Cmc10g0276641 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0276641
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr10: 11876838 .. 11877239 (+)
RNA-Seq Expression	Cmc10g0276641
Synteny	Cmc10g0276641

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTCTAGATATAAAATGCAGAATTTCAAAAAGGGTCTGCTGCCATACAGATATGGAATTCATTTGTTAAATGAACAATGTCCTAAGACACCTCAAGAGGTTGAGGATATGAGAAAAATTCCTTATGCTTCCGCTGTTGAAAGTTTGATGTACACAATGTTATGTACTAGACCTGACATTTGCTTTTCAATAGGGATGGTCAGTAGGTATCAGTCCAATCCTGGACGTGATCACTGGACAGTCGTTAAAAATATTCTAAAATATCTTAGAAGAACAAAAGACTACATGCTTGTATATGGTACTAAGGATCTGATCCTTACAAAATACACTGATTCTGATTTCCAAACGGATAAAGATGCTCGAAAGTCTACATCAGGATCAATATTCACTCTAAATTGA

mRNA sequence

ATGTTGTCTAGATATAAAATGCAGAATTTCAAAAAGGGTCTGCTGCCATACAGATATGGAATTCATTTGTTAAATGAACAATGTCCTAAGACACCTCAAGAGGTTGAGGATATGAGAAAAATTCCTTATGCTTCCGCTGTTGAAAGTTTGATGTACACAATGTTATGTACTAGACCTGACATTTGCTTTTCAATAGGGATGGTCAGTAGGTATCAGTCCAATCCTGGACGTGATCACTGGACAGTCGTTAAAAATATTCTAAAATATCTTAGAAGAACAAAAGACTACATGCTTGTATATGGTACTAAGGATCTGATCCTTACAAAATACACTGATTCTGATTTCCAAACGGATAAAGATGCTCGAAAGTCTACATCAGGATCAATATTCACTCTAAATTGA

Coding sequence (CDS)

ATGTTGTCTAGATATAAAATGCAGAATTTCAAAAAGGGTCTGCTGCCATACAGATATGGAATTCATTTGTTAAATGAACAATGTCCTAAGACACCTCAAGAGGTTGAGGATATGAGAAAAATTCCTTATGCTTCCGCTGTTGAAAGTTTGATGTACACAATGTTATGTACTAGACCTGACATTTGCTTTTCAATAGGGATGGTCAGTAGGTATCAGTCCAATCCTGGACGTGATCACTGGACAGTCGTTAAAAATATTCTAAAATATCTTAGAAGAACAAAAGACTACATGCTTGTATATGGTACTAAGGATCTGATCCTTACAAAATACACTGATTCTGATTTCCAAACGGATAAAGATGCTCGAAAGTCTACATCAGGATCAATATTCACTCTAAATTGA

Protein sequence

MLSRYKMQNFKKGLLPYRYGIHLLNEQCPKTPQEVEDMRKIPYASAVESLMYTMLCTRPDICFSIGMVSRYQSNPGRDHWTVVKNILKYLRRTKDYMLVYGTKDLILTKYTDSDFQTDKDARKSTSGSIFTLN

Homology

[Close]

BLAST of Cmc10g0276641 vs. NCBI nr
Match: TYK21785.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 246.1 bits (627), Expect = 1.7e-61
Identity = 119/133 (89.47%), Postives = 122/133 (91.73%), Query Frame = 0


Query: 1   MLSRYKMQNFKKGLLPYRYGIHLLNEQCPKTPQEVEDMRKIPYASAVESLMYTMLCTRPD 60
           MLS+YKMQN KKGLLPYRY IHL NEQCPKTPQEVEDMRKIPYAS V S MY MLCTRPD
Sbjct: 10  MLSKYKMQNSKKGLLPYRYRIHLSNEQCPKTPQEVEDMRKIPYASVVGSSMYAMLCTRPD 69

Query: 61  ICFSIGMVSRYQSNPGRDHWTVVKNILKYLRRTKDYMLVYGTKDLILTKYTDSDFQTDKD 120
           ICFS+G+VSRYQSNPGRDHWT VKNILKYLRRTKDYMLVYGTK LILT YTDSDFQ DKD
Sbjct: 70  ICFSVGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLVYGTKYLILTGYTDSDFQMDKD 129

Query: 121 ARKSTSGSIFTLN 134
           ARKSTSGSIFTLN
Sbjct: 130 ARKSTSGSIFTLN 142

[Close]

BLAST of Cmc10g0276641 vs. NCBI nr
Match: TYK11050.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 245.7 bits (626), Expect = 2.2e-61
Identity = 117/133 (87.97%), Postives = 123/133 (92.48%), Query Frame = 0


