Cmc10g0277091 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0277091
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
LocationCMiso1.1chr10: 12605068 .. 12609961 (+)
RNA-Seq ExpressionCmc10g0277091
SyntenyCmc10g0277091
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTACTTAGATTCCTTGGGCAAACACTGATAATGCAGATAAAGCAACAAAAGAAAGAAGGAAAAACAAAGGAAAACGAACTAGATGAGACAGGCAAAAGACTGCATACTTAAGTTCTACGGAGAGAACGAACCCGATCCCAAATCAAGTTTCTTTCCCAATCTGCAATATCCTCAAATGCATTATCTGGAAGGCTCTCAAATGGTTCCTTCCATGGATCATTTTTAGATAGATCGTATGTCGCTCCACGGATCGCTCTTTTACTTGGTCCACAAGGTCTTTTAGAGGTCAGTGCTTCATATGCTGTATTTAACTGTCACATAGGCAAAAGAAGAACCCAATGAGTCGGTAACTTCATTGCAAAACTGGTGAAGAAGCCTTTGCAAGTAAGTAAACATTAACATTTATATGCTAGCAGTTTAGAAAGGAAATGTTGATATAGATTTCGTATCTTTTTTTCCCTCTAAACAATAGGTTCTAGCCTCAAAAATTGTGTAGGGCGGGCATTTTAAATTTAGAACAAAAGTTTCAAAGGAAAAAAGAACTTACATTCATTCCGCAAAACCAATACAAGTAGGCTATTGCAACGGCCGGGGCTCTTCCAAGTCCAGCAGTGCAATGCACATATACTTTTCCTTTGCCCTTTGAAATTGCCCATTCTAACAAGGAAACAGCTTTAGGCAATCCAGTTCTCAGGGAATCAGGATCGAAATCTTTTGCCTAACAAAGAACAAGTTAATTCAACGTGTAAGTAGATAACAAATAAGCCTACAAATTCACAAGGGTTGATACGTTGCTTCAAGAGAAACTAATTAATCACTTCTATTGCATACTTTTTTCGTTCCTTTCTCTTTTCCTATTTTAGGTTCTTAATGTAGGGAAAGCTCAAAAGAAACTAAATGAGAAAAAGATTATGCATTTGGTGAAGTCTGTTAATAGTATATATTTATAGGAGCTTATTAGTCTTTTGTCATTTATTGCATAGAAATGCAATAAGGAGTTTTTTCATATTTAGCTCCAACTTCAACATGGTATTAGAGTTGTGTAGGGTTTAGAATATTTGTTTGACGGTTACTTTAGGGTTTGCTCCTCACGAATTTTGGGTGCATTTGGATCATCGGTTTGAGTGACCATTTTTCGACACCGCCCAACCCAGATAGAGCGTCGCCGTATTCCGTCCTGCCGTTTTCGTCATTGGAAAACACCGTGCGTGAGGCTCATGCACCTTCAGAAGGTCTCCGTCTCCATTGCCACGTGCCAGTGCATGGGAGCGTGTGGAAGCTCCGTTTTGTGCTTCGTCGGTTGGGTTCATCTTAGATCTTGGTTTTCAGTCAACTTGTGCCTTCGGCATTGAAATCCACTCGAGAGTGACGATATTTGAAGAAAATCTGTTTGTTTCTAGGTGTTGTAGCTGATTCGTTCTATTTGGTGGGTAATTTTAGCTCGTTTTGTGGTTGTTTTTCCTCATTTGGTTTGATGTGGCTTGTTGGTGTGGTTCCTATCCTATGACCAAACAAGATCCCATGCAGATGCCTAATTTGGTTCAATTGCAAGCTTAATCTATTCATGGTTTGTCGATTTAGTACCAAAACTCGTCGATAGCATCTCCTTCGTCAATGGCATGTGCCCCTATTACAACCATTGCTAATTCAGGTAACATGAATCATTGTCTCCTTTCCTCCTCTACACGGGGGTCTATACACAGTGGGTCATAGACCCCAGTGCTACTACTCATATGACAGGTAATCCCAAATTATTTTCTAAAATTTTGTCATCTACATCCATTACCATTGTTACCTTAGCAAATGGATCAAAGTCTTCTGTTATTGGATTTGGCACTGTAAATCTCACCCCATACTACTTTTCATTTGTCCTACATTTACCTTATTTGTCATTTTACTTGATCTCTACTAGTCAAATCACTCGTGACCTTAATTGTTGTGTCTCATTCTATCTTGGCTATTGCTTGTTTCAGGATCTTGTAACAAAGAAGGTTATTGGGAAAGGACATGAATCTAGAGGACTTTACATTTTTGAAGACCAAGTATCGACATCAACAATTGTTGTTTGTTCTGGAGTTGTTTCTCCTTTTAATGCCCCATTATCGTTTGTTCATCCATCTCTCTCGGTCTTAAGAAAACTTTGTCCTCAATTTCATAACTTATCTTTGTTGAATTGTGACTCATGTCAGTTTGCCAAATTTTATCGTCTTAGCTCCAATCCTAGAGTTCATAAACGGGCAAATTCCCTTTTCGAGGTAGTTCATTTTGATATTTGGATCCATGTTTAGTTGAGTTCAAAACTGGATTTTGATATTTTGTTACCTTTGTTGATGATCACTCTCACATGACTTTGCGTATTTTTATAAAAATTGTTCTAAGTTACTTTCTCATTTCTGCAATTTCCATGCTAAAATCGAACTCAGTTTAGTGTGTTCAAAAACCTTGAGAACTGACAATGTCAGTGAGTTTTTTCATAAGCTCTTATGTCGTACCTTTGTATACATGGAATCATTCACCAATCATCTTGGGCTGATACTCCATCCCAAAATGGGGTTGCAGAATGAAAGAATACAAATCTGCTTGAAACTGCACGGGCACTATCCTTTCAAATGCATGTTCCAAACCATTTTTGGGTTGATACAATTTCAACTTGTTTTCTTATAAATCGAATGCCTTCATCTGCTCTTCAAGGTTAGACTCCTTATCATGTTCTCTTTCCAACAAAAAGATTGTTTCCTATTGAACCTAAATTTGGTTGTACTTGTTTTGTTTGAGATGTTCGTCGTAATTGACAATGTTAGACCCCAAGTCTTTGAAGTGCATTTTCTTAAGCTATTCTTGTGTTAAAAAATAATATAAATGTTATTGTCCAAGTTTAAGTAGATATTCTGTATCTCGAGACGTTACTTTTTTTTAGGATAAGGTTTTTACTACCCTTTTGCCTAGTATGAGTCAGGGGGAGGAGGAGGAGGATTTTTTATTTACACTCTCACTTCTCCAACTCCCTCCCCTGATCTGTCTCCTCTAGCGTTTGACTCCAATCATCCACCTATAACTAAAGTCTACTCTCGTCGACAACAACCTCCAGGTGAATATTATGTCCCAAAAGACCAATTGTTATCGGATCCAGGACCAAGTAATGAGCTTCCCATTGCCTTTCGTAAAGTTAAATGTTCTTGTATTTAATCTATTGTTTCTTATGTATCTTATGAGCAATTATCATCTCATACACGTTCGTTTGTTAAATCTCTTGGCTCTATCTCAATACCTAAGACCATTCATGAAGCTTTGACTCATTCTAGGAGACAGTGCAATGATTGAAGAGGTTAATGCCTTAGATGATATTGTACTTGGGATCTTTTCCTGTAGGAAAGAAGACTATTGGGTGCAAATGGGTGTTTGCAGGTAAGGTTAATCTCGATGGATCAATAGCTCGTTTAAAAGCACGCCTTGTGGCTAAAGGTTATGCTCAAATGTATGAGATTGACTATATTGATACATTCTCTCCTATTACTAAGCTCATTTGTGTTAGGTTATTCATTTCTCTGGCAGTATCTCACATCAGCTTGACATTAAAAATGTCTTTCACTACGTGATCTTCAACAGGAAGTCTATATGGAGAAACCACTTGGGTTTATTGCTCAAAGGGAGAATGATAAAGTGTGTCGTCTTGACAAATCCTTGTACAAGTTGAAGCAAAGTCCACATGCATGGTTTGGAAAATTTAGTCAAACACTTAGCAGTTTGGAATAAAGAAAAGCAAATTGAATCACTTAGTTTTCTATTGAAGATCTATGCATGGAATTATTCTACCTGTTGTACATGTTGAGGATATCTTTATAACCAACAATGATACATCAGGTATGTTGTCTCTTAAATCTTTCCTCCAAAATCAATTTCACACTAAAGATTTAGGAGTGGTAAAGTACTTTTTGGGCATTGAAGTAATGAGAAGCAAGGGTATTCTTATGTCACAGAGAAAATATGTGCTTGATTGACTGTCGGAGATAGGAAAATTGGGAACCAAGCCATGCAGTACTCTGATGATGCCTAGTCTACTTTTAAAAGATGGAGAACCATTTAAGGATCCTGAGAGATAGAGACTGGTTGGGAAGTTGAATTACCCTATCGTAACACATCCAAACATAGCTTATTTGGTAAGTGCTGTAAGCCAGTTTATGACCTTACCCAGAGTTAAACATTGGGATGCAACACAACAGATTCTATGTTACCTTAAGGCTGCACCTGGACATGTGATCTTACATAAAGATCATGATCATATGAACATTGAATGTTTTTCAGATGCTGATTGGGCACGATGAAAAAAAGACAAAAGATCAACTTCTGAGTATAGTGTTTCTGTTGGAGACAATTTGGTTTCATGGAAGAGTAAGAAACAAAATGTAGCTTCCATCAAGTGCTGAGTTAGAATATAGAGCAATGGGATAATCAATGTGTGAAATAATATTGTTACATCAACTCTTGATTGAGTTGGGCTTTAACACAACAATTTTGACTAAGTTGTGGCGTGACAATCAAGCTGCTCTCCATATCGCATAGCATCTAACCCAAAATTTCATGAGCGTACTAAACAAATTGAGATTCGTTATCATTTTGTTGGGGAAAAAGTACAACAAAGCTTGGGGTCTATTGAATATGTGAAGACTGGAAAACAAATAGGAGATATCTTTACAAAAGTTTTGAATGGAGCTCGAATAGACGACCCATGTAACAAGTTGGGCATGATTATATGCTTTCGTTTGAGGGGCAGTGTTATGGTATACATAATTATACAAGCTTATTAGTTTTTTGCTTTTAATGTAATTTACTGATCTTTATTCAGGGTTTCCATGTATGCCTATATATATTGAATTCTATTGTATAGAATGCATC

