Cmc10g0278571 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0278571
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
LocationCMiso1.1chr10: 14980302 .. 14980820 (-)
RNA-Seq ExpressionCmc10g0278571
SyntenyCmc10g0278571
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTGAAGAAGAAATATGGGTTTATGAGGCCATGTATTAATTATCGCCAATTAAACAAAGTGATGATAAAGAATAAGTACCTTTTGTGGCAAATAGACGACCTCTTCGACCAATTGAAAGGAGCTTCAATATTCTCTAAAATAGAATTGAGATCGGGATACCACCAATTAAGGATTAAGTACTCAGATGTGACTAAAACAACCTTCAGAACATGTTATGGGCATTATGAGTTTTTGGTAATACCCTTTGGACTAACCAATTCCCCAACATCTTTCATGGATCTAATGAACAGTGTGTTTCATCACTACTTAGATCAGTTTGTCATTATTTTCACCGATGATATTTTGGTTTACTCCCCAACTAGGGAAAGACACGCAGAACATTTGAGAATTGTATTACAAACCTTGCGAGAAGAAAAGTTATTCGCAACATTCAGTAAGTGTGAGTTCTGGCTAAATCCGATAGTGTTTCTTGGACACATTATATCCTTAAAAGGATTGAAGGTAGACTCGTAA

mRNA sequence

ATGTTTGTGAAGAAGAAATATGGGTTTATGAGGCCATGTATTAATTATCGCCAATTAAACAAAGTGATGATAAAGAATAAGTACCTTTTGTGGCAAATAGACGACCTCTTCGACCAATTGAAAGGAGCTTCAATATTCTCTAAAATAGAATTGAGATCGGGATACCACCAATTAAGGATTAAGTACTCAGATGTGACTAAAACAACCTTCAGAACATGTTATGGGCATTATGAGTTTTTGGTAATACCCTTTGGACTAACCAATTCCCCAACATCTTTCATGGATCTAATGAACAGTGTGTTTCATCACTACTTAGATCAGTTTGTCATTATTTTCACCGATGATATTTTGGTTTACTCCCCAACTAGGGAAAGACACGCAGAACATTTGAGAATTGTATTACAAACCTTGCGAGAAGAAAAGTTATTCGCAACATTCAGTAAGTGTGAGTTCTGGCTAAATCCGATAGTGTTTCTTGGACACATTATATCCTTAAAAGGATTGAAGGTAGACTCGTAA

Coding sequence (CDS)

ATGTTTGTGAAGAAGAAATATGGGTTTATGAGGCCATGTATTAATTATCGCCAATTAAACAAAGTGATGATAAAGAATAAGTACCTTTTGTGGCAAATAGACGACCTCTTCGACCAATTGAAAGGAGCTTCAATATTCTCTAAAATAGAATTGAGATCGGGATACCACCAATTAAGGATTAAGTACTCAGATGTGACTAAAACAACCTTCAGAACATGTTATGGGCATTATGAGTTTTTGGTAATACCCTTTGGACTAACCAATTCCCCAACATCTTTCATGGATCTAATGAACAGTGTGTTTCATCACTACTTAGATCAGTTTGTCATTATTTTCACCGATGATATTTTGGTTTACTCCCCAACTAGGGAAAGACACGCAGAACATTTGAGAATTGTATTACAAACCTTGCGAGAAGAAAAGTTATTCGCAACATTCAGTAAGTGTGAGTTCTGGCTAAATCCGATAGTGTTTCTTGGACACATTATATCCTTAAAAGGATTGAAGGTAGACTCGTAA

Protein sequence

MFVKKKYGFMRPCINYRQLNKVMIKNKYLLWQIDDLFDQLKGASIFSKIELRSGYHQLRIKYSDVTKTTFRTCYGHYEFLVIPFGLTNSPTSFMDLMNSVFHHYLDQFVIIFTDDILVYSPTRERHAEHLRIVLQTLREEKLFATFSKCEFWLNPIVFLGHIISLKGLKVDS
Homology
BLAST of Cmc10g0278571 vs. NCBI nr
Match: XP_021621425.1 (uncharacterized protein LOC110621450 [Manihot esculenta])

