Cmc10g0282051 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0282051
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
LocationCMiso1.1chr10: 21227288 .. 21228701 (-)
RNA-Seq ExpressionCmc10g0282051
SyntenyCmc10g0282051
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTTTGCGAGGAAATTGAGCAGTGTAAAACGGGGATTGTTCGTCCTGAAACTGGGCCGGTGCAAATGATGTTAAAGCAATTTGAAGATGTTTTTGAGTGGCCTGAGCAGCTTCCACCAAGGAGAAAGATTGAGCATCATATTCATTTGAAAGAGGGTACTAATCCCATCAATGTAAGACCATATAGATATGGTTATCAACAAAAGGCTGAAATGGAGAGATTGGTGGAAGAGATGTTATCGTCAGGGGTTATTCGGCCAAGTAATAGCCCTTTCTCGAGTCCGGTACTGTTGGTCAAAAAGAAAGATGGCAGCTGGCGTTTTTGTGTCGATTATCGTGCAGTAAACAATGTTACGATCCCTGATAAGTTTCCAATACCCGTGGCGAAAGAGTTATTTGATGAATTGCACGGAGGAACCATATTCTCAAAAATAGATCTCAAATCGAGGTATCATCAGATAAGAATGGTTGATGAGGACATTCATAAAACGGCCTTTCACACTCATGAGGGTCATTATGAATTTCTTGTTATGCCGTTTGGATTAACTAATGCTCCAACCACTTTTCAAGCCTTGATGAATACTATCTTCAAACTGTATTTGAGAAAGTTTGTTTTGGTATTCTTCGATGATATTTTGATTTACAGTAAAGATGAGAGAGACCATGCCGAGCATATTGAAAAGGTCTTTCTTACATTGAGAAGACATGCTTTATATGCTAATAAGAAAAAGTGTAGTTTTGCCCAGCAAAACATTGAATATTTGGGACATGTCATATCAGGGGAAGGAGTAGAAGTTGATCCTGATAAAATCAAAGCAATTGCTGACTGGCCATGTCCAACAAACATAAGAGAAGTTCGGGGATTCCTTGGGTTAACTGGTTACTATAGGAGGTTTGTTCAACATTGGCTCCATAGTTGCTCCTTTAACCCAATTACTTAAAAAAGGTGGATTTAAATGGAATGAAGAGGCTGAGGAAGCATTTTTGAAGTTGAAAACTGCAATGTTGACTTTACCGATGTTAGCATTACCTAGCTTTGACCATCCTTTTGAAATTGAAACAGATACTTCTGGTTACGGAGTGGATGCTGTGTTAGTTCAATCAAAAAGGCCCATTGCTTTCTACAGTCATACTCTGTCAATGAAGGATAGAGCTCGGCCAGCGTATGAACGTGAGTTGATGGCTGTTGTGCTGTCTGTACAACGATGGAGGCCTTATTTGCTGGGAGCGAAGTTTGTTGTAAAAACAGATCAGAAATCCCTTAAATTTCTGTTGGAGCAGAGAGTTGTTCAACCACAGTATCAAAAATGGGTATCTAAGTGGCTAGGATATTCATTTGAAGTGGTATATAAACCGGGTCTGGAAAATAAGGCAGTTGATGCCTTGTCGAGAAAACCTCCGGATATTTAG

mRNA sequence

ATGGAAGTTTGCGAGGAAATTGAGCAGTGTAAAACGGGGATTGTTCGTCCTGAAACTGGGCCGGTGCAAATGATGTTAAAGCAATTTGAAGATGTTTTTGAGTGGCCTGAGCAGCTTCCACCAAGGAGAAAGATTGAGCATCATATTCATTTGAAAGAGGGTACTAATCCCATCAATGTAAGACCATATAGATATGGTTATCAACAAAAGGCTGAAATGGAGAGATTGGTGGAAGAGATGTTATCGTCAGGGGTTATTCGGCCAAGTAATAGCCCTTTCTCGAGTCCGGTACTGTTGGTCAAAAAGAAAGATGGCAGCTGGCGTTTTTGTGTCGATTATCGTGCAGTAAACAATGTTACGATCCCTGATAAGTTTCCAATACCCGTGGCGAAAGAGTTATTTGATGAATTGCACGGAGGAACCATATTCTCAAAAATAGATCTCAAATCGAGGTATCATCAGATAAGAATGGTTGATGAGGACATTCATAAAACGGCCTTTCACACTCATGAGGGTCATTATGAATTTCTTGTTATGCCGTTTGGATTAACTAATGCTCCAACCACTTTTCAAGCCTTGATGAATACTATCTTCAAACTGTATTTGAGAAAGTTTGTTTTGGTATTCTTCGATGATATTTTGATTTACAGTAAAGATGAGAGAGACCATGCCGAGCATATTGAAAAGGTCTTTCTTACATTGAGAAGACATGCTTTATATGCTAATAAGAAAAAGTGTAGTTTTGCCCAGCAAAACATTGAATATTTGGGACATGTCATATCAGGGGAAGGAGTAGAAGTTGATCCTGATAAAATCAAAGCAATTGCTGACTGGCCATGTCCAACAAACATAAGAGAAGTTCGGGGATTCCTTGGGTTAACTGGTTACTATAGGAGGTTTGCTGAGGAAGCATTTTTGAAGTTGAAAACTGCAATGTTGACTTTACCGATGTTAGCATTACCTAGCTTTGACCATCCTTTTGAAATTGAAACAGATACTTCTGGTTACGGAGTGGATGCTGTGTTAGTTCAATCAAAAAGGCCCATTGCTTTCTACAGTCATACTCTGTCAATGAAGGATAGAGCTCGGCCAGCGTATGAACGTGAGTTGATGGCTGTTGTGCTGTCTGTACAACGATGGAGGCCTTATTTGCTGGGAGCGAAGTTTGTTGTAAAAACAGATCAGAAATCCCTTAAATTTCTGTTGGAGCAGAGAGTTGTTCAACCACAGTATCAAAAATGGGTATCTAAGTGGCTAGGATATTCATTTGAAGTGGTATATAAACCGGGTCTGGAAAATAAGGCAGTTGATGCCTTGTCGAGAAAACCTCCGGATATTTAG

Coding sequence (CDS)