Query: 1   MLSRYKMQNFKKGLLPYRYGIHLLNEQCPKTPQEVEDMRKIPYASAVESLMYTMLCTRPD 60
           MLSRYKMQN KKGLLPYRYGIHL  EQCPKTPQEVEDM  IPYASA+ SLMY MLCTR D
Sbjct: 131 MLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAIGSLMYAMLCTRVD 190

Query: 61  ICFSIGMVSRYQSNPGRDHWTVVKNILKYLRRTKDYMLVYGTKDLILTKYTDSDFQTDKD 120
           IC+S+G+V+RYQSNPGRDHWT VKNILKYLRRTKDYMLVYG+KDLILT YTDSDFQTDKD
Sbjct: 191 ICYSVGIVNRYQSNPGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKD 250

Query: 121 ARKSTSGSIFTLN 134
           ARKSTSGSIFTLN
Sbjct: 251 ARKSTSGSIFTLN 263

[Close]

BLAST of Cmc10g0276641 vs. NCBI nr
Match: TYK06159.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 240.4 bits (612), Expect = 9.2e-60
Identity = 115/133 (86.47%), Postives = 122/133 (91.73%), Query Frame = 0


Query: 1   MLSRYKMQNFKKGLLPYRYGIHLLNEQCPKTPQEVEDMRKIPYASAVESLMYTMLCTRPD 60
           MLSRYKMQN KKGLLPYRYGIHL  EQCPKTPQEVEDM  IPYASAV SLM+ MLCTRPD
Sbjct: 596 MLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMHAMLCTRPD 655

Query: 61  ICFSIGMVSRYQSNPGRDHWTVVKNILKYLRRTKDYMLVYGTKDLILTKYTDSDFQTDKD 120
           IC+S+ +VSRYQSNPGRDHWT VKNILKYLRRTKDYMLVYG+KDLILT YTDS+FQTDKD
Sbjct: 656 ICYSVEIVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSNFQTDKD 715

Query: 121 ARKSTSGSIFTLN 134
           ARKSTS S+FTLN
Sbjct: 716 ARKSTSRSVFTLN 728

[Close]

BLAST of Cmc10g0276641 vs. NCBI nr
Match: KAA0025729.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 240.4 bits (612), Expect = 9.2e-60
Identity = 115/133 (86.47%), Postives = 122/133 (91.73%), Query Frame = 0


Query: 1   MLSRYKMQNFKKGLLPYRYGIHLLNEQCPKTPQEVEDMRKIPYASAVESLMYTMLCTRPD 60
           MLSRYKMQN KKGLLPYRYGIHL  EQCPKTPQEVEDM  IPYASAV SLM+ MLCTRPD
Sbjct: 616 MLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMHAMLCTRPD 675

Query: 61  ICFSIGMVSRYQSNPGRDHWTVVKNILKYLRRTKDYMLVYGTKDLILTKYTDSDFQTDKD 120
           IC+S+ +VSRYQSNPGRDHWT VKNILKYLRRTKDYMLVYG+KDLILT YTDS+FQTDKD
Sbjct: 676 ICYSVEIVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSNFQTDKD 735

Query: 121 ARKSTSGSIFTLN 134
           ARKSTS S+FTLN
Sbjct: 736 ARKSTSRSVFTLN 748

[Close]

BLAST of Cmc10g0276641 vs. NCBI nr
Match: KAA0050132.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 240.0 bits (611), Expect = 1.2e-59
Identity = 114/133 (85.71%), Postives = 120/133 (90.23%), Query Frame = 0


Query: 1   MLSRYKMQNFKKGLLPYRYGIHLLNEQCPKTPQEVEDMRKIPYASAVESLMYTMLCTRPD 60
           MLSRYKMQNFKK LL YRYGIHL  EQCPKTPQEVEDM  I YA AV SLMY MLCTRPD
Sbjct: 82  MLSRYKMQNFKKALLSYRYGIHLSKEQCPKTPQEVEDMSNISYAYAVGSLMYAMLCTRPD 141

Query: 61  ICFSIGMVSRYQSNPGRDHWTVVKNILKYLRRTKDYMLVYGTKDLILTKYTDSDFQTDKD 120
           IC+S+G+VSRYQSNPGRDHWT +KNILKYLRRTKDYMLVYG+KDLIL  YTDSDFQTDKD
Sbjct: 142 ICYSVGIVSRYQSNPGRDHWTAIKNILKYLRRTKDYMLVYGSKDLILIGYTDSDFQTDKD 201

