Cmc10g0281931 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0281931
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
LocationCMiso1.1chr10: 20889407 .. 20890849 (+)
RNA-Seq ExpressionCmc10g0281931
SyntenyCmc10g0281931
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTGCCTTAAAGAGACGAGAGGTGGTCTATTCTTCGATCCACAAGAAAATAGAGTGTTTGTATCGATAAATGCTACTTTCTTGGAAGAAGACCACATGAGAGATCATAAACCACGAAGAAAATTAGTATTAAATGAAGCTACTGATGAATCAACAAGGGATGTTGATGAAGTTGGTCCCTCATCAAAAGTTGATGAAACCACCACATCGGGTCAATCTCATCCTTCTCAATCATTGAGAATGCCTCGACGCAGTGGGAGGATTGTATCACAACCTAACCGTTATTTGGGTTTAACTGAAACTCATGTTGTCATACTAGATAATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGATCTTGAAATTGAGTCTATGTACTTCAATTCAGTGTGGGAGGTTGTAGATCTATCTGAAGGGGTAAAACCTATAGGGTGTAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTATAGACCTTCAAAGCTAGACTTGTAGCAAAAGTGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTTTCCCCTGTTGCTATGTTAAAGTCTATAAGGATTCTTTTGTCCATCGCCGCATTTTATAATTATGAAATATGGAAAATGGATGTCAAGACTGCTTTTCTGAATGACAATCTTGAAGAGATTATCTTTATATCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTCAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTACGGTTTTGACCAAAACGTTGATGAACCTTGTGTATATAAGAAAAACAATAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTAGACGATATCCTCCTCATTGAGAATGATGTGGGATACCTTACTGACGTTAAAGCTTGGCTAGTAGCCCAATTCCAAATAAAAGATTTAGGAGAGGCACAATATGTTCTTGGAATCCAAATCATAAGGGATCGTAAGAAAAAAATGCTAGCACTGTCTCAAGCAACCTATATTGACAAAATGTTGGTCCGATATTTGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAATATATGAGACGTATTCTCTATGCCTTAGCTGTGGGCAGCTTAATGTATGTCATGCTCTGTATTAAGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCTAACCTAGGGTTAGACCATTGGACGACAGTTAAAATTATTCTAAGTATCTTAGGAGAATGA

mRNA sequence

ATGTTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTGCCTTAAAGAGACGAGAGGTGGTCTATTCTTCGATCCACAAGAAAATAGAGTGTTTGTATCGATAAATGCTACTTTCTTGGAAGAAGACCACATGAGAGATCATAAACCACGAAGAAAATTAGTATTAAATGAAGCTACTGATGAATCAACAAGGGATGTTGATGAAGTTGGTCCCTCATCAAAAGTTGATGAAACCACCACATCGGGTCAATCTCATCCTTCTCAATCATTGAGAATGCCTCGACGCAGTGGGAGGATTGTATCACAACCTAACCGTTATTTGGGTTTAACTGAAACTCATGTTGTCATACTAGATAATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGATCTTGAAATTGAGTCTATGTACTTCAATTCAGTGTGGGAGACCTTCAAAGCTAGACTTGTAGCAAAAGTGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTTTCCCCTGTTGCTATGTTAAAGTCTATAAGGATTCTTTTGTCCATCGCCGCATTTTATAATTATGAAATATGGAAAATGGATGTCAAGACTGCTTTTCTGAATGACAATCTTGAAGAGATTATCTTTATATCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTCAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTACGGTTTTGACCAAAACGTTGATGAACCTTGTGTATATAAGAAAAACAATAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTAGACGATATCCTCCTCATTGAGAATGATGTGGGATACCTTACTGACGTTAAAGCTTGGCTAGTAGCCCAATTCCAAATAAAAGATTTAGGAGAGGCACAATATGTTCTTGGAATCCAAATCATAAGGGATCGTAAGAAAAAAATGCTAGCACTGTCTCAAGCAACCTATATTGACAAAATGTTGGTCCGATATTTGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAATATATGAGACGTATTCTCTATGCCTTAGCTGTGGGCAGCTTAATGTATGTCATGCTCTGTATTAAGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCTAACCTAGGGTTAGACCATTGGACGACAGTTAAAATTATTCTAAGTATCTTAGGAGAATGA

Coding sequence (CDS)

ATGTTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTGCCTTAAAGAGACGAGAGGTGGTCTATTCTTCGATCCACAAGAAAATAGAGTGTTTGTATCGATAAATGCTACTTTCTTGGAAGAAGACCACATGAGAGATCATAAACCACGAAGAAAATTAGTATTAAATGAAGCTACTGATGAATCAACAAGGGATGTTGATGAAGTTGGTCCCTCATCAAAAGTTGATGAAACCACCACATCGGGTCAATCTCATCCTTCTCAATCATTGAGAATGCCTCGACGCAGTGGGAGGATTGTATCACAACCTAACCGTTATTTGGGTTTAACTGAAACTCATGTTGTCATACTAGATAATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGATCTTGAAATTGAGTCTATGTACTTCAATTCAGTGTGGGAGACCTTCAAAGCTAGACTTGTAGCAAAAGTGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTTTCCCCTGTTGCTATGTTAAAGTCTATAAGGATTCTTTTGTCCATCGCCGCATTTTATAATTATGAAATATGGAAAATGGATGTCAAGACTGCTTTTCTGAATGACAATCTTGAAGAGATTATCTTTATATCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTCAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTACGGTTTTGACCAAAACGTTGATGAACCTTGTGTATATAAGAAAAACAATAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTAGACGATATCCTCCTCATTGAGAATGATGTGGGATACCTTACTGACGTTAAAGCTTGGCTAGTAGCCCAATTCCAAATAAAAGATTTAGGAGAGGCACAATATGTTCTTGGAATCCAAATCATAAGGGATCGTAAGAAAAAAATGCTAGCACTGTCTCAAGCAACCTATATTGACAAAATGTTGGTCCGATATTTGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAATATATGAGACGTATTCTCTATGCCTTAGCTGTGGGCAGCTTAATGTATGTCATGCTCTGTATTAAGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCTAACCTAGGGTTAGACCATTGGACGACAGTTAAAATTATTCTAAGTATCTTAGGAGAATGA

Protein sequence

MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRKLVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETHVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWETFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIWKMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGEAQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSILGE
Homology
BLAST of Cmc10g0281931 vs. NCBI nr
Match: TYK03188.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 826.6 bits (2134), Expect = 1.0e-235
Identity = 421/459 (91.72%), Postives = 423/459 (92.16%), Query Frame = 0

Query: 1   MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRK 60
           MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVS NATFLEEDHMRDHKPRRK
Sbjct: 1   MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSKNATFLEEDHMRDHKPRRK 60

Query: 61  LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTET 120
           LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPN YLGLTET
Sbjct: 61  LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNPYLGLTET 120

Query: 121 HVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------- 180
            VVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE               
Sbjct: 121 QVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWEVVDLSEGVKPIGCKW 180

Query: 181 -------------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIW 240
                        TFKARLVAKVYTQREGVDYEETF PV+MLKSIR+LLSI AFYNYEIW
Sbjct: 181 IYKRKRDSAGKVQTFKARLVAKVYTQREGVDYEETFFPVSMLKSIRVLLSIVAFYNYEIW 240

Query: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
           KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK
Sbjct: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300

Query: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
           SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE
Sbjct: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360

Query: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
           AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP
Sbjct: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420

Query: 421 QEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRY 432
           QEVE MRRI YALAVGSLMY MLCIKPDICYAVGIVSRY
Sbjct: 421 QEVEDMRRIPYALAVGSLMYAMLCIKPDICYAVGIVSRY 459

BLAST of Cmc10g0281931 vs. NCBI nr
Match: KAA0056325.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 823.9 bits (2127), Expect = 6.6e-235
Identity = 420/458 (91.70%), Postives = 422/458 (92.14%), Query Frame = 0

Query: 1   MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRK 60
           MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVS NATFLEEDHMRDHKPRRK
Sbjct: 1   MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSKNATFLEEDHMRDHKPRRK 60

Query: 61  LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTET 120
           LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPN YLGLTET
Sbjct: 61  LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNPYLGLTET 120

Query: 121 HVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------- 180
            VVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE               
Sbjct: 121 QVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWEVVDLSEGVKPIGCKW 180

Query: 181 -------------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIW 240
                        TFKARLVAKVYTQREGVDYEETF PV+MLKSIR+LLSI AFYNYEIW
Sbjct: 181 IYKRKRDSAGKVQTFKARLVAKVYTQREGVDYEETFFPVSMLKSIRVLLSIVAFYNYEIW 240