ATGGAAGTTTGCGAGGAAATTGAGCAGTGTAAAACGGGGATTGTTCGTCCTGAAACTGGGCCGGTGCAAATGATGTTAAAGCAATTTGAAGATGTTTTTGAGTGGCCTGAGCAGCTTCCACCAAGGAGAAAGATTGAGCATCATATTCATTTGAAAGAGGGTACTAATCCCATCAATGTAAGACCATATAGATATGGTTATCAACAAAAGGCTGAAATGGAGAGATTGGTGGAAGAGATGTTATCGTCAGGGGTTATTCGGCCAAGTAATAGCCCTTTCTCGAGTCCGGTACTGTTGGTCAAAAAGAAAGATGGCAGCTGGCGTTTTTGTGTCGATTATCGTGCAGTAAACAATGTTACGATCCCTGATAAGTTTCCAATACCCGTGGCGAAAGAGTTATTTGATGAATTGCACGGAGGAACCATATTCTCAAAAATAGATCTCAAATCGAGGTATCATCAGATAAGAATGGTTGATGAGGACATTCATAAAACGGCCTTTCACACTCATGAGGGTCATTATGAATTTCTTGTTATGCCGTTTGGATTAACTAATGCTCCAACCACTTTTCAAGCCTTGATGAATACTATCTTCAAACTGTATTTGAGAAAGTTTGTTTTGGTATTCTTCGATGATATTTTGATTTACAGTAAAGATGAGAGAGACCATGCCGAGCATATTGAAAAGGTCTTTCTTACATTGAGAAGACATGCTTTATATGCTAATAAGAAAAAGTGTAGTTTTGCCCAGCAAAACATTGAATATTTGGGACATGTCATATCAGGGGAAGGAGTAGAAGTTGATCCTGATAAAATCAAAGCAATTGCTGACTGGCCATGTCCAACAAACATAAGAGAAGTTCGGGGATTCCTTGGGTTAACTGGTTACTATAGGAGGTTTGCTGAGGAAGCATTTTTGAAGTTGAAAACTGCAATGTTGACTTTACCGATGTTAGCATTACCTAGCTTTGACCATCCTTTTGAAATTGAAACAGATACTTCTGGTTACGGAGTGGATGCTGTGTTAGTTCAATCAAAAAGGCCCATTGCTTTCTACAGTCATACTCTGTCAATGAAGGATAGAGCTCGGCCAGCGTATGAACGTGAGTTGATGGCTGTTGTGCTGTCTGTACAACGATGGAGGCCTTATTTGCTGGGAGCGAAGTTTGTTGTAAAAACAGATCAGAAATCCCTTAAATTTCTGTTGGAGCAGAGAGTTGTTCAACCACAGTATCAAAAATGGGTATCTAAGTGGCTAGGATATTCATTTGAAGTGGTATATAAACCGGGTCTGGAAAATAAGGCAGTTGATGCCTTGTCGAGAAAACCTCCGGATATTTAG

Protein sequence

MEVCEEIEQCKTGIVRPETGPVQMMLKQFEDVFEWPEQLPPRRKIEHHIHLKEGTNPINVRPYRYGYQQKAEMERLVEEMLSSGVIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNVTIPDKFPIPVAKELFDELHGGTIFSKIDLKSRYHQIRMVDEDIHKTAFHTHEGHYEFLVMPFGLTNAPTTFQALMNTIFKLYLRKFVLVFFDDILIYSKDERDHAEHIEKVFLTLRRHALYANKKKCSFAQQNIEYLGHVISGEGVEVDPDKIKAIADWPCPTNIREVRGFLGLTGYYRRFAEEAFLKLKTAMLTLPMLALPSFDHPFEIETDTSGYGVDAVLVQSKRPIAFYSHTLSMKDRARPAYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVVQPQYQKWVSKWLGYSFEVVYKPGLENKAVDALSRKPPDI
Homology
BLAST of Cmc10g0282051 vs. NCBI nr
Match: KAA0049854.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK08666.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 794.3 bits (2050), Expect = 5.5e-226
Identity = 391/425 (92.00%), Postives = 394/425 (92.71%), Query Frame = 0

Query: 1   MEVCEEIEQCKTGIVRPETGPVQMMLKQFEDVFEWPEQLPPRRKIEHHIHLKEGTNPINV 60
           MEVCEEIEQCKTGIVRPET  VQMMLKQFEDVFEWPEQLPPRRKIEHHIHLKEGTNPINV
Sbjct: 22  MEVCEEIEQCKTGIVRPETRLVQMMLKQFEDVFEWPEQLPPRRKIEHHIHLKEGTNPINV 81

Query: 61  RPYRYGYQQKAEMERLVEEMLSSGVIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNVT 120
           RPYRYGYQQKAEMERLVEEMLSS VIRPSNSPFSSPVLLVKKKDGSWRFCVDYR VNNVT
Sbjct: 82  RPYRYGYQQKAEMERLVEEMLSSRVIRPSNSPFSSPVLLVKKKDGSWRFCVDYRTVNNVT 141

Query: 121 IPDKFPIPVAKELFDELHGGTIFSKIDLKSRYHQIRMVDEDIHKTAFHTHEGHYEFLVMP 180
           IPDKFPIPV +ELFDELHGGTIFSKIDLKSRYHQIRMVDEDIHKTAFHTHEGHYEFLVMP
Sbjct: 142 IPDKFPIPVVEELFDELHGGTIFSKIDLKSRYHQIRMVDEDIHKTAFHTHEGHYEFLVMP 201

Query: 181 FGLTNAPTTFQALMNTIFKLYLRKFVLVFFDDILIYSKDERDHAEHIEKVFLTLRRHALY 240
           FGLTNAPTTFQALMNTIFKLYLRKFVLVFFDDILIYSKDERDHAEHIEKVFLTLRRHALY
Sbjct: 202 FGLTNAPTTFQALMNTIFKLYLRKFVLVFFDDILIYSKDERDHAEHIEKVFLTLRRHALY 261

Query: 241 ANKKKCSFAQQNIEYLGHVISGEGVEVDPDKIKAIADWPCPTNIREVRGFLGLTGYYRRF 300
           ANKKKCSFAQQNIEYLGHVISGEGVEVDPDKIKAIADWPCPT IREV+GFLGLTGYYR  
Sbjct: 262 ANKKKCSFAQQNIEYLGHVISGEGVEVDPDKIKAIADWPCPTTIREVQGFLGLTGYYR-- 321

Query: 301 AEEAFLKLKTAMLTLPMLALPSFDHPFEIETDTSGYGVDAVLVQSKRPIAFYSHTLSMKD 360
                                SFDHPFEIETDTSGYGVDAVLVQSKRPIAFY HTLSM+D
Sbjct: 322 ---------------------SFDHPFEIETDTSGYGVDAVLVQSKRPIAFYGHTLSMRD 381

Query: 361 RARPAYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVVQPQYQKWVSKWLG 420
           RARPAYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVVQPQ QKWVSKWLG
Sbjct: 382 RARPAYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVVQPQNQKWVSKWLG 423

Query: 421 YSFEV 426
           YSFEV
Sbjct: 442 YSFEV 423

BLAST of Cmc10g0282051 vs. NCBI nr
Match: TYK02195.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 762.3 bits (1967), Expect = 2.3e-216
Identity = 370/471 (78.56%), Postives = 410/471 (87.05%), Query Frame = 0

Query: 1    MEVCEEIEQCKTGIVRPETGPVQMMLKQFEDVFEWPEQLPPRRKIEHHIHLKEGTNPINV 60
            ++V  E EQ  T +      P+Q +LKQFEDVF+WPE+LPPRR IEH IHLKEGTNPINV
Sbjct: 582  VQVHTENEQSSTAVTTIGDEPLQNVLKQFEDVFDWPERLPPRRGIEHQIHLKEGTNPINV 641

Query: 61   RPYRYGYQQKAEMERLVEEMLSSGVIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNVT 120
            RPYRYG+QQKAEMERLVEEML+SG+IRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNN T
Sbjct: 642  RPYRYGFQQKAEMERLVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNAT 701