mRNA sequence

TGTACTTAGATTCCTTGGGCAAACACTGATAATGCAGATAAAGCAACAAAAGAAAGAAGGAAAAACAAAGGAAAACGAACTAGATGAGACAGGCAAAAGACTGCATACTTAAGTTCTACGGAGAGAACGAACCCGATCCCAAATCAAGTTTCTTTCCCAATCTGCAATATCCTCAAATGCATTATCTGGAAGGCTCTCAAATGGTTCCTTCCATGGATCATTTTTAGATAGATCGTATGTCGCTCCACGGATCGCTCTTTTACTTGGTCCACAAGGTCTTTTAGAGGTCAGTGCTTCATATGCTGTATTTAACTGTCACATAGGCAAAAGAAGAACCCAATGAGTCGGTAACTTCATTGCAAAACTGGTGAAGAAGCCTTTGCAAGATCTTGTAACAAAGAAGGTTATTGGGAAAGGACATGAATCTAGAGGACTTTACATTTTTGAAGACCAAGTATCGACATCAACAATTGTTGTTTGTTCTGGAGTTGTTTCTCCTTTTAATGCCCCATTATCGTTTGTTCATCCATCTCTCTCGGTCTTAAGAAAACTTTGTCCTCAATTTCATAACTTATCTTTGTTGAATTGTGACTCATGTCAGTTTGCCAAATTTTATCGTCTTAGCTCCAATCCTAGAGTTCATAAACGGGCAAATTCCCTTTTCGAGGTAGTTCATTTTGATATTTGGATCCATGTTTAGTTGAGTTCAAAACTGGATTTTGATATTTTGTTACCTTTGTTGATGATCACTCTCACATGACTTTGCGTATTTTTATAAAAATTGTTCTAAGTTACTTTCTCATTTCTGCAATTTCCATGCTAAAATCGAACTCAGTTTAGTGTGTTCAAAAACCTTGAGAACTGACAATGTCAGTGAGTTTTTTCATAAGCTCTTATGTCGTACCTTTGTATACATGGAATCATTCACCAATCATCTTGGGCTGATACTCCATCCCAAAATGGGGTTGCAGAATGAAAGAATACAAATCTGCTTGAAACTGCACGGGCACTATCCTTTCAAATGCATGTTCCAAACCATTTTTGGGTTGATACAATTTCAACTTGTTTTCTTATAAATCGAATGCCTTCATCTGCTCTTCAAGGAAAGAAGACTATTGGGTGCAAATGGGTGTTTGCAGGTAAGGTTAATCTCGATGGATCAATAGCTCGTTTAAAAGCACGCCTTGTGGCTAAAGGTTATGCTCAAATGTATGAGATTGACTATATTGATACATTCTCTCCTATTACTAAGCTCATTTGTGTTAGGTTATTCATTTCTCTGGCAGTATCTCACATCAGCTTGACATTAAAAATGTCTTTCACTACGTGATCTTCAACAGGAAGTCTATATGGAGAAACCACTTGGGTTTATTGCTCAAAGGGAGAATGATAAAGTGTGTCGTCTTGACAAATCCTTGTACAAGTTGAAGCAAAGTCCACATGCATGGTTTGGAAAATTTAGTCAAACACTTAGCAGTTTGGAATAAAGAAAAGCAAATTGAATCACTTAGTTTTCTATTGAAGATCTATGCATGGAATTATTCTACCTGTTGTACATGTTGAGGATATCTTTATAACCAACAATGATACATCAGAGAAAATATGTGCTTGATTGACTGTCGGAGATAGGAAAATTGGGAACCAAGCCATGCAGTACTCTGATGATGCCTAGTCTACTTTTAAAAGATGGAGAACCATTTAAGGATCCTGAGAGATAGAGACTGGTTGGGAAGTTGAATTACCCTATCGTAACACATCCAAACATAGCTTATTTGGTAAGTGCTGTAAGCCAGTTTATGACCTTACCCAGAGTTAAACATTGGGATGCAACACAACAGATTCTATGTTACCTTAAGGCTGCACCTGGACATGTGATCTTACATAAAGATCATGATCATATGAACATTGAATGTTTTTCAGATGCTGATTGGGCACGATGAAAAAAAGACAAAAGATCAACTTCTGAGTATAGTGTTTCTGTTGGAGACAATTTGGTTTCATGGAAGAGTAAGAAACAAAATGTAGCTTCCATCAAGTGCTGAGTTAGAATATAGAGCAATGGGATAATCAATGTGTGAAATAATATTGTTACATCAACTCTTGATTGAGTTGGGCTTTAACACAACAATTTTGACTAAGTTGTGGCGTGACAATCAAGCTGCTCTCCATATCGCATAGCATCTAACCCAAAATTTCATGAGCGTACTAAACAAATTGAGATTCGTTATCATTTTGTTGGGGAAAAAGTACAACAAAGCTTGGGGTCTATTGAATATGTGAAGACTGGAAAACAAATAGGAGATATCTTTACAAAAGTTTTGAATGGAGCTCGAATAGACGACCCATGTAACAAGTTGGGCATGATTATATGCTTTCGTTTGAGGGGCAGTGTTATGGTATACATAATTATACAAGCTTATTAGTTTTTTGCTTTTAATGTAATTTACTGATCTTTATTCAGGGTTTCCATGTATGCCTATATATATTGAATTCTATTGTATAGAATGCATC