Query: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
           KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK
Sbjct: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300

Query: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
           SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE
Sbjct: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360

Query: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
           AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP
Sbjct: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420

Query: 421 QEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSR 431
           QEVE MRRI YALAVGSLMY MLCIKPDICYAVGIVSR
Sbjct: 421 QEVEDMRRIPYALAVGSLMYAMLCIKPDICYAVGIVSR 458

BLAST of Cmc10g0281931 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 797.7 bits (2059), Expect = 5.1e-227
Identity = 408/478 (85.36%), Postives = 422/478 (88.28%), Query Frame = 0

Query: 1    MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRK 60
            +LVTNPKKLEPRSRLCQFVG  KETRGGLFFDPQENRVFVS NATFLEEDHMR+HKPR K
Sbjct: 582  VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSK 641

Query: 61   LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTET 120
            LVL+EATDESTR VDEVGPSS+VDETTTSGQSHPSQSLRMPRRSGR+VSQPNRYLGLTET
Sbjct: 642  LVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTET 701

Query: 121  HVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------- 180
             VVI D+GVEDPLSYKQAMNDVDKDQWVKAMDLE+ESMYFNSVWE               
Sbjct: 702  QVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKW 761

Query: 181  -------------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIW 240
                         TFKARLVAK YTQREGVDYEETFSPVAMLKSIRILLSIA FY+YEIW
Sbjct: 762  IYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIW 821

Query: 241  KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
            +MDVKTAFLN NLEE IF+SQPEGFITQGQEQKVCKLNRSIYG KQASRSWNIRFDTAIK
Sbjct: 822  QMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIK 881

Query: 301  SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
            SYGFDQNVDEPCVYKK NKGKVAFLVLYVDDILLI NDVGYLTDVKAWL AQFQ+KDLGE
Sbjct: 882  SYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE 941

Query: 361  AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
            AQYVLGIQIIRDRK K LALSQATYIDK+LVRY MQNSKKGLLPFRHGVHLSKEQ PKTP
Sbjct: 942  AQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTP 1001

Query: 421  QEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSIL 451
            QEVE MRRI YA AVGSLMY MLC +PDICYAVGIVSRYQSN GLDHWT VKI+L  L
Sbjct: 1002 QEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYL 1059

BLAST of Cmc10g0281931 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 797.7 bits (2059), Expect = 5.1e-227
Identity = 408/478 (85.36%), Postives = 422/478 (88.28%), Query Frame = 0

Query: 1   MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRK 60
           +LVTNPKKLEPRSRLCQFVG  KETRGGLFFDPQENRVFVS NATFLEEDHMR+HKPR K
Sbjct: 456 VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSK 515

Query: 61  LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTET 120
           LVL+EATDESTR VDEVGPSS+VDETTTSGQSHPSQSLRMPRRSGR+VSQPNRYLGLTET
Sbjct: 516 LVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTET 575

Query: 121 HVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------- 180
            VVI D+GVEDPLSYKQAMNDVDKDQWVKAMDLE+ESMYFNSVWE               
Sbjct: 576 QVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKW 635

Query: 181 -------------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIW 240
                        TFKARLVAK YTQREGVDYEETFSPVAMLKSIRILLSIA FY+YEIW
Sbjct: 636 IYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIW 695

Query: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
           +MDVKTAFLN NLEE IF+SQPEGFITQGQEQKVCKLNRSIYG KQASRSWNIRFDTAIK
Sbjct: 696 QMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIK 755

Query: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
           SYGFDQNVDEPCVYKK NKGKVAFLVLYVDDILLI NDVGYLTDVKAWL AQFQ+KDLGE
Sbjct: 756 SYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE 815

Query: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
           AQYVLGIQIIRDRK K LALSQATYIDK+LVRY MQNSKKGLLPFRHGVHLSKEQ PKTP
Sbjct: 816 AQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTP 875

Query: 421 QEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSIL 451
           QEVE MRRI YA AVGSLMY MLC +PDICYAVGIVSRYQSN GLDHWT VKI+L  L
Sbjct: 876 QEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYL 933

BLAST of Cmc10g0281931 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 788.9 bits (2036), Expect = 2.4e-224
Identity = 404/478 (84.52%), Postives = 420/478 (87.87%), Query Frame = 0