Query: 121  IPDKFPIPVAKELFDELHGGTIFSKIDLKSRYHQIRMVDEDIHKTAFHTHEGHYEFLVMP 180
            IPDKFPIPVA+ELFDEL+G T+FSKIDLKS YHQIRM+D+DI KTAF THEGHYEFLVMP
Sbjct: 702  IPDKFPIPVAEELFDELNGATVFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMP 761

Query: 181  FGLTNAPTTFQALMNTIFKLYLRKFVLVFFDDILIYSKDERDHAEHIEKVFLTLRRHALY 240
            FGLTNAP TFQALMN+IF+ +LRKFVLVFFDDILIYSK+E+DH EHIEKVFL LR+H+L+
Sbjct: 762  FGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLF 821

Query: 241  ANKKKCSFAQQNIEYLGHVISGEGVEVDPDKIKAIADWPCPTNIREVRGFLGLTGYYRRF 300
            ANKKKC+F Q+ +EYLGH+ISGEGVEVD +KIKA+ADWPCPTNIREVRGFLGLTGYYRRF
Sbjct: 822  ANKKKCNFGQKKVEYLGHIISGEGVEVDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRF 881

Query: 301  -------------------------AEEAFLKLKTAMLTLPMLALPSFDHPFEIETDTSG 360
                                     AEE+F KLK+AM++LP LALP+F  PFEIETD SG
Sbjct: 882  VQHYGSIAAPLTQLLKKGGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDASG 941

Query: 361  YGVDAVLVQSKRPIAFYSHTLSMKDRARPAYERELMAVVLSVQRWRPYLLGAKFVVKTDQ 420
            +GV AVL+QSKRPIAFYSHTLSM+DRARP YERELMAVVLSVQRWRPYLLGAKFVVKTDQ
Sbjct: 942  FGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQ 1001

Query: 421  KSLKFLLEQRVVQPQYQKWVSKWLGYSFEVVYKPGLENKAVDALSRKPPDI 447
            KSLKFLLEQRV+QPQYQKW+SK LGYSFEVVYKPGLENKA DALSR+PPDI
Sbjct: 1002 KSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDI 1052

BLAST of Cmc10g0282051 vs. NCBI nr
Match: TYK23779.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 756.5 bits (1952), Expect = 1.3e-214
Identity = 365/456 (80.04%), Postives = 403/456 (88.38%), Query Frame = 0

Query: 16  RPETGPVQMMLKQFEDVFEWPEQLPPRRKIEHHIHLKEGTNPINVRPYRYGYQQKAEMER 75
           +P   P+Q +LKQFEDVF+WPE+LPPRR IEH IHLKEGT+PINVRPYRYG+QQKAEMER
Sbjct: 507 QPSDEPLQNVLKQFEDVFDWPERLPPRRGIEHQIHLKEGTDPINVRPYRYGFQQKAEMER 566

Query: 76  LVEEMLSSGVIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNVTIPDKFPIPVAKELFD 135
           LVEEML+SG+IRPSNSPFSSPVLLVKKKDGSWRFCVDYR VNN TIPDKFPIPVA+ELFD
Sbjct: 567 LVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRTVNNATIPDKFPIPVAEELFD 626

Query: 136 ELHGGTIFSKIDLKSRYHQIRMVDEDIHKTAFHTHEGHYEFLVMPFGLTNAPTTFQALMN 195
           EL+G TIFSKIDLKS YHQIRM+D+DI KTAF THEGHYEFLVMPFGLTNAPTTFQALMN
Sbjct: 627 ELNGATIFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPTTFQALMN 686

Query: 196 TIFKLYLRKFVLVFFDDILIYSKDERDHAEHIEKVFLTLRRHALYANKKKCSFAQQNIEY 255
           +IF+ +LRKFVLVFFDDILIYSK+E+DH EHIEKVFL LR+H+L+ANKKKC+F Q+ +EY
Sbjct: 687 SIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEY 746

Query: 256 LGHVISGEGVEVDPDKIKAIADWPCPTNIREVRGFLGLTGYYRRF--------------- 315
           LGH+ISGEGVEVD +KIK +ADWPCPTNIREVRGFLGLTGYYRRF               
Sbjct: 747 LGHIISGEGVEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLL 806

Query: 316 ----------AEEAFLKLKTAMLTLPMLALPSFDHPFEIETDTSGYGVDAVLVQSKRPIA 375
                     AEE+F KLK+AM++LP LALP+F  PFEIETD SG+GV AVL+QSKRPIA
Sbjct: 807 KKGGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIA 866

Query: 376 FYSHTLSMKDRARPAYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVVQPQ 435
           FYSHTLSM+DRARP YERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRV+QPQ
Sbjct: 867 FYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVIQPQ 926

Query: 436 YQKWVSKWLGYSFEVVYKPGLENKAVDALSRKPPDI 447
           YQKW+SK LGYSFEVVYKPGLENKA DALSR+PPDI
Sbjct: 927 YQKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDI 962

BLAST of Cmc10g0282051 vs. NCBI nr
Match: KAA0037097.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 755.4 bits (1949), Expect = 2.8e-214
Identity = 367/471 (77.92%), Postives = 408/471 (86.62%), Query Frame = 0

Query: 1   MEVCEEIEQCKTGIVRPETGPVQMMLKQFEDVFEWPEQLPPRRKIEHHIHLKEGTNPINV 60
           ++V  E EQ  T        P+Q +LKQFEDVF+WPE+LPPRR IEH IHLKEGTNPINV
Sbjct: 487 IQVHTENEQSSTAAATIGDEPLQNVLKQFEDVFDWPERLPPRRGIEHQIHLKEGTNPINV 546

Query: 61  RPYRYGYQQKAEMERLVEEMLSSGVIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNVT 120
           RPYRYG+QQKAEMERLVEEML+SG+IRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNN T
Sbjct: 547 RPYRYGFQQKAEMERLVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNAT 606

Query: 121 IPDKFPIPVAKELFDELHGGTIFSKIDLKSRYHQIRMVDEDIHKTAFHTHEGHYEFLVMP 180
           IPDKFPIPVA+ELFDEL+G T+FSKIDLKS YHQIRM+D+DI KTAF THEGHYEFLVMP
Sbjct: 607 IPDKFPIPVAEELFDELNGATVFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMP 666

Query: 181 FGLTNAPTTFQALMNTIFKLYLRKFVLVFFDDILIYSKDERDHAEHIEKVFLTLRRHALY 240
           FGLTNAP TFQALMN+IF+ +LRKFVLVFFDDILIYSK+E+DH EHIEKVFL LR+H+L+
Sbjct: 667 FGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLF 726

Query: 241 ANKKKCSFAQQNIEYLGHVISGEGVEVDPDKIKAIADWPCPTNIREVRGFLGLTGYYRRF 300
           ANKKKC+F Q+ +EYLGH+ISGEGVEVD  KIKA+ADWPCPTNIREVRGFLGLTGYYRRF
Sbjct: 727 ANKKKCNFGQKKVEYLGHIISGEGVEVDSKKIKAVADWPCPTNIREVRGFLGLTGYYRRF 786

