Cmc10g0273411 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0273411
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionEnvelope-like
LocationCMiso1.1chr10: 6916105 .. 6917166 (+)
RNA-Seq ExpressionCmc10g0273411
SyntenyCmc10g0273411
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGCGTAAAGGCATAAAATTGGTCTTTACAATTGATGTCCTTCAATGCATGCTTCGAGTGTGTCTCCTACTTTTTGGCAGTTGGTTTGTATGATTGGTATTGTTGAGATTGTTGATTTTGGTTCTTTTGTTATATCTCAATTACTTCACTATGTGGATTCTTATGCTCTCAAACTCCCAATTGGTTTTCCATGTTTGTTGTATGCTATTATGATGTCTCAACATCCTACAATTCTATCCGTTGGAGAACAAGCTCCCAGTTCTTCTCTTAAAATGCACTACATCTCAACTACATATTGTTCCAAGGGAATCATGTCCCTAACATCACTCATCACATTAGACCTCCTCGTGCTGATGACTTGCCTCTTTCGACTGATCTTCGTCTCCCTGATGGTGGGTTACTTTATTCCTCCTTTATTCGGGAATAGAATTTTCCGTATTCTATCAAATGAATTCTGAACTTTGAGTGAAATTATTCAAGAGCTCATTGACGATCTTCATCGTACCATTGATTCTCTTGTGCACACTCTCATCTTGATCTTGCCCAGTTCTGGTAATGCTTCGACATCCATCGTTAATCTATCCAATTCTAGGTTTTCTTTTTTGGCCATCAAGGGTCGAGAGATGTGTTTGAACTGCTGGGGTATGTGTTTTGTTGCTGCTGCTGCTCGTATGTGCTTGGCCATAAAAGATATTTTGTATCAGCTAAAGGGGTAGTTTGTTAATGTTTTTAGTTGGTTGGAAAAATATTCTTTTATTACTTTTTTTTTTATGGTTACGTTGTTGCCTTGTTAAAAACTTTCATTTTTGCTTTGGTCATGTTGGTGTGGGTGTCTTAATAGCCAAATGATTATCTTTCCTTGTTGAGAATGTCTCTGTTATTGGGCTATGTTTTTTTCTTTGGATGTAACGTAGAAAAGGTTTTGACTTAATAAGTGTGTTGCAGTTGAATGTTTCTTGTGTTTGTGAAAGAAACTTCTGTATTGTGAAGAAAGATTGTTGCTTGTGTTCGTGATGGCTGTTGGCTCCTGACATGTTGTTTAACATTAATTGAGAAGTTGG

mRNA sequence

TTTGCGTAAAGGCATAAAATTGGTCTTTACAATTGATGTCCTTCAATGCATGCTTCGAGTGTGTCTCCTACTTTTTGGCAGTTGGTTTGTATGATTGGTATTGTTGAGATTGTTGATTTTGGTTCTTTTGTTATATCTCAATTACTTCACTATGTGGATTCTTATGCTCTCAAACTCCCAATTGGTTTTCCATGTTTGTTGTATGCTATTATGATGTCTCAACATCCTACAATTCTATCCGTTGGAGAACAAGCTCCCAGTTCTTCTCTTAAAATGCACTACATCTCAACTACATATTGTTCCAAGGGAATCATGTCCCTAACATCACTCATCACATTAGACCTCCTCGTGCTGATGACTTGCCTCTTTCGACTGATCTTCGTCTCCCTGATGGTGGGTTACTTTATTCCTCCTTTATTCGGGAATAGAATTTTCCGTATTCTATCAAATGAATTCTGAACTTTGAGTGAAATTATTCAAGAGCTCATTGACGATCTTCATCGTACCATTGATTCTCTTGTGCACACTCTCATCTTGATCTTGCCCAGTTCTGGTAATGCTTCGACATCCATCGTTAATCTATCCAATTCTAGGTTTTCTTTTTTGGCCATCAAGGGTCGAGAGATGTGTTTGAACTGCTGGGGTATGTGTTTTGTTGCTGCTGCTGCTCGTATGTGCTTGGCCATAAAAGATATTTTGTATCAGCTAAAGGGGTAGTTTGTTAATGTTTTTAGTTGGTTGGAAAAATATTCTTTTATTACTTTTTTTTTTATGGTTACGTTGTTGCCTTGTTAAAAACTTTCATTTTTGCTTTGGTCATGTTGGTGTGGGTGTCTTAATAGCCAAATGATTATCTTTCCTTGTTGAGAATGTCTCTGTTATTGGGCTATGTTTTTTTCTTTGGATGTAACGTAGAAAAGGTTTTGACTTAATAAGTGTGTTGCAGTTGAATGTTTCTTGTGTTTGTGAAAGAAACTTCTGTATTGTGAAGAAAGATTGTTGCTTGTGTTCGTGATGGCTGTTGGCTCCTGACATGTTGTTTAACATTAATTGAGAAGTTGG