Query: 1    MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRK 60
            +LVTNPKKLEPRSRLCQFVG  KETRGGLFFDP+ENRVFVS NATFLEEDHMR+HKPR K
Sbjct: 582  VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRSK 641

Query: 61   LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTET 120
            LVL+EATDESTR VDEVGPSS+VDETTTSGQSHPSQSLRMPRRSGR+VSQPNRYLGLTET
Sbjct: 642  LVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTET 701

Query: 121  HVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------- 180
             VVI D+GVEDPLSYKQAMNDVDKDQWVKAMDLE+ESMYFNSVWE               
Sbjct: 702  QVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKW 761

Query: 181  -------------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIW 240
                         TFKARLVAK YT++EGVDYEETFS VAMLKSIRILLSIA FY+YEIW
Sbjct: 762  IYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFSSVAMLKSIRILLSIAKFYDYEIW 821

Query: 241  KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
            +MDVKTAFLN NLEE IF+SQPEGFITQGQEQKVCKLNRSIYG KQASRSWNIRFDTAIK
Sbjct: 822  QMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIK 881

Query: 301  SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
            SYGFDQNVDEPCVYKK NKGKVAFLVLYVDDILLI NDVGYLTDVKAWL AQFQ+KDLGE
Sbjct: 882  SYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE 941

Query: 361  AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
             QYVLGIQIIRDRK K LALSQATYIDK+LVRY MQNSKKGLLPFRHGVHLSKEQ PKTP
Sbjct: 942  GQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTP 1001

Query: 421  QEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSIL 451
            QEVE MRRI YA AVGSLMY MLC +PDICYAVGIVSRYQSN GLDHWT VKIIL  L
Sbjct: 1002 QEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYL 1059

BLAST of Cmc10g0281931 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.3e-76
Identity = 179/498 (35.94%), Postives = 274/498 (55.02%), Query Frame = 0

Query: 8    KLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHM----RDHKPRRKLVL 67
            KL+ +S  C F+G   E  G   +DP + +V  S +  F E +         K +  ++ 
Sbjct: 666  KLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIP 725

Query: 68   NEATDESTRDVDEVGPSSKVDETTTSGQ-------------------SHPSQSLRMP--- 127
            N  T  ST + +     S  DE +  G+                    HP+Q        
Sbjct: 726  NFVTIPSTSN-NPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPL 785

Query: 128  RRSGRIVSQPNRYLGLTETHVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFN 187
            RRS R   +  RY   +  +V+I D+   +P S K+ ++  +K+Q +KAM  E+ES+  N
Sbjct: 786  RRSERPRVESRRY--PSTEYVLISDD--REPESLKEVLSHPEKNQLMKAMQEEMESLQKN 845

Query: 188  SVWE----------------------------TFKARLVAKVYTQREGVDYEETFSPVAM 247
              ++                             +KARLV K + Q++G+D++E FSPV  
Sbjct: 846  GTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVK 905

Query: 248  LKSIRILLSIAAFYNYEIWKMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSI 307
            + SIR +LS+AA  + E+ ++DVKTAFL+ +LEE I++ QPEGF   G++  VCKLN+S+
Sbjct: 906  MTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSL 965

Query: 308  YGFKQASRSWNIRFDTAIKSYGFDQNVDEPCVY-KKNNKGKVAFLVLYVDDILLIENDVG 367
            YG KQA R W ++FD+ +KS  + +   +PCVY K+ ++     L+LYVDD+L++  D G
Sbjct: 966  YGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKG 1025

Query: 368  YLTDVKAWLVAQFQIKDLGEAQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKK 427
             +  +K  L   F +KDLG AQ +LG++I+R+R  + L LSQ  YI+++L R+ M+N+K 
Sbjct: 1026 LIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKP 1085

Query: 428  GLLPFRHGVHLSKEQCPKTPQEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQ 451
               P    + LSK+ CP T +E   M ++ Y+ AVGSLMY M+C +PDI +AVG+VSR+ 
Sbjct: 1086 VSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFL 1145

BLAST of Cmc10g0281931 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 193.4 bits (490), Expect = 5.7e-48
Identity = 137/477 (28.72%), Postives = 240/477 (50.31%), Query Frame = 0