Query: 301 -------------------------AEEAFLKLKTAMLTLPMLALPSFDHPFEIETDTSG 360
                                    A+E+F KLK+AM++LP LALP+F  PFEIETD SG
Sbjct: 787 VQHYGSIAAPLTQLLKKGGFKWNEDAKESFRKLKSAMMSLPTLALPNFTLPFEIETDASG 846

Query: 361 YGVDAVLVQSKRPIAFYSHTLSMKDRARPAYERELMAVVLSVQRWRPYLLGAKFVVKTDQ 420
           +GV+AVL+QSKRPIAFYSHTLSM+DRARP YERELMAVVLSVQRWRPYLLGAKFVVKTDQ
Sbjct: 847 FGVEAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQ 906

Query: 421 KSLKFLLEQRVVQPQYQKWVSKWLGYSFEVVYKPGLENKAVDALSRKPPDI 447
           KSLKFLLEQ+V+QPQYQKW+SK LGYSFEVVYKP LENKA DALSR+PPDI
Sbjct: 907 KSLKFLLEQQVIQPQYQKWLSKLLGYSFEVVYKPNLENKAADALSRRPPDI 957

BLAST of Cmc10g0282051 vs. NCBI nr
Match: KAA0066183.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK15223.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 755.0 bits (1948), Expect = 3.7e-214
Identity = 373/436 (85.55%), Postives = 389/436 (89.22%), Query Frame = 0

Query: 1   MEVCEEIEQCKTGIVRPETGPVQMMLKQFEDVFEWPEQLPPRRKIEHHIHLKEGTNPINV 60
           +EVCEEIEQC TG V  ETG VQMMLKQFEDVFEWP+++PPRRKIEHHIHLKEGTNPINV
Sbjct: 369 VEVCEEIEQCSTGTVHSETGLVQMMLKQFEDVFEWPKKIPPRRKIEHHIHLKEGTNPINV 428

Query: 61  RPYRYGYQQKAEMERLVEEMLSSGVIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNVT 120
           RPY YGYQQKAEME+LVEEMLSSGVIRPSNSPF SPVLLVKKKDGSWRFCVDYRAVNN T
Sbjct: 429 RPYIYGYQQKAEMEKLVEEMLSSGVIRPSNSPFLSPVLLVKKKDGSWRFCVDYRAVNNAT 488

Query: 121 IPDKFPIPVAKELFDELHGGTIFSKIDLKSRYHQIRMVDEDIHKTAFHTHEGHYEFLVMP 180
           IPDKFPIP+ +ELFDEL+G T+FSKIDLKS YHQIRMVDEDI KTAF THEGHYEFLVMP
Sbjct: 489 IPDKFPIPMVEELFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFCTHEGHYEFLVMP 548

Query: 181 FGLTNAPTTFQALMNTIFKLYLRKFVLVFFDDILIYSKDERDHAEHIEKVFLTLRRHALY 240
           FGLTNAPTTFQALMNTIFK YLRKFVLVFFDDILIYSKDERDH EHIE+VFL LRRHAL+
Sbjct: 549 FGLTNAPTTFQALMNTIFKPYLRKFVLVFFDDILIYSKDERDHIEHIERVFLALRRHALF 608

Query: 241 ANKKKCSFAQQNIEYLGHVISGEGVEVDPDKIKAIADWPCPTNIREVRGFLGLTGYYRRF 300
           ANKKKCSFAQQ IEYLGHVISGEGVEVDPDKIKA+ADWPCPTNIREVRGFLGLTGYY RF
Sbjct: 609 ANKKKCSFAQQKIEYLGHVISGEGVEVDPDKIKAVADWPCPTNIREVRGFLGLTGYYERF 668

Query: 301 -------------------------AEEAFLKLKTAMLTLPMLALPSFDHPFEIETDTSG 360
                                    AEEAFLKLK AMLTLP+LALPSF+HPFEIETD SG
Sbjct: 669 VQHYGSIAAPLTQLLKKGGFKWNEEAEEAFLKLKIAMLTLPVLALPSFNHPFEIETDASG 728

Query: 361 YGVDAVLVQSKRPIAFYSHTLSMKDRARPAYERELMAVVLSVQRWRPYLLGAKFVVKTDQ 412
           YGV AVLVQSKRPIAFYSHTL+M+DRARP YERELMAVVLSVQRWRPYLLGAKFVVKTDQ
Sbjct: 729 YGVGAVLVQSKRPIAFYSHTLAMRDRARPLYERELMAVVLSVQRWRPYLLGAKFVVKTDQ 788

BLAST of Cmc10g0282051 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.1e-82
Identity = 171/457 (37.42%), Postives = 256/457 (56.02%), Query Frame = 0

Query: 18  ETGPVQMMLKQFEDV-FEWPEQLPPRRKIEHHIHLKEGTNPINVRPYRYGYQQKAEMERL 77
           ET  ++ +L +F ++ ++  E+L     I+H ++     +PI  + Y      + E+E  
Sbjct: 167 ETFKLKGLLNKFRNLEYKEGEKLTFTNTIKHVLNTTH-NSPIYSKQYPLAQTHEIEVENQ 226

Query: 78  VEEMLSSGVIRPSNSPFSSPVLLVKKKD-----GSWRFCVDYRAVNNVTIPDKFPIPVAK 137
           V+EML+ G+IR SNSP++SP  +V KK        +R  +DYR +N +TIPD++PIP   
Sbjct: 227 VQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMD 286

Query: 138 ELFDELHGGTIFSKIDLKSRYHQIRMVDEDIHKTAFHTHEGHYEFLVMPFGLTNAPTTFQ 197
           E+  +L     F+ IDL   +HQI M +E I KTAF T  GHYE+L MPFGL NAP TFQ
Sbjct: 287 EILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQ 346

Query: 198 ALMNTIFKLYLRKFVLVFFDDILIYSKDERDHAEHIEKVFLTLRRHALYANKKKCSFAQQ 257
             MN I +  L K  LV+ DDI+I+S    +H   I+ VF  L    L     KC F ++
Sbjct: 347 RCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKK 406

Query: 258 NIEYLGHVISGEGVEVDPDKIKAIADWPCPTNIREVRGFLGLTGYYRRFAE--------- 317
              +LGH+++ +G++ +P K+KAI  +P PT  +E+R FLGLTGYYR+F           
Sbjct: 407 EANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPM 466

Query: 318 ------------------EAFLKLKTAMLTLPMLALPSFDHPFEIETDTSGYGVDAVLVQ 377
                             EAF KLK  ++  P+L LP F+  F + TD S   + AVL Q
Sbjct: 467 TSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQ 526

Query: 378 SKRPIAFYSHTLSMKDRARPAYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQ 437
           +  PI+F S TL+  +    A E+EL+A+V + + +R YLLG +F++ +D + L++L   
Sbjct: 527 NGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNL 586

Query: 438 RVVQPQYQKWVSKWLGYSFEVVYKPGLENKAVDALSR 442
           +    + ++W  +   Y F++ Y  G EN   DALSR
Sbjct: 587 KEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

BLAST of Cmc10g0282051 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 8.1e-79
Identity = 162/472 (34.32%), Postives = 257/472 (54.45%), Query Frame = 0