Coding sequence (CDS)

ATGCATGCTTCGAGTGTGTCTCCTACTTTTTGGCAGTTGGTTTGTATGATTGGTATTGTTGAGATTGTTGATTTTGGTTCTTTTGTTATATCTCAATTACTTCACTATGTGGATTCTTATGCTCTCAAACTCCCAATTGGTTTTCCATGTTTGTTGTATGCTATTATGATGTCTCAACATCCTACAATTCTATCCGTTGGAGAACAAGCTCCCAGTTCTTCTCTTAAAATGCACTACATCTCAACTACATATTGTTCCAAGGGAATCATGTCCCTAACATCACTCATCACATTAGACCTCCTCGTGCTGATGACTTGCCTCTTTCGACTGATCTTCGTCTCCCTGATGGTGGGTTACTTTATTCCTCCTTTATTCGGGAATAGAATTTTCCGTATTCTATCAAATGAATTCTGA

Protein sequence

MHASSVSPTFWQLVCMIGIVEIVDFGSFVISQLLHYVDSYALKLPIGFPCLLYAIMMSQHPTILSVGEQAPSSSLKMHYISTTYCSKGIMSLTSLITLDLLVLMTCLFRLIFVSLMVGYFIPPLFGNRIFRILSNEF
Homology
[Close]
BLAST of Cmc10g0273411 vs. NCBI nr
Match: KAA0050342.1 (hypothetical protein E6C27_scaffold88G00710 [Cucumis melo var. makuwa] >TYK03556.1 hypothetical protein E5676_scaffold293G00530 [Cucumis melo var. makuwa])

HSP 1 Score: 102.1 bits (253), Expect = 4.0e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 1  MHASSVSPTFWQLVCMIGIVEIVDFGSFVISQLLHYVDSYALKLPIGFP 50
          MHASSVSPTFWQLVCMIGIVEIVDFGSFVISQLLHYVDSYALKLPIGFP
Sbjct: 1  MHASSVSPTFWQLVCMIGIVEIVDFGSFVISQLLHYVDSYALKLPIGFP 49

[Close]
BLAST of Cmc10g0273411 vs. NCBI nr
Match: KAA0059736.1 (envelope-like [Cucumis melo var. makuwa])

HSP 1 Score: 68.2 bits (165), Expect = 6.4e-08
Identity = 35/76 (46.05%), Postives = 56/76 (73.68%), Query Frame = 0 

Query: 2   HASSVSPTFWQLVCMIGIVEIVDFGSFVISQLLHYVDSYALKLPIGFPCLLYAIMMSQHP 61
           +ASSVS  F +L+ +IGI  + D   FV +QLL ++++++LK+ I FP LL  IM+SQHP
Sbjct: 294 YASSVSLAFAKLIYLIGIGSVTDVAQFVFNQLLLHIETFSLKISISFPHLLCIIMLSQHP 353