Query: 13   SRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRKLVLNEATDESTR 72
            S+ C  +  LK+++       + N+ F++ +     +DH+ + K       NE+ +  T 
Sbjct: 784  SKECDNIQFLKDSK-------ESNKYFLNESKKRKRDDHLNESKGSGN--PNESRESETA 843

Query: 73   D-VDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETHV--VILDNGV 132
            + + E+G    +D  T +          + RRS R+ ++P       +  +  V+L+   
Sbjct: 844  EHLKEIG----IDNPTKNDGIE-----IINRRSERLKTKPQISYNEEDNSLNKVVLNAHT 903

Query: 133  ---EDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------------- 192
               + P S+ +     DK  W +A++ E+ +   N+ W                      
Sbjct: 904  IFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKY 963

Query: 193  -------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIWKMDVKT 252
                    +KARLVA+ +TQ+  +DYEETF+PVA + S R +LS+   YN ++ +MDVKT
Sbjct: 964  NELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKT 1023

Query: 253  AFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIKSYGFDQ 312
            AFLN  L+E I++  P+G         VCKLN++IYG KQA+R W   F+ A+K   F  
Sbjct: 1024 AFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVN 1083

Query: 313  NVDEPCVY--KKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGEAQYV 372
            +  + C+Y   K N  +  +++LYVDD+++   D+  + + K +L+ +F++ DL E ++ 
Sbjct: 1084 SSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHF 1143

Query: 373  LGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVH---LSKEQCPKTPQ 432
            +GI+I  + ++  + LSQ+ Y+ K+L ++ M+N      P    ++   L+ ++   TP 
Sbjct: 1144 IGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTP- 1203

Query: 433  EVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSIL 451
                         +G LMY+MLC +PD+  AV I+SRY S    + W  +K +L  L
Sbjct: 1204 ---------CRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYL 1228

BLAST of Cmc10g0281931 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.8e-42
Identity = 114/349 (32.66%), Postives = 169/349 (48.42%), Query Frame = 0

Query: 131  DPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE------------------------- 190
            +P +  QAM D   D+W +AM  EI +   N  W+                         
Sbjct: 938  EPRTAIQAMKD---DRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSD 997

Query: 191  ----TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIWKMDVKTAFL 250
                 +KARLVAK Y QR G+DY ETFSPV    SIRI+L +A   ++ I ++DV  AFL
Sbjct: 998  GSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1057

Query: 251  NDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIKSYGFDQNVD 310
               L + +++SQP GF+ + +   VC+L ++IYG KQA R+W +   T + + GF  ++ 
Sbjct: 1058 QGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSIS 1117

Query: 311  EPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGEAQYVLGIQI 370
            +  ++       + ++++YVDDIL+  ND   L      L  +F +K+  +  Y LGI+ 
Sbjct: 1118 DTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIE- 1177

Query: 371  IRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEYMRRI 430
               R  + L LSQ  Y   +L R  M  +K    P      L+     K P   EY    
Sbjct: 1178 -AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRG-- 1237

Query: 431  LYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSIL 451
                 VGSL Y+    +PD+ YAV  +S+Y      DHW  +K +L  L
Sbjct: 1238 ----IVGSLQYLAF-TRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYL 1274

BLAST of Cmc10g0281931 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.9e-39
Identity = 115/349 (32.95%), Postives = 166/349 (47.56%), Query Frame = 0

Query: 131  DPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE------------------------- 190
            +P +  QA+ D   ++W  AM  EI +   N  W+                         
Sbjct: 955  EPRTAIQALKD---ERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSD 1014

Query: 191  ----TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIWKMDVKTAFL 250
                 +KARLVAK Y QR G+DY ETFSPV    SIRI+L +A   ++ I ++DV  AFL
Sbjct: 1015 GSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1074

Query: 251  NDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIKSYGFDQNVD 310
               L + +++SQP GFI + +   VCKL +++YG KQA R+W +     + + GF  +V 
Sbjct: 1075 QGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVS 1134

Query: 311  EPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGEAQYVLGIQI 370
            +  ++       + ++++YVDDIL+  ND   L +    L  +F +KD  E  Y LGI+ 
Sbjct: 1135 DTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIE- 1194

Query: 371  IRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEYMRRI 430
               R    L LSQ  YI  +L R  M  +K    P      LS     K     EY    
Sbjct: 1195 -AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRG-- 1254