Query: 25  MLKQFEDVFEWPEQLPPRRKIEHHIHLKEGTN---PINVRPYRYGYQQKAEMERLVEEML 84
           +L +F  +FE P        +E  +  +  TN   PI  + Y Y    + E+ER ++E+L
Sbjct: 91  LLGEFPRIFEPPLS---GMSVETAVKAEIRTNTQDPIYAKSYPYPVNMRGEVERQIDELL 150

Query: 85  SSGVIRPSNSPFSSPVLLVKKK-----DGSWRFCVDYRAVNNVTIPDKFPIPVAKELFDE 144
             G+IRPSNSP++SP+ +V KK     +  +R  VD++ +N VTIPD +PIP        
Sbjct: 151 QDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLAS 210

Query: 145 LHGGTIFSKIDLKSRYHQIRMVDEDIHKTAFHTHEGHYEFLVMPFGLTNAPTTFQALMNT 204
           L     F+ +DL S +HQI M + DI KTAF T  G YEFL +PFGL NAP  FQ +++ 
Sbjct: 211 LGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDD 270

Query: 205 IFKLYLRKFVLVFFDDILIYSKDERDHAEHIEKVFLTLRRHALYANKKKCSFAQQNIEYL 264
           I + ++ K   V+ DDI+++S+D   H +++  V  +L +  L  N +K  F    +E+L
Sbjct: 271 ILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFL 330

Query: 265 GHVISGEGVEVDPDKIKAIADWPCPTNIREVRGFLGLTGYYRRF---------------- 324
           G++++ +G++ DP K++AI++ P PT+++E++ FLG+T YYR+F                
Sbjct: 331 GYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTR 390

Query: 325 ---------------------AEEAFLKLKTAMLTLPMLALPSFDHPFEIETDTSGYGVD 384
                                A ++F  LK+ + +  +LA P F  PF + TD S + + 
Sbjct: 391 GLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIG 450

Query: 385 AVLVQS----KRPIAFYSHTLSMKDRARPAYERELMAVVLSVQRWRPYLLGAKFV-VKTD 444
           AVL Q      RPIA+ S +L+  +      E+E++A++ S+   R YL GA  + V TD
Sbjct: 451 AVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTD 510

Query: 445 QKSLKFLLEQRVVQPQYQKWVSKWLGYSFEVVYKPGLENKAVDALSRKPPDI 447
            + L F L  R    + ++W ++   Y+ E++YKPG  N   DALSR PP +
Sbjct: 511 HQPLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGKSNVVADALSRIPPQL 559

BLAST of Cmc10g0282051 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.7e-76
Identity = 160/450 (35.56%), Postives = 247/450 (54.89%), Query Frame = 0

Query: 25  MLKQFEDV-FEWPEQLPPRRKIEHHIHLKEGTNPINVRPYRYGYQQKAEMERLVEEMLSS 84
           +L+++ D+ +   ++L    + +H I+ K      +   Y   Y+Q  E+E  +++ML+ 
Sbjct: 176 LLQKYHDIQYHEGDKLTFTNQTKHTINTKHNLPLYSKYSYPQAYEQ--EVESQIQDMLNQ 235

Query: 85  GVIRPSNSPFSSPVLLV-KKKDGS----WRFCVDYRAVNNVTIPDKFPIPVAKELFDELH 144
           G+IR SNSP++SP+ +V KK+D S    +R  +DYR +N +T+ D+ PIP   E+  +L 
Sbjct: 236 GIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLG 295

Query: 145 GGTIFSKIDLKSRYHQIRMVDEDIHKTAFHTHEGHYEFLVMPFGLTNAPTTFQALMNTIF 204
               F+ IDL   +HQI M  E + KTAF T  GHYE+L MPFGL NAP TFQ  MN I 
Sbjct: 296 RCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDIL 355

Query: 205 KLYLRKFVLVFFDDILIYSKDERDHAEHIEKVFLTLRRHALYANKKKCSFAQQNIEYLGH 264
           +  L K  LV+ DDI+++S    +H + +  VF  L +  L     KC F +Q   +LGH
Sbjct: 356 RPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGH 415

Query: 265 VISGEGVEVDPDKIKAIADWPCPTNIREVRGFLGLTGYYRRFA----------------- 324
           V++ +G++ +P+KI+AI  +P PT  +E++ FLGLTGYYR+F                  
Sbjct: 416 VLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKN 475

Query: 325 ----------EEAFLKLKTAMLTLPMLALPSFDHPFEIETDTSGYGVDAVLVQSKRPIAF 384
                     + AF KLK  +   P+L +P F   F + TD S   + AVL Q   P+++
Sbjct: 476 MKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDGHPLSY 535

Query: 385 YSHTLSMKDRARPAYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVVQPQY 442
            S TL+  +      E+EL+A+V + + +R YLLG  F + +D + L +L   +    + 
Sbjct: 536 ISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPNSKL 595

BLAST of Cmc10g0282051 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 267.3 bits (682), Expect = 3.1e-70
Identity = 155/439 (35.31%), Postives = 231/439 (52.62%), Query Frame = 0

Query: 39   LPPRR------KIEHHIHLKEGTNPINVRPYRYGYQQKAEMERLVEEMLSSGVIRPSNSP 98
            LPPR        ++H I +K G     ++PY    + + E+ ++V+++L +  I PS SP
Sbjct: 598  LPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP 657

Query: 99   FSSPVLLVKKKDGSWRFCVDYRAVNNVTIPDKFPIPVAKELFDELHGGTIFSKIDLKSRY 158
             SSPV+LV KKDG++R CVDYR +N  TI D FP+P    L   +    IF+ +DL S Y
Sbjct: 658  CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGY 717

Query: 159  HQIRMVDEDIHKTAFHTHEGHYEFLVMPFGLTNAPTTFQALMNTIFKLYLRKFVLVFFDD 218
            HQI M  +D +KTAF T  G YE+ VMPFGL NAP+TF   M   F+    +FV V+ DD
Sbjct: 718  HQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDD 777

Query: 219  ILIYSKDERDHAEHIEKVFLTLRRHALYANKKKCSFAQQNIEYLGHVISGEGVEVDPDKI 278
            ILI+S+   +H +H++ V   L+   L   KKKC FA +  E+LG+ I  + +     K 
Sbjct: 778  ILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKC 837

Query: 279  KAIADWPCPTNIREVRGFLGLTGYYRRF------------------------AEEAFLKL 338
             AI D+P P  +++ + FLG+  YYRRF                         ++A  KL
Sbjct: 838  AAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQDKAIEKL 897

Query: 339  KTAMLTLPMLALPSFDHPFEIETDTSGYGVDAVL--VQSKRP----IAFYSHTLSMKDRA 398
            K A+   P+L   +    + + TD S  G+ AVL  V +K      + ++S +L    + 
Sbjct: 898  KAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKN 957

Query: 399  RPAYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVVQPQYQKWVSKWLGYS 442
             PA E EL+ ++ ++  +R  L G  F ++TD  SL  L  +     + Q+W+     Y 
Sbjct: 958  YPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYD 1017

BLAST of Cmc10g0282051 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 266.5 bits (680), Expect = 5.3e-70
Identity = 155/439 (35.31%), Postives = 231/439 (52.62%), Query Frame = 0