HSP 1 Score: 268.9 bits (686), Expect = 3.1e-68
Identity = 127/171 (74.27%), Postives = 148/171 (86.55%), Query Frame = 0

Query: 1   MFVKKKYGFMRPCINYRQLNKVMIKNKYLLWQIDDLFDQLKGASIFSKIELRSGYHQLRI 60
           +FVKKK G +R CI+YRQLNKV IKNKY L +IDDLFDQLKGASIFS I+LRSGYHQLR+
Sbjct: 536 LFVKKKEGSLRLCIDYRQLNKVTIKNKYPLPRIDDLFDQLKGASIFSNIDLRSGYHQLRV 595

Query: 61  KYSDVTKTTFRTCYGHYEFLVIPFGLTNSPTSFMDLMNSVFHHYLDQFVIIFTDDILVYS 120
           K +DV KT FRT YGHYEFLV+PFGLTN+P SFMDLMN +FH YLDQFV++F DDILVYS
Sbjct: 596 KGADVPKTAFRTRYGHYEFLVMPFGLTNAPASFMDLMNRIFHPYLDQFVVVFIDDILVYS 655

Query: 121 PTRERHAEHLRIVLQTLREEKLFATFSKCEFWLNPIVFLGHIISLKGLKVD 172
            TRE H  HLRIVLQTLRE++L+A FSKC+FWLN I FLGH++S +G++VD
Sbjct: 656 KTREDHDRHLRIVLQTLREKQLYAKFSKCDFWLNEIAFLGHVVSAEGIRVD 706

BLAST of Cmc10g0278571 vs. NCBI nr
Match: XP_021623882.1 (uncharacterized protein LOC110623266 [Manihot esculenta])

HSP 1 Score: 267.3 bits (682), Expect = 9.1e-68
Identity = 124/171 (72.51%), Postives = 150/171 (87.72%), Query Frame = 0

Query: 1   MFVKKKYGFMRPCINYRQLNKVMIKNKYLLWQIDDLFDQLKGASIFSKIELRSGYHQLRI 60
           +FVKKK G +R CI+YRQLNKV IKNKY L +IDDLFDQLKGAS+FSKI+LRSGYHQL+I
Sbjct: 619 LFVKKKDGTLRLCIDYRQLNKVTIKNKYPLPRIDDLFDQLKGASVFSKIDLRSGYHQLKI 678

Query: 61  KYSDVTKTTFRTCYGHYEFLVIPFGLTNSPTSFMDLMNSVFHHYLDQFVIIFTDDILVYS 120
           K +DV+KT FRT YGHYEFLV+PFGLTN+P +FMDLMN +FH YLDQFV++F DDIL+YS
Sbjct: 679 KETDVSKTAFRTRYGHYEFLVMPFGLTNAPAAFMDLMNRIFHPYLDQFVVVFIDDILIYS 738

Query: 121 PTRERHAEHLRIVLQTLREEKLFATFSKCEFWLNPIVFLGHIISLKGLKVD 172
            T+E H +HLRIVLQTLRE++L+A  SKCEFWLN I FLGH++S +G++VD
Sbjct: 739 KTKEEHDQHLRIVLQTLREKQLYAKLSKCEFWLNDISFLGHVVSAEGIRVD 789

BLAST of Cmc10g0278571 vs. NCBI nr
Match: XP_021603183.1 (uncharacterized protein LOC110608278, partial [Manihot esculenta])

HSP 1 Score: 265.4 bits (677), Expect = 3.4e-67
Identity = 123/171 (71.93%), Postives = 149/171 (87.13%), Query Frame = 0

Query: 1   MFVKKKYGFMRPCINYRQLNKVMIKNKYLLWQIDDLFDQLKGASIFSKIELRSGYHQLRI 60
           +FVKK  G +R CI+YRQLNKV IKNKY L +IDDLFDQLKGAS+FSKI+LRSGYHQL+I
Sbjct: 486 LFVKKNDGTLRLCIDYRQLNKVTIKNKYPLPRIDDLFDQLKGASVFSKIDLRSGYHQLKI 545