Query: 431  LYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSIL 451
                 VGSL Y+    +PDI YAV  +S++      +H   +K IL  L
Sbjct: 1255 ----IVGSLQYLAF-TRPDISYAVNRLSQFMHMPTEEHLQALKRILRYL 1291

BLAST of Cmc10g0281931 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 1.6e-18
Identity = 66/237 (27.85%), Postives = 103/237 (43.46%), Query Frame = 0

Query: 214 MDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIKS 273
           MDV TAFLN  ++E I++ QP GF+ +     V +L   +YG KQA   WN   +  +K 
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 274 YGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGEA 333
            GF ++  E  +Y ++      ++ +YVDD+L+          VK  L   + +KDLG+ 
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 334 QYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTPQ 393
              LG+  I       + LS   YI K      +   K    P  +   L +   P    
Sbjct: 121 DKFLGLN-IHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKD 180

Query: 394 EVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSIL 451
              Y         VG L++     +PDI Y V ++SR+       H  + + +L  L
Sbjct: 181 ITPYQS------IVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYL 230

BLAST of Cmc10g0281931 vs. ExPASy TrEMBL
Match: A0A5D3BW42 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00940 PE=4 SV=1)

HSP 1 Score: 826.6 bits (2134), Expect = 4.9e-236
Identity = 421/459 (91.72%), Postives = 423/459 (92.16%), Query Frame = 0

Query: 1   MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRK 60
           MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVS NATFLEEDHMRDHKPRRK
Sbjct: 1   MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSKNATFLEEDHMRDHKPRRK 60

Query: 61  LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTET 120
           LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPN YLGLTET
Sbjct: 61  LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNPYLGLTET 120

Query: 121 HVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------- 180
            VVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE               
Sbjct: 121 QVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWEVVDLSEGVKPIGCKW 180

Query: 181 -------------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIW 240
                        TFKARLVAKVYTQREGVDYEETF PV+MLKSIR+LLSI AFYNYEIW
Sbjct: 181 IYKRKRDSAGKVQTFKARLVAKVYTQREGVDYEETFFPVSMLKSIRVLLSIVAFYNYEIW 240

Query: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
           KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK
Sbjct: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300

Query: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
           SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE
Sbjct: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360

Query: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
           AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP
Sbjct: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420

Query: 421 QEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRY 432
           QEVE MRRI YALAVGSLMY MLCIKPDICYAVGIVSRY
Sbjct: 421 QEVEDMRRIPYALAVGSLMYAMLCIKPDICYAVGIVSRY 459

BLAST of Cmc10g0281931 vs. ExPASy TrEMBL
Match: A0A5A7URX4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G00160 PE=4 SV=1)

HSP 1 Score: 823.9 bits (2127), Expect = 3.2e-235
Identity = 420/458 (91.70%), Postives = 422/458 (92.14%), Query Frame = 0

Query: 1   MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRK 60
           MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVS NATFLEEDHMRDHKPRRK
Sbjct: 1   MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSKNATFLEEDHMRDHKPRRK 60

Query: 61  LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTET 120
           LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPN YLGLTET
Sbjct: 61  LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNPYLGLTET 120

Query: 121 HVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------- 180
            VVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE               
Sbjct: 121 QVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWEVVDLSEGVKPIGCKW 180

Query: 181 -------------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIW 240
                        TFKARLVAKVYTQREGVDYEETF PV+MLKSIR+LLSI AFYNYEIW
Sbjct: 181 IYKRKRDSAGKVQTFKARLVAKVYTQREGVDYEETFFPVSMLKSIRVLLSIVAFYNYEIW 240

Query: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
           KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK
Sbjct: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300

Query: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
           SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE
Sbjct: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360

Query: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
           AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP
Sbjct: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420

Query: 421 QEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSR 431
           QEVE MRRI YALAVGSLMY MLCIKPDICYAVGIVSR
Sbjct: 421 QEVEDMRRIPYALAVGSLMYAMLCIKPDICYAVGIVSR 458

BLAST of Cmc10g0281931 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 797.7 bits (2059), Expect = 2.5e-227
Identity = 408/478 (85.36%), Postives = 422/478 (88.28%), Query Frame = 0

Query: 1    MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRK 60
            +LVTNPKKLEPRSRLCQFVG  KETRGGLFFDPQENRVFVS NATFLEEDHMR+HKPR K
Sbjct: 582  VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSK 641

