Cmc10g0276241 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTATTTAATATAGTTTAGAACTTCAGCTTATAGTTTTCAAATGATATACATATATATATATATATATATATTTATTGCTAGGGTTTTCCGGTTCCTGTTTGCTCCACTATTTCAGCCGCCTAGGGTTGAAACAACTCATTCCTCCGATTTCAGGATTACTATCTTCCTCCTCGACCTTCTCCGGTAATACTTTCTCTTCACACCCCTTTTGTTGTTTGTGATTTTTAACTTCCTTTGGATTGAAATGCGAGATCTGTGTGTTTCTACCACTCTTCTTTCTTAACTTTTCGATAGTATTGCATGTTCCTTACTTATGGAGAGGATAATGTGTACTTAGGGATATCAATTTTCGTTCACAGTATTCAATATTCATGACTTACTGAGGTGTGAGGAGTTTTCATTTCATAGACCGACTGATGCTATGATCTCAAGCCGAGTTTGACCCCTGTTTTTCTTTTTATATTCTTTTTCTTATTTTTGTGTCAATATATTAGGTGATCAATGACATCCTAATCTATTATTAGTGAATTGAGTAATAAGAAGTAAAGTCTTGTTTATCCAATTTTTTGGTTTGGATTTATTACTATTTTGTTGGAATGCTTGAATGAATTCTAATGGAGTCCGTAGAAATTTGTTTCAGGCGTGCGCCTTTTCTTCTCACTAAATTTTTCATTAGGAATGGGTGTATTTATTTTCAGGAGAATTTGTCGATTGGCGATAGTTGTCTTGTTCTTTTTCATTTCCTTTATAAATTCTTTATGGAAAAAATGTATTTGCTGCAACCTCTGTCTTATTACCCCTATTTGAATCAATAGAGTTCCTGATCCTTCCTACGATGTGGTTTCTGGGGATTTCTCTCTGGGTTCGTGTGATAGATGGGTGACCGAGGGAACACCCTTTATTGGAAATGCTCCTATTCTTCAGAGTCGGTTTCTCATTTTCTCACCTTTACGCTTTGCTGCTGCTCTCATTGACAGTCGAACCGTTTTGGAATTCGTGATATTGTGTGTATTTTGGGGATGAAAGTTTTCTTTAATAAGACTAGTGACAGTTCATTATTGATTGTGGAGAAATTTATGACCATCTAATTTTAATTTGAACAAGGGAGGATGAAAATGATTGGGCGCATTGCATGTTTTATCCAACTAGTACTCATTTTTTCTTTGTTCTGATATTCTTCAGGAACAATGGCTGTTGAAGTTGATGTGGTTAACCAGGAACTGACCCAGCCTCATCACGATGTGAAGCTGTTCAACCGGTGGACCTTTGACGATGTCCAAGTGAATGACATCTCTCTGGTTGATTACATTGGTGTTGCACCTGCCAAGCATGCCACCTATGTCCCCCACACTGCCGGGAGGTACTCTGTCAAGCGCTTTCGAAAAGCTCAGTGCCCAATTGTTGAGAGGCTCACAAATTCTCTGATGATGCATGGAAGAAACAACGGGAAGAAACTCATGGCTGTCAGGATTATTAAGCATGCAATGGAGATTATTCATCTTCTAACTGATCTCAACCCAATTCAAGTCATTGTTGATGCGGTTGTTAACAGTGGACCACGTGAAGATGCCACTCGAATTGGCTCAGCTGGTGTTGTTAGGCGTCAAGCTGTGGATATATCCCCTTTGCGACGTGTTAATCAGGCAATCTATCTTCTTACAACAGGTGCTCGTGAGGCCGCTTTCAGAAACATCAAAACAATTGCAGAATGCTTGGCGGATGAACTTATTAATGCGGCAAAGGGATCATCTAACAGTTATGCAATCAAGAAAAAGGATGAGATTGAGAGAGTTGCTAAGGCAAATCGTTGAGAGGTTATTGTTATGTGTTACGGCAAGAGTTTTCTTTTATTTTTTCTTGTCTGTTTTACATTCTTAAAATGAACGCCATAGTCTAAATCTACCGGTTTTGAATTTCTTATTTGGACAAATCATATCTACTATCTGACTTAAAAGTTTTGGTATCAGTGTCATTTCATCAGAACAGCCGAATGCATGTGTTTCTTGAAATGGTGTCGCTGTAACTTTATCTTTCTTAAATTTAGTCTTTGTAGTTAATTTTT TTTATTTAATATAGTTTAGAACTTCAGCTTATAGTTTTCAAATGATATACATATATATATATATATATATATTTATTGCTAGGGTTTTCCGGTTCCTGTTTGCTCCACTATTTCAGCCGCCTAGGGTTGAAACAACTCATTCCTCCGATTTCAGGATTACTATCTTCCTCCTCGACCTTCTCCGGAACAATGGCTGTTGAAGTTGATGTGGTTAACCAGGAACTGACCCAGCCTCATCACGATGTGAAGCTGTTCAACCGGTGGACCTTTGACGATGTCCAAGTGAATGACATCTCTCTGGTTGATTACATTGGTGTTGCACCTGCCAAGCATGCCACCTATGTCCCCCACACTGCCGGGAGGTACTCTGTCAAGCGCTTTCGAAAAGCTCAGTGCCCAATTGTTGAGAGGCTCACAAATTCTCTGATGATGCATGGAAGAAACAACGGGAAGAAACTCATGGCTGTCAGGATTATTAAGCATGCAATGGAGATTATTCATCTTCTAACTGATCTCAACCCAATTCAAGTCATTGTTGATGCGGTTGTTAACAGTGGACCACGTGAAGATGCCACTCGAATTGGCTCAGCTGGTGTTGTTAGGCGTCAAGCTGTGGATATATCCCCTTTGCGACGTGTTAATCAGGCAATCTATCTTCTTACAACAGGTGCTCGTGAGGCCGCTTTCAGAAACATCAAAACAATTGCAGAATGCTTGGCGGATGAACTTATTAATGCGGCAAAGGGATCATCTAACAGTTATGCAATCAAGAAAAAGGATGAGATTGAGAGAGTTGCTAAGGCAAATCGTTGAGAGGTTATTGTTATGTGTTACGGCAAGAGTTTTCTTTTATTTTTTCTTGTCTGTTTTACATTCTTAAAATGAACGCCATAGTCTAAATCTACCGGTTTTGAATTTCTTATTTGGACAAATCATATCTACTATCTGACTTAAAAGTTTTGGTATCAGTGTCATTTCATCAGAACAGCCGAATGCATGTGTTTCTTGAAATGGTGTCGCTGTAACTTTATCTTTCTTAAATTTAGTCTTTGTAGTTAATTTTT