Cmc10g0279681 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0279681
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	LOB domain-containing protein
Location	CMiso1.1chr10: 17108858 .. 17109660 (-)
RNA-Seq Expression	Cmc10g0279681
Synteny	Cmc10g0279681

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTCAAAGTTTCAGTTCTAAAGAAAACTCTCTCTCTCCGCCGTCTCTTTCTCTCTCTAATTTTTCTTTTCCGTGGAAGGAAAAAAGAAATATGGGTGGGAATTCGCCGTGTGCCTCCTGCAAACTCCTCCGACGACGGTGCGCCAAAGACTGCATTTTTGCTCCCTATTTTCCCTCTGATGACCCCCACAAGTTTGCTATTGTCCATAAAGTTTTTGGTGCCAGCAATGTGAGCAAAATGTTACAGGTTCTTCTTCCTTTCCTTACTTCCTTCTCTGTTGTTTGGGGTTAGGTTTAAACGTATTTTCAAAAACAGAAAACAAATTATAAAACTTTTATGTTTTTGATCTATAATAATAAAAGAAAAAATGATTGATATAAACAGGAGCTGCCAGTTCAGCAAAGAGGCGACGCGGTGATGAGTTTAGTCTATGAAGCAAGTGCAAGAGTGAGGGACCCGGTTTATGGTTGTGTAGGGGCAATTTCGTACTTACAAAATCAAGTTTCACAATTACAAATGCAATTGGCTGTTGCTCAAGCTGAGATTCTTTGTATCCAAATGCAACAAGACCACCCCGTTTTCCCAAATTGCCCTCAGATCCACTCCGACGATAAATCTTCCTCTCTTCTCCTCCCCCCGCCCTCTCCTCCCCCCTCTCAGTGCCTCAATTTTGCTGCTTCCTCTCCCAATGTAATTTATGACACCATTTTTGGACATGACATAGTTTCTTAATTTATTCATATCATCATCTTATCCTCATAATTTTTATCATAACTTCTTTTTCATCTCATTTAATTATT

mRNA sequence

CTCTCTCAAAGTTTCAGTTCTAAAGAAAACTCTCTCTCTCCGCCGTCTCTTTCTCTCTCTAATTTTTCTTTTCCGTGGAAGGAAAAAAGAAATATGGGTGGGAATTCGCCGTGTGCCTCCTGCAAACTCCTCCGACGACGGTGCGCCAAAGACTGCATTTTTGCTCCCTATTTTCCCTCTGATGACCCCCACAAGTTTGCTATTGTCCATAAAGTTTTTGGTGCCAGCAATGTGAGCAAAATGTTACAGGAGCTGCCAGTTCAGCAAAGAGGCGACGCGGTGATGAGTTTAGTCTATGAAGCAAGTGCAAGAGTGAGGGACCCGGTTTATGGTTGTGTAGGGGCAATTTCGTACTTACAAAATCAAGTTTCACAATTACAAATGCAATTGGCTGTTGCTCAAGCTGAGATTCTTTGTATCCAAATGCAACAAGACCACCCCGTTTTCCCAAATTGCCCTCAGATCCACTCCGACGATAAATCTTCCTCTCTTCTCCTCCCCCCGCCCTCTCCTCCCCCCTCTCAGTGCCTCAATTTTGCTGCTTCCTCTCCCAATGTAATTTATGACACCATTTTTGGACATGACATAGTTTCTTAATTTATTCATATCATCATCTTATCCTCATAATTTTTATCATAACTTCTTTTTCATCTCATTTAATTATT

Coding sequence (CDS)

ATGGGTGGGAATTCGCCGTGTGCCTCCTGCAAACTCCTCCGACGACGGTGCGCCAAAGACTGCATTTTTGCTCCCTATTTTCCCTCTGATGACCCCCACAAGTTTGCTATTGTCCATAAAGTTTTTGGTGCCAGCAATGTGAGCAAAATGTTACAGGAGCTGCCAGTTCAGCAAAGAGGCGACGCGGTGATGAGTTTAGTCTATGAAGCAAGTGCAAGAGTGAGGGACCCGGTTTATGGTTGTGTAGGGGCAATTTCGTACTTACAAAATCAAGTTTCACAATTACAAATGCAATTGGCTGTTGCTCAAGCTGAGATTCTTTGTATCCAAATGCAACAAGACCACCCCGTTTTCCCAAATTGCCCTCAGATCCACTCCGACGATAAATCTTCCTCTCTTCTCCTCCCCCCGCCCTCTCCTCCCCCCTCTCAGTGCCTCAATTTTGCTGCTTCCTCTCCCAATGTAATTTATGACACCATTTTTGGACATGACATAGTTTCTTAA

Protein sequence

MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPNCPQIHSDDKSSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS

Homology

[Close]

BLAST of Cmc10g0279681 vs. NCBI nr
Match: KAA0035899.1 (LOB domain-containing protein 12-like [Cucumis melo var. makuwa] >TYK19054.1 LOB domain-containing protein 12-like [Cucumis melo var. makuwa])

HSP 1 Score: 342.4 bits (877), Expect = 2.2e-90
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDKSSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS 168
           CPQIHSDDKSSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS
Sbjct: 121 CPQIHSDDKSSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS 167

[Close]

BLAST of Cmc10g0279681 vs. NCBI nr
Match: XP_004148190.1 (LOB domain-containing protein 12 [Cucumis sativus] >KGN50694.1 hypothetical protein Csa_005796 [Cucumis sativus])

HSP 1 Score: 340.5 bits (872), Expect = 8.2e-90
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDKSSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS 168
           CPQIHSDDK SSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS
Sbjct: 121 CPQIHSDDKPSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS 167

[Close]

BLAST of Cmc10g0279681 vs. NCBI nr
Match: XP_038893139.1 (LOB domain-containing protein 12-like [Benincasa hispida])

HSP 1 Score: 331.3 bits (848), Expect = 5.0e-87
Identity = 163/167 (97.60%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCA+DCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCARDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDKSSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS 168
           CPQIHSDDK  SLLLPPPSPPPSQCLNF ASSPNVIYDTIFGHDIVS
Sbjct: 121 CPQIHSDDKPPSLLLPPPSPPPSQCLNF-ASSPNVIYDTIFGHDIVS 166

[Close]

BLAST of Cmc10g0279681 vs. NCBI nr
Match: XP_023536420.1 (LOB domain-containing protein 12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 326.2 bits (835), Expect = 1.6e-85
Identity = 161/167 (96.41%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDKSSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS 168
           CPQIHSDDK  +LLLPPPS PPSQCLNF ASSPNVIYD IFGHDIVS
Sbjct: 121 CPQIHSDDKPPTLLLPPPSSPPSQCLNF-ASSPNVIYDAIFGHDIVS 166

[Close]

BLAST of Cmc10g0279681 vs. NCBI nr
Match: XP_022957028.1 (LOB domain-containing protein 12-like [Cucurbita moschata] >KAG6600910.1 LOB domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031545.1 LOB domain-containing protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 324.7 bits (831), Expect = 4.6e-85
Identity = 160/167 (95.81%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDKSSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS 168
           CPQIHSD+K  +LLLPPPS PPSQCLNF ASSPNVIYD IFGHDIVS
Sbjct: 121 CPQIHSDEKPPTLLLPPPSSPPSQCLNF-ASSPNVIYDAIFGHDIVS 166

[Close]

BLAST of Cmc10g0279681 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 213.0 bits (541), Expect = 2.6e-54
Identity = 107/133 (80.45%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 3   GNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDA 62
           G+SPCASCKLLRRRCAKDCIFAPYFP DDPHKFAIVHKVFGASNVSKMLQELPV QR DA
Sbjct: 5   GSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADA 64

Query: 63  VMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPNCP 122
           V SLV+EA+ARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ +  +  +  
Sbjct: 65  VNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSHHQ 124

Query: 123 QIHSDDKSSSLLL 136
            +  D    +LLL
Sbjct: 125 VLELDQDHKALLL 137

[Close]

BLAST of Cmc10g0279681 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.6e-43
Identity = 87/133 (65.41%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 2   GGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGD 61
           G  SPCA+CKLLRRRCA+DC+F+PYFP+D+P KFA VH+VFGASNV+KMLQELP+ QRGD
Sbjct: 9   GAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGD 68

Query: 62  AVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQ--DHPVFP 121
           AV S+VYEA+ARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQAE++ ++++Q  + P   
Sbjct: 69  AVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHG 128

Query: 122 NCPQIHSDDKSSS 133
            CP   S   S S
Sbjct: 129 LCPDSPSSSGSPS 141

[Close]

BLAST of Cmc10g0279681 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-36
Identity = 73/111 (65.77%), Postives = 88/111 (79.28%), Query Frame = 0


Query: 5   SPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAVM 64
           SPCA+CK+LRRRCA+ C+ APYFP  DP KF I H+VFGASN+ K LQELP  QR DAV 
Sbjct: 32  SPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVN 91

Query: 65  SLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDH 116
           S+VYEA AR+RDPVYGC GAI +LQ QVS+LQ QLA AQ E++ +Q Q+ +
Sbjct: 92  SMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQRSN 142

[Close]

BLAST of Cmc10g0279681 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 152.5 bits (384), Expect = 4.1e-36
Identity = 72/109 (66.06%), Postives = 86/109 (78.90%), Query Frame = 0