Query: 61  KYSDVTKTTFRTCYGHYEFLVIPFGLTNSPTSFMDLMNSVFHHYLDQFVIIFTDDILVYS 120
           K SDV+KT FRT YGHYEFLV+PFGLTN+P +FMDLMN +FH YLDQF+++F DDIL+YS
Sbjct: 546 KESDVSKTAFRTRYGHYEFLVMPFGLTNAPAAFMDLMNRIFHPYLDQFLVVFIDDILIYS 605

Query: 121 PTRERHAEHLRIVLQTLREEKLFATFSKCEFWLNPIVFLGHIISLKGLKVD 172
            T+E H +HLRIVLQTLRE++L+A  SKCEFWLN I FLGH++S +G++VD
Sbjct: 606 KTKEEHDQHLRIVLQTLREKQLYAKLSKCEFWLNDISFLGHVVSAEGIRVD 656

BLAST of Cmc10g0278571 vs. NCBI nr
Match: XP_021609025.1 (uncharacterized protein LOC110612556 [Manihot esculenta])

HSP 1 Score: 262.7 bits (670), Expect = 2.2e-66
Identity = 125/171 (73.10%), Postives = 146/171 (85.38%), Query Frame = 0

Query: 1   MFVKKKYGFMRPCINYRQLNKVMIKNKYLLWQIDDLFDQLKGASIFSKIELRSGYHQLRI 60
           +FVKKK G +R CI+Y QLNKV IKNKY L +IDDLFDQLKGASI SKI+LRSGYHQLR+
Sbjct: 361 LFVKKKDGSLRLCIDYIQLNKVTIKNKYPLPRIDDLFDQLKGASICSKIDLRSGYHQLRV 420

Query: 61  KYSDVTKTTFRTCYGHYEFLVIPFGLTNSPTSFMDLMNSVFHHYLDQFVIIFTDDILVYS 120
           K +DV KT FRT YGHYEFLVIPFGLT +P SFMDLMN +FH YLDQFV++F DDILVYS
Sbjct: 421 KGTDVPKTAFRTRYGHYEFLVIPFGLTKAPASFMDLMNRIFHPYLDQFVVVFIDDILVYS 480

Query: 121 PTRERHAEHLRIVLQTLREEKLFATFSKCEFWLNPIVFLGHIISLKGLKVD 172
            TRE H  HLR+VLQTLRE++L+A FS+C+FWLN I FLGH++S +G+KVD
Sbjct: 481 KTREDHDRHLRVVLQTLREKQLYAKFSRCDFWLNEITFLGHVVSAEGIKVD 531

BLAST of Cmc10g0278571 vs. NCBI nr
Match: KAA0035808.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 262.7 bits (670), Expect = 2.2e-66
Identity = 123/171 (71.93%), Postives = 145/171 (84.80%), Query Frame = 0

Query: 1   MFVKKKYGFMRPCINYRQLNKVMIKNKYLLWQIDDLFDQLKGASIFSKIELRSGYHQLRI 60
           +FVKKK G +R CI+YRQLNKV I+NKY L +IDDLFDQL+GA++FSKI+LRSGYHQL++
Sbjct: 623 LFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKV 682

Query: 61  KYSDVTKTTFRTCYGHYEFLVIPFGLTNSPTSFMDLMNSVFHHYLDQFVIIFTDDILVYS 120
           + SD+TKT FRT YGHYEF V+PFGLTN P  FMDLMN +FH YLDQFVI+F DDILVYS
Sbjct: 683 RESDITKTAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYS 742

Query: 121 PTRERHAEHLRIVLQTLREEKLFATFSKCEFWLNPIVFLGHIISLKGLKVD 172
             RE H EHLRIVLQTLRE +L+A FSKCEFWL  +VFLGH++S KG+ VD
Sbjct: 743 VDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKGVSVD 793

BLAST of Cmc10g0278571 vs. ExPASy Swiss-Prot
Match: P31843 (RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 9.2e-31
Identity = 66/130 (50.77%), Postives = 94/130 (72.31%), Query Frame = 0

Query: 10  MRPCINYRQLNKVMIKNKYLLWQIDDLFDQLKGASIFSKIELRSGYHQLRIKYSDVTKTT 69
           +R CI+YR L KV IKNKY + ++DDLFD+L  A+ F+K++LRSGY Q+RI   D  KTT
Sbjct: 6   LRMCIDYRALTKVTIKNKYPIPRVDDLFDRLAQATWFTKLDLRSGYWQVRIAKGDEPKTT 65