Query: 61   LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTET 120
            LVL+EATDESTR VDEVGPSS+VDETTTSGQSHPSQSLRMPRRSGR+VSQPNRYLGLTET
Sbjct: 642  LVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTET 701

Query: 121  HVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------- 180
             VVI D+GVEDPLSYKQAMNDVDKDQWVKAMDLE+ESMYFNSVWE               
Sbjct: 702  QVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKW 761

Query: 181  -------------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIW 240
                         TFKARLVAK YTQREGVDYEETFSPVAMLKSIRILLSIA FY+YEIW
Sbjct: 762  IYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIW 821

Query: 241  KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
            +MDVKTAFLN NLEE IF+SQPEGFITQGQEQKVCKLNRSIYG KQASRSWNIRFDTAIK
Sbjct: 822  QMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIK 881

Query: 301  SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
            SYGFDQNVDEPCVYKK NKGKVAFLVLYVDDILLI NDVGYLTDVKAWL AQFQ+KDLGE
Sbjct: 882  SYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE 941

Query: 361  AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
            AQYVLGIQIIRDRK K LALSQATYIDK+LVRY MQNSKKGLLPFRHGVHLSKEQ PKTP
Sbjct: 942  AQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTP 1001

Query: 421  QEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSIL 451
            QEVE MRRI YA AVGSLMY MLC +PDICYAVGIVSRYQSN GLDHWT VKI+L  L
Sbjct: 1002 QEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYL 1059

BLAST of Cmc10g0281931 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 797.7 bits (2059), Expect = 2.5e-227
Identity = 408/478 (85.36%), Postives = 422/478 (88.28%), Query Frame = 0

Query: 1   MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRK 60
           +LVTNPKKLEPRSRLCQFVG  KETRGGLFFDPQENRVFVS NATFLEEDHMR+HKPR K
Sbjct: 456 VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSK 515

Query: 61  LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTET 120
           LVL+EATDESTR VDEVGPSS+VDETTTSGQSHPSQSLRMPRRSGR+VSQPNRYLGLTET
Sbjct: 516 LVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTET 575

Query: 121 HVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------- 180
            VVI D+GVEDPLSYKQAMNDVDKDQWVKAMDLE+ESMYFNSVWE               
Sbjct: 576 QVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKW 635

Query: 181 -------------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIW 240
                        TFKARLVAK YTQREGVDYEETFSPVAMLKSIRILLSIA FY+YEIW
Sbjct: 636 IYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIW 695

Query: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
           +MDVKTAFLN NLEE IF+SQPEGFITQGQEQKVCKLNRSIYG KQASRSWNIRFDTAIK
Sbjct: 696 QMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIK 755

Query: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
           SYGFDQNVDEPCVYKK NKGKVAFLVLYVDDILLI NDVGYLTDVKAWL AQFQ+KDLGE
Sbjct: 756 SYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE 815

Query: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
           AQYVLGIQIIRDRK K LALSQATYIDK+LVRY MQNSKKGLLPFRHGVHLSKEQ PKTP
Sbjct: 816 AQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTP 875

Query: 421 QEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSIL 451
           QEVE MRRI YA AVGSLMY MLC +PDICYAVGIVSRYQSN GLDHWT VKI+L  L
Sbjct: 876 QEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYL 933

BLAST of Cmc10g0281931 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 788.9 bits (2036), Expect = 1.1e-224
Identity = 404/478 (84.52%), Postives = 420/478 (87.87%), Query Frame = 0

Query: 1    MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRK 60
            +LVTNPKKLEPRSRLCQFVG  KETRGGLFFDP+ENRVFVS NATFLEEDHMR+HKPR K
Sbjct: 582  VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRSK 641

Query: 61   LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTET 120
            LVL+EATDESTR VDEVGPSS+VDETTTSGQSHPSQSLRMPRRSGR+VSQPNRYLGLTET
Sbjct: 642  LVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTET 701

Query: 121  HVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------- 180
             VVI D+GVEDPLSYKQAMNDVDKDQWVKAMDLE+ESMYFNSVWE               
Sbjct: 702  QVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKW 761

Query: 181  -------------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIW 240
                         TFKARLVAK YT++EGVDYEETFS VAMLKSIRILLSIA FY+YEIW
Sbjct: 762  IYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFSSVAMLKSIRILLSIAKFYDYEIW 821