Query: 5   SPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAVM 64
           SPCA+CK+LRRRCA  C+ APYFP  DP KF I H+VFGASN+ K LQELP  QR DAV 
Sbjct: 54  SPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVN 113

Query: 65  SLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQ 114
           S+VYEA AR+RDPVYGC GAI +LQ QVS+LQ QLA  Q E++ +Q+Q+
Sbjct: 114 SMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQR 162

[Close]

BLAST of Cmc10g0279681 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.1e-36
Identity = 72/103 (69.90%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 4   NSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAV 63
           NSPCA+CK LRR+C   CIFAPYFP ++PHKFA VHK+FGASNV+K+L EL   QR DAV
Sbjct: 9   NSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAV 68

Query: 64  MSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 107
            SL YEA ARVRDPVYGCVGAISYLQ QV +LQ +L  A A++
Sbjct: 69  NSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADL 111

[Close]

BLAST of Cmc10g0279681 vs. ExPASy TrEMBL
Match: A0A5A7T3C6 (LOB domain-containing protein 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold529G00110 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.0e-90
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDKSSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS 168
           CPQIHSDDKSSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS
Sbjct: 121 CPQIHSDDKSSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS 167

[Close]

BLAST of Cmc10g0279681 vs. ExPASy TrEMBL
Match: A0A0A0KP74 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G215140 PE=3 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.0e-90
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDKSSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS 168
           CPQIHSDDK SSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS
Sbjct: 121 CPQIHSDDKPSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS 167

[Close]

BLAST of Cmc10g0279681 vs. ExPASy TrEMBL
Match: A0A6J1GZ19 (LOB domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111458522 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.2e-85
Identity = 160/167 (95.81%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120

Query: 121 CPQIHSDDKSSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS 168
           CPQIHSD+K  +LLLPPPS PPSQCLNF ASSPNVIYD IFGHDIVS
Sbjct: 121 CPQIHSDEKPPTLLLPPPSSPPSQCLNF-ASSPNVIYDAIFGHDIVS 166

[Close]

BLAST of Cmc10g0279681 vs. ExPASy TrEMBL
Match: A0A6J1IJ16 (LOB domain-containing protein 12-like OS=Cucurbita maxima OX=3661 GN=LOC111477301 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.1e-84
Identity = 158/167 (94.61%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60
           MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120
           DAVMSLVYEASARVRDPVYGCVGAISYLQ+QVSQLQMQLAVAQAEILCIQMQQDHP+FPN
Sbjct: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQSQVSQLQMQLAVAQAEILCIQMQQDHPIFPN 120

Query: 121 CPQIHSDDKSSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS 168
           CPQIHSD+K  +LLLPPPS PPSQCLNF ASSPNVIYD IFGHDIVS
Sbjct: 121 CPQIHSDEKPPTLLLPPPSSPPSQCLNF-ASSPNVIYDAIFGHDIVS 166

[Close]

BLAST of Cmc10g0279681 vs. ExPASy TrEMBL
Match: A0A6J1K2J3 (LOB domain-containing protein 12-like OS=Cucurbita maxima OX=3661 GN=LOC111491818 PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 4.4e-81
Identity = 153/167 (91.62%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 1   MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60
           MGG+SPCASCKLLRRRCAK+CIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG
Sbjct: 1   MGGSSPCASCKLLRRRCAKECIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 61  DAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPN 120
           DAVMSLVYEA+ARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQ+EILC QMQQDH VFPN
Sbjct: 61  DAVMSLVYEATARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQSEILCFQMQQDHLVFPN 120

Query: 121 CPQIHSDDKSSSLLLPPPSPPPSQCLNFAASSPNVIYDTIFGHDIVS 168
           CPQI+SD+K  SLLLPPPSPP SQC NFA+SS NVIYDTIFGHDIVS
Sbjct: 121 CPQIYSDEKPPSLLLPPPSPPRSQCFNFASSS-NVIYDTIFGHDIVS 166

[Close]

BLAST of Cmc10g0279681 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 213.0 bits (541), Expect = 1.8e-55
Identity = 107/133 (80.45%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 3   GNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDA 62
           G+SPCASCKLLRRRCAKDCIFAPYFP DDPHKFAIVHKVFGASNVSKMLQELPV QR DA
Sbjct: 5   GSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADA 64

Query: 63  VMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDHPVFPNCP 122
           V SLV+EA+ARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ +  +  +  
Sbjct: 65  VNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSHHQ 124

Query: 123 QIHSDDKSSSLLL 136
            +  D    +LLL
Sbjct: 125 VLELDQDHKALLL 137

[Close]

