Cmc10g0277711 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0277711
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	major pollen allergen Ole e 6-like
Location	CMiso1.1chr10: 13524918 .. 13525697 (-)
RNA-Seq Expression	Cmc10g0277711
Synteny	Cmc10g0277711

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGCATCCTTTCCAGAACTTCATCCACTCACAAAAGCAAGACTTGAAACATCACCAAAAGGCAAGAACACCCACCAAAGCCAAGAATAAAAAGGAAAAAAATGGCCAAGAAAATGATTGCATTGTTCTTGATGTGCATTGTTGTGGTAGCTGCTTTGCAATTTGCCAGTGCCAACAAGGAGGATGAAGTGGCCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGCTTTAAAACCTGTGAGAAGGAATGTCTAGAAAATGGCAGTGGCCAAAGCTATTGTGAAGTTAAATGTGACGAAGATTGCAATGAAAAAGAAGTTGCTGGTACTCTCTCTCCCTTCTCTCTATCTTCAATCTTAAATTATTTATTTCTGCAATATTTTCATCCATTCTTCACTCGTCTATGAGTTCTAGATCAATATACAAGAAACGCATCAACTTTTTCATCGATTTTATGTATTTTTTTTTGTAAATTTAGTAGAGTTTTCTCTTTTCATATTAATTTCACATTGTTGTGTGTGTTTTTCTTTCTTCTTTTTACAGATAAGCTACACATTGAATTGCATTGAATAAGGAGAAACAAAAGGAAAGAAGACCTCTCTTGAGAAAGAAGGATCTAGCAATACTATATCAAAATCAAACTTGTGATTTGATTTTAATATTAAAATCCATAAAGTTCTTGGCCTTTGGTGTTATCAATATGTGAATTGACCATTTTGTCATTCTGATCGAGCCTTATTTTTATTCCAAAAAAAGTTTATATTTATAATTGTG

mRNA sequence

TTGGCATCCTTTCCAGAACTTCATCCACTCACAAAAGCAAGACTTGAAACATCACCAAAAGGCAAGAACACCCACCAAAGCCAAGAATAAAAAGGAAAAAAATGGCCAAGAAAATGATTGCATTGTTCTTGATGTGCATTGTTGTGGTAGCTGCTTTGCAATTTGCCAGTGCCAACAAGGAGGATGAAGTGGCCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGCTTTAAAACCTGTGAGAAGGAATGTCTAGAAAATGGCAGTGGCCAAAGCTATTGTGAAGTTAAATGTGACGAAGATTGCAATGAAAAAGAAGTTGCTGATAAGCTACACATTGAATTGCATTGAATAAGGAGAAACAAAAGGAAAGAAGACCTCTCTTGAGAAAGAAGGATCTAGCAATACTATATCAAAATCAAACTTGTGATTTGATTTTAATATTAAAATCCATAAAGTTCTTGGCCTTTGGTGTTATCAATATGTGAATTGACCATTTTGTCATTCTGATCGAGCCTTATTTTTATTCCAAAAAAAGTTTATATTTATAATTGTG

Coding sequence (CDS)

ATGGCCAAGAAAATGATTGCATTGTTCTTGATGTGCATTGTTGTGGTAGCTGCTTTGCAATTTGCCAGTGCCAACAAGGAGGATGAAGTGGCCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGCTTTAAAACCTGTGAGAAGGAATGTCTAGAAAATGGCAGTGGCCAAAGCTATTGTGAAGTTAAATGTGACGAAGATTGCAATGAAAAAGAAGTTGCTGATAAGCTACACATTGAATTGCATTGA

Protein sequence

MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQSYCEVKCDEDCNEKEVADKLHIELH

Homology

[Close]

BLAST of Cmc10g0277711 vs. NCBI nr
Match: XP_008456958.1 (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] >TYJ96804.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 167.9 bits (424), Expect = 3.7e-38
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60
          MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 YCEVKCDEDCNEKEVADKLHIELH 85
          YCEVKCDEDCNEKEVADKLHIELH
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIELH 84