Query: 62  TILSVGEQAPSSSLKM 78
           +IL+  + AP+S+L++
Sbjct: 354 SILT-DQDAPNSTLRL 368

[Close]
BLAST of Cmc10g0273411 vs. NCBI nr
Match: MCI17979.1 (envelope-like protein [Trifolium medium])

HSP 1 Score: 68.2 bits (165), Expect = 6.4e-08
Identity = 28/68 (41.18%), Postives = 49/68 (72.06%), Query Frame = 0 

Query: 2  HASSVSPTFWQLVCMIGIVEIVDFGSFVISQLLHYVDSYALKLPIGFPCLLYAIMMSQHP 61
          H S ++P   +++ +IG    ++FG +V ++++ + +SYA+KLPI FPCL+ +I++SQHP
Sbjct: 11 HGSGITPMLAKIIYLIGTKRNLNFGEYVFTKIMKHAESYAVKLPIAFPCLISSIILSQHP 70

Query: 62 TILSVGEQ 70
           IL  GE+
Sbjct: 71 DILHPGEK 78

[Close]
BLAST of Cmc10g0273411 vs. NCBI nr
Match: MCH83130.1 (envelope-like protein [Trifolium medium])

HSP 1 Score: 58.9 bits (141), Expect = 3.9e-05
Identity = 26/67 (38.81%), Postives = 45/67 (67.16%), Query Frame = 0 

Query: 2   HASSVSPTFWQLVCMIGIVEIVDFGSFVISQLLHYVDSYALKLPIGFPCLLYAIMMSQHP 61
           H S ++P+  +L+ +IG    ++FG +V +  + + +SYA+KLPI FP L+  I++SQHP
Sbjct: 461 HGSGITPSLAKLIYLIGTKGKLNFGEYVFNLTMKHAESYAIKLPIAFPSLISEIILSQHP 520

Query: 62  TILSVGE 69
            I+ + E
Sbjct: 521 DIIRLCE 527

[Close]
BLAST of Cmc10g0273411 vs. NCBI nr
Match: MCH93110.1 (envelope-like protein [Trifolium medium])

HSP 1 Score: 58.2 bits (139), Expect = 6.7e-05
Identity = 26/67 (38.81%), Postives = 44/67 (65.67%), Query Frame = 0 

Query: 2  HASSVSPTFWQLVCMIGIVEIVDFGSFVISQLLHYVDSYALKLPIGFPCLLYAIMMSQHP 61
          H S ++P   +L+ +I     ++FG  V +  + + +++A+KLPI FPCL+ +I++SQHP
Sbjct: 15 HGSGITPQLAKLIYLIETKGKLNFGEHVFNLTMKHANTFAVKLPIAFPCLITSIILSQHP 74

Query: 62 TILSVGE 69
           IL  GE
Sbjct: 75 EILQPGE 81

[Close]
BLAST of Cmc10g0273411 vs. ExPASy TrEMBL
Match: A0A5D3BZD9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00530 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.9e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 1  MHASSVSPTFWQLVCMIGIVEIVDFGSFVISQLLHYVDSYALKLPIGFP 50
          MHASSVSPTFWQLVCMIGIVEIVDFGSFVISQLLHYVDSYALKLPIGFP
Sbjct: 1  MHASSVSPTFWQLVCMIGIVEIVDFGSFVISQLLHYVDSYALKLPIGFP 49

[Close]
BLAST of Cmc10g0273411 vs. ExPASy TrEMBL
Match: A0A392Q2B1 (Envelope-like protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 3.1e-08
Identity = 28/68 (41.18%), Postives = 49/68 (72.06%), Query Frame = 0 

Query: 2  HASSVSPTFWQLVCMIGIVEIVDFGSFVISQLLHYVDSYALKLPIGFPCLLYAIMMSQHP 61
          H S ++P   +++ +IG    ++FG +V ++++ + +SYA+KLPI FPCL+ +I++SQHP
Sbjct: 11 HGSGITPMLAKIIYLIGTKRNLNFGEYVFTKIMKHAESYAVKLPIAFPCLISSIILSQHP 70

