Cmc10g0275401 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0275401
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr10: 9342031 .. 9343496 (+)
RNA-Seq Expression	Cmc10g0275401
Synteny	Cmc10g0275401

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCAGAGGAGGTGGCTTGAGTTGGTGAAAGACTATGACTGCGAGATTCTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGATGCGCTAAGTAGGAAGGTTGCACATTCAGCAGCGCTGATCACCAAGCAAACCCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGAGAGGTTACCTCACAGTTGGCTCAGTTGTCAGTACAGCCAACCTTGAGGCAAAGGATTATCGTTGCTCAGCTGAATGATCCTTACTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGGGCAAGGTGAGGACTTCTCCATATCCTCTGATGATGGCCTTATGTTTGAGGGACGCTTGTGTGTGCCGGAAGACAGCGCAGTCAAGACAGAGCTTTTGACTGAGGCTCACAGTTCTCCATTTACCATGCACCCTGGAAGTATGAAGATGTACCAGGACTTAAGGAGTGCCTATTGGTGGAGAAACATGAAGAGAGAGGTGGCAGATTTTGTCAGTAGGTGCTTGGTGTGCCAGCAAGTGAAGGCACCTAGACAGCGATCAGCCGGGTTGTTACAACCCTTGAGTGTACCAGGATGGAAATGGGAAAGCGTGTCGACGGACTTCATCACGGAACTGCCCAAAACCCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGATAGACTCACGAAGTCAGCCCACTTTGTGCCAGGGAAGTCCACTTACACTGCCAGTAAGTGGGGGCAGTTATATATGTCAGAGATTGTGAGACTACATGGAGTACCTGTATCCATCATTTCAGACAGAGACACTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTCGCATTAGGTACGAGGGTAGACTTCAGTACGACATTCCACCCTCAGACTGATGGTCAGATAGAGAGATTGAACCAGATATTGGAAGACATGTTGCGGGCCTACGTGCTAGAGTTTTCAGGGAGTTGGGACTCCCATCTGCATCTGATGGAGTTCGCCTATAATAACAGCTACCAAGCTACTATCGGTATGGCACCGTTTGAGGCTCTGTATGGTAAGTGCTGTAGATCTCCTATCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGTCCCGAGTTAGTTCAGACTACCAATGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCACAGAGCAGACAGAAGAGTTATGTTGATGTACGGCATAAGGATCTCGAGTTTGAGGTGGGAGACATGGTCTTTCTGAAGGTAGCACCCGTGAAGGGTGTTCTGAGGTTCGAGAAGAAGGGGAAGCTGAGCCCACGCTTCGTAGGGCCGTTTGAGATACAGGAGCGGATTGGCCCTGTGGCTTATCGCTTGGTGCTACCCCCATCTTTGTTTGCAGTGCATGATGTATTCCATGTCTCCATGCTGAGGAGGTACGTCGCAGACCCGACACATGTAGTGGACTTTGA

mRNA sequence

ATGAGGCAGAGGAGGTGGCTTGAGTTGGTGAAAGACTATGACTGCGAGATTCTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGATGCGCTAAGTAGGAAGGTTGCACATTCAGCAGCGCTGATCACCAAGCAAACCCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGAGAGGTTACCTCACAGTTGGCTCAGTTGTCAGTACAGCCAACCTTGAGGCAAAGGATTATCGTTGCTCAGCTGAATGATCCTTACTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGGGCAAGGTGAGGACTTCTCCATATCCTCTGATGATGGCCTTATGTTTGAGGGACGCTTGTGTGTGCCGGAAGACAGCGCAGTCAAGACAGAGCTTTTGACTGAGGCTCACAGTTCTCCATTTACCATGCACCCTGGAAGTATGAAGATGTACCAGGACTTAAGGAGTGCCTATTGGTGGAGAAACATGAAGAGAGAGGTGGCAGATTTTGTCAGTAGGTGCTTGGTGTGCCAGCAAGTGAAGGCACCTAGACAGCGATCAGCCGGGTTGTTACAACCCTTGAGTGTACCAGGATGGAAATGGGAAAGCGTGTCGACGGACTTCATCACGGAACTGCCCAAAACCCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGATAGACTCACGAAGTCAGCCCACTTTGTGCCAGGGAAGTCCACTTACACTGCCAGTAAGTGGGGGCAGTTATATATGTCAGAGATTGTGAGACTACATGGAGTACCTGTATCCATCATTTCAGACAGAGACACTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTCGCATTAGGTACGAGGGTAGACTTCAGTACGACATTCCACCCTCAGACTGATGGTCAGATAGAGAGATTGAACCAGATATTGGAAGACATGTTGCGGGCCTACGTGCTAGAGTTTTCAGGGAGTTGGGACTCCCATCTGCATCTGATGGAGTTCGCCTATAATAACAGCTACCAAGCTACTATCGGTATGGCACCGTTTGAGGCTCTGTATGGTAAGTGCTGTAGATCTCCTATCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGTCCCGAGTTAGTTCAGACTACCAATGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCACAGAGCAGACAGAAGAGTTATGTTGATGTACGGCATAAGGATCTCGAGTTTGAGGTGGGAGACATGGTCTTTCTGAAGGTAGCACCCGTGAAGGGTGTTCTGAGGTTCGAGAAGAAGGGGAAGCTGAGCCCACGCTTCGTAGGGCCGTTTGAGATACAGGAGCGGATTGGCCCTGTGGCTTATCGCTTGGTACGTCGCAGACCCGACACATGTAGTGGACTTTGA

Coding sequence (CDS)

ATGAGGCAGAGGAGGTGGCTTGAGTTGGTGAAAGACTATGACTGCGAGATTCTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGATGCGCTAAGTAGGAAGGTTGCACATTCAGCAGCGCTGATCACCAAGCAAACCCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGAGAGGTTACCTCACAGTTGGCTCAGTTGTCAGTACAGCCAACCTTGAGGCAAAGGATTATCGTTGCTCAGCTGAATGATCCTTACTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGGGCAAGGTGAGGACTTCTCCATATCCTCTGATGATGGCCTTATGTTTGAGGGACGCTTGTGTGTGCCGGAAGACAGCGCAGTCAAGACAGAGCTTTTGACTGAGGCTCACAGTTCTCCATTTACCATGCACCCTGGAAGTATGAAGATGTACCAGGACTTAAGGAGTGCCTATTGGTGGAGAAACATGAAGAGAGAGGTGGCAGATTTTGTCAGTAGGTGCTTGGTGTGCCAGCAAGTGAAGGCACCTAGACAGCGATCAGCCGGGTTGTTACAACCCTTGAGTGTACCAGGATGGAAATGGGAAAGCGTGTCGACGGACTTCATCACGGAACTGCCCAAAACCCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGATAGACTCACGAAGTCAGCCCACTTTGTGCCAGGGAAGTCCACTTACACTGCCAGTAAGTGGGGGCAGTTATATATGTCAGAGATTGTGAGACTACATGGAGTACCTGTATCCATCATTTCAGACAGAGACACTCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTCGCATTAGGTACGAGGGTAGACTTCAGTACGACATTCCACCCTCAGACTGATGGTCAGATAGAGAGATTGAACCAGATATTGGAAGACATGTTGCGGGCCTACGTGCTAGAGTTTTCAGGGAGTTGGGACTCCCATCTGCATCTGATGGAGTTCGCCTATAATAACAGCTACCAAGCTACTATCGGTATGGCACCGTTTGAGGCTCTGTATGGTAAGTGCTGTAGATCTCCTATCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGTCCCGAGTTAGTTCAGACTACCAATGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCACAGAGCAGACAGAAGAGTTATGTTGATGTACGGCATAAGGATCTCGAGTTTGAGGTGGGAGACATGGTCTTTCTGAAGGTAGCACCCGTGAAGGGTGTTCTGAGGTTCGAGAAGAAGGGGAAGCTGAGCCCACGCTTCGTAGGGCCGTTTGAGATACAGGAGCGGATTGGCCCTGTGGCTTATCGCTTGGTACGTCGCAGACCCGACACATGTAGTGGACTTTGA

Protein sequence

MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSMKMYQDLRSAYWWRNMKREVADFVSRCLVCQQVKAPRQRSAGLLQPLSVPGWKWESVSTDFITELPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMSEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRVDFSTTFHPQTDGQIERLNQILEDMLRAYVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPICWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYVDVRHKDLEFEVGDMVFLKVAPVKGVLRFEKKGKLSPRFVGPFEIQERIGPVAYRLVRRRPDTCSGL

Homology

[Close]

BLAST of Cmc10g0275401 vs. NCBI nr
Match: KAA0040942.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 877.9 bits (2267), Expect = 4.0e-251
Identity = 431/457 (94.31%), Postives = 439/457 (96.06%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60
           MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS
Sbjct: 257 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 316

Query: 61  VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRL 120
           VGEVT+QLAQLSVQPTLRQ+II AQLNDPYL EKRR+VETGQGEDFSISSDDGLMFEGRL
Sbjct: 317 VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 376

Query: 121 CVPEDSAVKTELLTEAHSSPFTMHPGSMKMYQDLRSAYWWRNMKREVADFVSRCLVCQQV 180
           CVPEDSAVKTELLTEAHSSPFTMHPGS KMYQDLRS YWWR MKREVADFVSRCLVCQQV
Sbjct: 377 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 436

Query: 181 KAPRQRSAGLLQPLSVPGWKWESVSTDFITELPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240
           KAPRQ  AGLLQPLSVPGWKWESVS DFIT LPKTLKG+TVIWVVVDRLTKSAHFVPGKS
Sbjct: 437 KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGHTVIWVVVDRLTKSAHFVPGKS 496

Query: 241 TYTASKWGQLYMSEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRVDFSTTFHPQTD 300
           TYTASKWGQLYM+EIVRLHGVPVSIISDRD RFTSKFWKGLQLALGTR+DFST FHPQTD
Sbjct: 497 TYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD 556

Query: 301 GQIERLNQILEDMLRAYVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360
           GQ ERLNQILEDMLRA VLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP
Sbjct: 557 GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 616

Query: 361 ICWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYVDVRHKDLEFEVGDMVFLK 420
           +CWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSY DVR KDLEFEVGDMVFLK
Sbjct: 617 VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLK 676

Query: 421 VAPVKGVLRFEKKGKLSPRFVGPFEIQERIGPVAYRL 458
           VAP+KGVLRF KKGKLSPRFVG FEI ERIGPVAYRL
Sbjct: 677 VAPMKGVLRFAKKGKLSPRFVGSFEILERIGPVAYRL 713

[Close]

BLAST of Cmc10g0275401 vs. NCBI nr
Match: KAA0060745.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 875.2 bits (2260), Expect = 2.6e-250
Identity = 432/457 (94.53%), Postives = 439/457 (96.06%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60
            MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS
Sbjct: 941  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 1000

Query: 61   VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRL 120
            VGEVT+QLAQLSVQPTLRQ+II AQLNDPYL EKRR+VETGQGEDFSIS DDGLMFEGRL
Sbjct: 1001 VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISFDDGLMFEGRL 1060

Query: 121  CVPEDSAVKTELLTEAHSSPFTMHPGSMKMYQDLRSAYWWRNMKREVADFVSRCLVCQQV 180
            CVPEDSAVKTELLTEAHSS FTMHPGS KMYQDLRS YWWR MKREVADFVSRCLVCQQV
Sbjct: 1061 CVPEDSAVKTELLTEAHSSLFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 1120

Query: 181  KAPRQRSAGLLQPLSVPGWKWESVSTDFITELPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240
            KAPRQ  AGLLQPLSVPGWKWESVS DFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1121 KAPRQCPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 1180

Query: 241  TYTASKWGQLYMSEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRVDFSTTFHPQTD 300
            TYTASKWGQLYM+EIVRLHGVPVSIISDRD RFTSKFWKGLQLALGTR+DFSTTFHPQTD
Sbjct: 1181 TYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTD 1240

Query: 301  GQIERLNQILEDMLRAYVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360
            GQIERLNQILEDMLRA VLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP
Sbjct: 1241 GQIERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 1300

Query: 361  ICWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYVDVRHKDLEFEVGDMVFLK 420
            +CWGEVGEQRMLG ELVQTTNAAIQKIRARMLTAQSRQKSY DVR KDLEFEVGDMVFLK
Sbjct: 1301 VCWGEVGEQRMLGLELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLK 1360

Query: 421  VAPVKGVLRFEKKGKLSPRFVGPFEIQERIGPVAYRL 458
            VAP+KGVLRF KKGKLSPRFVGPFEI ERIGPVAYRL
Sbjct: 1361 VAPMKGVLRFVKKGKLSPRFVGPFEILERIGPVAYRL 1397

[Close]

BLAST of Cmc10g0275401 vs. NCBI nr
Match: KAA0041490.1 (hypothetical protein E6C27_scaffold6G00780 [Cucumis melo var. makuwa])

HSP 1 Score: 874.8 bits (2259), Expect = 3.4e-250
Identity = 432/457 (94.53%), Postives = 439/457 (96.06%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60
            MR RRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQ PLLRDFERAEIAVS
Sbjct: 729  MRHRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDFERAEIAVS 788

Query: 61   VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRL 120
            VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSIS DDGLMFEGRL
Sbjct: 789  VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISFDDGLMFEGRL 848

Query: 121  CVPEDSAVKTELLTEAHSSPFTMHPGSMKMYQDLRSAYWWRNMKREVADFVSRCLVCQQV 180
            CVPEDSAVKTELLTEAHSSPFTMHPGS KMYQDLRS YWWRNMKREVADFVSRCLVCQQV
Sbjct: 849  CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 908

Query: 181  KAPRQRSAGLLQPLSVPGWKWESVSTDFITELPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240
            KAPRQR AGLLQPLSVPGWKWESVS DFIT LPKTLKGYTVIWVVVDRLTKSAHFV GKS
Sbjct: 909  KAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVSGKS 968

Query: 241  TYTASKWGQLYMSEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRVDFSTTFHPQTD 300
            TYTASKWGQLYM+EIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTR+DFST FHPQTD
Sbjct: 969  TYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTD 1028

Query: 301  GQIERLNQILEDMLRAYVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360
            G+ +RLNQILEDMLRA VLEFSGSWDSHLHLMEFAYNNSYQATIGMA FEALYGKCCRSP
Sbjct: 1029 GRTKRLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMALFEALYGKCCRSP 1088

Query: 361  ICWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYVDVRHKDLEFEVGDMVFLK 420
            +CWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS+QKSY DVR KDLEFEVGDMVFLK
Sbjct: 1089 VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSKQKSYADVRRKDLEFEVGDMVFLK 1148

Query: 421  VAPVKGVLRFEKKGKLSPRFVGPFEIQERIGPVAYRL 458
            VAP+KGVLRFE KGKLSPRFVGPFEI ERIGPVAY L
Sbjct: 1149 VAPMKGVLRFEMKGKLSPRFVGPFEILERIGPVAYCL 1185

[Close]

BLAST of Cmc10g0275401 vs. NCBI nr
Match: KAA0045309.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 874.8 bits (2259), Expect = 3.4e-250
Identity = 429/457 (93.87%), Postives = 438/457 (95.84%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60
           MRQRRWLELVKDYDCEILYHPGKANVVAD+LSRKVAHSAALITKQTPLLRDFERAEIAVS
Sbjct: 507 MRQRRWLELVKDYDCEILYHPGKANVVADSLSRKVAHSAALITKQTPLLRDFERAEIAVS 566