Query: 121 ARKSTSGSIFTLN 134
           ARKSTSGS+FTLN
Sbjct: 202 ARKSTSGSVFTLN 214

[Close]

BLAST of Cmc10g0276641 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.1e-28
Identity = 63/133 (47.37%), Postives = 86/133 (64.66%), Query Frame = 0


Query: 1    MLSRYKMQNFKKGLLPYRYGIHLLNEQCPKTPQEVEDMRKIPYASAVESLMYTMLCTRPD 60
            +L R+ M+N K    P    + L  + CP T +E  +M K+PY+SAV SLMY M+CTRPD
Sbjct: 1069 VLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPD 1128

Query: 61   ICFSIGMVSRYQSNPGRDHWTVVKNILKYLRRTKDYMLVYGTKDLILTKYTDSDFQTDKD 120
            I  ++G+VSR+  NPG++HW  VK IL+YLR T    L +G  D IL  YTD+D   D D
Sbjct: 1129 IAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDID 1188

Query: 121  ARKSTSGSIFTLN 134
             RKS++G +FT +
Sbjct: 1189 NRKSSTGYLFTFS 1201

[Close]

BLAST of Cmc10g0276641 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 5.0e-16
Identity = 41/99 (41.41%), Postives = 68/99 (68.69%), Query Frame = 0


Query: 38  MRKIPYASAVESLMYTMLCTRPDICFSIGMVSRYQSNPGRDHWTVVKNILKYLRRTKDYM 97
           M+ +PY SAV ++MY M+ TRPD+  ++G++S++ S+P   HW  +K +L+YL+ T+ Y 
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 98  LVY---GTKDLILTKYTDSDFQTDKDARKSTSGSIFTLN 134
           L +   GT  L+   Y+D+D+  D ++R+STSG +F LN
Sbjct: 61  LEFTRAGTAKLV--GYSDADWAGDVESRRSTSGYLFKLN 97

[Close]

BLAST of Cmc10g0276641 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 69.7 bits (169), Expect = 2.8e-11
Identity = 47/138 (34.06%), Postives = 72/138 (52.17%), Query Frame = 0


Query: 1    MLSRYKMQNFK--KGLLPYRYGIHLLNEQCPKTPQEVEDMRKIPYASAVESLMYTMLCTR 60
            +LS++ M+N       LP +    LLN          ED    P  S +  LMY MLCTR
Sbjct: 1146 ILSKFNMENCNAVSTPLPSKINYELLNSD--------EDC-NTPCRSLIGCLMYIMLCTR 1205

Query: 61   PDICFSIGMVSRYQSNPGRDHWTVVKNILKYLRRTKDYMLVYGTKDLI----LTKYTDSD 120
            PD+  ++ ++SRY S    + W  +K +L+YL+ T D  L++  K+L     +  Y DSD
Sbjct: 1206 PDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIF-KKNLAFENKIIGYVDSD 1265

Query: 121  FQTDKDARKSTSGSIFTL 133
            +   +  RKST+G +F +
Sbjct: 1266 WAGSEIDRKSTTGYLFKM 1273

[Close]

BLAST of Cmc10g0276641 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.9e-08
Identity = 42/133 (31.58%), Postives = 61/133 (45.86%), Query Frame = 0


Query: 1    MLSRYKMQNFKKGLLPYRYGIHLLNEQCPKTPQEVEDMRKIPYASAVESLMYTMLCTRPD 60
            +L+R  M   K    P      L      K P   E      Y   V SL Y +  TRPD
Sbjct: 1192 LLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE------YRGIVGSLQY-LAFTRPD 1251

Query: 61   ICFSIGMVSRYQSNPGRDHWTVVKNILKYLRRTKDY-MLVYGTKDLILTKYTDSDFQTDK 120
            + +++  +S+Y   P  DHW  +K +L+YL  T D+ + +     L L  Y+D+D+  D 
Sbjct: 1252 LSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDT 1311

Query: 121  DARKSTSGSIFTL 133
            D   ST+G I  L
Sbjct: 1312 DDYVSTNGYIVYL 1317

[Close]

BLAST of Cmc10g0276641 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.6e-06
Identity = 32/91 (35.16%), Postives = 50/91 (54.95%), Query Frame = 0


Query: 43   YASAVESLMYTMLCTRPDICFSIGMVSRYQSNPGRDHWTVVKNILKYLRRTKDY-MLVYG 102
            Y   V SL Y +  TRPDI +++  +S++   P  +H   +K IL+YL  T ++ + +  
Sbjct: 1245 YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKK 1304