Coding sequence (CDS)

ATGCATGTTCCAAACCATTTTTGGGTTGATACAATTTCAACTTGTTTTCTTATAAATCGAATGCCTTCATCTGCTCTTCAAGGAAAGAAGACTATTGGGTGCAAATGGGTGTTTGCAGGTAAGGTTAATCTCGATGGATCAATAGCTCGTTTAAAAGCACGCCTTGTGGCTAAAGGTTATGCTCAAATGTATGAGATTGACTATATTGATACATTCTCTCCTATTACTAAGCTCATTTGTGTTAGGTTATTCATTTCTCTGGCAGTATCTCACATCAGCTTGACATTAAAAATGTCTTTCACTACGTGA

Protein sequence

MHVPNHFWVDTISTCFLINRMPSSALQGKKTIGCKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVRLFISLAVSHISLTLKMSFTT
Homology
[Close]
BLAST of Cmc10g0277091 vs. NCBI nr
Match: TYJ97231.1 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa])

HSP 1 Score: 113.6 bits (283), Expect = 9.9e-22
Identity = 62/118 (52.54%), Postives = 73/118 (61.86%), Query Frame = 0 

Query: 1   MHVPNHFWVDTIST-CFLINRMPSSAL--------------------------QGKKTIG 60
           MHV   FW D +ST CFLINRMPSS L                          +G+K IG
Sbjct: 234 MHVLKTFWADAVSTACFLINRMPSSLLNDSYPTLMPPSSCDPRPSDDLPIALRKGEKAIG 293

Query: 61  CKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVRLFISLAVSH 92
           CKWVF+ KVN D ++ARLKARLVAKGYAQ Y IDY DTFSP+ KL  + LF+S+A +H
Sbjct: 294 CKWVFSVKVNPDRTVARLKARLVAKGYAQTYGIDYSDTFSPVAKLTFICLFLSIAGTH 351

[Close]
BLAST of Cmc10g0277091 vs. NCBI nr
Match: TYK25818.1 (putative Polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 113.2 bits (282), Expect = 1.3e-21
Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0 

Query: 29  KKTIGCKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVRL 84
           KKTIGCKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVR+
Sbjct: 173 KKTIGCKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVRV 227

[Close]
BLAST of Cmc10g0277091 vs. NCBI nr
Match: RVW99416.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 103.6 bits (257), Expect = 1.0e-18
Identity = 49/64 (76.56%), Postives = 55/64 (85.94%), Query Frame = 0 

Query: 27  QGKKTIGCKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVRLFIS 86
           QGKK +GCKWVFA KVNLDGS+ARLKARLVA+GYAQ Y +DY DTFSP+ KL  VRLFIS
Sbjct: 847 QGKKVVGCKWVFAVKVNLDGSVARLKARLVARGYAQTYGVDYSDTFSPVAKLNSVRLFIS 906

Query: 87  LAVS 91
           +A S
Sbjct: 907 IAAS 910

[Close]
BLAST of Cmc10g0277091 vs. NCBI nr
Match: RVW86452.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 102.1 bits (253), Expect = 3.0e-18
Identity = 49/64 (76.56%), Postives = 54/64 (84.38%), Query Frame = 0 

Query: 27  QGKKTIGCKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVRLFIS 86
           QGKK +GCKWVFA KVN DGS+ARLKARLVAKGYAQ Y +DY DTFSP+ KL  VRLFIS
Sbjct: 878 QGKKVVGCKWVFAVKVNPDGSVARLKARLVAKGYAQTYGVDYSDTFSPVAKLNSVRLFIS 937

Query: 87  LAVS 91
           +A S
Sbjct: 938 IAAS 941

[Close]
BLAST of Cmc10g0277091 vs. NCBI nr
Match: RVW69276.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 100.9 bits (250), Expect = 6.7e-18
Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 0 