Query: 61  VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRL 120
           VGEVT+QLAQLSVQPTLRQ+II AQLNDPYL EKRR+VETGQGEDFSISSDDGLMFEGRL
Sbjct: 567 VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 626

Query: 121 CVPEDSAVKTELLTEAHSSPFTMHPGSMKMYQDLRSAYWWRNMKREVADFVSRCLVCQQV 180
           CVPEDSAVKTELLTEAHSSPFTMHPGS KMYQDLRS YWWR MKREVADFVSRCLVCQQV
Sbjct: 627 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 686

Query: 181 KAPRQRSAGLLQPLSVPGWKWESVSTDFITELPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240
           KAPRQ  AGLLQPLSVPGWKWESVS DFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKS
Sbjct: 687 KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 746

Query: 241 TYTASKWGQLYMSEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRVDFSTTFHPQTD 300
           TYTASKWGQLY++EIVRLHGVPVSIISDRD RFTSKFWKGLQLAL TR+DFST FHPQTD
Sbjct: 747 TYTASKWGQLYVTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALCTRLDFSTAFHPQTD 806

Query: 301 GQIERLNQILEDMLRAYVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360
           GQ ERLNQILEDMLRA VLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP
Sbjct: 807 GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 866

Query: 361 ICWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYVDVRHKDLEFEVGDMVFLK 420
           +CWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSY DVR KDLEFEVGDMVFLK
Sbjct: 867 VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLK 926

Query: 421 VAPVKGVLRFEKKGKLSPRFVGPFEIQERIGPVAYRL 458
           V P+KGVLRF KKGKLSPRFVGPFEI ERIGPVAYRL
Sbjct: 927 VPPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRL 963

[Close]

BLAST of Cmc10g0275401 vs. NCBI nr
Match: KAA0032541.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 872.5 bits (2253), Expect = 1.7e-249
Identity = 427/457 (93.44%), Postives = 438/457 (95.84%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60
            MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS
Sbjct: 941  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 1000

Query: 61   VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRL 120
            VGEVT+QLAQLSVQPTLRQ+II AQ NDPYL EKRR+VETGQGEDFSIS+DDGLMFEGRL
Sbjct: 1001 VGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRL 1060

Query: 121  CVPEDSAVKTELLTEAHSSPFTMHPGSMKMYQDLRSAYWWRNMKREVADFVSRCLVCQQV 180
            CVPED+AVKTELLTEAHSSPFTMHPGS KMYQDLRS YWWR MKREVADFVSRCLVCQQV
Sbjct: 1061 CVPEDTAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 1120

Query: 181  KAPRQRSAGLLQPLSVPGWKWESVSTDFITELPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240
            K+PRQ  AGL+Q LSVPGWKWESVS DFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1121 KSPRQHPAGLMQLLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 1180

Query: 241  TYTASKWGQLYMSEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRVDFSTTFHPQTD 300
            TYTASKWGQLYM+EIVRLHGVPVSIISDRD RFTSKFWKGLQLALGTR+DFST FHPQTD
Sbjct: 1181 TYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD 1240

Query: 301  GQIERLNQILEDMLRAYVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360
            GQ ERLNQILEDMLRA VLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP
Sbjct: 1241 GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 1300

Query: 361  ICWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYVDVRHKDLEFEVGDMVFLK 420
            +CWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSY DVR KDLEFEVGDMVFLK
Sbjct: 1301 VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLK 1360

Query: 421  VAPVKGVLRFEKKGKLSPRFVGPFEIQERIGPVAYRL 458
            VAP+KGVLRF KKGKLSPRFVGPFEI ERIGPVAYRL
Sbjct: 1361 VAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRL 1397

[Close]

BLAST of Cmc10g0275401 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.9e-56
Identity = 139/465 (29.89%), Postives = 231/465 (49.68%), Query Frame = 0


Query: 2    RQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSV 61
            R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSI---- 859

Query: 62   GEVTSQLAQLSVQPTLRQRIIVAQLNDPYLV-----EKRRLVETGQGEDFSISSDDGLMF 121
                + + Q+S+    + +++    ND  L+     E +R+ E       +I   DGL+ 
Sbjct: 860  ----NFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEE-------NIQLKDGLLI 919

Query: 122  EGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSMKMYQDLRSAYWWRNMKREVADFVSRC 181
              +  + +P D+ +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C
Sbjct: 920  NSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNC 979

Query: 182  LVCQQVKAPRQRSAGLLQPLSVPGWKWESVSTDFITELPKTLKGYTVIWVVVDRLTKSAH 241
              CQ  K+   +  G LQP+      WES+S DFIT LP++  GY  ++VVVDR +K A 
Sbjct: 980  HTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAI 1039

Query: 242  FVPGKSTYTASKWGQLYMSEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRVDFSTT 301
             VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  
Sbjct: 1040 LVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLP 1099

Query: 302  FHPQTDGQIERLNQILEDMLRAYVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 361
            + PQTDGQ ER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++ 
Sbjct: 1100 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1159

