Cmc10g0275971 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0275971
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Uracil-DNA glycosylase
Location	CMiso1.1chr10: 10483542 .. 10492477 (-)
RNA-Seq Expression	Cmc10g0275971
Synteny	Cmc10g0275971

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCTAGAGATTTTGAAAGTTGAGAAATAATTTTAAGCGAAAATAAAAATTAAACCCATCCACCGTAACAAAGGACATAAGGAGGGAAATCCCATACCATCAATTTCAAACCATCTTGGAGAGATGAAAGCTTTATAGCGGGATTTTACCTTGCTTCCCGCCATTGAACCACACTCCTCTCCGCAGCTACCAACAACACCTACAATGGCTTCTTCCTCCGCTTCACTGTCATCCAAAACCAGAACTTTAATCGATATCTTCCAGCCAGCGCTTTCCAAACGCTTAAAAACTTCACAGACATTGAAAACCCTAGCAACCAACGACGACAAATGCGATTCAGACCTCACATTGGCTTCCTCTTCCACTGACATGTCTGCCTCCCAGATATCCCGCATGGAAACCAACAAATGGATGGCCAGATCGAAGCGCAATCTCAAAATTTGCTCAGATAGGGTTTCCAAATGGGAGAATGGATGTATGAAGTTGGAGGAGCTTTTGGTGGAGGAGACATGGTTCGAAGCTCTTCCTGGAGAGTTCGAGAAGCCCTATGCTCTTAATCTTTGCAAATTTGTACAGACTGAGATTTGCAGTAGTGGTGTCCCTATTTATCCTCCTCCTTCTTTGATCTTTAATGCTCTGAATTCTACCCCTTTCGATAGGGTCAAAGTTGTTATTCTTGGTCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCATTTTCTGTTCCTGAGGGTGTTAAAATCCCATCTAGTCTTCTCAACATATTCAAGGAACTGAAGGATGATCTTGGTTGTTCCATCCCATCCCATGGAAATCTCGGGAAATGGGCTGTTCAGGTGCTGTTGTCTTTCATTTATTTGTTCTGTAGACTTAGATATGCTTACTTAAATGTATCTACTTCTGTAATATATCGGTATTGTGAATTTTCTGGTGTTGCATAAATGCTATCTACCGCTGGTTAAAGTATATGTCATGGAGGTTTTGCTTATTTATCATTAGATCAAAGTTATGTGAAAATAGGTTTGGAACTCAGATGAACTGTACAATCCATGGTCCTCAATTCGCCTTTTTGGGGAGGAAGCCCGGTTTTTTTATAGCTTGCTGGGTTTGTGCAGTCTTGTGGGTCTTATGGGGTGAGTGGAACATGTTTAGGGGAGTGGAGAGGGGATCCCAAGGAGTTATGGTCCCTTATTTGCTTTCATGTTTCTCTTCAGACTTCGATTTTGAAGATTTTTTTATAACTGTTCTGTAGGTGTGATATCATATAATTGGAGTCCCTTCTTGTAAGGGAGTTTTTCTTTCTTGTGGGCTTGTCTTTTTGTTTGCCCATGCATTCTTTAATTTTTTTTCTCATTGAAAGTTGTTGATTTTATATATAAAAAAATGGATTATACAATGGATATGGTTCCCATCACAAGGTTGTGATTTTGGTGATTGCTTAGGGAATGAGGAAGTACTTTCGGCATTGAATGCTGATGGAACACCAACTTTTGGTATTAATTTCCTCTTCTATATTGATTCTGATAAGGGTACAATTTGGAATTGAGTGGAACTCAATCCCTTTCTCTCTCTACTGCCTTTCTCTCTCTCAAGAAATTACAGTAAATCTTCTTACTAAATTCTCTTTTTCTTCCTCCTAAATTCTACTAGTATTTATACTTATTTTGCCAGCCTCTAACTAACTCACACGTGAGGGATATGAAATGTGTTATTACAACAAATATAACAAACTTATGTAACAAACTAATGTAACAAACTAATGTAACAAACTCTAACTTTTCCTTCTGTAAACAAATCTAATTGGGGGTCTATCATTACTCCCCCCTTTTAGATTCATCTTGTCCTTAAGGTGAAGAGTAGGGTACAAACGATGCATTTCCTCATATGACTCCCAAGTTGCCTCATGTAATGGCAATCCTTCCCATTTGGTTAGAACTTCTCATTGTTCAGCCTTGTTTTGCCGATACTCCAGGACTTCTTCAGGGATCGATTTCCATTCAAACTTCTCATTAATATGCTGAATAGTGGGTTGTGCATTTTCATGTGGCCCGATTAATTTCTTGAGCTACGACACATGAAACACTGGATGAATGCTAGTAGTGCGCGGTAACTCAAGTTTATAGGCAACCGATCCAATTTTCTCCAAAATTTTGTAAGGACCAAAAAATTTGGGAGAAAGTTTCTCGTTTCGTTTTCTTCGCTGGGTGAGTTGCCTATAAGGACGAATCTTTAGAAATACATAATCTCCCACACAATATTCTACATGTCTTCTTTTCCGATCCGCATAATTTTTCATCTGTTCTTGTGCTATGCATAAATTGTCTCGCAAAGCACTCAAAACCTCATCCCTTTCCTATAGCATTTCCTCAACTGTCGAGTTTTTTGATTGTGTGCTGCCATAGGATATCAAGGCCGGCGGTTTCCTGTCGGAAACAACCTGAAAAGGGGACATCTCAATGGCTCGTTGAAACGTGGTGTTGTACCAGTACTCGGTCCAAGGAAGCCATTTTACCCACTCCTTTGGTTTTTCATTGCAAAAACATCTGAGATAGGTTTCAACTCCCCTGTTGACTACCTCTGTTTGCCCATCGGTTTGAGGGTGTTTAGTCGTGCTTTTGTTTAGTTTTGTTCCAGATAATCGAAACAGTTCTTGCCAAAAATGACTTAGGAAAACTTTATCCCTATCTGATACGATGGACAAAGGAAACCCGTGCAACCTCACAACTTCTCTTATAAATAATTCAGCCACGACTTTTGCTGTGAAGGGGTGTTTAAGAGGTAGGAAGTGACCGTACTTGCTCAATCTGTCCACCACTACCAAAATTACTTCAAACCCATTAGTCTTCGGTAGTCCTTCCACAAAGTCCATGGATATGTCATTCCAAATGGCTTGTGGAATCTCCAAAGGTACCAATAATCCAGCAGGGGACAAGGCTAATGATTTATTTCTTTGGCATACCAAACATTCCTCACAATGCTTCTTAATATCTGTCTTCATTCCTTCCCAATATAAGTCACTAGATATCCTCTTGTAGGTTCGTAAAAACCTTGAGTGCCCTCCAACAACAGAGTTATGGTAGGTATGTAGAATGCTGGAAATTAATGAGGAAGTTTTACTGACCACCAACCTATCCTTGTACTTCAGAACATCATTTTGGAGTGAGTATTTGTTGTTCTGTCGATCTTCCAACTCTATTAACTTTTGGAATTTGGGGTCCTGATGTACTTCCTTCTTGATCAATTCCAAATCTACTGTCACCAGTACAGACAAGCCTTTTAGTTCTACCTCAGTTGGCATTCGAGAAAGGGCGTCTTCAACTCGATTTTCTTCACCCGGCTTGTATATTACTTCAAAGGAGTACCCCAAAAGTTTTGCTATCCAGTTTTGGTATTGAGGTTGTATAACCCTCTGTTTTAATAAGAATTTCAGCGATTTCTGATCAGTTTTCACCTTGAATTTTCCTCCCAATAAGTAGGGTCTCCAACGTTGAACGGCTAATACAACAGCCATTAATTCCCTTTCGTACACCGGTCGTGCTCTATCTCTTAGGGCTACTGTATGGCTGTAGTATGCAATTGGCCTCTTTGCTTGAATTAGTACTGCTCCAACACCATAGCCTGAAGCATCAGTCTCTATTTCGAAAGGCTGATTAAAGTCTGGTAGTGCTAATACTGGAAGAGATGACATTGCCTTTTTGAGCCGTTCAAATGCATCCTCGGCTTCAGCAGACCATTTATATCCTCCATTTTTTAACAACTGTGTCAATGGTGCTGCAATAGCTCCATAATTTTGTACAAAACGTCGATAATATCCCATGAGTCCCAGAAAACCTCTGATTTCTTTGATGTTTGTGGGCTTTGGCCACTTAGTGATCGACTTAATCTTCTTTGGATCCGCTTCAACCCCTTCTCCGGATATAATATGGCCTAAATACTCCACTTTTTGCTGGGCAAAACTACATTTCCTCTTGTTCGCGTATAGCTCGTGTTCTCTTAGTACAGATAGCACTTTTCTCATATGTTCCACATGATCGACTGTGTTCTTATTGTAGATGAGTATATCATCAAAGAATACTAGCACAAATTTTCTCAAAAAGGGCTTAAGTATTGTATTCATCAATGCTTGAAAGTGGCTGGTGCGTTAGTTAACCCGAAGGGCATGACCAAGAACTCGTAATGACCTTCGTGAGTTCTAAAAGCCGTTTTTTCAATATCCTCCTTCACCATTCTGATTTGGTGATCCCCTGACTTCAAGTCAATTTTGAAAAATACAGCTACTCCACTTAATTCATCAAATAGTTCCTCAACTACTGGAATTGGGAATTTATCTGGAATCGTTGCATTATTCACAGCCCTGTAGTCCATACAAAAGCGCCAACTTCCTTCTTTTTTCTTCACTAATAGGACAGGGCTAGAGAAAGGACTGATGCTGGGCCTTATAACCCCTGATTCCAACATTTCCTTGACTGGTTTCTCCATTTCTTCCTTCTGTTGAAACCCATATCGATAAGGTCTTACGTTTATAGGATCGGTTCCTTGTTTCAAGTGTATTTGATGTTCTATTTTCCTTCTAGGGGGAAAATTTTCTTTGATTAAAAACATTACTTCTGAAGACAGCTAATAAATTATGCTGGTTTCAATTAATTTATTTATTAATTTTTAATATTTAAAAATTTGTTGATAAGTCAAGAATTTGGGTTTTTACTAGGTGACTTCTCTAAGTTGAGATCTCGTATCATACAATTATTAGTTCTTGTTGAAGCATTCTAAGTGAGCTTCGTCATGACATTACTCTTATGAACGTGGACTTGAATGGATTCGTAGGATAAGTTGGTCGATTTGGGAGAATTTTCTGCATGGAAAAATGTACAATCAGTTATTTTTTGAAAAGTTTTTTTGTTGGGATATATTTGAAGTCCTATCTGGTGTTTTTCTTTCAATTTTTGGTATTCTAAAATGATTTTTGTATACATTGTAGGGAGTCTTGTTGCTTAATGCTGTTCTCTCAGGTAATTTCCACCCAGGTTTTGCACGTTTTCTCAGTCTACTTTTACTTTTTAAATCAGTAAACTTATGGGGAAGGTATGATCAAAATCCTTTGTTTTGCTCTTTGTGATTGTTTTTAAACAAGTATTTCACTATGAATAACCCTTGACCATCTTAAAAGCTTTGTAATAGCTACATAACAGTTTAAATTTCCAGCTCCAAAGAATAATAGCGAACTTTAATGCCATCAGCAACATCTAGGACATTGAACCAGAAACTCTTCAAACACCACCAAACTGTGATGATGAGCAACAAGGCTGACATAGGTAGCCATATCTTCAAAGCCTGAAGAGAAATTAGCTACAACTAAAGCAAAATTATTATCTTTCTTAAACTGCAAACCTTTTCCTAGGTGAAAAACAGCAATAGGCACCCAAATGGGTGATCCTTGCCAAAGAATTTTGTAAAGTTTTAACATTTCATTACTGGAATGCAAGTCCGATAAGCAAATAATTGGCATTGATCAGCTGAAGCATAGAACAAGTTATTTTCAAGCTAAGCTTCCCAATAAACTCAAAGAGTTGCAACAATTGGATTTTCAAGAGTCACTAGGATACCCAAAAATCATAATAAATTTTCATATTCGTTCATATTTTTAATGGATTATGTACTTATTTAATGTTATGTATTTTCATTTATTATAGTAGTTGAAAGAGCATAACATTAAATGTTGTGCCTTTTCATACAACATTTTTAATTAGTATAAATAGGGTTGTAGTTTCCACATTTTAGGACAACAACATGACTTGAATTTGAATTAAATTTCTCATAGTGTTATCTTTTAAGCTTTATGCTTTTCTTTGTATTCTTGTGTTAGAATACATGTTTAGGACTTTTAATCTAGTTTGATCAATTAGATCGTGGAGAGTTCGAAATCTTGAAGTTAGGAACAAGTTCTCCTTTCTTCTTGATCTTTGATCAGCCTTTCCAAATAAAAATCTGTTTAGCTTTCTTGGAGTTATTTATCTATTTGTTTAATCGGGGTAATTATTATTACTATTGTGGGAGTTCTCCCAAAATAAGGGGAAATCTCAAACGTGATTGAGGTAGTTCCCTTTATCAAAGCCCTTGGGGAACAAGCTAACAAATGCACCGGTTCTCAAAATAGCCTTAAAGAAACATCAGACCCAAATAAGGCCAAAGTGCCCTGTCCAAGATTGCTATAACCAAACCAAAAAAACTGTAAACAAACTGAAACCTAGACTTTGGATAGACAGTTGGTAAGAATCCACTGCTCGAGAAGAAATACTTTAAAGGGTGGAGTTTCTTGTTCTGTCTCATTTCTATCAAATTTAGGGTTTCGTTAAAGTGGCTTTACGTCCATCAAACTTTAATAAGAGTTCTATATTTTCTATTTTGATGTAAGGATACATGCTTCCTGCATTTAGTTATTGATTAATATTTTGGTTTTACCTGTTTAGTTCGAGAGCATCAAGCAAACTCTCATGCGAAGAGAGGATGGGAACAATTTACTGATGCTGTCATCAAGACAATATCACAAAAGAAGGAAGGGATAGTCTTTCTACTTTGGGGGAACTCCGCCCAAGCGAAATTGAGGTACTTCTGTCGTATGATATTACTTCTAAGTTTCTAACAGTGAGCGAAATTGAGGTACTTCTGTCGTATGATATTAGTTCTAAGTTTCTAACAGGGAGTGCACAACTCTGGAAAGAACCAAAATAATAACAGAATCAAGATTAAAATATAACCTGCAACCTTTGGATTTTTCTTAATGGGAAAAGAAAATGAAAACCGAGGGCTTTCAGTTGAATCTTGAAGTATTCCATAGATAAAATGGGATGATATATTAAATAACTAGTGCAATCCAGTTAGTTCAAGTCTAATTGTTGATGCTTAGATTAACGTGATTGATTAATATTTTGGATCTATTTCATTGTTTGTTAATTTTATCGCATGACTGTGAATAGTCACTTTTTAGGATTGTCAGGAAGCTTTTGAATATTATTTCAAAGTAAACAACAAAATAGCATTTTGGTCTTCAAAACCTACGTGATTGAAGTACTTTGAAGGCTAGGAGGCTCTCTCAAAGACCATTTCCCAAAATTTGTTTACTTCAAAAGAATGTTCATTCTATTTCTAACGACTCAACTTTGACGAGCTTATATTAAGAATTACAATAAATATGCCATAGGTAATATTCCCCTTTCTCAATTACACTTCATATTAATAGTTCACAAATTAAAAGCCTCATGTGAATGTAAAGCGCACGCTCGCACATGAGGGGATGTTTTGTAAATACTTTACTATAGAAGTCATTTGCTACCTATGTTATGCAAGCTTTAATTTTTCGAATATAGGAACTTTTCCTGTGAAGTACTGTTTGGAAAAAAAATTGTTTTGCTGAGTTTTAAAATCAACGTAGTGCAATTTTCATCTACTTTAGCTATCTAACGTTCTATTGTCTTGATAAAACTTACAAGAGCATCAACAAAGAGATTTAATTCCTCTTCTTTGGGGCGCAATAACATCCTACTTCACTTAGAATTTAATGTGTGAAGTGAACAGGTTAATTGATGAGAAAAAGCATCACATTCTCAAAGCAGCGCATCCTTCTGGTTTGTCTGCTAACAGAGGCTTCTTTGGTTGCAGGTTAGTTTCATCGTTTAATTCCACTTTTTGAACCTTCCTTTTCTTAAAATATCAACTAGGATTTACTCTGCCTCTAGCCATTGTATTTTATCATTTCCCTTCAGTATAGTTCTCACAATAACGACATTTTATTGCCAGTGCATGGTTTGGTATTTTGTGTATATCACTTGGTTTTCTGCCTTTTCTCTAAATTAAACTTGTTATACTGGAGCACTTCTTTGCTCAATTTTATAAGTGATTATGGCTGGAGAGTGAATTTGGTATGACTTTTCTAATTGTGAAAAAAAGATTTAGCCTTACCCCAAACAAACATTTTCGAACTTTTTATGTAGTTTTGATTTCATAGTAAAAAGTGATTGAAAAGAGTTCCCAAAATACATAAAAGCACTTTTGGAACATAGTTCTTTATAGATAAAATATCACTTAAAAGTATTTACTCTCGAGAATCATACCAAACTCCCACTTACCTTTTTGGCTCTTCCCTTAAGTTCTGTGGTCCATCTCTCAGAACATAGACAATTTTGTGAGGCTGTTGAAGTTTATAATCGTTAAGAGATTATATGTTTATGTAATTCACTAATATGAAGCTGTTTAGATGGGTGCATTTTCATTTCCCTTGGAATTTTAGTTCGTTTACTGCCAACTTTGGATTTTCGACAGGCATTTTTCTCGAACAAACATACTACTCAAGGAACTAGGTACTGCTTCCATAGATTGGCAACTTTGATCCAAGCATGTGAACCATTGAAGTTCATTTTTTGTGGATACACTTCAAGATCTCCAGTCATGCTCAGACCTGCTTGCTCGATGACTTTTCGTTGAATTTTCACTTGTCGATTCACCGTTGTTTAAGTGTCCAGATGCCCATCCTTTACCTTTTTGTATTGTAGTGTTTATTCCTGCTGTTTGATATTTATCCCAAAGTAGCACCAGTTTATAAAATAGGGTAAAATTAGAAGTTAGTCTATCACACCACCAGTGGTTATCATAAATCAGGCTAGATGTTCCGTTGTACCTAAATTTTGCGATTCTCTCAATCCTATCGTGGGAAGTGGGAAGATTCATCTTAGTCCCTGTGGATGGAAAATATGGGCAAAAGACTAACTGCCCTTCACGTGCTTTCAATAGTAAAGTTGTAATTTTGGAGAAGGAAAGATGACTTATAAAACAAAAAAAAAAAAAAAAAGAAGAAAAACACATGTACGGTGTCAACCATAGAGCTTCTGATGCTTAAGTCAGTCCAGGGAGCAACTTACTTTTTGTGGTTTGATG