Query: 70  FRTCYGHYEFLVIPFGLTNSPTSFMDLMNSVFHHYLDQFVIIFTDDILV---YSPTRERH 129
             T YG +EF V+PFGLTN+  +F +LMN+V + YLD FV+++ DD++V   YS +   H
Sbjct: 66  CVTRYGSFEFRVMPFGLTNALATFCNLMNNVLYEYLDHFVVVYLDDLVVYTIYSNSLHEH 125

Query: 130 AEHLRIVLQT 137
            +HLR+V ++
Sbjct: 126 IKHLRVVRES 135

BLAST of Cmc10g0278571 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.1e-29
Identity = 61/167 (36.53%), Postives = 104/167 (62.28%), Query Frame = 0

Query: 1   MFVKKKYGFMRPCINYRQLNKVMIKNKYLLWQIDDLFDQLKGASIFSKIELRSGYHQLRI 60
           MFV KK G +R  ++Y+ LNK +  N Y L  I+ L  +++G++IF+K++L+S YH +R+
Sbjct: 453 MFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRV 512

Query: 61  KYSDVTKTTFRTCYGHYEFLVIPFGLTNSPTSFMDLMNSVFHHYLDQFVIIFTDDILVYS 120
           +  D  K  FR   G +E+LV+P+G++ +P  F   +N++     +  V+ + DDIL++S
Sbjct: 513 RKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHS 572

Query: 121 PTRERHAEHLRIVLQTLREEKLFATFSKCEFWLNPIVFLGHIISLKG 168
            +   H +H++ VLQ L+   L    +KCEF  + + F+G+ IS KG
Sbjct: 573 KSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKG 619

BLAST of Cmc10g0278571 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.1e-29
Identity = 61/167 (36.53%), Postives = 104/167 (62.28%), Query Frame = 0

Query: 1   MFVKKKYGFMRPCINYRQLNKVMIKNKYLLWQIDDLFDQLKGASIFSKIELRSGYHQLRI 60
           MFV KK G +R  ++Y+ LNK +  N Y L  I+ L  +++G++IF+K++L+S YH +R+
Sbjct: 453 MFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRV 512

Query: 61  KYSDVTKTTFRTCYGHYEFLVIPFGLTNSPTSFMDLMNSVFHHYLDQFVIIFTDDILVYS 120
           +  D  K  FR   G +E+LV+P+G++ +P  F   +N++     +  V+ + DDIL++S
Sbjct: 513 RKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHS 572

Query: 121 PTRERHAEHLRIVLQTLREEKLFATFSKCEFWLNPIVFLGHIISLKG 168
            +   H +H++ VLQ L+   L    +KCEF  + + F+G+ IS KG
Sbjct: 573 KSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKG 619

BLAST of Cmc10g0278571 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.1e-29
Identity = 61/167 (36.53%), Postives = 104/167 (62.28%), Query Frame = 0

Query: 1   MFVKKKYGFMRPCINYRQLNKVMIKNKYLLWQIDDLFDQLKGASIFSKIELRSGYHQLRI 60
           MFV KK G +R  ++Y+ LNK +  N Y L  I+ L  +++G++IF+K++L+S YH +R+
Sbjct: 453 MFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRV 512

Query: 61  KYSDVTKTTFRTCYGHYEFLVIPFGLTNSPTSFMDLMNSVFHHYLDQFVIIFTDDILVYS 120
           +  D  K  FR   G +E+LV+P+G++ +P  F   +N++     +  V+ + DDIL++S
Sbjct: 513 RKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHS 572

Query: 121 PTRERHAEHLRIVLQTLREEKLFATFSKCEFWLNPIVFLGHIISLKG 168
            +   H +H++ VLQ L+   L    +KCEF  + + F+G+ IS KG
Sbjct: 573 KSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKG 619

BLAST of Cmc10g0278571 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.1e-29
Identity = 61/167 (36.53%), Postives = 104/167 (62.28%), Query Frame = 0

Query: 1   MFVKKKYGFMRPCINYRQLNKVMIKNKYLLWQIDDLFDQLKGASIFSKIELRSGYHQLRI 60
           MFV KK G +R  ++Y+ LNK +  N Y L  I+ L  +++G++IF+K++L+S YH +R+
Sbjct: 453 MFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRV 512

