280 LRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQK 1339

Query: 181  CIADSTMEAEYVAACEAAKEAVWLRKYLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSH 240
             +  S+ EAEY +    + E  W+   L +L +   ++ P  +YCDN GA      P  H
Sbjct: 1340 GVVRSSTEAEYRSVANTSSELQWICSLLTELGI--QLSHPPVIYCDNVGATYLCANPVFH 1399

Query: 241  KRGKHIERKYHLIREIVQRGDVIVTKIASEHIIADPFTKTLT 282
             R KHI   YH IR  VQ G + V  +++   +AD  TK L+
Sbjct: 1400 SRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLS 1430

BLAST of Cmc10g0282831 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.0e-28
Identity = 64/133 (48.12%), Postives = 92/133 (69.17%), Query Frame = 0

Query: 72  MRRIPYASAVGSLMYVMLCTRPDICNAVGIVSRYQSNQGLDHWTTVKIILKYLRRTRDYM 131
           M+ +PY SAVG++MY+M+ TRPD+  AVG++S++ S+    HW  +K +L+YL+ T+ Y 
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 132 LVY-GAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGRAVVWRSIKQGCIADSTMEAEY 191
           L +  A    L GY+D+D+  D +SR+STSG +F LNG  V WRS KQ  +A S+ E EY
Sbjct: 61  LEFTRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEY 120

Query: 192 VAACEAAKEAVWL 204
           +A  EA +EAVWL
Sbjct: 121 MALSEATQEAVWL 133

BLAST of Cmc10g0282831 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 3.4e-14
Identity = 66/201 (32.84%), Postives = 88/201 (43.78%), Query Frame = 0

Query: 1   MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHEVHLSKE 60
           MKDLG+    LG+  I    N  + LS   YI K      +   K    P  +   L + 
Sbjct: 114 MKDLGKVDKFLGLN-IHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFET 173

Query: 61  QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICNAVGIVSRYQSNQGLDHWTTVKII 120
            SP     ++D+   PY S VG L++     RPDI   V ++SR+       H  + + +
Sbjct: 174 TSP----HLKDI--TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRV 233

Query: 121 LKYLRRTRDYMLVY-GAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGRAVVWRSIK-Q 180
           L+YL  TR   L Y     L LT Y D+      D   ST G V  L G  V W S K +
Sbjct: 234 LRYLYTTRSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLK 293

Query: 181 GCIADSTMEAEYVAACEAAKE 200
           G I   + EAEY+ A E   E
Sbjct: 294 GVIPVPSTEAEYITASETVME 307

BLAST of Cmc10g0282831 vs. ExPASy TrEMBL
Match: A0A5A7TKM4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold246G00470 PE=4 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 2.3e-151
Identity = 274/281 (97.51%), Postives = 275/281 (97.86%), Query Frame = 0

Query: 1   MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHEVHLSKE 60
           MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRH VHLSKE
Sbjct: 1   MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 60

Query: 61  QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICNAVGIVSRYQSNQGLDHWTTVKII 120
           QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDIC AVGIVSRYQSN GLDHWT VKII
Sbjct: 61  QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKII 120

Query: 121 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGRAVVWRSIKQGC 180
           LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG AVVWRSIKQGC
Sbjct: 121 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 180

Query: 181 IADSTMEAEYVAACEAAKEAVWLRKYLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
           IADSTMEAEYVAACEAAKEAVWLRK+LHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK
Sbjct: 181 IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240

Query: 241 RGKHIERKYHLIREIVQRGDVIVTKIASEHIIADPFTKTLT 282
           RGKHIERKYHLIREIVQRGDVIVTKIASEH IADPFTKTLT
Sbjct: 241 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLT 281

BLAST of Cmc10g0282831 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 8.9e-151
Identity = 272/281 (96.80%), Postives = 274/281 (97.51%), Query Frame = 0

Query: 1    MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHEVHLSKE 60
            MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRH VHLSKE
Sbjct: 936  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 995

Query: 61   QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICNAVGIVSRYQSNQGLDHWTTVKII 120
            QSPKTPQEVEDMRRIPYASAVGSLMY MLCTRPDIC AVGIVSRYQSN GLDHWT VKI+
Sbjct: 996  QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 1055

Query: 121  LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGRAVVWRSIKQGC 180
            LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG AVVWRSIKQGC
Sbjct: 1056 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 1115

Query: 181  IADSTMEAEYVAACEAAKEAVWLRKYLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
            IADSTMEAEYVAACEAAKEAVWLRK+LHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK
Sbjct: 1116 IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 1175

Query: 241  RGKHIERKYHLIREIVQRGDVIVTKIASEHIIADPFTKTLT 282
            RGKHIERKYHLIREIVQRGDVIVTKIASEH IADPFTKTLT
Sbjct: 1176 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLT 1216

BLAST of Cmc10g0282831 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 8.9e-151
Identity = 272/281 (96.80%), Postives = 274/281 (97.51%), Query Frame = 0

Query: 1    MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHEVHLSKE 60
            MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRH VHLSKE
Sbjct: 810  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 869

Query: 61   QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICNAVGIVSRYQSNQGLDHWTTVKII 120
            QSPKTPQEVEDMRRIPYASAVGSLMY MLCTRPDIC AVGIVSRYQSN GLDHWT VKI+
Sbjct: 870  QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 929

Query: 121  LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGRAVVWRSIKQGC 180
            LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG AVVWRSIKQGC
Sbjct: 930  LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 989

