Cmc10g0275741 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0275741
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr10: 9969181 .. 9969630 (-)
RNA-Seq Expression	Cmc10g0275741
Synteny	Cmc10g0275741

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCCGCAGAATTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTCGTTAAGAAGAAGGACGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTGAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGAATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTTGTTTGACGAATGCTCCGGCAGTATTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATTGTGTTTATCGACGATATCTGA

mRNA sequence

ATGGCCCCCGCAGAATTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTCGTTAAGAAGAAGGACGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTGAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGAATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTTGTTTGACGAATGCTCCGGCAGTATTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATTGTGTTTATCGACGATATCTGA

Coding sequence (CDS)

ATGGCCCCCGCAGAATTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTCGTTAAGAAGAAGGACGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTGAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGAATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTTGTTTGACGAATGCTCCGGCAGTATTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATTGTGTTTATCGACGATATCTGA

Protein sequence

MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFCLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI

Homology

[Close]

BLAST of Cmc10g0275741 vs. NCBI nr
Match: KAA0037817.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 300.4 bits (768), Expect = 8.4e-78
Identity = 147/149 (98.66%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 442 MAPAELKELKVQLQELLDKGFIRPSLSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 501

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFCLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFCLT
Sbjct: 502 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFCLT 561

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDI 150
           NAPAVFMDLMNRVFREFLDTFVIVFIDDI
Sbjct: 562 NAPAVFMDLMNRVFREFLDTFVIVFIDDI 590

[Close]

BLAST of Cmc10g0275741 vs. NCBI nr
Match: KAA0036671.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 299.7 bits (766), Expect = 1.4e-77
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 833 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 892

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFCLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSF LT
Sbjct: 893 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 952

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDI 150
           NAPAVFMDLMNRVFREFLDTFVIVFIDDI
Sbjct: 953 NAPAVFMDLMNRVFREFLDTFVIVFIDDI 981

[Close]

BLAST of Cmc10g0275741 vs. NCBI nr
Match: KAA0040699.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 299.7 bits (766), Expect = 1.4e-77
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 731 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 790

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFCLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSF LT
Sbjct: 791 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 850

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDI 150
           NAPAVFMDLMNRVFREFLDTFVIVFIDDI
Sbjct: 851 NAPAVFMDLMNRVFREFLDTFVIVFIDDI 879

[Close]

BLAST of Cmc10g0275741 vs. NCBI nr
Match: KAA0058399.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 299.7 bits (766), Expect = 1.4e-77
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 811 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 870

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFCLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSF LT
Sbjct: 871 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 930

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDI 150
           NAPAVFMDLMNRVFREFLDTFVIVFIDDI
Sbjct: 931 NAPAVFMDLMNRVFREFLDTFVIVFIDDI 959

[Close]

BLAST of Cmc10g0275741 vs. NCBI nr
Match: KAA0066266.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 299.7 bits (766), Expect = 1.4e-77
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 154 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 213

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFCLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSF LT
Sbjct: 214 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 273

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDI 150
           NAPAVFMDLMNRVFREFLDTFVIVFIDDI
Sbjct: 274 NAPAVFMDLMNRVFREFLDTFVIVFIDDI 302

[Close]

BLAST of Cmc10g0275741 vs. ExPASy Swiss-Prot
Match: P31843 (RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.5e-32
Identity = 66/108 (61.11%), Postives = 84/108 (77.78%), Query Frame = 0


Query: 42  SMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKT 101
           S+R+CIDYR L KVT+KN+YP+PR+DDLFD+L  AT F+K+DLRSGY Q+RI   D PKT
Sbjct: 5   SLRMCIDYRALTKVTIKNKYPIPRVDDLFDRLAQATWFTKLDLRSGYWQVRIAKGDEPKT 64

Query: 102 AFRSRYGHYEFIVMSFCLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 150
              +RYG +EF VM F LTNA A F +LMN V  E+LD FV+V++DD+
Sbjct: 65  TCVTRYGSFEFRVMPFGLTNALATFCNLMNNVLYEYLDHFVVVYLDDL 112

[Close]

BLAST of Cmc10g0275741 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 139.0 bits (349), Expect = 4.2e-32
Identity = 69/143 (48.25%), Postives = 96/143 (67.13%), Query Frame = 0


Query: 7   KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI 66
           +E+   +Q+LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRI
Sbjct: 610 QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 669

Query: 67  DDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFCLTNAPAVF 126
           D+L  ++  A +F+ +DL SGYHQ+ ++ +D  KTAF +  G YE+ VM F L NAP+ F
Sbjct: 670 DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 729

Query: 127 MDLMNRVFREFLDTFVIVFIDDI 150
              M   FR+    FV V++DDI
Sbjct: 730 ARYMADTFRDL--RFVNVYLDDI 750

[Close]

BLAST of Cmc10g0275741 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 4.2e-32
Identity = 69/143 (48.25%), Postives = 96/143 (67.13%), Query Frame = 0


Query: 7   KELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI 66
           +E+   +Q+LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRI
Sbjct: 636 QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 695

Query: 67  DDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFCLTNAPAVF 126
           D+L  ++  A +F+ +DL SGYHQ+ ++ +D  KTAF +  G YE+ VM F L NAP+ F
Sbjct: 696 DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 755