Query: 39   LPPRR------KIEHHIHLKEGTNPINVRPYRYGYQQKAEMERLVEEMLSSGVIRPSNSP 98
            LPPR        ++H I +K G     ++PY    + + E+ ++V+++L +  I PS SP
Sbjct: 572  LPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP 631

Query: 99   FSSPVLLVKKKDGSWRFCVDYRAVNNVTIPDKFPIPVAKELFDELHGGTIFSKIDLKSRY 158
             SSPV+LV KKDG++R CVDYR +N  TI D FP+P    L   +    IF+ +DL S Y
Sbjct: 632  CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGY 691

Query: 159  HQIRMVDEDIHKTAFHTHEGHYEFLVMPFGLTNAPTTFQALMNTIFKLYLRKFVLVFFDD 218
            HQI M  +D +KTAF T  G YE+ VMPFGL NAP+TF   M   F+    +FV V+ DD
Sbjct: 692  HQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDD 751

Query: 219  ILIYSKDERDHAEHIEKVFLTLRRHALYANKKKCSFAQQNIEYLGHVISGEGVEVDPDKI 278
            ILI+S+   +H +H++ V   L+   L   KKKC FA +  E+LG+ I  + +     K 
Sbjct: 752  ILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKC 811

Query: 279  KAIADWPCPTNIREVRGFLGLTGYYRRF------------------------AEEAFLKL 338
             AI D+P P  +++ + FLG+  YYRRF                         ++A  KL
Sbjct: 812  AAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQDKAIDKL 871

Query: 339  KTAMLTLPMLALPSFDHPFEIETDTSGYGVDAVL--VQSKRP----IAFYSHTLSMKDRA 398
            K A+   P+L   +    + + TD S  G+ AVL  V +K      + ++S +L    + 
Sbjct: 872  KDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKN 931

Query: 399  RPAYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVVQPQYQKWVSKWLGYS 442
             PA E EL+ ++ ++  +R  L G  F ++TD  SL  L  +     + Q+W+     Y 
Sbjct: 932  YPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYD 991

BLAST of Cmc10g0282051 vs. ExPASy TrEMBL
Match: A0A5A7U3M5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold118G00090 PE=4 SV=1)

HSP 1 Score: 794.3 bits (2050), Expect = 2.7e-226
Identity = 391/425 (92.00%), Postives = 394/425 (92.71%), Query Frame = 0

Query: 1   MEVCEEIEQCKTGIVRPETGPVQMMLKQFEDVFEWPEQLPPRRKIEHHIHLKEGTNPINV 60
           MEVCEEIEQCKTGIVRPET  VQMMLKQFEDVFEWPEQLPPRRKIEHHIHLKEGTNPINV
Sbjct: 22  MEVCEEIEQCKTGIVRPETRLVQMMLKQFEDVFEWPEQLPPRRKIEHHIHLKEGTNPINV 81

Query: 61  RPYRYGYQQKAEMERLVEEMLSSGVIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNVT 120
           RPYRYGYQQKAEMERLVEEMLSS VIRPSNSPFSSPVLLVKKKDGSWRFCVDYR VNNVT
Sbjct: 82  RPYRYGYQQKAEMERLVEEMLSSRVIRPSNSPFSSPVLLVKKKDGSWRFCVDYRTVNNVT 141

Query: 121 IPDKFPIPVAKELFDELHGGTIFSKIDLKSRYHQIRMVDEDIHKTAFHTHEGHYEFLVMP 180
           IPDKFPIPV +ELFDELHGGTIFSKIDLKSRYHQIRMVDEDIHKTAFHTHEGHYEFLVMP
Sbjct: 142 IPDKFPIPVVEELFDELHGGTIFSKIDLKSRYHQIRMVDEDIHKTAFHTHEGHYEFLVMP 201

Query: 181 FGLTNAPTTFQALMNTIFKLYLRKFVLVFFDDILIYSKDERDHAEHIEKVFLTLRRHALY 240
           FGLTNAPTTFQALMNTIFKLYLRKFVLVFFDDILIYSKDERDHAEHIEKVFLTLRRHALY
Sbjct: 202 FGLTNAPTTFQALMNTIFKLYLRKFVLVFFDDILIYSKDERDHAEHIEKVFLTLRRHALY 261

Query: 241 ANKKKCSFAQQNIEYLGHVISGEGVEVDPDKIKAIADWPCPTNIREVRGFLGLTGYYRRF 300
           ANKKKCSFAQQNIEYLGHVISGEGVEVDPDKIKAIADWPCPT IREV+GFLGLTGYYR  
Sbjct: 262 ANKKKCSFAQQNIEYLGHVISGEGVEVDPDKIKAIADWPCPTTIREVQGFLGLTGYYR-- 321

Query: 301 AEEAFLKLKTAMLTLPMLALPSFDHPFEIETDTSGYGVDAVLVQSKRPIAFYSHTLSMKD 360
                                SFDHPFEIETDTSGYGVDAVLVQSKRPIAFY HTLSM+D
Sbjct: 322 ---------------------SFDHPFEIETDTSGYGVDAVLVQSKRPIAFYGHTLSMRD 381

Query: 361 RARPAYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVVQPQYQKWVSKWLG 420
           RARPAYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVVQPQ QKWVSKWLG
Sbjct: 382 RARPAYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVVQPQNQKWVSKWLG 423

Query: 421 YSFEV 426
           YSFEV
Sbjct: 442 YSFEV 423

BLAST of Cmc10g0282051 vs. ExPASy TrEMBL
Match: A0A5D3BSP2 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00980 PE=4 SV=1)

HSP 1 Score: 762.3 bits (1967), Expect = 1.1e-216
Identity = 370/471 (78.56%), Postives = 410/471 (87.05%), Query Frame = 0

Query: 1    MEVCEEIEQCKTGIVRPETGPVQMMLKQFEDVFEWPEQLPPRRKIEHHIHLKEGTNPINV 60
            ++V  E EQ  T +      P+Q +LKQFEDVF+WPE+LPPRR IEH IHLKEGTNPINV
Sbjct: 582  VQVHTENEQSSTAVTTIGDEPLQNVLKQFEDVFDWPERLPPRRGIEHQIHLKEGTNPINV 641

Query: 61   RPYRYGYQQKAEMERLVEEMLSSGVIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNVT 120
            RPYRYG+QQKAEMERLVEEML+SG+IRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNN T
Sbjct: 642  RPYRYGFQQKAEMERLVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNAT 701

Query: 121  IPDKFPIPVAKELFDELHGGTIFSKIDLKSRYHQIRMVDEDIHKTAFHTHEGHYEFLVMP 180
            IPDKFPIPVA+ELFDEL+G T+FSKIDLKS YHQIRM+D+DI KTAF THEGHYEFLVMP
Sbjct: 702  IPDKFPIPVAEELFDELNGATVFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMP 761

Query: 181  FGLTNAPTTFQALMNTIFKLYLRKFVLVFFDDILIYSKDERDHAEHIEKVFLTLRRHALY 240
            FGLTNAP TFQALMN+IF+ +LRKFVLVFFDDILIYSK+E+DH EHIEKVFL LR+H+L+
Sbjct: 762  FGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLF 821