[Close]

BLAST of Cmc10g0277711 vs. NCBI nr
Match: XP_004146471.1 (major pollen allergen Ole e 6 [Cucumis sativus] >KGN50739.1 hypothetical protein Csa_005859 [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 3.0e-32
Identity = 76/84 (90.48%), Postives = 79/84 (94.05%), Query Frame = 0


Query: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60
          MA KMIALFLMCIVVVAALQFA+ANKED VAKYEAKFDAKYKSCF+TCEKECL  GSGQS
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKED-VAKYEAKFDAKYKSCFETCEKECLRYGSGQS 60

Query: 61 YCEVKCDEDCNEKEVADKLHIELH 85
          YCEVKCDEDC+EKE ADKLHIELH
Sbjct: 61 YCEVKCDEDCDEKEAADKLHIELH 83

[Close]

BLAST of Cmc10g0277711 vs. NCBI nr
Match: XP_038891517.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31
Identity = 73/84 (86.90%), Postives = 81/84 (96.43%), Query Frame = 0


Query: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60
          MAKKM+A+FLMCIVVVAALQFA+AN EDEV KYEAKFDAKYKSC++TCEKECL NGSGQS
Sbjct: 1  MAKKMMAVFLMCIVVVAALQFATAN-EDEVTKYEAKFDAKYKSCYETCEKECLANGSGQS 60

Query: 61 YCEVKCDEDCNEKEVADKLHIELH 85
          +CEVKCDEDC+EKEVADKLHI+LH
Sbjct: 61 FCEVKCDEDCDEKEVADKLHIKLH 83

[Close]

BLAST of Cmc10g0277711 vs. NCBI nr
Match: XP_038875643.1 (major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 140.6 bits (353), Expect = 6.3e-30
Identity = 70/84 (83.33%), Postives = 79/84 (94.05%), Query Frame = 0


Query: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60
          MAKKMIA+F MCIVV+AALQFA+AN  +EV KYEAKFDAKYKSC++TCEKECLENGSGQ+
Sbjct: 1  MAKKMIAVFFMCIVVMAALQFATAN--EEVDKYEAKFDAKYKSCYETCEKECLENGSGQT 60

Query: 61 YCEVKCDEDCNEKEVADKLHIELH 85
          +CEVKCDEDC+EKE ADKLHIELH
Sbjct: 61 FCEVKCDEDCDEKEKADKLHIELH 82

[Close]

BLAST of Cmc10g0277711 vs. NCBI nr
Match: KGN46520.1 (hypothetical protein Csa_005728 [Cucumis sativus])

HSP 1 Score: 135.6 bits (340), Expect = 2.0e-28
Identity = 67/85 (78.82%), Postives = 76/85 (89.41%), Query Frame = 0


Query: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENG-SGQ 60
          MAKKM+A+FLMCIVVVA LQF  AN+ED V KYEAKFDAKYKSC++TCEKECL N  +G+
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60

Query: 61 SYCEVKCDEDCNEKEVADKLHIELH 85
          S+CEVKCDEDC+EKE ADKLHIELH
Sbjct: 61 SFCEVKCDEDCSEKEAADKLHIELH 85

[Close]

BLAST of Cmc10g0277711 vs. ExPASy Swiss-Prot
Match: O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.7e-07
Identity = 21/42 (50.00%), Postives = 33/42 (78.57%), Query Frame = 0


Query: 38 DAKYKSCFKTCEKECLENGSGQSYCEVKCDEDCNEKEVADKL 80
          +A++K C+ TC KEC + G+G ++CE+KCD DC+ K+V +KL
Sbjct: 2  EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKL 43

[Close]

BLAST of Cmc10g0277711 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.8e-38
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60
          MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 YCEVKCDEDCNEKEVADKLHIELH 85
          YCEVKCDEDCNEKEVADKLHIELH
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIELH 84

[Close]