Query: 103  TKDLILTKYTDSDFQTDKDARKSTSGSIFTL 133
               L L  Y+D+D+  DKD   ST+G I  L
Sbjct: 1305 GNTLSLHAYSDADWAGDKDDYVSTNGYIVYL 1334

[Close]

BLAST of Cmc10g0276641 vs. ExPASy TrEMBL
Match: A0A5D3DE27 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1721G00410 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 8.1e-62
Identity = 119/133 (89.47%), Postives = 122/133 (91.73%), Query Frame = 0


Query: 1   MLSRYKMQNFKKGLLPYRYGIHLLNEQCPKTPQEVEDMRKIPYASAVESLMYTMLCTRPD 60
           MLS+YKMQN KKGLLPYRY IHL NEQCPKTPQEVEDMRKIPYAS V S MY MLCTRPD
Sbjct: 10  MLSKYKMQNSKKGLLPYRYRIHLSNEQCPKTPQEVEDMRKIPYASVVGSSMYAMLCTRPD 69

Query: 61  ICFSIGMVSRYQSNPGRDHWTVVKNILKYLRRTKDYMLVYGTKDLILTKYTDSDFQTDKD 120
           ICFS+G+VSRYQSNPGRDHWT VKNILKYLRRTKDYMLVYGTK LILT YTDSDFQ DKD
Sbjct: 70  ICFSVGIVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLVYGTKYLILTGYTDSDFQMDKD 129

Query: 121 ARKSTSGSIFTLN 134
           ARKSTSGSIFTLN
Sbjct: 130 ARKSTSGSIFTLN 142

[Close]

BLAST of Cmc10g0276641 vs. ExPASy TrEMBL
Match: A0A5D3CI71 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00330 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.1e-61
Identity = 117/133 (87.97%), Postives = 123/133 (92.48%), Query Frame = 0


Query: 1   MLSRYKMQNFKKGLLPYRYGIHLLNEQCPKTPQEVEDMRKIPYASAVESLMYTMLCTRPD 60
           MLSRYKMQN KKGLLPYRYGIHL  EQCPKTPQEVEDM  IPYASA+ SLMY MLCTR D
Sbjct: 131 MLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAIGSLMYAMLCTRVD 190

Query: 61  ICFSIGMVSRYQSNPGRDHWTVVKNILKYLRRTKDYMLVYGTKDLILTKYTDSDFQTDKD 120
           IC+S+G+V+RYQSNPGRDHWT VKNILKYLRRTKDYMLVYG+KDLILT YTDSDFQTDKD
Sbjct: 191 ICYSVGIVNRYQSNPGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKD 250

Query: 121 ARKSTSGSIFTLN 134
           ARKSTSGSIFTLN
Sbjct: 251 ARKSTSGSIFTLN 263

[Close]

BLAST of Cmc10g0276641 vs. ExPASy TrEMBL
Match: A0A5A7SKC9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold653G00100 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.4e-60
Identity = 115/133 (86.47%), Postives = 122/133 (91.73%), Query Frame = 0


Query: 1   MLSRYKMQNFKKGLLPYRYGIHLLNEQCPKTPQEVEDMRKIPYASAVESLMYTMLCTRPD 60
           MLSRYKMQN KKGLLPYRYGIHL  EQCPKTPQEVEDM  IPYASAV SLM+ MLCTRPD
Sbjct: 616 MLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMHAMLCTRPD 675

Query: 61  ICFSIGMVSRYQSNPGRDHWTVVKNILKYLRRTKDYMLVYGTKDLILTKYTDSDFQTDKD 120
           IC+S+ +VSRYQSNPGRDHWT VKNILKYLRRTKDYMLVYG+KDLILT YTDS+FQTDKD
Sbjct: 676 ICYSVEIVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSNFQTDKD 735

Query: 121 ARKSTSGSIFTLN 134
           ARKSTS S+FTLN
Sbjct: 736 ARKSTSRSVFTLN 748

[Close]

BLAST of Cmc10g0276641 vs. ExPASy TrEMBL
Match: A0A5D3C701 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00080 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.4e-60
Identity = 115/133 (86.47%), Postives = 122/133 (91.73%), Query Frame = 0


Query: 1   MLSRYKMQNFKKGLLPYRYGIHLLNEQCPKTPQEVEDMRKIPYASAVESLMYTMLCTRPD 60
           MLSRYKMQN KKGLLPYRYGIHL  EQCPKTPQEVEDM  IPYASAV SLM+ MLCTRPD
Sbjct: 596 MLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMHAMLCTRPD 655