mRNA sequence

TTTCCTAGAGATTTTGAAAGTTGAGAAATAATTTTAAGCGAAAATAAAAATTAAACCCATCCACCGTAACAAAGGACATAAGGAGGGAAATCCCATACCATCAATTTCAAACCATCTTGGAGAGATGAAAGCTTTATAGCGGGATTTTACCTTGCTTCCCGCCATTGAACCACACTCCTCTCCGCAGCTACCAACAACACCTACAATGGCTTCTTCCTCCGCTTCACTGTCATCCAAAACCAGAACTTTAATCGATATCTTCCAGCCAGCGCTTTCCAAACGCTTAAAAACTTCACAGACATTGAAAACCCTAGCAACCAACGACGACAAATGCGATTCAGACCTCACATTGGCTTCCTCTTCCACTGACATGTCTGCCTCCCAGATATCCCGCATGGAAACCAACAAATGGATGGCCAGATCGAAGCGCAATCTCAAAATTTGCTCAGATAGGGTTTCCAAATGGGAGAATGGATGTATGAAGTTGGAGGAGCTTTTGGTGGAGGAGACATGGTTCGAAGCTCTTCCTGGAGAGTTCGAGAAGCCCTATGCTCTTAATCTTTGCAAATTTGTACAGACTGAGATTTGCAGTAGTGGTGTCCCTATTTATCCTCCTCCTTCTTTGATCTTTAATGCTCTGAATTCTACCCCTTTCGATAGGGTCAAAGTTGTTATTCTTGGTCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCATTTTCTGTTCCTGAGGGTGTTAAAATCCCATCTAGTCTTCTCAACATATTCAAGGAACTGAAGGATGATCTTGGTTGTTCCATCCCATCCCATGGAAATCTCGGGAAATGGGCTGTTCAGGGAGTCTTGTTGCTTAATGCTGTTCTCTCAGTTCGAGAGCATCAAGCAAACTCTCATGCGAAGAGAGGATGGGAACAATTTACTGATGCTGTCATCAAGACAATATCACAAAAGAAGGAAGGGATAGTCTTTCTACTTTGGGGGAACTCCGCCCAAGCGAAATTGAGGTTAATTGATGAGAAAAAGCATCACATTCTCAAAGCAGCGCATCCTTCTGGTTTGTCTGCTAACAGAGGCTTCTTTGGTTGCAGGCATTTTTCTCGAACAAACATACTACTCAAGGAACTAGGTACTGCTTCCATAGATTGGCAACTTTGATCCAAGCATGTGAACCATTGAAGTTCATTTTTTGTGGATACACTTCAAGATCTCCAGTCATGCTCAGACCTGCTTGCTCGATGACTTTTCGTTGAATTTTCACTTGTCGATTCACCGTTGTTTAAGTGTCCAGATGCCCATCCTTTACCTTTTTGTATTGTAGTGTTTATTCCTGCTGTTTGATATTTATCCCAAAGTAGCACCAGTTTATAAAATAGGGTAAAATTAGAAGTTAGTCTATCACACCACCAGTGGTTATCATAAATCAGGCTAGATGTTCCGTTGTACCTAAATTTTGCGATTCTCTCAATCCTATCGTGGGAAGTGGGAAGATTCATCTTAGTCCCTGTGGATGGAAAATATGGGCAAAAGACTAACTGCCCTTCACGTGCTTTCAATAGTAAAGTTGTAATTTTGGAGAAGGAAAGATGACTTATAAAACAAAAAAAAAAAAAAAAAGAAGAAAAACACATGTACGGTGTCAACCATAGAGCTTCTGATGCTTAAGTCAGTCCAGGGAGCAACTTACTTTTTGTGGTTTGATG

Coding sequence (CDS)

ATGGCTTCTTCCTCCGCTTCACTGTCATCCAAAACCAGAACTTTAATCGATATCTTCCAGCCAGCGCTTTCCAAACGCTTAAAAACTTCACAGACATTGAAAACCCTAGCAACCAACGACGACAAATGCGATTCAGACCTCACATTGGCTTCCTCTTCCACTGACATGTCTGCCTCCCAGATATCCCGCATGGAAACCAACAAATGGATGGCCAGATCGAAGCGCAATCTCAAAATTTGCTCAGATAGGGTTTCCAAATGGGAGAATGGATGTATGAAGTTGGAGGAGCTTTTGGTGGAGGAGACATGGTTCGAAGCTCTTCCTGGAGAGTTCGAGAAGCCCTATGCTCTTAATCTTTGCAAATTTGTACAGACTGAGATTTGCAGTAGTGGTGTCCCTATTTATCCTCCTCCTTCTTTGATCTTTAATGCTCTGAATTCTACCCCTTTCGATAGGGTCAAAGTTGTTATTCTTGGTCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCATTTTCTGTTCCTGAGGGTGTTAAAATCCCATCTAGTCTTCTCAACATATTCAAGGAACTGAAGGATGATCTTGGTTGTTCCATCCCATCCCATGGAAATCTCGGGAAATGGGCTGTTCAGGGAGTCTTGTTGCTTAATGCTGTTCTCTCAGTTCGAGAGCATCAAGCAAACTCTCATGCGAAGAGAGGATGGGAACAATTTACTGATGCTGTCATCAAGACAATATCACAAAAGAAGGAAGGGATAGTCTTTCTACTTTGGGGGAACTCCGCCCAAGCGAAATTGAGGTTAATTGATGAGAAAAAGCATCACATTCTCAAAGCAGCGCATCCTTCTGGTTTGTCTGCTAACAGAGGCTTCTTTGGTTGCAGGCATTTTTCTCGAACAAACATACTACTCAAGGAACTAGGTACTGCTTCCATAGATTGGCAACTTTGA

Protein sequence

MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQANSHAKRGWEQFTDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFSRTNILLKELGTASIDWQL

Homology

[Close]

BLAST of Cmc10g0275971 vs. NCBI nr
Match: XP_008465227.1 (PREDICTED: uracil-DNA glycosylase, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 639.8 bits (1649), Expect = 1.2e-179
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120
           ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQANSHAKRGWEQF 240
           KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQANSHAKRGWEQF
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQANSHAKRGWEQF 240

Query: 241 TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 RTNILLKELGTASIDWQL 319
           RTNILLKELGTASIDWQL
Sbjct: 301 RTNILLKELGTASIDWQL 318

[Close]

BLAST of Cmc10g0275971 vs. NCBI nr
Match: XP_004140430.1 (uracil-DNA glycosylase, mitochondrial [Cucumis sativus] >KGN50850.1 hypothetical protein Csa_004717 [Cucumis sativus])

HSP 1 Score: 626.3 bits (1614), Expect = 1.4e-175
Identity = 308/318 (96.86%), Postives = 316/318 (99.37%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSS D+SASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60