Query: 61  KYSDVTKTTFRTCYGHYEFLVIPFGLTNSPTSFMDLMNSVFHHYLDQFVIIFTDDILVYS 120
           +  D  K  FR   G +E+LV+P+G++ +P  F   +N++     +  V+ + DDIL++S
Sbjct: 513 RKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHS 572

Query: 121 PTRERHAEHLRIVLQTLREEKLFATFSKCEFWLNPIVFLGHIISLKG 168
            +   H +H++ VLQ L+   L    +KCEF  + + F+G+ IS KG
Sbjct: 573 KSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKG 619

BLAST of Cmc10g0278571 vs. ExPASy TrEMBL
Match: A0A5A7TP97 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001420 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.1e-66
Identity = 122/171 (71.35%), Postives = 147/171 (85.96%), Query Frame = 0

Query: 1   MFVKKKYGFMRPCINYRQLNKVMIKNKYLLWQIDDLFDQLKGASIFSKIELRSGYHQLRI 60
           +FVKKK G +R CI+YRQLNKV I+NKY L +IDDLFDQL+GA++FSKI+LRSGYHQL++
Sbjct: 660 LFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKV 719

Query: 61  KYSDVTKTTFRTCYGHYEFLVIPFGLTNSPTSFMDLMNSVFHHYLDQFVIIFTDDILVYS 120
           + SD+ KT+FRT YGHYEF V+PFGLTN+P  FMDLMN +FH YLDQFVI+F DDILVYS
Sbjct: 720 RESDIAKTSFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYS 779

Query: 121 PTRERHAEHLRIVLQTLREEKLFATFSKCEFWLNPIVFLGHIISLKGLKVD 172
             RE H EHLRIVLQTLRE++L+A FSKCEFWL  +VFLGH++S KG+ VD
Sbjct: 780 VDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVD 830

BLAST of Cmc10g0278571 vs. ExPASy TrEMBL
Match: A0A5A7SZ16 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00980 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.1e-66
Identity = 123/171 (71.93%), Postives = 145/171 (84.80%), Query Frame = 0

Query: 1   MFVKKKYGFMRPCINYRQLNKVMIKNKYLLWQIDDLFDQLKGASIFSKIELRSGYHQLRI 60
           +FVKKK G +R CI+YRQLNKV I+NKY L +IDDLFDQL+GA++FSKI+LRSGYHQL++
Sbjct: 623 LFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKV 682

Query: 61  KYSDVTKTTFRTCYGHYEFLVIPFGLTNSPTSFMDLMNSVFHHYLDQFVIIFTDDILVYS 120
           + SD+TKT FRT YGHYEF V+PFGLTN P  FMDLMN +FH YLDQFVI+F DDILVYS
Sbjct: 683 RESDITKTAFRTRYGHYEFRVMPFGLTNVPAVFMDLMNRIFHRYLDQFVIVFIDDILVYS 742

Query: 121 PTRERHAEHLRIVLQTLREEKLFATFSKCEFWLNPIVFLGHIISLKGLKVD 172
             RE H EHLRIVLQTLRE +L+A FSKCEFWL  +VFLGH++S KG+ VD
Sbjct: 743 VDRESHEEHLRIVLQTLRENQLYAKFSKCEFWLKQVVFLGHVVSAKGVSVD 793

BLAST of Cmc10g0278571 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.4e-66
Identity = 122/171 (71.35%), Postives = 146/171 (85.38%), Query Frame = 0

Query: 1   MFVKKKYGFMRPCINYRQLNKVMIKNKYLLWQIDDLFDQLKGASIFSKIELRSGYHQLRI 60
           +FVKKK G +R CI+YRQLNKV I+NKY L +IDDLFDQL+GA++FSKI+LRSGYHQL++
Sbjct: 660 LFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKV 719

Query: 61  KYSDVTKTTFRTCYGHYEFLVIPFGLTNSPTSFMDLMNSVFHHYLDQFVIIFTDDILVYS 120
           + SD+ KT FRT YGHYEF V+PFGLTN+P  FMDLMN +FH YLDQFVI+F DDILVYS
Sbjct: 720 RESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYS 779