Query: 61  ICFSIGMVSRYQSNPGRDHWTVVKNILKYLRRTKDYMLVYGTKDLILTKYTDSDFQTDKD 120
           IC+S+ +VSRYQSNPGRDHWT VKNILKYLRRTKDYMLVYG+KDLILT YTDS+FQTDKD
Sbjct: 656 ICYSVEIVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGYTDSNFQTDKD 715

Query: 121 ARKSTSGSIFTLN 134
           ARKSTS S+FTLN
Sbjct: 716 ARKSTSRSVFTLN 728

[Close]

BLAST of Cmc10g0276641 vs. ExPASy TrEMBL
Match: A0A5A7U2R8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001560 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 5.8e-60
Identity = 114/133 (85.71%), Postives = 120/133 (90.23%), Query Frame = 0


Query: 1   MLSRYKMQNFKKGLLPYRYGIHLLNEQCPKTPQEVEDMRKIPYASAVESLMYTMLCTRPD 60
           MLSRYKMQNFKK LL YRYGIHL  EQCPKTPQEVEDM  I YA AV SLMY MLCTRPD
Sbjct: 82  MLSRYKMQNFKKALLSYRYGIHLSKEQCPKTPQEVEDMSNISYAYAVGSLMYAMLCTRPD 141

Query: 61  ICFSIGMVSRYQSNPGRDHWTVVKNILKYLRRTKDYMLVYGTKDLILTKYTDSDFQTDKD 120
           IC+S+G+VSRYQSNPGRDHWT +KNILKYLRRTKDYMLVYG+KDLIL  YTDSDFQTDKD
Sbjct: 142 ICYSVGIVSRYQSNPGRDHWTAIKNILKYLRRTKDYMLVYGSKDLILIGYTDSDFQTDKD 201

Query: 121 ARKSTSGSIFTLN 134
           ARKSTSGS+FTLN
Sbjct: 202 ARKSTSGSVFTLN 214

[Close]

BLAST of Cmc10g0276641 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06
Identity = 29/86 (33.72%), Postives = 48/86 (55.81%), Query Frame = 0


Query: 43  YASAVESLMYTMLCTRPDICFSIGMVSRYQSNPGRDHWTVVKNILKYLRRTKDYMLVYGT 102
           Y   +  LMY  + TR DI F++  +S++   P   H   V  IL Y++ T    L Y +
Sbjct: 378 YRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSS 437

Query: 103 K-DLILTKYTDSDFQTDKDARKSTSG 128
           + ++ L  ++D+ FQ+ KD R+ST+G
Sbjct: 438 QAEMQLQVFSDASFQSCKDTRRSTNG 462

[Close]

BLAST of Cmc10g0276641 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 43.1 bits (100), Expect = 2.0e-04
Identity = 24/72 (33.33%), Postives = 38/72 (52.78%), Query Frame = 0


Query: 57  TRPDICFSIGMVSRYQSNPGRDHWTVVKNILKYLRRTKDYMLVY-GTKDLILTKYTDSDF 116
           TRPD+ F++  +S++ S         V  +L Y++ T    L Y  T DL L  + DSD+
Sbjct: 6   TRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDW 65

Query: 117 QTDKDARKSTSG 128
            +  D R+S +G
Sbjct: 66  ASCPDTRRSVTG 77

The following BLAST results are available for this feature:

BLAST of Cmc10g0276641 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK21785.1	1.7e-61	89.47	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK11050.1	2.2e-61	87.97	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK06159.1	9.2e-60	86.47	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0025729.1	9.2e-60	86.47	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0050132.1	1.2e-59	85.71	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc10g0276641 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.1e-28	47.37	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P0CV72	5.0e-16	41.41	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
P04146	2.8e-11	34.06	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	2.9e-08	31.58	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	4.6e-06	35.16	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]

BLAST of Cmc10g0276641 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DE27	8.1e-62	89.47	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1721G004...	[more]
A0A5D3CI71	1.1e-61	87.97	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00330...	[more]
A0A5A7SKC9	4.4e-60	86.47	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold653G0010...	[more]
A0A5D3C701	4.4e-60	86.47	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G0008...	[more]
A0A5A7U2R8	5.8e-60	85.71	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G0015...	[more]

BLAST of Cmc10g0276641 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.3e-06	33.72	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00240.1	2.0e-04	33.33	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 34..129
None	No IPR available	PANTHER	PTHR11439:SF308	SUBFAMILY NOT NAMED	coord: 34..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0276641.1	Cmc10g0276641.1	mRNA