Query: 241  KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
            +MDVKTAFLN NLEE IF+SQPEGFITQGQEQKVCKLNRSIYG KQASRSWNIRFDTAIK
Sbjct: 822  QMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIK 881

Query: 301  SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
            SYGFDQNVDEPCVYKK NKGKVAFLVLYVDDILLI NDVGYLTDVKAWL AQFQ+KDLGE
Sbjct: 882  SYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE 941

Query: 361  AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
             QYVLGIQIIRDRK K LALSQATYIDK+LVRY MQNSKKGLLPFRHGVHLSKEQ PKTP
Sbjct: 942  GQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTP 1001

Query: 421  QEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSIL 451
            QEVE MRRI YA AVGSLMY MLC +PDICYAVGIVSRYQSN GLDHWT VKIIL  L
Sbjct: 1002 QEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYL 1059

BLAST of Cmc10g0281931 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 157.5 bits (397), Expect = 2.5e-38
Identity = 107/350 (30.57%), Postives = 174/350 (49.71%), Query Frame = 0

Query: 130 EDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVW------------------------- 189
           ++P +Y +A   +    W  AMD EI +M     W                         
Sbjct: 84  KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 190 ---ETFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIWKMDVKTAFL 249
              E +KARLVAK YTQ+EG+D+ ETFSPV  L S++++L+I+A YN+ + ++D+  AFL
Sbjct: 144 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 250 NDNLEEIIFISQPEGFIT-QGQE---QKVCKLNRSIYGFKQASRSWNIRFDTAIKSYGFD 309
           N +L+E I++  P G+   QG       VC L +SIYG KQASR W ++F   +  +GF 
Sbjct: 204 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

Query: 310 QNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGEAQYVL 369
           Q+  +   + K        +++YVDDI++  N+   + ++K+ L + F+++DLG  +Y L
Sbjct: 264 QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323

Query: 370 GIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEY 429
           G++I R      + + Q  Y   +L    +   K   +P    V  S           ++
Sbjct: 324 GLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH------SGGDF 383

Query: 430 MRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIIL 448
           +    Y   +G LMY+ +  + DI +AV  +S++     L H   V  IL
Sbjct: 384 VDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKIL 421

BLAST of Cmc10g0281931 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 6.6e-07
Identity = 50/152 (32.89%), Postives = 71/152 (46.71%), Query Frame = 0

Query: 296 FLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGEAQYVLGIQIIRDRKKKMLALSQA 355
           +L+LYVDDILL  +    L  +   L + F +KDLG   Y LGIQI        L LSQ 
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQT 61

Query: 356 TYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEYMRRILYALAVGSLMYVML 415
            Y +++L    M + K    P    ++ S     K P   ++         VG+L Y+ L
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRS------IVGALQYLTL 121

Query: 416 CIKPDICYAVGIVSRYQSNLGLDHWTTVKIIL 448
             +PDI YAV IV +      L  +  +K +L
Sbjct: 122 -TRPDISYAVNIVCQRMHEPTLADFDLLKRVL 143

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK03188.11.0e-23591.72gag/pol protein [Cucumis melo var. makuwa][more]
KAA0056325.16.6e-23591.70gag/pol protein [Cucumis melo var. makuwa][more]
KAA0025945.15.1e-22785.36gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi... [more]
KAA0059226.15.1e-22785.36gag/pol protein [Cucumis melo var. makuwa][more]
KAA0035907.12.4e-22484.52gag/pol protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
P109781.3e-7635.94Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041465.7e-4828.72Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT942.8e-4232.66Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW22.9e-3932.95Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
P256001.6e-1827.85Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
Match NameE-valueIdentityDescription
A0A5D3BW424.9e-23691.72Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00940... [more]
A0A5A7URX43.2e-23591.70Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G0016... [more]
A0A5A7TZD02.5e-22785.36Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000... [more]
A0A5A7UYE82.5e-22785.36Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015... [more]
A0A5A7T2V91.1e-22484.52Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760... [more]
Match NameE-valueIdentityDescription
AT4G23160.12.5e-3830.57cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.16.6e-0732.89DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 166..375
e-value: 9.1E-57
score: 192.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..103
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 125..445
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 206..346

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0281931.1Cmc10g0281931.1mRNA