Query: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120
           ISRMETNKW+ARSKRNLK CSDRVSKWENGC+KLEELLVEETWFEALPGEF+KPYALNLC
Sbjct: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQANSHAKRGWEQF 240
           KIPSSLLNIFKEL+DDLGCSIPSHGNLGKWAVQGVLLLNAVLSVR+HQANSHAKRGWEQF
Sbjct: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240

Query: 241 TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVIKTISQKKEGI+FLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 RTNILLKELGTASIDWQL 319
           RTNILLKE+GTASIDWQL
Sbjct: 301 RTNILLKEMGTASIDWQL 318

[Close]

BLAST of Cmc10g0275971 vs. NCBI nr
Match: XP_008465225.1 (PREDICTED: uracil-DNA glycosylase, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 625.9 bits (1613), Expect = 1.9e-175
Identity = 318/343 (92.71%), Postives = 318/343 (92.71%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120
           ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLS----------------- 240
           KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLS                 
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSATSRILNQKLFKHHQTV 240

Query: 241 --------VREHQANSHAKRGWEQFTDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKK 300
                   VREHQANSHAKRGWEQFTDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKK
Sbjct: 241 MKSNKADIVREHQANSHAKRGWEQFTDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKK 300

Query: 301 HHILKAAHPSGLSANRGFFGCRHFSRTNILLKELGTASIDWQL 319
           HHILKAAHPSGLSANRGFFGCRHFSRTNILLKELGTASIDWQL
Sbjct: 301 HHILKAAHPSGLSANRGFFGCRHFSRTNILLKELGTASIDWQL 343

[Close]

BLAST of Cmc10g0275971 vs. NCBI nr
Match: XP_038891400.1 (uracil-DNA glycosylase, mitochondrial [Benincasa hispida])

HSP 1 Score: 610.1 bits (1572), Expect = 1.1e-170
Identity = 302/318 (94.97%), Postives = 311/318 (97.80%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLAT D+KCDS+LTLAS S DMSA+Q
Sbjct: 46  MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATTDEKCDSELTLASFSIDMSAAQ 105

Query: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120
            SRMETNKWMARSKRNLKI SDRVSKWENGCMKLE+LLVEETWFEALPGEFEKPYA+NLC
Sbjct: 106 KSRMETNKWMARSKRNLKIVSDRVSKWENGCMKLEDLLVEETWFEALPGEFEKPYAVNLC 165

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 166 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 225

Query: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQANSHAKRGWEQF 240
           KIPSSLLNIFKELKDDLGCSIPSHGNL KWAVQGVLLLN VLSVR+HQANSHAK+GWEQF
Sbjct: 226 KIPSSLLNIFKELKDDLGCSIPSHGNLEKWAVQGVLLLNTVLSVRKHQANSHAKKGWEQF 285

Query: 241 TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSA+RGFFGCRHFS
Sbjct: 286 TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSASRGFFGCRHFS 345

Query: 301 RTNILLKELGTASIDWQL 319
           RTN+LLKELGTASIDWQL
Sbjct: 346 RTNVLLKELGTASIDWQL 363

[Close]

BLAST of Cmc10g0275971 vs. NCBI nr
Match: XP_022981553.1 (uracil-DNA glycosylase, mitochondrial [Cucurbita maxima])

HSP 1 Score: 595.5 bits (1534), Expect = 2.7e-166
Identity = 291/318 (91.51%), Postives = 308/318 (96.86%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60
           MASSSASL SKTRTLIDIFQPALSKRLKTSQTLKTLAT D+KCDS+LTLASSS D+S+SQ
Sbjct: 1   MASSSASLKSKTRTLIDIFQPALSKRLKTSQTLKTLATTDEKCDSELTLASSSMDISSSQ 60

Query: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120
            SRMETNKW+ARS RNLKI SDRVSKWENGC+KLEELLV+ETWFEALPGEF+KPYALNLC
Sbjct: 61  KSRMETNKWLARSNRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFQKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEICSSGVPIYPPP LIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVETEICSSGVPIYPPPCLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQANSHAKRGWEQF 240
           KIPSSLLNIFKEL++DLGCSIPSHGNL KWAVQGVLLLNAVL+VR+HQANSHAK+GWEQF
Sbjct: 181 KIPSSLLNIFKELREDLGCSIPSHGNLKKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240

Query: 241 TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVI+TISQKKEG+VFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 RTNILLKELGTASIDWQL 319
           RTN+LLKELG  SIDWQL
Sbjct: 301 RTNVLLKELGIGSIDWQL 318

[Close]

BLAST of Cmc10g0275971 vs. ExPASy Swiss-Prot
Match: Q9LIH6 (Uracil-DNA glycosylase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=UNG PE=1 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 2.4e-109
Identity = 208/330 (63.03%), Postives = 246/330 (74.55%), Query Frame = 0


Query: 9   SSKTRTLIDIFQPALSKRLKT---------------SQTLKTLATNDDKCDSDLTLASSS 68
           SS  +TL+D FQPA  KRLK                S+ L ++A +  +     ++A  S
Sbjct: 3   SSTPKTLMDFFQPA--KRLKASPSSSSFPAVSVAGGSRDLGSVANSPPRVTVTTSVADDS 62

Query: 69  TDMSASQISRMETNKWMARSKRNLKICSDRV--SKWENGC-MKLEELLVEETWFEALPGE 128
           + ++  QI+R E NK++A+SKRNL +CS+RV  +K E  C + L ELLVEE+W +ALPGE
Sbjct: 63  SGLTPEQIARAEFNKFVAKSKRNLAVCSERVTKAKSEGNCYVPLSELLVEESWLKALPGE 122

Query: 129 FEKPYALNLCKFVQTEIC--SSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQ 188
           F KPYA +L  F++ EI   S    IYPP  LIFNALN+TPFDRVK VI+GQDPYHGPGQ
Sbjct: 123 FHKPYAKSLSDFLEREIITDSKSPLIYPPQHLIFNALNTTPFDRVKTVIIGQDPYHGPGQ 182

Query: 189 AMGLSFSVPEGVKIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQ 248
           AMGLSFSVPEG K+PSSLLNIFKEL  D+GCSIP HGNL KWAVQGVLLLNAVL+VR  Q
Sbjct: 183 AMGLSFSVPEGEKLPSSLLNIFKELHKDVGCSIPRHGNLQKWAVQGVLLLNAVLTVRSKQ 242

Query: 249 ANSHAKRGWEQFTDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLS 308
            NSHAK+GWEQFTDAVI++ISQ+KEG+VFLLWG  AQ K +LID  KHHIL AAHPSGLS
Sbjct: 243 PNSHAKKGWEQFTDAVIQSISQQKEGVVFLLWGRYAQEKSKLIDATKHHILTAAHPSGLS 302

Query: 309 ANRGFFGCRHFSRTNILLKELGTASIDWQL 319
           ANRGFF CRHFSR N LL+E+G   IDWQL
Sbjct: 303 ANRGFFDCRHFSRANQLLEEMGIPPIDWQL 330

[Close]

BLAST of Cmc10g0275971 vs. ExPASy Swiss-Prot
Match: C1DQR0 (Uracil-DNA glycosylase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) OX=322710 GN=ung PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 5.2e-72
Identity = 132/224 (58.93%), Postives = 162/224 (72.32%), Query Frame = 0


Query: 95  EELLVEETWFEALPGEFEKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVK 154
           + + +E +W EAL  EFEKPY   L  F++ E  ++G  IYPP SLIFNAL+STP D+VK
Sbjct: 6   DRVRLEASWKEALHDEFEKPYMQELSDFLRRE-KAAGKEIYPPGSLIFNALDSTPLDQVK 65

Query: 155 VVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQG 214
           VVI+GQDPYHGPGQA GL FSV  GV +P SL NIFKELK DL   IP HG+L +WA QG
Sbjct: 66  VVIIGQDPYHGPGQAHGLCFSVQPGVPVPPSLQNIFKELKRDLNIDIPKHGHLQRWAEQG 125

Query: 215 VLLLNAVLSVREHQANSHAKRGWEQFTDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEK 274
           VLLLN  L+V    A SHA  GW++FTD VI+ +SQ++E +VF+LWG+ AQ+K RLID  
Sbjct: 126 VLLLNTSLTVERGNAGSHAGMGWQRFTDRVIEVVSQRREHVVFMLWGSHAQSKRRLIDSS 185

Query: 275 KHHILKAAHPSGLSANRGFFGCRHFSRTNILLKELGTASIDWQL 319
           KH +L +AHPS LSA+RGF G  HFSR N  L++ G   IDW L
Sbjct: 186 KHLVLCSAHPSPLSAHRGFIGNGHFSRANQFLEQHGLTPIDWHL 228

[Close]

BLAST of Cmc10g0275971 vs. ExPASy Swiss-Prot
Match: A7I0A8 (Uracil-DNA glycosylase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) OX=360107 GN=ung PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.6e-71
Identity = 138/227 (60.79%), Postives = 164/227 (72.25%), Query Frame = 0


Query: 92  MKLEELLVEETWFEALPGEFEKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFD 151
           +KLE + +E++W E L GEF  PY L + K     + +SGV IYPP +LIFNA N TPFD
Sbjct: 3   IKLENIKIEKSWKEVLKGEFLSPYFLEI-KEKLVCLKNSGVTIYPPGNLIFNAFNLTPFD 62

Query: 152 RVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELKDDLGCSIPSHGNLGKWA 211
           +VKVVILGQDPYH   QAMGLSFSVP+ V+IP SL+NIFKE+  DLG + P+ G+L  WA
Sbjct: 63  KVKVVILGQDPYHEVNQAMGLSFSVPKDVRIPPSLINIFKEINSDLGINEPNCGDLTFWA 122

Query: 212 VQGVLLLNAVLSVREHQANSHAKRGWEQFTDAVIKTISQKKEGIVFLLWGNSAQAKLRLI 271
            QGVLLLNA LSV    ANSH   GW+ FTDAVIKT+SQK+E IVF+LWGN A+AK  LI
Sbjct: 123 KQGVLLLNASLSVSAKIANSHKNFGWQIFTDAVIKTLSQKRENIVFMLWGNFAKAKATLI 182

Query: 272 DEKKHHILKAAHPSGLSANRGFFGCRHFSRTNILLKELGTASIDWQL 319
           D KKH IL AAHPS L A   FFGC+HFS+ N  L   G + I+W L
Sbjct: 183 DAKKHLILTAAHPSPL-AGGAFFGCKHFSKCNNFLISRGISPINWDL 227

[Close]

BLAST of Cmc10g0275971 vs. ExPASy Swiss-Prot
Match: Q5L9D9 (Uracil-DNA glycosylase 2 OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC 9343) OX=272559 GN=ung2 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.4e-71
Identity = 127/218 (58.26%), Postives = 158/218 (72.48%), Query Frame = 0


Query: 99  VEETWFEALPGEFEKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVIL 158
           +EE+W   L  EFEK Y   L +FV++E   S   I+PP  LIFNA N  PFD+VKVVI+
Sbjct: 5   IEESWKTHLEPEFEKDYFRTLTEFVRSEY--SQYQIFPPGKLIFNAFNLCPFDKVKVVII 64

Query: 159 GQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLL 218
           GQDPYHGPGQA GL FSV +GV  P SL+NIFKE+K+D+G   PS GNL +WA QGVLLL
Sbjct: 65  GQDPYHGPGQAHGLCFSVNDGVAFPPSLVNIFKEIKEDIGTPAPSTGNLTRWAEQGVLLL 124

Query: 219 NAVLSVREHQANSHAKRGWEQFTDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHI 278
           NA L+VR HQA SH +RGWE+FTDA I+ +++++E +VF+LWG+ AQ K   ID  KH +
Sbjct: 125 NATLTVRAHQAGSHQRRGWEEFTDAAIRVLAEERENLVFILWGSYAQKKGAFIDRNKHLV 184

Query: 279 LKAAHPSGLSANRGFFGCRHFSRTNILLKELGTASIDW 317
           L +AHPS LSA  GFFG +HFS+TN  LK  G   I+W
Sbjct: 185 LSSAHPSPLSAYNGFFGNKHFSKTNEYLKAHGKTEINW 220

[Close]

BLAST of Cmc10g0275971 vs. ExPASy Swiss-Prot
Match: Q64PM3 (Uracil-DNA glycosylase 2 OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=ung2 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.4e-71
Identity = 127/218 (58.26%), Postives = 158/218 (72.48%), Query Frame = 0


Query: 99  VEETWFEALPGEFEKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVIL 158
           +EE+W   L  EFEK Y   L +FV++E   S   I+PP  LIFNA N  PFD+VKVVI+
Sbjct: 5   IEESWKTHLEPEFEKDYFRTLTEFVRSEY--SQYQIFPPGKLIFNAFNLCPFDKVKVVII 64