ATGGCTGTTGAAGTTGATGTGGTTAACCAGGAACTGACCCAGCCTCATCACGATGTGAAGCTGTTCAACCGGTGGACCTTTGACGATGTCCAAGTGAATGACATCTCTCTGGTTGATTACATTGGTGTTGCACCTGCCAAGCATGCCACCTATGTCCCCCACACTGCCGGGAGGTACTCTGTCAAGCGCTTTCGAAAAGCTCAGTGCCCAATTGTTGAGAGGCTCACAAATTCTCTGATGATGCATGGAAGAAACAACGGGAAGAAACTCATGGCTGTCAGGATTATTAAGCATGCAATGGAGATTATTCATCTTCTAACTGATCTCAACCCAATTCAAGTCATTGTTGATGCGGTTGTTAACAGTGGACCACGTGAAGATGCCACTCGAATTGGCTCAGCTGGTGTTGTTAGGCGTCAAGCTGTGGATATATCCCCTTTGCGACGTGTTAATCAGGCAATCTATCTTCTTACAACAGGTGCTCGTGAGGCCGCTTTCAGAAACATCAAAACAATTGCAGAATGCTTGGCGGATGAACTTATTAATGCGGCAAAGGGATCATCTAACAGTTATGCAATCAAGAAAAAGGATGAGATTGAGAGAGTTGCTAAGGCAAATCGTTGA MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR Homology
BLAST of Cmc10g0276241 vs. NCBI nr
Match: XP_038888891.1 (40S ribosomal protein S5-like isoform X2 [Benincasa hispida] >XP_038888892.1 40S ribosomal protein S5-like isoform X2 [Benincasa hispida] >XP_038888893.1 40S ribosomal protein S5-like isoform X2 [Benincasa hispida] >XP_038893011.1 40S ribosomal protein S5-like [Benincasa hispida] >XP_038893013.1 40S ribosomal protein S5-like [Benincasa hispida] >KAA0032160.1 40S ribosomal protein S5-like isoform X1 [Cucumis melo var. makuwa] >TYK14405.1 40S ribosomal protein S5-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 404.1 bits (1037), Expect = 7.5e-109 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Cmc10g0276241 vs. NCBI nr
Match: XP_008456864.1 (PREDICTED: 40S ribosomal protein S5-like [Cucumis melo]) HSP 1 Score: 404.1 bits (1037), Expect = 7.5e-109 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Cmc10g0276241 vs. NCBI nr
Match: XP_038888890.1 (40S ribosomal protein S5-like isoform X1 [Benincasa hispida]) HSP 1 Score: 404.1 bits (1037), Expect = 7.5e-109 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Cmc10g0276241 vs. NCBI nr
Match: XP_008447165.1 (PREDICTED: 40S ribosomal protein S5-like isoform X2 [Cucumis melo] >KAA0040833.1 40S ribosomal protein S5-like isoform X2 [Cucumis melo var. makuwa] >TYK17809.1 40S ribosomal protein S5-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 403.7 bits (1036), Expect = 9.8e-109 Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Cmc10g0276241 vs. NCBI nr
Match: XP_008447164.1 (PREDICTED: 40S ribosomal protein S5-like isoform X1 [Cucumis melo]) HSP 1 Score: 403.7 bits (1036), Expect = 9.8e-109 Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Cmc10g0276241 vs. ExPASy Swiss-Prot
Match: Q9ZUT9 (40S ribosomal protein S5-1 OS=Arabidopsis thaliana OX=3702 GN=RPS5A PE=1 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 1.4e-97 Identity = 183/207 (88.41%), Postives = 197/207 (95.17%), Query Frame = 0
BLAST of Cmc10g0276241 vs. ExPASy Swiss-Prot
Match: O65731 (40S ribosomal protein S5 (Fragment) OS=Cicer arietinum OX=3827 GN=RPS5 PE=2 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 2.3e-97 Identity = 180/190 (94.74%), Postives = 188/190 (98.95%), Query Frame = 0
BLAST of Cmc10g0276241 vs. ExPASy Swiss-Prot