Query: 127 MDLMNRVFREFLDTFVIVFIDDI 150
              M   FR+    FV V++DDI
Sbjct: 756 ARYMADTFRDL--RFVNVYLDDI 776

[Close]

BLAST of Cmc10g0275741 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.2e-30
Identity = 63/148 (42.57%), Postives = 100/148 (67.57%), Query Frame = 0


Query: 7   KELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRY 66
           +E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ IDYR+LN++TV +R+
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRH 280

Query: 67  PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFCLTN 126
           P+P +D++  +L     F+ IDL  G+HQ+ +  E V KTAF +++GHYE++ M F L N
Sbjct: 281 PIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN 340

Query: 127 APAVFMDLMNRVFREFLDTFVIVFIDDI 150
           APA F   MN + R  L+   +V++DDI
Sbjct: 341 APATFQRCMNDILRPLLNKHCLVYLDDI 368

[Close]

BLAST of Cmc10g0275741 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.2e-29
Identity = 61/147 (41.50%), Postives = 95/147 (64.63%), Query Frame = 0


Query: 8   ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYP 67
           E++ Q+QE+L++G IR S SP+ +P   V KK         R+ IDYR+LN++T+ +RYP
Sbjct: 221 EVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYP 280

Query: 68  LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFCLTNA 127
           +P +D++  +L     F+ IDL  G+HQ+ + +E + KTAF ++ GHYE++ M F L NA
Sbjct: 281 IPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNA 340

Query: 128 PAVFMDLMNRVFREFLDTFVIVFIDDI 150
           PA F   MN + R  L+   +V++DDI
Sbjct: 341 PATFQRCMNNILRPLLNKHCLVYLDDI 367

[Close]

BLAST of Cmc10g0275741 vs. ExPASy TrEMBL
Match: A0A5A7T8B6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4066G00070 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.1e-78
Identity = 147/149 (98.66%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 442 MAPAELKELKVQLQELLDKGFIRPSLSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 501

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFCLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIVMSFCLT
Sbjct: 502 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFCLT 561

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDI 150
           NAPAVFMDLMNRVFREFLDTFVIVFIDDI
Sbjct: 562 NAPAVFMDLMNRVFREFLDTFVIVFIDDI 590

[Close]

BLAST of Cmc10g0275741 vs. ExPASy TrEMBL
Match: A0A5A7VIT9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003090 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 6.9e-78
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 154 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 213

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFCLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSF LT
Sbjct: 214 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 273

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDI 150
           NAPAVFMDLMNRVFREFLDTFVIVFIDDI
Sbjct: 274 NAPAVFMDLMNRVFREFLDTFVIVFIDDI 302

[Close]

BLAST of Cmc10g0275741 vs. ExPASy TrEMBL
Match: A0A5A7VGW8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G00940 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 6.9e-78
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 396 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 455

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFCLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSF LT
Sbjct: 456 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 515

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDI 150
           NAPAVFMDLMNRVFREFLDTFVIVFIDDI
Sbjct: 516 NAPAVFMDLMNRVFREFLDTFVIVFIDDI 544

[Close]

BLAST of Cmc10g0275741 vs. ExPASy TrEMBL
Match: A0A5A7TXE4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00060 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 6.9e-78
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 377 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 436

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFCLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSF LT
Sbjct: 437 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 496

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDI 150
           NAPAVFMDLMNRVFREFLDTFVIVFIDDI
Sbjct: 497 NAPAVFMDLMNRVFREFLDTFVIVFIDDI 525

[Close]

BLAST of Cmc10g0275741 vs. ExPASy TrEMBL
Match: A0A5A7THF3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold529G00140 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 6.9e-78
Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 731 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 790

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFCLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSF LT
Sbjct: 791 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 850

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDI 150
           NAPAVFMDLMNRVFREFLDTFVIVFIDDI
Sbjct: 851 NAPAVFMDLMNRVFREFLDTFVIVFIDDI 879

The following BLAST results are available for this feature:

BLAST of Cmc10g0275741 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037817.1	8.4e-78	98.66	pol protein [Cucumis melo var. makuwa]	[more]
KAA0036671.1	1.4e-77	99.33	gag protease polyprotein [Cucumis melo var. makuwa]	[more]
KAA0040699.1	1.4e-77	99.33	pol protein [Cucumis melo var. makuwa]	[more]
KAA0058399.1	1.4e-77	99.33	pol protein [Cucumis melo var. makuwa]	[more]
KAA0066266.1	1.4e-77	99.33	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc10g0275741 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31843	2.5e-32	61.11	RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1	[more]
Q99315	4.2e-32	48.25	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	4.2e-32	48.25	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P04323	5.2e-30	42.57	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	1.2e-29	41.50	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]

BLAST of Cmc10g0275741 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T8B6	4.1e-78	98.66	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40...	[more]
A0A5A7VIT9	6.9e-78	99.33	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21...	[more]
A0A5A7VGW8	6.9e-78	99.33	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48...	[more]
A0A5A7TXE4	6.9e-78	99.33	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold15...	[more]
A0A5A7THF3	6.9e-78	99.33	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold52...	[more]

BLAST of Cmc10g0275741 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..121 e-value: 2.9E-64 score: 218.3
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 12..147
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 12..147
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..149 e-value: 1.08738E-69 score: 205.907
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..149 e-value: 2.9E-64 score: 218.3
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..149 e-value: 2.0E-14 score: 53.7
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0275741.1	Cmc10g0275741.1	mRNA