Query: 159 GQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLL 218
           GQDPYHGPGQA GL FSV +GV  P SL+NIFKE+K+D+G   PS GNL +WA QGVLLL
Sbjct: 65  GQDPYHGPGQAHGLCFSVNDGVAFPPSLVNIFKEIKEDIGTPAPSTGNLTRWAEQGVLLL 124

Query: 219 NAVLSVREHQANSHAKRGWEQFTDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHI 278
           NA L+VR HQA SH +RGWE+FTDA I+ +++++E +VF+LWG+ AQ K   ID  KH +
Sbjct: 125 NATLTVRAHQAGSHQRRGWEEFTDAAIRVLAEERENLVFILWGSYAQKKGAFIDRNKHLV 184

Query: 279 LKAAHPSGLSANRGFFGCRHFSRTNILLKELGTASIDW 317
           L +AHPS LSA  GFFG +HFS+TN  LK  G   I+W
Sbjct: 185 LSSAHPSPLSAYNGFFGNKHFSKTNEYLKAHGKTEINW 220

[Close]

BLAST of Cmc10g0275971 vs. ExPASy TrEMBL
Match: A0A1S3CPW3 (Uracil-DNA glycosylase OS=Cucumis melo OX=3656 GN=LOC103502882 PE=3 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 6.0e-180
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120
           ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQANSHAKRGWEQF 240
           KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQANSHAKRGWEQF
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQANSHAKRGWEQF 240

Query: 241 TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 RTNILLKELGTASIDWQL 319
           RTNILLKELGTASIDWQL
Sbjct: 301 RTNILLKELGTASIDWQL 318

[Close]

BLAST of Cmc10g0275971 vs. ExPASy TrEMBL
Match: A0A0A0KMG3 (Uracil-DNA glycosylase OS=Cucumis sativus OX=3659 GN=Csa_5G289610 PE=3 SV=1)

HSP 1 Score: 626.3 bits (1614), Expect = 6.9e-176
Identity = 308/318 (96.86%), Postives = 316/318 (99.37%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSS D+SASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60

Query: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120
           ISRMETNKW+ARSKRNLK CSDRVSKWENGC+KLEELLVEETWFEALPGEF+KPYALNLC
Sbjct: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQANSHAKRGWEQF 240
           KIPSSLLNIFKEL+DDLGCSIPSHGNLGKWAVQGVLLLNAVLSVR+HQANSHAKRGWEQF
Sbjct: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240

Query: 241 TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVIKTISQKKEGI+FLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 RTNILLKELGTASIDWQL 319
           RTNILLKE+GTASIDWQL
Sbjct: 301 RTNILLKEMGTASIDWQL 318

[Close]

BLAST of Cmc10g0275971 vs. ExPASy TrEMBL
Match: A0A1S3CND7 (Uracil-DNA glycosylase OS=Cucumis melo OX=3656 GN=LOC103502882 PE=3 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 9.0e-176
Identity = 318/343 (92.71%), Postives = 318/343 (92.71%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120
           ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLS----------------- 240
           KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLS                 
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSATSRILNQKLFKHHQTV 240

Query: 241 --------VREHQANSHAKRGWEQFTDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKK 300
                   VREHQANSHAKRGWEQFTDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKK
Sbjct: 241 MKSNKADIVREHQANSHAKRGWEQFTDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKK 300

Query: 301 HHILKAAHPSGLSANRGFFGCRHFSRTNILLKELGTASIDWQL 319
           HHILKAAHPSGLSANRGFFGCRHFSRTNILLKELGTASIDWQL
Sbjct: 301 HHILKAAHPSGLSANRGFFGCRHFSRTNILLKELGTASIDWQL 343

[Close]

BLAST of Cmc10g0275971 vs. ExPASy TrEMBL
Match: A0A6J1J2E4 (Uracil-DNA glycosylase OS=Cucurbita maxima OX=3661 GN=LOC111480636 PE=3 SV=1)

HSP 1 Score: 595.5 bits (1534), Expect = 1.3e-166
Identity = 291/318 (91.51%), Postives = 308/318 (96.86%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60
           MASSSASL SKTRTLIDIFQPALSKRLKTSQTLKTLAT D+KCDS+LTLASSS D+S+SQ
Sbjct: 1   MASSSASLKSKTRTLIDIFQPALSKRLKTSQTLKTLATTDEKCDSELTLASSSMDISSSQ 60

Query: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120
            SRMETNKW+ARS RNLKI SDRVSKWENGC+KLEELLV+ETWFEALPGEF+KPYALNLC
Sbjct: 61  KSRMETNKWLARSNRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFQKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEICSSGVPIYPPP LIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVETEICSSGVPIYPPPCLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQANSHAKRGWEQF 240
           KIPSSLLNIFKEL++DLGCSIPSHGNL KWAVQGVLLLNAVL+VR+HQANSHAK+GWEQF
Sbjct: 181 KIPSSLLNIFKELREDLGCSIPSHGNLKKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240

Query: 241 TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVI+TISQKKEG+VFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 RTNILLKELGTASIDWQL 319
           RTN+LLKELG  SIDWQL
Sbjct: 301 RTNVLLKELGIGSIDWQL 318

[Close]

BLAST of Cmc10g0275971 vs. ExPASy TrEMBL
Match: A0A6J1EEH8 (Uracil-DNA glycosylase OS=Cucurbita moschata OX=3662 GN=LOC111433476 PE=3 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 5.5e-165
Identity = 289/318 (90.88%), Postives = 307/318 (96.54%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60
           MASSSASL SKTRTLIDIFQPALSKR+KTSQTLKTLAT D+K DS+LTLASSS D+S+SQ
Sbjct: 1   MASSSASLKSKTRTLIDIFQPALSKRIKTSQTLKTLATTDEKGDSELTLASSSMDISSSQ 60

Query: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120
            SRMETNKW+ARSKRNLKI SDRVSKWENGC+KLEELLV+ETWFEALPGEF+KPYALNLC
Sbjct: 61  KSRMETNKWLARSKRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFDKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVETEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQANSHAKRGWEQF 240
           KIPSSLLNIFKEL++DLGCSIPSHGNL KWAVQGVLLLNAVL+VR+HQANSHAK+GWEQF
Sbjct: 181 KIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240

Query: 241 TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300
           TD VIKTISQ KEG+VFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDVVIKTISQNKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 RTNILLKELGTASIDWQL 319
           RTN+LLKELG  +IDWQL
Sbjct: 301 RTNVLLKELGIDAIDWQL 318

[Close]

BLAST of Cmc10g0275971 vs. TAIR 10
Match: AT3G18630.1 (uracil dna glycosylase )

HSP 1 Score: 396.7 bits (1018), Expect = 1.7e-110
Identity = 208/330 (63.03%), Postives = 246/330 (74.55%), Query Frame = 0