Query: 27  QGKKTIGCKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVRLFIS 86
           QGKK +GCKWVFA KVN DGS+ARLKARLVA+GYAQ Y +DY DTFSP+ KL  VRLFIS
Sbjct: 826 QGKKVVGCKWVFAVKVNPDGSVARLKARLVARGYAQTYGVDYSDTFSPVAKLNSVRLFIS 885

Query: 87  LAVS 91
           +A S
Sbjct: 886 IAAS 889

[Close]
BLAST of Cmc10g0277091 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.8e-11
Identity = 30/58 (51.72%), Postives = 41/58 (70.69%), Query Frame = 0 

Query: 32   IGCKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVRLFISLAV 90
            +GC+W+F  K N DGS+ R KARLVAKGY Q   +DY +TFSP+ K   +R+ + +AV
Sbjct: 998  VGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAV 1055

[Close]
BLAST of Cmc10g0277091 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.8e-11
Identity = 30/58 (51.72%), Postives = 41/58 (70.69%), Query Frame = 0 

Query: 32   IGCKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVRLFISLAV 90
            +GC+W+F  K N DGS+ R KARLVAKGY Q   +DY +TFSP+ K   +R+ + +AV
Sbjct: 981  VGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAV 1038

[Close]
BLAST of Cmc10g0277091 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 5.9e-09
Identity = 26/57 (45.61%), Postives = 42/57 (73.68%), Query Frame = 0 

Query: 32  IGCKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVRLFISLA 89
           +GCKWVF  K++ DG++ RLKARLVAKG+ Q   I +++T+SP+ +   +R  +++A
Sbjct: 69  LGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]
BLAST of Cmc10g0277091 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 61.2 bits (147), Expect = 7.7e-09
Identity = 29/80 (36.25%), Postives = 48/80 (60.00%), Query Frame = 0 

Query: 12  ISTCFLINRMPSSALQGKKTIGCKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDT 71
           I+  + I + P    + K  +  +WVF+ K N  G+  R KARLVA+G+ Q Y+IDY +T
Sbjct: 919 INNTWTITKRP----ENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEET 978

Query: 72  FSPITKLICVRLFISLAVSH 92
           F+P+ ++   R  +SL + +
Sbjct: 979 FAPVARISSFRFILSLVIQY 994

[Close]
BLAST of Cmc10g0277091 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 7.7e-09
Identity = 29/64 (45.31%), Postives = 41/64 (64.06%), Query Frame = 0 

Query: 27  QGKKTIGCKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVRLFIS 86
           +GK+ + CKWVF  K + D  + R KARLV KG+ Q   ID+ + FSP+ K+  +R  +S
Sbjct: 850 KGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILS 909

Query: 87  LAVS 91
           LA S
Sbjct: 910 LAAS 913

[Close]
BLAST of Cmc10g0277091 vs. ExPASy TrEMBL
Match: A0A5D3BF36 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00210 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.8e-22
Identity = 62/118 (52.54%), Postives = 73/118 (61.86%), Query Frame = 0 

Query: 1   MHVPNHFWVDTIST-CFLINRMPSSAL--------------------------QGKKTIG 60
           MHV   FW D +ST CFLINRMPSS L                          +G+K IG
Sbjct: 234 MHVLKTFWADAVSTACFLINRMPSSLLNDSYPTLMPPSSCDPRPSDDLPIALRKGEKAIG 293

Query: 61  CKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVRLFISLAVSH 92
           CKWVF+ KVN D ++ARLKARLVAKGYAQ Y IDY DTFSP+ KL  + LF+S+A +H
Sbjct: 294 CKWVFSVKVNPDRTVARLKARLVAKGYAQTYGIDYSDTFSPVAKLTFICLFLSIAGTH 351

[Close]
BLAST of Cmc10g0277091 vs. ExPASy TrEMBL
Match: A0A5D3DQJ6 (Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00230 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 6.3e-22
Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0 

Query: 29  KKTIGCKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVRL 84
           KKTIGCKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVR+
Sbjct: 173 KKTIGCKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVRV 227