Query: 362  -KCCRSPICWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYVDVRHKDL-EFE 421
                 SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+
Sbjct: 1160 YSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQ 1219

Query: 422  VGDMVFLKVAPVKGVLRFEKKGKLSPRFVGPFEIQERIGPVAYRL 458
             GD+V +K     G L   K  KL+P F GPF + ++ GP  Y L
Sbjct: 1220 PGDLVMVKRTKT-GFL--HKSNKLAPSFAGPFYVLQKSGPNNYEL 1235

[Close]

BLAST of Cmc10g0275401 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.9e-56
Identity = 139/465 (29.89%), Postives = 231/465 (49.68%), Query Frame = 0


Query: 2    RQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSV 61
            R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSI---- 859

Query: 62   GEVTSQLAQLSVQPTLRQRIIVAQLNDPYLV-----EKRRLVETGQGEDFSISSDDGLMF 121
                + + Q+S+    + +++    ND  L+     E +R+ E       +I   DGL+ 
Sbjct: 860  ----NFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEE-------NIQLKDGLLI 919

Query: 122  EGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSMKMYQDLRSAYWWRNMKREVADFVSRC 181
              +  + +P D+ +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C
Sbjct: 920  NSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNC 979

Query: 182  LVCQQVKAPRQRSAGLLQPLSVPGWKWESVSTDFITELPKTLKGYTVIWVVVDRLTKSAH 241
              CQ  K+   +  G LQP+      WES+S DFIT LP++  GY  ++VVVDR +K A 
Sbjct: 980  HTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAI 1039

Query: 242  FVPGKSTYTASKWGQLYMSEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRVDFSTT 301
             VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  
Sbjct: 1040 LVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLP 1099

Query: 302  FHPQTDGQIERLNQILEDMLRAYVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 361
            + PQTDGQ ER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++ 
Sbjct: 1100 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1159

Query: 362  -KCCRSPICWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYVDVRHKDL-EFE 421
                 SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+
Sbjct: 1160 YSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQ 1219

Query: 422  VGDMVFLKVAPVKGVLRFEKKGKLSPRFVGPFEIQERIGPVAYRL 458
             GD+V +K     G L   K  KL+P F GPF + ++ GP  Y L
Sbjct: 1220 PGDLVMVKRTKT-GFL--HKSNKLAPSFAGPFYVLQKSGPNNYEL 1235

[Close]

BLAST of Cmc10g0275401 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.9e-56
Identity = 139/465 (29.89%), Postives = 231/465 (49.68%), Query Frame = 0


Query: 2    RQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSV 61
            R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSI---- 859

Query: 62   GEVTSQLAQLSVQPTLRQRIIVAQLNDPYLV-----EKRRLVETGQGEDFSISSDDGLMF 121
                + + Q+S+    + +++    ND  L+     E +R+ E       +I   DGL+ 
Sbjct: 860  ----NFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEE-------NIQLKDGLLI 919

Query: 122  EGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSMKMYQDLRSAYWWRNMKREVADFVSRC 181
              +  + +P D+ +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C
Sbjct: 920  NSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNC 979

Query: 182  LVCQQVKAPRQRSAGLLQPLSVPGWKWESVSTDFITELPKTLKGYTVIWVVVDRLTKSAH 241
              CQ  K+   +  G LQP+      WES+S DFIT LP++  GY  ++VVVDR +K A 
Sbjct: 980  HTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAI 1039

Query: 242  FVPGKSTYTASKWGQLYMSEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRVDFSTT 301
             VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  
Sbjct: 1040 LVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLP 1099

Query: 302  FHPQTDGQIERLNQILEDMLRAYVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 361
            + PQTDGQ ER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++ 
Sbjct: 1100 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1159

Query: 362  -KCCRSPICWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYVDVRHKDL-EFE 421
                 SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+
Sbjct: 1160 YSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQ 1219

Query: 422  VGDMVFLKVAPVKGVLRFEKKGKLSPRFVGPFEIQERIGPVAYRL 458
             GD+V +K     G L   K  KL+P F GPF + ++ GP  Y L
Sbjct: 1220 PGDLVMVKRTKT-GFL--HKSNKLAPSFAGPFYVLQKSGPNNYEL 1235

[Close]

BLAST of Cmc10g0275401 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.9e-56
Identity = 139/465 (29.89%), Postives = 231/465 (49.68%), Query Frame = 0


Query: 2    RQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSV 61
            R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSI---- 859

Query: 62   GEVTSQLAQLSVQPTLRQRIIVAQLNDPYLV-----EKRRLVETGQGEDFSISSDDGLMF 121
                + + Q+S+    + +++    ND  L+     E +R+ E       +I   DGL+ 
Sbjct: 860  ----NFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEE-------NIQLKDGLLI 919

Query: 122  EGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSMKMYQDLRSAYWWRNMKREVADFVSRC 181
              +  + +P D+ +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C
Sbjct: 920  NSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNC 979

Query: 182  LVCQQVKAPRQRSAGLLQPLSVPGWKWESVSTDFITELPKTLKGYTVIWVVVDRLTKSAH 241
              CQ  K+   +  G LQP+      WES+S DFIT LP++  GY  ++VVVDR +K A 
Sbjct: 980  HTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAI 1039