BLAST of Cmc10g0277711 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.8e-38
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60
          MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 YCEVKCDEDCNEKEVADKLHIELH 85
          YCEVKCDEDCNEKEVADKLHIELH
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIELH 84

[Close]

BLAST of Cmc10g0277711 vs. ExPASy TrEMBL
Match: A0A0A0KPA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.5e-32
Identity = 76/84 (90.48%), Postives = 79/84 (94.05%), Query Frame = 0


Query: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60
          MA KMIALFLMCIVVVAALQFA+ANKED VAKYEAKFDAKYKSCF+TCEKECL  GSGQS
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKED-VAKYEAKFDAKYKSCFETCEKECLRYGSGQS 60

Query: 61 YCEVKCDEDCNEKEVADKLHIELH 85
          YCEVKCDEDC+EKE ADKLHIELH
Sbjct: 61 YCEVKCDEDCDEKEAADKLHIELH 83

[Close]

BLAST of Cmc10g0277711 vs. ExPASy TrEMBL
Match: A0A0A0K9Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 9.7e-29
Identity = 67/85 (78.82%), Postives = 76/85 (89.41%), Query Frame = 0


Query: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENG-SGQ 60
          MAKKM+A+FLMCIVVVA LQF  AN+ED V KYEAKFDAKYKSC++TCEKECL N  +G+
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60

Query: 61 SYCEVKCDEDCNEKEVADKLHIELH 85
          S+CEVKCDEDC+EKE ADKLHIELH
Sbjct: 61 SFCEVKCDEDCSEKEAADKLHIELH 85

[Close]

BLAST of Cmc10g0277711 vs. ExPASy TrEMBL
Match: A0A0A0KDP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.3e-28
Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60
          MAKKM+A+FLMCIVVV +LQFA+ANKE EVA YEAKFDAKYK+CF TCEKEC+E GSG S
Sbjct: 1  MAKKMMAVFLMCIVVVTSLQFATANKEYEVASYEAKFDAKYKACFVTCEKECIERGSGHS 60

Query: 61 YCEVKCDEDCNEKEVADKLHI 82
          YCEVKCDEDC  KE ADKLHI
Sbjct: 61 YCEVKCDEDCGAKEAADKLHI 81

The following BLAST results are available for this feature:

BLAST of Cmc10g0277711 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456958.1	3.7e-38	100.00	PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major...	[more]
XP_004146471.1	3.0e-32	90.48	major pollen allergen Ole e 6 [Cucumis sativus] >KGN50739.1 hypothetical protein...	[more]
XP_038891517.1	1.1e-31	86.90	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_038875643.1	6.3e-30	83.33	major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pol...	[more]
KGN46520.1	2.0e-28	78.82	hypothetical protein Csa_005728 [Cucumis sativus]	[more]

BLAST of Cmc10g0277711 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24172	2.7e-07	50.00	Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1	[more]

BLAST of Cmc10g0277711 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BCS2	1.8e-38	100.00	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C530	1.8e-38	100.00	major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ...	[more]
A0A0A0KPA7	1.5e-32	90.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1	[more]
A0A0A0K9Z9	9.7e-29	78.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1	[more]
A0A0A0KDP7	1.3e-28	81.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1	[more]

BLAST of Cmc10g0277711 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015333	Pollen allergen ole e 6	PFAM	PF09253	Ole_e_6	coord: 44..80 e-value: 5.6E-12 score: 45.4
IPR015333	Pollen allergen ole e 6	PANTHER	PTHR35632	MAJOR POLLEN ALLERGEN OLE E 6-LIKE	coord: 1..84
IPR036466	Pollen allergen ole e 6 superfamily	GENE3D	1.10.287.720	Pollen allergen ole e 6	coord: 38..82 e-value: 3.8E-16 score: 60.3
IPR036466	Pollen allergen ole e 6 superfamily	SUPERFAMILY	111388	Pollen allergen ole e 6	coord: 38..79
None	No IPR available	PANTHER	PTHR35632:SF5	SUBFAMILY NOT NAMED	coord: 1..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0277711.1	Cmc10g0277711.1	mRNA