Match: P51427 (40S ribosomal protein S5-2 OS=Arabidopsis thaliana OX=3702 GN=RPS5B PE=1 SV=2) HSP 1 Score: 353.6 bits (906), Expect = 1.5e-96 Identity = 183/207 (88.41%), Postives = 195/207 (94.20%), Query Frame = 0
BLAST of Cmc10g0276241 vs. ExPASy Swiss-Prot
Match: Q5E988 (40S ribosomal protein S5 OS=Bos taurus OX=9913 GN=RPS5 PE=2 SV=3) HSP 1 Score: 309.7 bits (792), Expect = 2.5e-83 Identity = 154/190 (81.05%), Postives = 174/190 (91.58%), Query Frame = 0
BLAST of Cmc10g0276241 vs. ExPASy Swiss-Prot
Match: P46782 (40S ribosomal protein S5 OS=Homo sapiens OX=9606 GN=RPS5 PE=1 SV=4) HSP 1 Score: 309.7 bits (792), Expect = 2.5e-83 Identity = 154/190 (81.05%), Postives = 174/190 (91.58%), Query Frame = 0
BLAST of Cmc10g0276241 vs. ExPASy TrEMBL
Match: A0A5A7SN17 (40S ribosomal protein S5-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G00550 PE=3 SV=1) HSP 1 Score: 404.1 bits (1037), Expect = 3.6e-109 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Cmc10g0276241 vs. ExPASy TrEMBL
Match: A0A1S3C3S7 (40S ribosomal protein S5-like OS=Cucumis melo OX=3656 GN=LOC103496679 PE=3 SV=1) HSP 1 Score: 404.1 bits (1037), Expect = 3.6e-109 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Cmc10g0276241 vs. ExPASy TrEMBL
Match: A0A5D3D3Q1 (40S ribosomal protein S5-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00570 PE=3 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 4.7e-109 Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Cmc10g0276241 vs. ExPASy TrEMBL
Match: A0A1S3BGS8 (40S ribosomal protein S5-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489682 PE=3 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 4.7e-109 Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Cmc10g0276241 vs. ExPASy TrEMBL
Match: A0A1S3BGS9 (40S ribosomal protein S5-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489682 PE=3 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 4.7e-109 Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Cmc10g0276241 vs. TAIR 10
Match: AT2G37270.1 (ribosomal protein 5B ) HSP 1 Score: 357.1 bits (915), Expect = 9.8e-99 Identity = 183/207 (88.41%), Postives = 197/207 (95.17%), Query Frame = 0
BLAST of Cmc10g0276241 vs. TAIR 10
Match: AT2G37270.2 (ribosomal protein 5B ) HSP 1 Score: 357.1 bits (915), Expect = 9.8e-99 Identity = 183/207 (88.41%), Postives = 197/207 (95.17%), Query Frame = 0
BLAST of Cmc10g0276241 vs. TAIR 10
Match: AT3G11940.1 (ribosomal protein 5A ) HSP 1 Score: 353.6 bits (906), Expect = 1.1e-97 Identity = 183/207 (88.41%), Postives = 195/207 (94.20%), Query Frame = 0
BLAST of Cmc10g0276241 vs. TAIR 10
Match: AT3G11940.2 (ribosomal protein 5A ) HSP 1 Score: 353.6 bits (906), Expect = 1.1e-97 Identity = 183/207 (88.41%), Postives = 195/207 (94.20%), Query Frame = 0
BLAST of Cmc10g0276241 vs. TAIR 10
Match: ATCG00900.1 (Ribosomal protein S7p/S5e family protein ) HSP 1 Score: 55.8 bits (133), Expect = 4.6e-08 Identity = 48/136 (35.29%), Postives = 74/136 (54.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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