Query: 242  FVPGKSTYTASKWGQLYMSEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRVDFSTT 301
             VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  
Sbjct: 1040 LVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLP 1099

Query: 302  FHPQTDGQIERLNQILEDMLRAYVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 361
            + PQTDGQ ER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++ 
Sbjct: 1100 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1159

Query: 362  -KCCRSPICWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYVDVRHKDL-EFE 421
                 SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+
Sbjct: 1160 YSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQ 1219

Query: 422  VGDMVFLKVAPVKGVLRFEKKGKLSPRFVGPFEIQERIGPVAYRL 458
             GD+V +K     G L   K  KL+P F GPF + ++ GP  Y L
Sbjct: 1220 PGDLVMVKRTKT-GFL--HKSNKLAPSFAGPFYVLQKSGPNNYEL 1235

[Close]

BLAST of Cmc10g0275401 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.9e-56
Identity = 139/465 (29.89%), Postives = 231/465 (49.68%), Query Frame = 0


Query: 2    RQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSV 61
            R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I    
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSI---- 859

Query: 62   GEVTSQLAQLSVQPTLRQRIIVAQLNDPYLV-----EKRRLVETGQGEDFSISSDDGLMF 121
                + + Q+S+    + +++    ND  L+     E +R+ E       +I   DGL+ 
Sbjct: 860  ----NFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEE-------NIQLKDGLLI 919

Query: 122  EGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSMKMYQDLRSAYWWRNMKREVADFVSRC 181
              +  + +P D+ +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C
Sbjct: 920  NSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNC 979

Query: 182  LVCQQVKAPRQRSAGLLQPLSVPGWKWESVSTDFITELPKTLKGYTVIWVVVDRLTKSAH 241
              CQ  K+   +  G LQP+      WES+S DFIT LP++  GY  ++VVVDR +K A 
Sbjct: 980  HTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAI 1039

Query: 242  FVPGKSTYTASKWGQLYMSEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRVDFSTT 301
             VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  
Sbjct: 1040 LVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLP 1099

Query: 302  FHPQTDGQIERLNQILEDMLRAYVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 361
            + PQTDGQ ER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++ 
Sbjct: 1100 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1159

Query: 362  -KCCRSPICWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYVDVRHKDL-EFE 421
                 SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+
Sbjct: 1160 YSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQ 1219

Query: 422  VGDMVFLKVAPVKGVLRFEKKGKLSPRFVGPFEIQERIGPVAYRL 458
             GD+V +K     G L   K  KL+P F GPF + ++ GP  Y L
Sbjct: 1220 PGDLVMVKRTKT-GFL--HKSNKLAPSFAGPFYVLQKSGPNNYEL 1235

[Close]

BLAST of Cmc10g0275401 vs. ExPASy TrEMBL
Match: A0A5A7TBV4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001380 PE=4 SV=1)

HSP 1 Score: 877.9 bits (2267), Expect = 1.9e-251
Identity = 431/457 (94.31%), Postives = 439/457 (96.06%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60
           MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS
Sbjct: 257 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 316

Query: 61  VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRL 120
           VGEVT+QLAQLSVQPTLRQ+II AQLNDPYL EKRR+VETGQGEDFSISSDDGLMFEGRL
Sbjct: 317 VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 376

Query: 121 CVPEDSAVKTELLTEAHSSPFTMHPGSMKMYQDLRSAYWWRNMKREVADFVSRCLVCQQV 180
           CVPEDSAVKTELLTEAHSSPFTMHPGS KMYQDLRS YWWR MKREVADFVSRCLVCQQV
Sbjct: 377 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 436

Query: 181 KAPRQRSAGLLQPLSVPGWKWESVSTDFITELPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240
           KAPRQ  AGLLQPLSVPGWKWESVS DFIT LPKTLKG+TVIWVVVDRLTKSAHFVPGKS
Sbjct: 437 KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGHTVIWVVVDRLTKSAHFVPGKS 496

Query: 241 TYTASKWGQLYMSEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRVDFSTTFHPQTD 300
           TYTASKWGQLYM+EIVRLHGVPVSIISDRD RFTSKFWKGLQLALGTR+DFST FHPQTD
Sbjct: 497 TYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD 556

Query: 301 GQIERLNQILEDMLRAYVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360
           GQ ERLNQILEDMLRA VLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP
Sbjct: 557 GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 616

Query: 361 ICWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYVDVRHKDLEFEVGDMVFLK 420
           +CWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSY DVR KDLEFEVGDMVFLK
Sbjct: 617 VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLK 676

Query: 421 VAPVKGVLRFEKKGKLSPRFVGPFEIQERIGPVAYRL 458
           VAP+KGVLRF KKGKLSPRFVG FEI ERIGPVAYRL
Sbjct: 677 VAPMKGVLRFAKKGKLSPRFVGSFEILERIGPVAYRL 713

[Close]

BLAST of Cmc10g0275401 vs. ExPASy TrEMBL
Match: A0A5A7V4E4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00400 PE=4 SV=1)

HSP 1 Score: 875.2 bits (2260), Expect = 1.3e-250
Identity = 432/457 (94.53%), Postives = 439/457 (96.06%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60
            MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS
Sbjct: 941  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 1000

Query: 61   VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRL 120
            VGEVT+QLAQLSVQPTLRQ+II AQLNDPYL EKRR+VETGQGEDFSIS DDGLMFEGRL
Sbjct: 1001 VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISFDDGLMFEGRL 1060

Query: 121  CVPEDSAVKTELLTEAHSSPFTMHPGSMKMYQDLRSAYWWRNMKREVADFVSRCLVCQQV 180
            CVPEDSAVKTELLTEAHSS FTMHPGS KMYQDLRS YWWR MKREVADFVSRCLVCQQV
Sbjct: 1061 CVPEDSAVKTELLTEAHSSLFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 1120

Query: 181  KAPRQRSAGLLQPLSVPGWKWESVSTDFITELPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240
            KAPRQ  AGLLQPLSVPGWKWESVS DFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1121 KAPRQCPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 1180

Query: 241  TYTASKWGQLYMSEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRVDFSTTFHPQTD 300
            TYTASKWGQLYM+EIVRLHGVPVSIISDRD RFTSKFWKGLQLALGTR+DFSTTFHPQTD
Sbjct: 1181 TYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTTFHPQTD 1240

Query: 301  GQIERLNQILEDMLRAYVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360
            GQIERLNQILEDMLRA VLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP
Sbjct: 1241 GQIERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 1300

Query: 361  ICWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYVDVRHKDLEFEVGDMVFLK 420
            +CWGEVGEQRMLG ELVQTTNAAIQKIRARMLTAQSRQKSY DVR KDLEFEVGDMVFLK
Sbjct: 1301 VCWGEVGEQRMLGLELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLK 1360

Query: 421  VAPVKGVLRFEKKGKLSPRFVGPFEIQERIGPVAYRL 458
            VAP+KGVLRF KKGKLSPRFVGPFEI ERIGPVAYRL
Sbjct: 1361 VAPMKGVLRFVKKGKLSPRFVGPFEILERIGPVAYRL 1397

[Close]

BLAST of Cmc10g0275401 vs. ExPASy TrEMBL
Match: A0A5A7TDX1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G00780 PE=4 SV=1)

HSP 1 Score: 874.8 bits (2259), Expect = 1.6e-250
Identity = 432/457 (94.53%), Postives = 439/457 (96.06%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60
            MR RRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQ PLLRDFERAEIAVS
Sbjct: 729  MRHRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDFERAEIAVS 788

Query: 61   VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRL 120
            VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSIS DDGLMFEGRL
Sbjct: 789  VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISFDDGLMFEGRL 848

Query: 121  CVPEDSAVKTELLTEAHSSPFTMHPGSMKMYQDLRSAYWWRNMKREVADFVSRCLVCQQV 180
            CVPEDSAVKTELLTEAHSSPFTMHPGS KMYQDLRS YWWRNMKREVADFVSRCLVCQQV
Sbjct: 849  CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 908

Query: 181  KAPRQRSAGLLQPLSVPGWKWESVSTDFITELPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240
            KAPRQR AGLLQPLSVPGWKWESVS DFIT LPKTLKGYTVIWVVVDRLTKSAHFV GKS
Sbjct: 909  KAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVSGKS 968

Query: 241  TYTASKWGQLYMSEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRVDFSTTFHPQTD 300
            TYTASKWGQLYM+EIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTR+DFST FHPQTD
Sbjct: 969  TYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTD 1028

Query: 301  GQIERLNQILEDMLRAYVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360
            G+ +RLNQILEDMLRA VLEFSGSWDSHLHLMEFAYNNSYQATIGMA FEALYGKCCRSP
Sbjct: 1029 GRTKRLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMALFEALYGKCCRSP 1088

Query: 361  ICWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYVDVRHKDLEFEVGDMVFLK 420
            +CWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS+QKSY DVR KDLEFEVGDMVFLK
Sbjct: 1089 VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSKQKSYADVRRKDLEFEVGDMVFLK 1148

Query: 421  VAPVKGVLRFEKKGKLSPRFVGPFEIQERIGPVAYRL 458
            VAP+KGVLRFE KGKLSPRFVGPFEI ERIGPVAY L
Sbjct: 1149 VAPMKGVLRFEMKGKLSPRFVGPFEILERIGPVAYCL 1185

[Close]

BLAST of Cmc10g0275401 vs. ExPASy TrEMBL
Match: A0A5A7TVN9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00750 PE=4 SV=1)

HSP 1 Score: 874.8 bits (2259), Expect = 1.6e-250
Identity = 429/457 (93.87%), Postives = 438/457 (95.84%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60
           MRQRRWLELVKDYDCEILYHPGKANVVAD+LSRKVAHSAALITKQTPLLRDFERAEIAVS
Sbjct: 507 MRQRRWLELVKDYDCEILYHPGKANVVADSLSRKVAHSAALITKQTPLLRDFERAEIAVS 566

Query: 61  VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRL 120
           VGEVT+QLAQLSVQPTLRQ+II AQLNDPYL EKRR+VETGQGEDFSISSDDGLMFEGRL
Sbjct: 567 VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 626

Query: 121 CVPEDSAVKTELLTEAHSSPFTMHPGSMKMYQDLRSAYWWRNMKREVADFVSRCLVCQQV 180
           CVPEDSAVKTELLTEAHSSPFTMHPGS KMYQDLRS YWWR MKREVADFVSRCLVCQQV
Sbjct: 627 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 686

Query: 181 KAPRQRSAGLLQPLSVPGWKWESVSTDFITELPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240
           KAPRQ  AGLLQPLSVPGWKWESVS DFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKS
Sbjct: 687 KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 746

Query: 241 TYTASKWGQLYMSEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRVDFSTTFHPQTD 300
           TYTASKWGQLY++EIVRLHGVPVSIISDRD RFTSKFWKGLQLAL TR+DFST FHPQTD
Sbjct: 747 TYTASKWGQLYVTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALCTRLDFSTAFHPQTD 806

Query: 301 GQIERLNQILEDMLRAYVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360
           GQ ERLNQILEDMLRA VLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP
Sbjct: 807 GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 866

Query: 361 ICWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYVDVRHKDLEFEVGDMVFLK 420
           +CWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSY DVR KDLEFEVGDMVFLK
Sbjct: 867 VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLK 926

Query: 421 VAPVKGVLRFEKKGKLSPRFVGPFEIQERIGPVAYRL 458
           V P+KGVLRF KKGKLSPRFVGPFEI ERIGPVAYRL
Sbjct: 927 VPPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRL 963

[Close]

BLAST of Cmc10g0275401 vs. ExPASy TrEMBL
Match: A0A5A7SSL3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold465G00540 PE=4 SV=1)

HSP 1 Score: 872.5 bits (2253), Expect = 8.1e-250
Identity = 427/457 (93.44%), Postives = 438/457 (95.84%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 60
            MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS
Sbjct: 941  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 1000

Query: 61   VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRL 120
            VGEVT+QLAQLSVQPTLRQ+II AQ NDPYL EKRR+VETGQGEDFSIS+DDGLMFEGRL
Sbjct: 1001 VGEVTAQLAQLSVQPTLRQKIIAAQWNDPYLAEKRRMVETGQGEDFSISADDGLMFEGRL 1060

Query: 121  CVPEDSAVKTELLTEAHSSPFTMHPGSMKMYQDLRSAYWWRNMKREVADFVSRCLVCQQV 180
            CVPED+AVKTELLTEAHSSPFTMHPGS KMYQDLRS YWWR MKREVADFVSRCLVCQQV
Sbjct: 1061 CVPEDTAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 1120

Query: 181  KAPRQRSAGLLQPLSVPGWKWESVSTDFITELPKTLKGYTVIWVVVDRLTKSAHFVPGKS 240
            K+PRQ  AGL+Q LSVPGWKWESVS DFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKS
Sbjct: 1121 KSPRQHPAGLMQLLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKS 1180

Query: 241  TYTASKWGQLYMSEIVRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRVDFSTTFHPQTD 300
            TYTASKWGQLYM+EIVRLHGVPVSIISDRD RFTSKFWKGLQLALGTR+DFST FHPQTD
Sbjct: 1181 TYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTD 1240

Query: 301  GQIERLNQILEDMLRAYVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 360
            GQ ERLNQILEDMLRA VLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP
Sbjct: 1241 GQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 1300

Query: 361  ICWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYVDVRHKDLEFEVGDMVFLK 420
            +CWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSY DVR KDLEFEVGDMVFLK
Sbjct: 1301 VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLK 1360

Query: 421  VAPVKGVLRFEKKGKLSPRFVGPFEIQERIGPVAYRL 458
            VAP+KGVLRF KKGKLSPRFVGPFEI ERIGPVAYRL
Sbjct: 1361 VAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRL 1397

The following BLAST results are available for this feature:

BLAST of Cmc10g0275401 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0040942.1	4.0e-251	94.31	pol protein [Cucumis melo var. makuwa]	[more]
KAA0060745.1	2.6e-250	94.53	pol protein [Cucumis melo var. makuwa]	[more]
KAA0041490.1	3.4e-250	94.53	hypothetical protein E6C27_scaffold6G00780 [Cucumis melo var. makuwa]	[more]
KAA0045309.1	3.4e-250	93.87	pol protein [Cucumis melo var. makuwa]	[more]
KAA0032541.1	1.7e-249	93.44	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc10g0275401 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	5.9e-56	29.89	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	5.9e-56	29.89	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	5.9e-56	29.89	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	5.9e-56	29.89	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	5.9e-56	29.89	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc10g0275401 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TBV4	1.9e-251	94.31	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001380 P...	[more]
A0A5A7V4E4	1.3e-250	94.53	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72...	[more]
A0A5A7TDX1	1.6e-250	94.53	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G...	[more]
A0A5A7TVN9	1.6e-250	93.87	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold31...	[more]
A0A5A7SSL3	8.1e-250	93.44	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46...	[more]

BLAST of Cmc10g0275401 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 90..181 e-value: 1.2E-17 score: 65.9
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 119..350
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 126..182 e-value: 1.8E-16 score: 59.9
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 191..396 e-value: 1.1E-44 score: 154.1
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 193..356 score: 19.721321
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 194..353

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0275401.1	Cmc10g0275401.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008194	UDP-glycosyltransferase activity
molecular_function	GO:0008270	zinc ion binding