Query: 181  IADSTMEAEYVAACEAAKEAVWLRKYLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
            IADSTMEAEYVAACEAAKEAVWLRK+LHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK
Sbjct: 990  IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 1049

Query: 241  RGKHIERKYHLIREIVQRGDVIVTKIASEHIIADPFTKTLT 282
            RGKHIERKYHLIREIVQRGDVIVTKIASEH IADPFTKTLT
Sbjct: 1050 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLT 1090

BLAST of Cmc10g0282831 vs. ExPASy TrEMBL
Match: A0A5A7V1F5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00440 PE=4 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 7.5e-150
Identity = 272/281 (96.80%), Postives = 273/281 (97.15%), Query Frame = 0

Query: 1   MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHEVHLSKE 60
           MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRH VHLSKE
Sbjct: 97  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 156

Query: 61  QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICNAVGIVSRYQSNQGLDHWTTVKII 120
           QSPKTPQEVEDMRRIPYASAVGSLMY MLCTRPDIC AVGIVSRYQSN GLDHWTTVKII
Sbjct: 157 QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKII 216

Query: 121 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGRAVVWRSIKQGC 180
           LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLN  AVVWRSIKQGC
Sbjct: 217 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNEGAVVWRSIKQGC 276

Query: 181 IADSTMEAEYVAACEAAKEAVWLRKYLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
           IADSTMEAEYVAACEAAKEAVWLRK+LHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK
Sbjct: 277 IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 336

Query: 241 RGKHIERKYHLIREIVQRGDVIVTKIASEHIIADPFTKTLT 282
           RGKHIERKYHLIREIVQRGDVIVTKIASEH IADPFTK LT
Sbjct: 337 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKILT 377

BLAST of Cmc10g0282831 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.4e-148
Identity = 269/281 (95.73%), Postives = 272/281 (96.80%), Query Frame = 0

Query: 1    MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHEVHLSKE 60
            MKDLGE QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRH VHLSKE
Sbjct: 936  MKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 995

Query: 61   QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICNAVGIVSRYQSNQGLDHWTTVKII 120
            QSPKTPQEVEDMRRIPYASAVGSLMY MLCTRPDIC AVGIVSRYQSN GLDHWT VKII
Sbjct: 996  QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKII 1055

Query: 121  LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGRAVVWRSIKQGC 180
            LKYLRRTRDYMLVYGAKDLILTGYT+SDFQTDKDSRKSTS SVFTLNG AVVWRSIKQGC
Sbjct: 1056 LKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGC 1115

Query: 181  IADSTMEAEYVAACEAAKEAVWLRKYLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
            IADSTMEAEYVAACEAAKEAVWL+K+LHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK
Sbjct: 1116 IADSTMEAEYVAACEAAKEAVWLKKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 1175

Query: 241  RGKHIERKYHLIREIVQRGDVIVTKIASEHIIADPFTKTLT 282
            RGKHIERKYHLIREIVQRGDVIVTKIASEH IADPFTKTLT
Sbjct: 1176 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLT 1216

BLAST of Cmc10g0282831 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 112.1 bits (279), Expect = 7.4e-25
Identity = 79/255 (30.98%), Postives = 128/255 (50.20%), Query Frame = 0

Query: 1   MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHEVHLSKE 60
           ++DLG  +Y LG++I R      + + Q  Y   LL    +   K   +P    V  S  
Sbjct: 310 LRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 369

Query: 61  QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICNAVGIVSRYQSNQGLDHWTTVKII 120
                  +  D +   Y   +G LMY+ + TR DI  AV  +S++     L H   V  I
Sbjct: 370 SG----GDFVDAK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKI 429

Query: 121 LKYLRRTRDYMLVYGAK-DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGRAVVWRSIKQG 180
           L Y++ T    L Y ++ ++ L  ++D+ FQ+ KD+R+ST+G    L    + W+S KQ 
Sbjct: 430 LHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 489

Query: 181 CIADSTMEAEYVAACEAAKEAVWLRKYLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSH 240
            ++ S+ EAEY A   A  E +WL ++  +L++   ++ P  L+CDN+ A+  +     H
Sbjct: 490 VVSKSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFH 549

Query: 241 KRGKHIERKYHLIRE 255
           +R KHIE   H +RE
Sbjct: 550 ERTKHIESDCHSVRE 553

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0042496.14.8e-15197.51gag/pol protein [Cucumis melo var. makuwa][more]
KAA0025945.11.8e-15096.80gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi... [more]
KAA0059226.11.8e-15096.80gag/pol protein [Cucumis melo var. makuwa][more]
KAA0061170.11.6e-14996.80gag/pol protein [Cucumis melo var. makuwa][more]
KAA0035907.12.9e-14895.73gag/pol protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
P109786.5e-6646.43Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041465.9e-4335.56Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT941.2e-3033.33Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P0CV727.0e-2848.12Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P... [more]
P256003.4e-1432.84Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
Match NameE-valueIdentityDescription
A0A5A7TKM42.3e-15197.51Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold246G0047... [more]
A0A5A7TZD08.9e-15196.80Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000... [more]
A0A5A7UYE88.9e-15196.80Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015... [more]
A0A5A7V1F57.5e-15096.80Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G0044... [more]
A0A5A7T2V91.4e-14895.73Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760... [more]
Match NameE-valueIdentityDescription
AT4G23160.17.4e-2530.98cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 151..257
NoneNo IPR availablePANTHERPTHR11439:SF273RIBOSOME BIOGENESIS PROTEIN BOP1 HOMOLOGcoord: 151..257
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 142..282
e-value: 1.12054E-65
score: 200.002

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0282831.1Cmc10g0282831.1mRNA