Query: 241  ANKKKCSFAQQNIEYLGHVISGEGVEVDPDKIKAIADWPCPTNIREVRGFLGLTGYYRRF 300
            ANKKKC+F Q+ +EYLGH+ISGEGVEVD +KIKA+ADWPCPTNIREVRGFLGLTGYYRRF
Sbjct: 822  ANKKKCNFGQKKVEYLGHIISGEGVEVDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRF 881

Query: 301  -------------------------AEEAFLKLKTAMLTLPMLALPSFDHPFEIETDTSG 360
                                     AEE+F KLK+AM++LP LALP+F  PFEIETD SG
Sbjct: 882  VQHYGSIAAPLTQLLKKGGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDASG 941

Query: 361  YGVDAVLVQSKRPIAFYSHTLSMKDRARPAYERELMAVVLSVQRWRPYLLGAKFVVKTDQ 420
            +GV AVL+QSKRPIAFYSHTLSM+DRARP YERELMAVVLSVQRWRPYLLGAKFVVKTDQ
Sbjct: 942  FGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQ 1001

Query: 421  KSLKFLLEQRVVQPQYQKWVSKWLGYSFEVVYKPGLENKAVDALSRKPPDI 447
            KSLKFLLEQRV+QPQYQKW+SK LGYSFEVVYKPGLENKA DALSR+PPDI
Sbjct: 1002 KSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDI 1052

BLAST of Cmc10g0282051 vs. ExPASy TrEMBL
Match: A0A5D3DKH5 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G001060 PE=4 SV=1)

HSP 1 Score: 756.5 bits (1952), Expect = 6.2e-215
Identity = 365/456 (80.04%), Postives = 403/456 (88.38%), Query Frame = 0

Query: 16  RPETGPVQMMLKQFEDVFEWPEQLPPRRKIEHHIHLKEGTNPINVRPYRYGYQQKAEMER 75
           +P   P+Q +LKQFEDVF+WPE+LPPRR IEH IHLKEGT+PINVRPYRYG+QQKAEMER
Sbjct: 507 QPSDEPLQNVLKQFEDVFDWPERLPPRRGIEHQIHLKEGTDPINVRPYRYGFQQKAEMER 566

Query: 76  LVEEMLSSGVIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNVTIPDKFPIPVAKELFD 135
           LVEEML+SG+IRPSNSPFSSPVLLVKKKDGSWRFCVDYR VNN TIPDKFPIPVA+ELFD
Sbjct: 567 LVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRTVNNATIPDKFPIPVAEELFD 626

Query: 136 ELHGGTIFSKIDLKSRYHQIRMVDEDIHKTAFHTHEGHYEFLVMPFGLTNAPTTFQALMN 195
           EL+G TIFSKIDLKS YHQIRM+D+DI KTAF THEGHYEFLVMPFGLTNAPTTFQALMN
Sbjct: 627 ELNGATIFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPTTFQALMN 686

Query: 196 TIFKLYLRKFVLVFFDDILIYSKDERDHAEHIEKVFLTLRRHALYANKKKCSFAQQNIEY 255
           +IF+ +LRKFVLVFFDDILIYSK+E+DH EHIEKVFL LR+H+L+ANKKKC+F Q+ +EY
Sbjct: 687 SIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEY 746

Query: 256 LGHVISGEGVEVDPDKIKAIADWPCPTNIREVRGFLGLTGYYRRF--------------- 315
           LGH+ISGEGVEVD +KIK +ADWPCPTNIREVRGFLGLTGYYRRF               
Sbjct: 747 LGHIISGEGVEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLL 806

Query: 316 ----------AEEAFLKLKTAMLTLPMLALPSFDHPFEIETDTSGYGVDAVLVQSKRPIA 375
                     AEE+F KLK+AM++LP LALP+F  PFEIETD SG+GV AVL+QSKRPIA
Sbjct: 807 KKGGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIA 866

Query: 376 FYSHTLSMKDRARPAYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVVQPQ 435
           FYSHTLSM+DRARP YERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRV+QPQ
Sbjct: 867 FYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVIQPQ 926

Query: 436 YQKWVSKWLGYSFEVVYKPGLENKAVDALSRKPPDI 447
           YQKW+SK LGYSFEVVYKPGLENKA DALSR+PPDI
Sbjct: 927 YQKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDI 962

BLAST of Cmc10g0282051 vs. ExPASy TrEMBL
Match: A0A5A7T6B1 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G002030 PE=4 SV=1)

HSP 1 Score: 755.4 bits (1949), Expect = 1.4e-214
Identity = 367/471 (77.92%), Postives = 408/471 (86.62%), Query Frame = 0

Query: 1   MEVCEEIEQCKTGIVRPETGPVQMMLKQFEDVFEWPEQLPPRRKIEHHIHLKEGTNPINV 60
           ++V  E EQ  T        P+Q +LKQFEDVF+WPE+LPPRR IEH IHLKEGTNPINV
Sbjct: 487 IQVHTENEQSSTAAATIGDEPLQNVLKQFEDVFDWPERLPPRRGIEHQIHLKEGTNPINV 546

Query: 61  RPYRYGYQQKAEMERLVEEMLSSGVIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNVT 120
           RPYRYG+QQKAEMERLVEEML+SG+IRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNN T
Sbjct: 547 RPYRYGFQQKAEMERLVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNAT 606

Query: 121 IPDKFPIPVAKELFDELHGGTIFSKIDLKSRYHQIRMVDEDIHKTAFHTHEGHYEFLVMP 180
           IPDKFPIPVA+ELFDEL+G T+FSKIDLKS YHQIRM+D+DI KTAF THEGHYEFLVMP
Sbjct: 607 IPDKFPIPVAEELFDELNGATVFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMP 666

Query: 181 FGLTNAPTTFQALMNTIFKLYLRKFVLVFFDDILIYSKDERDHAEHIEKVFLTLRRHALY 240
           FGLTNAP TFQALMN+IF+ +LRKFVLVFFDDILIYSK+E+DH EHIEKVFL LR+H+L+
Sbjct: 667 FGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLF 726

Query: 241 ANKKKCSFAQQNIEYLGHVISGEGVEVDPDKIKAIADWPCPTNIREVRGFLGLTGYYRRF 300
           ANKKKC+F Q+ +EYLGH+ISGEGVEVD  KIKA+ADWPCPTNIREVRGFLGLTGYYRRF
Sbjct: 727 ANKKKCNFGQKKVEYLGHIISGEGVEVDSKKIKAVADWPCPTNIREVRGFLGLTGYYRRF 786

Query: 301 -------------------------AEEAFLKLKTAMLTLPMLALPSFDHPFEIETDTSG 360
                                    A+E+F KLK+AM++LP LALP+F  PFEIETD SG
Sbjct: 787 VQHYGSIAAPLTQLLKKGGFKWNEDAKESFRKLKSAMMSLPTLALPNFTLPFEIETDASG 846

Query: 361 YGVDAVLVQSKRPIAFYSHTLSMKDRARPAYERELMAVVLSVQRWRPYLLGAKFVVKTDQ 420
           +GV+AVL+QSKRPIAFYSHTLSM+DRARP YERELMAVVLSVQRWRPYLLGAKFVVKTDQ
Sbjct: 847 FGVEAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQ 906