Query: 121 PTRERHAEHLRIVLQTLREEKLFATFSKCEFWLNPIVFLGHIISLKGLKVD 172
             RE H EHLRIVLQTLRE++L+A FSKCEFWL  +VFLGH++S KG+ VD
Sbjct: 780 VDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVD 830

BLAST of Cmc10g0278571 vs. ExPASy TrEMBL
Match: A0A5D3BS67 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold509G00050 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.4e-66
Identity = 122/171 (71.35%), Postives = 146/171 (85.38%), Query Frame = 0

Query: 1   MFVKKKYGFMRPCINYRQLNKVMIKNKYLLWQIDDLFDQLKGASIFSKIELRSGYHQLRI 60
           +FVKKK G +R CI+YRQLNKV I+NKY L +IDDLFDQL+GA++FSKI+LRSGYHQL++
Sbjct: 698 LFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKV 757

Query: 61  KYSDVTKTTFRTCYGHYEFLVIPFGLTNSPTSFMDLMNSVFHHYLDQFVIIFTDDILVYS 120
           + SD+ KT FRT YGHYEF V+PFGLTN+P  FMDLMN +FH YLDQFVI+F DDILVYS
Sbjct: 758 RESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYS 817

Query: 121 PTRERHAEHLRIVLQTLREEKLFATFSKCEFWLNPIVFLGHIISLKGLKVD 172
             RE H EHLRIVLQTLRE++L+A FSKCEFWL  +VFLGH++S KG+ VD
Sbjct: 818 VDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVD 868

BLAST of Cmc10g0278571 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.4e-66
Identity = 122/171 (71.35%), Postives = 146/171 (85.38%), Query Frame = 0

Query: 1   MFVKKKYGFMRPCINYRQLNKVMIKNKYLLWQIDDLFDQLKGASIFSKIELRSGYHQLRI 60
           +FVKKK G +R CI+YRQLNKV I+NKY L +IDDLFDQL+GA++FSKI+LRSGYHQL++
Sbjct: 698 LFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKV 757

Query: 61  KYSDVTKTTFRTCYGHYEFLVIPFGLTNSPTSFMDLMNSVFHHYLDQFVIIFTDDILVYS 120
           + SD+ KT FRT YGHYEF V+PFGLTN+P  FMDLMN +FH YLDQFVI+F DDILVYS
Sbjct: 758 RESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYS 817

Query: 121 PTRERHAEHLRIVLQTLREEKLFATFSKCEFWLNPIVFLGHIISLKGLKVD 172
             RE H EHLRIVLQTLRE++L+A FSKCEFWL  +VFLGH++S KG+ VD
Sbjct: 818 VDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVD 868

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_021621425.13.1e-6874.27uncharacterized protein LOC110621450 [Manihot esculenta][more]
XP_021623882.19.1e-6872.51uncharacterized protein LOC110623266 [Manihot esculenta][more]
XP_021603183.13.4e-6771.93uncharacterized protein LOC110608278, partial [Manihot esculenta][more]
XP_021609025.12.2e-6673.10uncharacterized protein LOC110612556 [Manihot esculenta][more]
KAA0035808.12.2e-6671.93DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
P318439.2e-3150.77RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1[more]
P0CT415.1e-2936.53Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
P0CT345.1e-2936.53Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT355.1e-2936.53Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT365.1e-2936.53Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
Match NameE-valueIdentityDescription
A0A5A7TP971.1e-6671.35Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold31... [more]
A0A5A7SZ161.1e-6671.93Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40... [more]
A0A5A7U2V71.4e-6671.35Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37... [more]
A0A5D3BS671.4e-6671.35Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold50... [more]
A0A5D3BHI11.4e-6671.35Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 28..163
e-value: 1.8E-60
score: 205.9
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 4..163
e-value: 9.8E-24
score: 84.1
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..163
score: 12.032463
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 1..88
e-value: 1.8E-60
score: 205.9
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 3..168
NoneNo IPR availablePANTHERPTHR24559:SF324TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEINcoord: 3..168
NoneNo IPR availableCDDcd01647RT_LTRcoord: 1..163
e-value: 7.6134E-69
score: 204.752
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 2..171

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0278571.1Cmc10g0278571.1mRNA