[Close]
BLAST of Cmc10g0277091 vs. ExPASy TrEMBL
Match: A0A438IRR9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1320 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 5.0e-19
Identity = 49/64 (76.56%), Postives = 55/64 (85.94%), Query Frame = 0 

Query: 27  QGKKTIGCKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVRLFIS 86
           QGKK +GCKWVFA KVNLDGS+ARLKARLVA+GYAQ Y +DY DTFSP+ KL  VRLFIS
Sbjct: 847 QGKKVVGCKWVFAVKVNLDGSVARLKARLVARGYAQTYGVDYSDTFSPVAKLNSVRLFIS 906

Query: 87  LAVS 91
           +A S
Sbjct: 907 IAAS 910

[Close]
BLAST of Cmc10g0277091 vs. ExPASy TrEMBL
Match: A0A438HPS2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2969 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.4e-18
Identity = 49/64 (76.56%), Postives = 54/64 (84.38%), Query Frame = 0 

Query: 27  QGKKTIGCKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVRLFIS 86
           QGKK +GCKWVFA KVN DGS+ARLKARLVAKGYAQ Y +DY DTFSP+ KL  VRLFIS
Sbjct: 878 QGKKVVGCKWVFAVKVNPDGSVARLKARLVAKGYAQTYGVDYSDTFSPVAKLNSVRLFIS 937

Query: 87  LAVS 91
           +A S
Sbjct: 938 IAAS 941

[Close]
BLAST of Cmc10g0277091 vs. ExPASy TrEMBL
Match: A5AWD0 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_019194 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 3.2e-18
Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 0 

Query: 27  QGKKTIGCKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVRLFIS 86
           QGKK +GCKWVFA KVN DGS+ARLKARLVA+GYAQ Y +DY DTFSP+ KL  VRLFIS
Sbjct: 868 QGKKVVGCKWVFAVKVNPDGSVARLKARLVARGYAQTYGVDYSDTFSPVAKLNSVRLFIS 927

Query: 87  LAVS 91
           +A S
Sbjct: 928 IAAS 931

[Close]
BLAST of Cmc10g0277091 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 75.5 bits (184), Expect = 2.8e-14
Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 0 

Query: 29  KKTIGCKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVRLFISLA 88
           KK IGCKWV+  K N DG+I R KARLVAKGY Q   ID+I+TFSP+ KL  V+L ++++
Sbjct: 124 KKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAIS 183

[Close]
BLAST of Cmc10g0277091 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 61.6 bits (148), Expect = 4.2e-10
Identity = 26/57 (45.61%), Postives = 42/57 (73.68%), Query Frame = 0 

Query: 32  IGCKWVFAGKVNLDGSIARLKARLVAKGYAQMYEIDYIDTFSPITKLICVRLFISLA 89
           +GCKWVF  K++ DG++ RLKARLVAKG+ Q   I +++T+SP+ +   +R  +++A
Sbjct: 69  LGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

The following BLAST results are available for this feature:
BLAST of Cmc10g0277091 vs. NCBI nr
Match NameE-valueIdentityDescription
TYJ97231.19.9e-2252.54Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa][more]
TYK25818.11.3e-2198.18putative Polyprotein [Cucumis melo var. makuwa][more]
RVW99416.11.0e-1876.56Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
RVW86452.13.0e-1876.56Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
RVW69276.16.7e-1875.00Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
BLAST of Cmc10g0277091 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94HW24.8e-1151.72Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT944.8e-1151.72Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P925205.9e-0945.61Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ... [more]
P041467.7e-0936.25Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P109787.7e-0945.31Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
BLAST of Cmc10g0277091 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BF364.8e-2252.54Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa O... [more]
A0A5D3DQJ66.3e-2298.18Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436... [more]
A0A438IRR95.0e-1976.56Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A0A438HPS21.4e-1876.56Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A5AWD03.2e-1875.00Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_019194 PE=4 SV=1[more]
BLAST of Cmc10g0277091 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23160.12.8e-1458.33cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00820.14.2e-1045.61Reverse transcriptase (RNA-dependent DNA polymerase) [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 27..92
e-value: 5.8E-15
score: 55.5

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0277091.1Cmc10g0277091.1mRNA