Query: 421 KSLKFLLEQRVVQPQYQKWVSKWLGYSFEVVYKPGLENKAVDALSRKPPDI 447
           KSLKFLLEQ+V+QPQYQKW+SK LGYSFEVVYKP LENKA DALSR+PPDI
Sbjct: 907 KSLKFLLEQQVIQPQYQKWLSKLLGYSFEVVYKPNLENKAADALSRRPPDI 957

BLAST of Cmc10g0282051 vs. ExPASy TrEMBL
Match: A0A5D3CTJ7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G001050 PE=4 SV=1)

HSP 1 Score: 755.0 bits (1948), Expect = 1.8e-214
Identity = 373/436 (85.55%), Postives = 389/436 (89.22%), Query Frame = 0

Query: 1   MEVCEEIEQCKTGIVRPETGPVQMMLKQFEDVFEWPEQLPPRRKIEHHIHLKEGTNPINV 60
           +EVCEEIEQC TG V  ETG VQMMLKQFEDVFEWP+++PPRRKIEHHIHLKEGTNPINV
Sbjct: 369 VEVCEEIEQCSTGTVHSETGLVQMMLKQFEDVFEWPKKIPPRRKIEHHIHLKEGTNPINV 428

Query: 61  RPYRYGYQQKAEMERLVEEMLSSGVIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNVT 120
           RPY YGYQQKAEME+LVEEMLSSGVIRPSNSPF SPVLLVKKKDGSWRFCVDYRAVNN T
Sbjct: 429 RPYIYGYQQKAEMEKLVEEMLSSGVIRPSNSPFLSPVLLVKKKDGSWRFCVDYRAVNNAT 488

Query: 121 IPDKFPIPVAKELFDELHGGTIFSKIDLKSRYHQIRMVDEDIHKTAFHTHEGHYEFLVMP 180
           IPDKFPIP+ +ELFDEL+G T+FSKIDLKS YHQIRMVDEDI KTAF THEGHYEFLVMP
Sbjct: 489 IPDKFPIPMVEELFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFCTHEGHYEFLVMP 548

Query: 181 FGLTNAPTTFQALMNTIFKLYLRKFVLVFFDDILIYSKDERDHAEHIEKVFLTLRRHALY 240
           FGLTNAPTTFQALMNTIFK YLRKFVLVFFDDILIYSKDERDH EHIE+VFL LRRHAL+
Sbjct: 549 FGLTNAPTTFQALMNTIFKPYLRKFVLVFFDDILIYSKDERDHIEHIERVFLALRRHALF 608

Query: 241 ANKKKCSFAQQNIEYLGHVISGEGVEVDPDKIKAIADWPCPTNIREVRGFLGLTGYYRRF 300
           ANKKKCSFAQQ IEYLGHVISGEGVEVDPDKIKA+ADWPCPTNIREVRGFLGLTGYY RF
Sbjct: 609 ANKKKCSFAQQKIEYLGHVISGEGVEVDPDKIKAVADWPCPTNIREVRGFLGLTGYYERF 668

Query: 301 -------------------------AEEAFLKLKTAMLTLPMLALPSFDHPFEIETDTSG 360
                                    AEEAFLKLK AMLTLP+LALPSF+HPFEIETD SG
Sbjct: 669 VQHYGSIAAPLTQLLKKGGFKWNEEAEEAFLKLKIAMLTLPVLALPSFNHPFEIETDASG 728

Query: 361 YGVDAVLVQSKRPIAFYSHTLSMKDRARPAYERELMAVVLSVQRWRPYLLGAKFVVKTDQ 412
           YGV AVLVQSKRPIAFYSHTL+M+DRARP YERELMAVVLSVQRWRPYLLGAKFVVKTDQ
Sbjct: 729 YGVGAVLVQSKRPIAFYSHTLAMRDRARPLYERELMAVVLSVQRWRPYLLGAKFVVKTDQ 788

BLAST of Cmc10g0282051 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 109.0 bits (271), Expect = 1.0e-23
Identity = 58/129 (44.96%), Postives = 70/129 (54.26%), Query Frame = 0

Query: 226 HIEKVFLTLRRHALYANKKKCSFAQQNIEYLG--HVISGEGVEVDPDKIKAIADWPCPTN 285
           H+  V     +H  YAN+KKC+F Q  I YLG  H+ISGEGV  DP K++A+  WP P N
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 286 IREVRGFLGLTGYYRRFAEE-------------------------AFLKLKTAMLTLPML 328
             E+RGFLGLTGYYRRF +                          AF  LK A+ TLP+L
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLPVL 122

BLAST of Cmc10g0282051 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 48.1 bits (113), Expect = 2.1e-05
Identity = 20/39 (51.28%), Postives = 30/39 (76.92%), Query Frame = 0

Query: 69  QKAEMERLVEEMLSSGVIRPSNSPFSSPVLLVKKKDGSW 108
           ++  ++  + EML + +I+PS SP+SSPVLLV+KKDG W
Sbjct: 41  RRTRLKNWLGEMLEARIIQPSISPYSSPVLLVQKKDGGW 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0049854.15.5e-22692.00reverse transcriptase [Cucumis melo var. makuwa] >TYK08666.1 reverse transcripta... [more]
TYK02195.12.3e-21678.56Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
TYK23779.11.3e-21480.04Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0037097.12.8e-21477.92Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa][more]
KAA0066183.13.7e-21485.55Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK15223.1 Ty3/gyp... [more]
Match NameE-valueIdentityDescription
P208252.1e-8237.42Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... [more]
Q8I7P98.1e-7934.32Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... [more]
P043231.7e-7635.56Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
Q7LHG53.1e-7035.31Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Q993155.3e-7035.31Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Match NameE-valueIdentityDescription
A0A5A7U3M52.7e-22692.00Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11... [more]
A0A5D3BSP21.1e-21678.56Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3DKH56.2e-21580.04Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7T6B11.4e-21477.92Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5D3CTJ71.8e-21485.55Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
Match NameE-valueIdentityDescription
ATMG00860.11.0e-2344.96DNA/RNA polymerases superfamily protein [more]
ATMG00850.12.1e-0551.28DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 125..260
e-value: 1.5E-92
score: 310.7
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 270..303
e-value: 2.3E-9
score: 39.2
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 45..185
e-value: 1.5E-92
score: 310.7
NoneNo IPR availableGENE3D3.10.20.370coord: 323..393
e-value: 7.9E-9
score: 37.4
NoneNo IPR availablePANTHERPTHR24559:SF319SUBFAMILY NOT NAMEDcoord: 303..393
coord: 21..211
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 303..393
coord: 21..211
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 328..443
e-value: 2.83518E-42
score: 143.787
NoneNo IPR availableCDDcd01647RT_LTRcoord: 84..260
e-value: 3.38727E-91
score: 272.161
IPR041577Reverse transcriptase/retrotransposon-derived protein, RNase H-like domainPFAMPF17919RT_RNaseH_2coord: 302..391
e-value: 8.6E-26
score: 89.9
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 100..259
e-value: 5.5E-29
score: 101.3
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 81..260
score: 15.127812
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 26..428

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0282051.1Cmc10g0282051.1mRNA