Query: 62 TILSVGEQ 70
           IL  GE+
Sbjct: 71 DILHPGEK 78

[Close]
BLAST of Cmc10g0273411 vs. ExPASy TrEMBL
Match: A0A5A7UZV4 (Envelope-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold551G00140 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 3.1e-08
Identity = 35/76 (46.05%), Postives = 56/76 (73.68%), Query Frame = 0 

Query: 2   HASSVSPTFWQLVCMIGIVEIVDFGSFVISQLLHYVDSYALKLPIGFPCLLYAIMMSQHP 61
           +ASSVS  F +L+ +IGI  + D   FV +QLL ++++++LK+ I FP LL  IM+SQHP
Sbjct: 294 YASSVSLAFAKLIYLIGIGSVTDVAQFVFNQLLLHIETFSLKISISFPHLLCIIMLSQHP 353

Query: 62  TILSVGEQAPSSSLKM 78
           +IL+  + AP+S+L++
Sbjct: 354 SILT-DQDAPNSTLRL 368

[Close]
BLAST of Cmc10g0273411 vs. ExPASy TrEMBL
Match: A0A392M6R9 (Envelope-like protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0003945 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.9e-05
Identity = 26/67 (38.81%), Postives = 45/67 (67.16%), Query Frame = 0 

Query: 2   HASSVSPTFWQLVCMIGIVEIVDFGSFVISQLLHYVDSYALKLPIGFPCLLYAIMMSQHP 61
           H S ++P+  +L+ +IG    ++FG +V +  + + +SYA+KLPI FP L+  I++SQHP
Sbjct: 461 HGSGITPSLAKLIYLIGTKGKLNFGEYVFNLTMKHAESYAIKLPIAFPSLISEIILSQHP 520

Query: 62  TILSVGE 69
            I+ + E
Sbjct: 521 DIIRLCE 527

[Close]
BLAST of Cmc10g0273411 vs. ExPASy TrEMBL
Match: A0A392MZY3 (Envelope-like protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0014058 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.2e-05
Identity = 26/67 (38.81%), Postives = 44/67 (65.67%), Query Frame = 0 

Query: 2  HASSVSPTFWQLVCMIGIVEIVDFGSFVISQLLHYVDSYALKLPIGFPCLLYAIMMSQHP 61
          H S ++P   +L+ +I     ++FG  V +  + + +++A+KLPI FPCL+ +I++SQHP
Sbjct: 15 HGSGITPQLAKLIYLIETKGKLNFGEHVFNLTMKHANTFAVKLPIAFPCLITSIILSQHP 74

Query: 62 TILSVGE 69
           IL  GE
Sbjct: 75 EILQPGE 81

The following BLAST results are available for this feature:
BLAST of Cmc10g0273411 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0050342.14.0e-18100.00hypothetical protein E6C27_scaffold88G00710 [Cucumis melo var. makuwa] >TYK03556... [more]
KAA0059736.16.4e-0846.05envelope-like [Cucumis melo var. makuwa][more]
MCI17979.16.4e-0841.18envelope-like protein [Trifolium medium][more]
MCH83130.13.9e-0538.81envelope-like protein [Trifolium medium][more]
MCH93110.16.7e-0538.81envelope-like protein [Trifolium medium][more]
BLAST of Cmc10g0273411 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc10g0273411 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BZD91.9e-18100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A392Q2B13.1e-0841.18Envelope-like protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1[more]
A0A5A7UZV43.1e-0846.05Envelope-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold551G00140 ... [more]
A0A392M6R91.9e-0538.81Envelope-like protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0003945 P... [more]
A0A392MZY33.2e-0538.81Envelope-like protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0014058 P... [more]
BLAST of Cmc10g0273411 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0273411.1Cmc10g0273411.1mRNA