BLAST of Cmc10g0279681 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 177.2 bits (448), Expect = 1.1e-44
Identity = 87/133 (65.41%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 2   GGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGD 61
           G  SPCA+CKLLRRRCA+DC+F+PYFP+D+P KFA VH+VFGASNV+KMLQELP+ QRGD
Sbjct: 9   GAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGD 68

Query: 62  AVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQ--DHPVFP 121
           AV S+VYEA+ARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQAE++ ++++Q  + P   
Sbjct: 69  AVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHG 128

Query: 122 NCPQIHSDDKSSS 133
            CP   S   S S
Sbjct: 129 LCPDSPSSSGSPS 141

[Close]

BLAST of Cmc10g0279681 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 154.5 bits (389), Expect = 7.7e-38
Identity = 73/111 (65.77%), Postives = 88/111 (79.28%), Query Frame = 0


Query: 5   SPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAVM 64
           SPCA+CK+LRRRCA+ C+ APYFP  DP KF I H+VFGASN+ K LQELP  QR DAV 
Sbjct: 32  SPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVN 91

Query: 65  SLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDH 116
           S+VYEA AR+RDPVYGC GAI +LQ QVS+LQ QLA AQ E++ +Q Q+ +
Sbjct: 92  SMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQRSN 142

[Close]

BLAST of Cmc10g0279681 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 152.5 bits (384), Expect = 2.9e-37
Identity = 72/109 (66.06%), Postives = 86/109 (78.90%), Query Frame = 0


Query: 5   SPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAVM 64
           SPCA+CK+LRRRCA  C+ APYFP  DP KF I H+VFGASN+ K LQELP  QR DAV 
Sbjct: 54  SPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVN 113

Query: 65  SLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQ 114
           S+VYEA AR+RDPVYGC GAI +LQ QVS+LQ QLA  Q E++ +Q+Q+
Sbjct: 114 SMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQR 162

[Close]

BLAST of Cmc10g0279681 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 152.5 bits (384), Expect = 2.9e-37
Identity = 72/103 (69.90%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 4   NSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAV 63
           NSPCA+CK LRR+C   CIFAPYFP ++PHKFA VHK+FGASNV+K+L EL   QR DAV
Sbjct: 9   NSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAV 68

Query: 64  MSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 107
            SL YEA ARVRDPVYGCVGAISYLQ QV +LQ +L  A A++
Sbjct: 69  NSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADL 111

The following BLAST results are available for this feature:

BLAST of Cmc10g0279681 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035899.1	2.2e-90	100.00	LOB domain-containing protein 12-like [Cucumis melo var. makuwa] >TYK19054.1 LOB...	[more]
XP_004148190.1	8.2e-90	99.40	LOB domain-containing protein 12 [Cucumis sativus] >KGN50694.1 hypothetical prot...	[more]
XP_038893139.1	5.0e-87	97.60	LOB domain-containing protein 12-like [Benincasa hispida]	[more]
XP_023536420.1	1.6e-85	96.41	LOB domain-containing protein 12-like [Cucurbita pepo subsp. pepo]	[more]
XP_022957028.1	4.6e-85	95.81	LOB domain-containing protein 12-like [Cucurbita moschata] >KAG6600910.1 LOB dom...	[more]

BLAST of Cmc10g0279681 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LBW3	2.6e-54	80.45	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SHE9	1.6e-43	65.41	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q9LQR0	1.1e-36	65.77	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q9SK08	4.1e-36	66.06	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q9FML4	4.1e-36	69.90	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]

BLAST of Cmc10g0279681 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T3C6	1.0e-90	100.00	LOB domain-containing protein 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0KP74	4.0e-90	99.40	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G215140 PE=3 SV...	[more]
A0A6J1GZ19	2.2e-85	95.81	LOB domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111458...	[more]
A0A6J1IJ16	1.1e-84	94.61	LOB domain-containing protein 12-like OS=Cucurbita maxima OX=3661 GN=LOC11147730...	[more]
A0A6J1K2J3	4.4e-81	91.62	LOB domain-containing protein 12-like OS=Cucurbita maxima OX=3661 GN=LOC11149181...	[more]

BLAST of Cmc10g0279681 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30130.1	1.8e-55	80.45	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	1.1e-44	65.41	LOB domain-containing protein 4	[more]
AT1G07900.1	7.7e-38	65.77	LOB domain-containing protein 1	[more]
AT2G28500.1	2.9e-37	66.06	LOB domain-containing protein 11	[more]
AT5G63090.2	2.9e-37	69.90	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 85..105
None	No IPR available	PANTHER	PTHR31301:SF97	LOB DOMAIN-CONTAINING PROTEIN 12-LIKE	coord: 2..116
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 2..116
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 6..103 e-value: 3.7E-42 score: 142.9
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 5..106 score: 26.690853

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0279681.1	Cmc10g0279681.1	mRNA