Cmc10g0277891 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTGCTGATTTATGTTATGGCTCATCAATAGAACCCACATCTGTTGAAAGTGCTCTCAAGGATGAATACTGGATAAACACCATGCAAGAAGAATTACTTCAATTTAAGCGTAACAATGTGTGGACCTTGGTTCCTAAGCTTGATGGGATGAATGTTATAGGAACTAAGTGGATTTTTAAGAATAAAATTGATGAATCAGGGTATGTAACAAAGAACAAAGCTCGTTTGATGACTCAAGGTTATGCTCAGGTAGAAGGTATTGACTTTGATGAAACTTTTGCACCTGTTGCCAAACTTTGA ATGATTGCTGATTTATGTTATGGCTCATCAATAGAACCCACATCTGTTGAAAGTGCTCTCAAGGATGAATACTGGATAAACACCATGCAAGAAGAATTACTTCAATTTAAGCGTAACAATGTGTGGACCTTGGTTCCTAAGCTTGATGGGATGAATGTTATAGGAACTAAGTGGATTTTTAAGAATAAAATTGATGAATCAGGGTATGTAACAAAGAACAAAGCTCGTTTGATGACTCAAGGTTATGCTCAGGTAGAAGGTATTGACTTTGATGAAACTTTTGCACCTGTTGCCAAACTTTGA ATGATTGCTGATTTATGTTATGGCTCATCAATAGAACCCACATCTGTTGAAAGTGCTCTCAAGGATGAATACTGGATAAACACCATGCAAGAAGAATTACTTCAATTTAAGCGTAACAATGTGTGGACCTTGGTTCCTAAGCTTGATGGGATGAATGTTATAGGAACTAAGTGGATTTTTAAGAATAAAATTGATGAATCAGGGTATGTAACAAAGAACAAAGCTCGTTTGATGACTCAAGGTTATGCTCAGGTAGAAGGTATTGACTTTGATGAAACTTTTGCACCTGTTGCCAAACTTTGA MIADLCYGSSIEPTSVESALKDEYWINTMQEELLQFKRNNVWTLVPKLDGMNVIGTKWIFKNKIDESGYVTKNKARLMTQGYAQVEGIDFDETFAPVAKL Homology
BLAST of Cmc10g0277891 vs. NCBI nr
Match: KAA0067027.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK26263.1 putative mitochondrial protein [Cucumis melo var. makuwa]) HSP 1 Score: 205.3 bits (521), Expect = 2.5e-49 Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of Cmc10g0277891 vs. NCBI nr
Match: KAA0038418.1 (gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 179.5 bits (454), Expect = 1.4e-41 Identity = 84/100 (84.00%), Postives = 92/100 (92.00%), Query Frame = 0
BLAST of Cmc10g0277891 vs. NCBI nr
Match: KAA0035514.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK31017.1 gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 179.5 bits (454), Expect = 1.4e-41 Identity = 85/100 (85.00%), Postives = 91/100 (91.00%), Query Frame = 0
BLAST of Cmc10g0277891 vs. NCBI nr
Match: TYJ96974.1 (gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 176.8 bits (447), Expect = 9.4e-41 Identity = 83/99 (83.84%), Postives = 91/99 (91.92%), Query Frame = 0
BLAST of Cmc10g0277891 vs. NCBI nr
Match: KAA0060315.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK22065.1 gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 176.4 bits (446), Expect = 1.2e-40 Identity = 85/100 (85.00%), Postives = 91/100 (91.00%), Query Frame = 0
BLAST of Cmc10g0277891 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 4.4e-17 Identity = 42/88 (47.73%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of Cmc10g0277891 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.0e-13 Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = 0
BLAST of Cmc10g0277891 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 4.3e-12 Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of Cmc10g0277891 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 69.7 bits (169), Expect = 2.1e-11 Identity = 29/76 (38.16%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of Cmc10g0277891 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 2.3e-10 Identity = 34/92 (36.96%), Postives = 52/92 (56.52%), Query Frame = 0
BLAST of Cmc10g0277891 vs. ExPASy TrEMBL
Match: A0A5D3DRJ5 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00280 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.2e-49 Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of Cmc10g0277891 vs. ExPASy TrEMBL
Match: A0A5D3E4L4 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002660 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 7.0e-42 Identity = 85/100 (85.00%), Postives = 91/100 (91.00%), Query Frame = 0
BLAST of Cmc10g0277891 vs. ExPASy TrEMBL
Match: A0A5A7T6D6 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G003170 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 7.0e-42 Identity = 84/100 (84.00%), Postives = 92/100 (92.00%), Query Frame = 0
BLAST of Cmc10g0277891 vs. ExPASy TrEMBL
Match: A0A5D3BD92 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00180 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 4.5e-41 Identity = 83/99 (83.84%), Postives = 91/99 (91.92%), Query Frame = 0
BLAST of Cmc10g0277891 vs. ExPASy TrEMBL
Match: A0A5A7V365 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00460 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 5.9e-41 Identity = 85/100 (85.00%), Postives = 91/100 (91.00%), Query Frame = 0
BLAST of Cmc10g0277891 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) ) HSP 1 Score: 88.6 bits (218), Expect = 3.1e-18 Identity = 42/88 (47.73%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of Cmc10g0277891 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 ) HSP 1 Score: 75.1 bits (183), Expect = 3.6e-14 Identity = 34/96 (35.42%), Postives = 52/96 (54.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
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