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Cmc10g0275211 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGCTAGTAAATTACTCAACCAGGGTACTTGGGGCATCTTGGCAAGCGTGGTAGATACCCGAGAACCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGGGAGTACCCTGATGTCTTCCCCGATGAGCTTCCAGGACTTCCGCCTCCTAGGGAGATAGACTTCGCCATTGAATTAGAACCAGGCACTGCTCCTATCTCGAGAGCCCCTTACATAATGGCTCCAGCCGAGCTAAAAGAGCTGAAGGTCCAGTTGCAGGAGTTGCTGGACAAGGGTTTCATCCGGCCCAGTGTGTCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGATTACCGAGAGCTGAACAAGGTGACAGTTAAAAACTGCTACCCGTTGCCTAGGATTGATGACTTGTTCGATCAGTTGTAG ATGAAGGCTAGTAAATTACTCAACCAGGGTACTTGGGGCATCTTGGCAAGCGTGGTAGATACCCGAGAACCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGGGAGTACCCTGATGTCTTCCCCGATGAGCTTCCAGGACTTCCGCCTCCTAGGGAGATAGACTTCGCCATTGAATTAGAACCAGGCACTGCTCCTATCTCGAGAGCCCCTTACATAATGGCTCCAGCCGAGCTAAAAGAGCTGAAGGTCCAGTTGCAGGAGTTGCTGGACAAGGGTTTCATCCGGCCCAGTGTGTCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGATTACCGAGAGCTGAACAAGGTGACAGTTAAAAACTGCTACCCGTTGCCTAGGATTGATGACTTGTTCGATCAGTTGTAG ATGAAGGCTAGTAAATTACTCAACCAGGGTACTTGGGGCATCTTGGCAAGCGTGGTAGATACCCGAGAACCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGGGAGTACCCTGATGTCTTCCCCGATGAGCTTCCAGGACTTCCGCCTCCTAGGGAGATAGACTTCGCCATTGAATTAGAACCAGGCACTGCTCCTATCTCGAGAGCCCCTTACATAATGGCTCCAGCCGAGCTAAAAGAGCTGAAGGTCCAGTTGCAGGAGTTGCTGGACAAGGGTTTCATCCGGCCCAGTGTGTCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGATTACCGAGAGCTGAACAAGGTGACAGTTAAAAACTGCTACCCGTTGCCTAGGATTGATGACTTGTTCGATCAGTTGTAG MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPGLPPPREIDFAIELEPGTAPISRAPYIMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNCYPLPRIDDLFDQL Homology
BLAST of Cmc10g0275211 vs. NCBI nr
Match: KAA0033486.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 292.0 bits (746), Expect = 2.9e-75 Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of Cmc10g0275211 vs. NCBI nr
Match: KAA0040693.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 292.0 bits (746), Expect = 2.9e-75 Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of Cmc10g0275211 vs. NCBI nr
Match: KAA0031437.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 287.7 bits (735), Expect = 5.5e-74 Identity = 141/146 (96.58%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of Cmc10g0275211 vs. NCBI nr
Match: KAA0033825.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 287.7 bits (735), Expect = 5.5e-74 Identity = 141/146 (96.58%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of Cmc10g0275211 vs. NCBI nr
Match: KAA0025848.1 (pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo var. makuwa] >KAA0036593.1 pol protein [Cucumis melo var. makuwa] >KAA0036739.1 pol protein [Cucumis melo var. makuwa] >KAA0037408.1 pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 287.7 bits (735), Expect = 5.5e-74 Identity = 141/146 (96.58%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of Cmc10g0275211 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3) HSP 1 Score: 92.8 bits (229), Expect = 3.4e-18 Identity = 55/159 (34.59%), Postives = 87/159 (54.72%), Query Frame = 0
BLAST of Cmc10g0275211 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2) HSP 1 Score: 92.8 bits (229), Expect = 3.4e-18 Identity = 55/159 (34.59%), Postives = 87/159 (54.72%), Query Frame = 0
BLAST of Cmc10g0275211 vs. ExPASy Swiss-Prot
Match: P10394 (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 3.6e-12 Identity = 42/132 (31.82%), Postives = 69/132 (52.27%), Query Frame = 0
BLAST of Cmc10g0275211 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10 Identity = 38/127 (29.92%), Postives = 69/127 (54.33%), Query Frame = 0
BLAST of Cmc10g0275211 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10 Identity = 38/127 (29.92%), Postives = 69/127 (54.33%), Query Frame = 0
BLAST of Cmc10g0275211 vs. ExPASy TrEMBL
Match: A0A5A7SU25 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold261G00200 PE=4 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 1.4e-75 Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of Cmc10g0275211 vs. ExPASy TrEMBL
Match: A0A5A7TC72 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold529G00070 PE=4 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 1.4e-75 Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of Cmc10g0275211 vs. ExPASy TrEMBL
Match: A0A5D3CQB5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001420 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 2.7e-74 Identity = 141/146 (96.58%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of Cmc10g0275211 vs. ExPASy TrEMBL
Match: A0A5A7UBS1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G00110 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 2.7e-74 Identity = 141/146 (96.58%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of Cmc10g0275211 vs. ExPASy TrEMBL
Match: A0A5A7TEQ2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00410 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 2.7e-74 Identity = 141/146 (96.58%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of Cmc10g0275211 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein ) HSP 1 Score: 41.2 bits (95), Expect = 8.4e-04 Identity = 18/33 (54.55%), Postives = 25/33 (75.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
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