Query: 9   SSKTRTLIDIFQPALSKRLKT---------------SQTLKTLATNDDKCDSDLTLASSS 68
           SS  +TL+D FQPA  KRLK                S+ L ++A +  +     ++A  S
Sbjct: 3   SSTPKTLMDFFQPA--KRLKASPSSSSFPAVSVAGGSRDLGSVANSPPRVTVTTSVADDS 62

Query: 69  TDMSASQISRMETNKWMARSKRNLKICSDRV--SKWENGC-MKLEELLVEETWFEALPGE 128
           + ++  QI+R E NK++A+SKRNL +CS+RV  +K E  C + L ELLVEE+W +ALPGE
Sbjct: 63  SGLTPEQIARAEFNKFVAKSKRNLAVCSERVTKAKSEGNCYVPLSELLVEESWLKALPGE 122

Query: 129 FEKPYALNLCKFVQTEIC--SSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQ 188
           F KPYA +L  F++ EI   S    IYPP  LIFNALN+TPFDRVK VI+GQDPYHGPGQ
Sbjct: 123 FHKPYAKSLSDFLEREIITDSKSPLIYPPQHLIFNALNTTPFDRVKTVIIGQDPYHGPGQ 182

Query: 189 AMGLSFSVPEGVKIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQ 248
           AMGLSFSVPEG K+PSSLLNIFKEL  D+GCSIP HGNL KWAVQGVLLLNAVL+VR  Q
Sbjct: 183 AMGLSFSVPEGEKLPSSLLNIFKELHKDVGCSIPRHGNLQKWAVQGVLLLNAVLTVRSKQ 242

Query: 249 ANSHAKRGWEQFTDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLS 308
            NSHAK+GWEQFTDAVI++ISQ+KEG+VFLLWG  AQ K +LID  KHHIL AAHPSGLS
Sbjct: 243 PNSHAKKGWEQFTDAVIQSISQQKEGVVFLLWGRYAQEKSKLIDATKHHILTAAHPSGLS 302

Query: 309 ANRGFFGCRHFSRTNILLKELGTASIDWQL 319
           ANRGFF CRHFSR N LL+E+G   IDWQL
Sbjct: 303 ANRGFFDCRHFSRANQLLEEMGIPPIDWQL 330

The following BLAST results are available for this feature:

BLAST of Cmc10g0275971 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465227.1	1.2e-179	100.00	PREDICTED: uracil-DNA glycosylase, mitochondrial isoform X2 [Cucumis melo]	[more]
XP_004140430.1	1.4e-175	96.86	uracil-DNA glycosylase, mitochondrial [Cucumis sativus] >KGN50850.1 hypothetical...	[more]
XP_008465225.1	1.9e-175	92.71	PREDICTED: uracil-DNA glycosylase, mitochondrial isoform X1 [Cucumis melo]	[more]
XP_038891400.1	1.1e-170	94.97	uracil-DNA glycosylase, mitochondrial [Benincasa hispida]	[more]
XP_022981553.1	2.7e-166	91.51	uracil-DNA glycosylase, mitochondrial [Cucurbita maxima]	[more]

BLAST of Cmc10g0275971 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIH6	2.4e-109	63.03	Uracil-DNA glycosylase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=UNG PE=...	[more]
C1DQR0	5.2e-72	58.93	Uracil-DNA glycosylase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) OX=...	[more]
A7I0A8	2.6e-71	60.79	Uracil-DNA glycosylase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568...	[more]
Q5L9D9	4.4e-71	58.26	Uracil-DNA glycosylase 2 OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 /...	[more]
Q64PM3	4.4e-71	58.26	Uracil-DNA glycosylase 2 OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=ung...	[more]

BLAST of Cmc10g0275971 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CPW3	6.0e-180	100.00	Uracil-DNA glycosylase OS=Cucumis melo OX=3656 GN=LOC103502882 PE=3 SV=1	[more]
A0A0A0KMG3	6.9e-176	96.86	Uracil-DNA glycosylase OS=Cucumis sativus OX=3659 GN=Csa_5G289610 PE=3 SV=1	[more]
A0A1S3CND7	9.0e-176	92.71	Uracil-DNA glycosylase OS=Cucumis melo OX=3656 GN=LOC103502882 PE=3 SV=1	[more]
A0A6J1J2E4	1.3e-166	91.51	Uracil-DNA glycosylase OS=Cucurbita maxima OX=3661 GN=LOC111480636 PE=3 SV=1	[more]
A0A6J1EEH8	5.5e-165	90.88	Uracil-DNA glycosylase OS=Cucurbita moschata OX=3662 GN=LOC111433476 PE=3 SV=1	[more]

BLAST of Cmc10g0275971 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18630.1	1.7e-110	63.03	uracil dna glycosylase	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005122	Uracil-DNA glycosylase-like	SMART	SM00986	UDG_2	coord: 146..306 e-value: 4.1E-39 score: 145.9
IPR005122	Uracil-DNA glycosylase-like	PFAM	PF03167	UDG	coord: 151..307 e-value: 2.0E-24 score: 86.3
None	No IPR available	SMART	SM00987	UDG_2_a	coord: 146..306 e-value: 4.1E-39 score: 145.9
IPR002043	Uracil-DNA glycosylase family 1	TIGRFAM	TIGR00628	TIGR00628	coord: 101..308 e-value: 2.7E-78 score: 260.6
IPR002043	Uracil-DNA glycosylase family 1	PANTHER	PTHR11264	URACIL-DNA GLYCOSYLASE	coord: 34..318
IPR002043	Uracil-DNA glycosylase family 1	HAMAP	MF_00148	UDG	coord: 100..317 score: 38.599331
IPR002043	Uracil-DNA glycosylase family 1	CDD	cd10027	UDG-F1-like	coord: 115..316 e-value: 3.8317E-130 score: 367.16
IPR036895	Uracil-DNA glycosylase-like domain superfamily	GENE3D	3.40.470.10		coord: 79..318 e-value: 5.0E-97 score: 326.2
IPR036895	Uracil-DNA glycosylase-like domain superfamily	SUPERFAMILY	52141	Uracil-DNA glycosylase-like	coord: 98..318
IPR018085	Uracil-DNA glycosylase, active site	PROSITE	PS00130	U_DNA_GLYCOSYLASE	coord: 154..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0275971.1	Cmc10g0275971.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006284	base-excision repair
biological_process	GO:0006281	DNA repair
molecular_function	GO:0004844	uracil DNA N-glycosylase activity
molecular_function	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds