Cmc10g0275251 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCATCGGTTGCTATTGCTCCTCTGTAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAACTCCAATCGATGGTTATTATGGTCGCCGGTTGTCATTTGTCCTCTACAAGTTTCTCTATCTCTTTCTCTCTCTAAACTCCAGTTTCAGCCGTTGTTACCATTGTACGAGGATTTAACATAATAGATGATTTTGTATAGAAGTATATAAAGAGTGTTTTAAAGAAGAAGAAAAAGGGTAACATGAAGGATCTAGAGAAAGAGACGGAAGTTGAGGTTATGATAGCATTATTGGTTGGATTCCCGATTGATGACCTGCTTGAGGAAGATATTAAAGCTAGGTGA ATGGTCATCGGTTGCTATTGCTCCTCTTATATAAAGAGTGTTTTAAAGAAGAAGAAAAAGGGTAACATGAAGGATCTAGAGAAAGAGACGGAAGTTGAGGTTATGATAGCATTATTGGTTGGATTCCCGATTGATGACCTGCTTGAGGAAGATATTAAAGCTAGGTGA ATGGTCATCGGTTGCTATTGCTCCTCTTATATAAAGAGTGTTTTAAAGAAGAAGAAAAAGGGTAACATGAAGGATCTAGAGAAAGAGACGGAAGTTGAGGTTATGATAGCATTATTGGTTGGATTCCCGATTGATGACCTGCTTGAGGAAGATATTAAAGCTAGGTGA MVIGCYCSSYIKSVLKKKKKGNMKDLEKETEVEVMIALLVGFPIDDLLEEDIKAR Homology
BLAST of Cmc10g0275251 vs. NCBI nr
Match: KAA0036809.1 (lysine-specific histone demethylase 1-like protein 2 isoform X1 [Cucumis melo var. makuwa] >TYJ95877.1 lysine-specific histone demethylase 1-like protein 2 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 60.8 bits (146), Expect = 4.1e-06 Identity = 33/50 (66.00%), Postives = 38/50 (76.00%), Query Frame = 0
BLAST of Cmc10g0275251 vs. NCBI nr
Match: XP_008454649.1 (PREDICTED: lysine-specific histone demethylase 1 homolog 2 isoform X1 [Cucumis melo] >XP_008454650.1 PREDICTED: lysine-specific histone demethylase 1 homolog 2 isoform X1 [Cucumis melo]) HSP 1 Score: 60.8 bits (146), Expect = 4.1e-06 Identity = 33/50 (66.00%), Postives = 38/50 (76.00%), Query Frame = 0
BLAST of Cmc10g0275251 vs. NCBI nr
Match: XP_004150111.2 (lysine-specific histone demethylase 1 homolog 2 [Cucumis sativus] >XP_011652386.1 lysine-specific histone demethylase 1 homolog 2 [Cucumis sativus]) HSP 1 Score: 60.8 bits (146), Expect = 4.1e-06 Identity = 33/50 (66.00%), Postives = 38/50 (76.00%), Query Frame = 0
BLAST of Cmc10g0275251 vs. NCBI nr
Match: XP_022941324.1 (lysine-specific histone demethylase 1 homolog 2-like isoform X3 [Cucurbita moschata]) HSP 1 Score: 59.3 bits (142), Expect = 1.2e-05 Identity = 30/41 (73.17%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of Cmc10g0275251 vs. NCBI nr
Match: XP_022941323.1 (lysine-specific histone demethylase 1 homolog 2-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 59.3 bits (142), Expect = 1.2e-05 Identity = 30/41 (73.17%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of Cmc10g0275251 vs. ExPASy Swiss-Prot
Match: Q9LID0 (Lysine-specific histone demethylase 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=LDL2 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 1.5e-06 Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0
BLAST of Cmc10g0275251 vs. ExPASy TrEMBL
Match: A0A1S3BYN9 (lysine-specific histone demethylase 1 homolog 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495004 PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.0e-06 Identity = 33/50 (66.00%), Postives = 38/50 (76.00%), Query Frame = 0
BLAST of Cmc10g0275251 vs. ExPASy TrEMBL
Match: A0A5D3B9S1 (Lysine-specific histone demethylase 1-like protein 2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001720 PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.0e-06 Identity = 33/50 (66.00%), Postives = 38/50 (76.00%), Query Frame = 0
BLAST of Cmc10g0275251 vs. ExPASy TrEMBL
Match: A0A0A0LFX3 (SWIRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G851830 PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.0e-06 Identity = 33/50 (66.00%), Postives = 38/50 (76.00%), Query Frame = 0
BLAST of Cmc10g0275251 vs. ExPASy TrEMBL
Match: A0A6J1IZB6 (lysine-specific histone demethylase 1 homolog 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480517 PE=3 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 5.8e-06 Identity = 30/41 (73.17%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of Cmc10g0275251 vs. ExPASy TrEMBL
Match: A0A6J1J1P3 (lysine-specific histone demethylase 1 homolog 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480517 PE=3 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 5.8e-06 Identity = 30/41 (73.17%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of Cmc10g0275251 vs. TAIR 10
Match: AT3G13682.1 (LSD1-like2 ) HSP 1 Score: 52.8 bits (125), Expect = 1.0e-07 Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|