Cmc10g0272081 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0272081
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Nuclear transcription factor Y subunit B
Location	CMiso1.1chr10: 5576351 .. 5580711 (-)
RNA-Seq Expression	Cmc10g0272081
Synteny	Cmc10g0272081

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCTCCTCTTCCTCCTCCTCCTCCTCCTCTTTCTTCTCTTCTTCGGTACTTTTCTCTTCCACAATCCCTTTCAATTCCACTTCTTAGGGTTTTCATCCCATTCTTTTCCTCTTCCTTCCCTTCAGGTTCTTCTTCTCTCTTTCTCCTATGGCCGACCCTCCCACCAGTCCTCCTGGCGGCAGCCACGAAAGCGGCGGTGAACAAAGCCCTAACACTGCTGCTGCCGTTCGTGAACAAGATCGTTTCCTTCCCATCGCTAATATTAGTCGGATCATGAAGAAAGCTTTACCTGCTAATGGAAAGATCGCTAAAGACGCTAAAGATACTGTCCAGGAATGTGTTTCTGAATTCATTAGCTTCGTTACTAGCGAGTATGGTTTTGATCTGTTTTTTACTTTTTTCTTTTTTCTTTTTTCTTTTGTTCTTTTTCCTTTTTTTTTTTCTTTTTTTGTGATTTGTATGATGTTGATTTGATTTGATTTGATTTGATTGGATTGGATTCGATGTGTTTAGGGCGAGTGATAAGTGTCAGAAAGAGAAGAGGAAGACTATTAATGGTGATGATTTGCTTTGGGCTATGGCCACGTTGGGATTTGAGGAATATATTGATCCCCTTAAATCCTACCTTAATAGATACAGAGAGGTAAATTTATTTATTTATTTATTTATTTTGGTTTTATGTAGAGTTGATTCGTTATTGTACATGAATATCACTGTTGCGGTATTGTTGTAGGGCTCTTTCTGATCACGATATGGTTGAATTATTATTTTTATTATTATTATTATTTTGTGAGGTTATGTTATTTGTTTGATCTCATCAGTATGATGTGCTCACATTTGTTTTCTGTTTTTTTTCCTTTCCCTTTTTTATTGGTGGGGGCATTGGTGTTTGCTTCAGTTGGAGGTAATTGAAACCAGCTCTTAAACCTAGTATTCTACTGGTTTATTGTACCCCCCCACTACCCCCCCTTCTGACTTAAGCTTTTTTTTGTGAGAAAAGAATCGGCTGAGCTTTTCTGCTTGAATGTGAACTTTTCCAGTGTGATGCTAAAGGATCTTCAAGGGGTGGTGATGAATCTGCTAAGAGAGATGCAGTTGGAGTCTTGTCTGGTCAAAATTCCCAGGTTTATTGACTTTTTGTAGATTCTTTGTTTACAGAGAAATTATATTCATTGCCATTGACAAATCAATTGATTTTTTTTTTCCTTTATCATGTTATCATTCCTGGACTTTTGGTTTGAATATGTGCAGCAATATATGCCGCCGGGAGCATTGGCCTACATTAACACTCAAGTAACAATCTCTATTCTCTAAATTTCTCAGCATGTATTCTGTTCAGGAAATTTATGTTTATTATTCTCCTCTTGTTATTAACAGTAGTCCTGATATATAGATGATCCTATCTATTCTTTTAGTCCAGTTCTTGCTTGTAATGCGAAGTTAGCTTGTTAAGAAACTTGTAGGATCTATTGTAGGTGTTAGGTGGCCAACATGGAGGTCGAATCCATTGTCCCGAAGTGCGTTTTTCTTTTTCCAAAATGCCTAATGTCACCAGGACAAAACCAACTATTGGTAGTTCTGATTTACATTTACTGATTTTTAGAAGATATTGAAGAAAATAACTCGACTATTCCACCTGTCTCAAAAAGTCGAGAAAAAAAATTCTATATACCTTTTTTTTTCGCTCTCTCTGAGGAATTTTTAGACATAAGAATGATGTTGTCTAAGGTATAATTACAAAAAGTTTTCGAAGCTGATGCCCTAAAAGAAACATAAAAGCTCACCAGAGTCCAAACACTCTATTGTTCATAAAAGAAGATTTCATTATCTCAAAAAAGTTTTGTAATTTGATTCATAGTTCTGCCTTCTTGGTTTTATAGGATGAAAAGAAAATGAATTGCTTGTTGCTACCTGTCATAATAGGGTCTCTTGTGAGGAGGATATGCATGTTTACCATCGATTCACTGCTCAAAATAATTTGAATTGTAGTAATCTTCTTGCTATTTGTCCTAGTATAGAAGGATATGCCTGTTTACCTGTCTCATAGATTTGTAGTTTCTATAAAATAGCTATGTAGTTGATCATATCATAATTTCTTCTTTATGAAATGATATTAAATCTTTTAAGAAGGCCATGGAGGCTTTTATGTTATGGTGGTGGCGTAAATTTGTTGCTCTGATGATGGTGGAATGTTTAGTTTTGAACAACCTGGCATTCGTGTTTTTCAACTTCTTTTTTTTAAAAAAATTATTTTGTTATAATATCTAACTTTTAATTTAGCAAAATGAAAATACAAATATAATATAGGTTAAACCAGTTGGAAGGATTAAATCCTTAAATTCGTTCCAAATATATTAATAGAATTATAGAACTATACAAAAGAGCTCTAATTATAAGTAACCCCACCAATTATTGGCAATCACCGATAGTGAATGTTGCAAGACTTAAATATTGACCTCCGCAAGGAGGACAAATTATTAGGAGCAGCTACCACGTTGAGGTTGTTACTCACATGAATATCAAATCCACAGTGAAAAGACATTTGCGTTAATCTTTCAATCATGCGTGTAATTATCATGGTAATAATAACTTAACTCCTACCAACCTAGAGTCCACCCTTTCCCCATTAAGGCTAGCGATCTTCTATAAGTCTTCCAAACTTCCGTTCTAACAGGCTATATTTGGGGACAAGACTGTAGACGACTGGCAATGATATACGCCGGGCTTGCTAAAACATTGTAAGTGAAGAATGCTTACCTTTGTATCAAATTAGTTTTGTGCCAGGCCAGTTTTCTAAACCACGTTCTGCCTCTGAAACTAGCTTCATGGAATTTTTCTTCCCTTACCCACTTTTAATTACTTTTTACCAAGGAGTCAAAGAACTTGCTTGGCTAATCAATTTTTGATTTTATGTCTCATTGATGCAGTGACTATTAATTTATGATGACATGATCCGCCTTTGCTAACTTTGAGCTTGATGGTTTGAAGAACCAGGGTACCTTAAAAAGGTTATGAGTACAAATCCTCATGGCGGCGTGCGTGAATAAATGTCTGAGCTCCCTTTTTTGGGTACTAAAAATTGTGGGGTTTGCACGGTAGCCTTTTGTTAAAATAAGTGGAAGTCTGTAGATCGTGTGTGTTTAAATGGGTTAGAATGAAAAGCAGTGTTGAAATGTTAAATTTTGGCGGGCCTTTGATTTTTAGCATTTTTATGCGTATTTAAACTTCGACAAGATCTTCGAATTGAGGACCATCTAGTAGATTGTAAATTTTATCTTTTATTTGATTGATATCTAAACCCTTTCCAACTTCCTGTTTTGGATCAAAAGGTTCTTTACACTAATAGAGTTTAAGATTATGAAGTGTGGTGGCTAGTTTGGTGAAATTTTTATGCAGTCTGAGGTGTCTGCGTGAGGGTGACTCAAATATTTATTTTAACTTGGCTGTTTGAGTCTTATACTTATTGGTACGTCATATTTGAGCAATAAACAGATCCCCCTCCTCCTATACTTACTGTGTCAACACAATTTTTCCCTTCAAAAAAATGTGTGGAAGAAATTGCCGTGTGTTCTGCACGTTTGTATAGTCTTTTTACCATCGTTTAATTCTTGAAAAATTCTTGTTCTATTTGAGGAGAAGCGAGAGATTTCTGACATCATTATGGGAAAATGAGTACCTCATTCTGGTTTTTAGAATATGATTTGTACAAGATTATGCAATTGGTTTCTTTTAAGATTTCTTTGTGGAATGAGCCTCAGTGCAATGGAGGCATGCATGAGATTTTGCATATAGATATTCACAATATGTACAGCATTGATATTTACCTATCTATAAACATGCATGTCTTAAAGAGAAATTTATTTACTTGTTTTACTTTTTGTTTTTTATAGAGGTCATTTGTCTAATGAATGTTTTGGCTGACTTGGTGATTTATTGTTTCTGCATTCAACAGGGACAGCACATGATCATTCCTTCAATGCAGAATAATGAATAAGAATCTCCAGCATTTCCACTCGGATTTCTTGAAATCTGAGGCTGGTAGAAGCGTTCAACACCTACATAGCTTTCTTTACAATCAATTTGGCTAATTTATTATGAAAATGATGATATTATAATACATATTTTCTGGGTTTCCTGTGTTGGTTCTGGATTTGATTTGGGTTTAGGCTTCGATTTTATTGATGCTCTCGTCAGCTAAAATTCTTGTAAATTTGGGAGCGTCAATTTAGTATAGTTTGCTTCGGTTATTTGGAAACTGGAAAAATATTTATCCTCTTTCCCCCACTTGTGTTTCTTTTGTTTCGAATTATTAAGAAAGTGATACATAATATCCTTCTCCCCTTCCCTTTTGCCATGAATTT

mRNA sequence

GCCTCCTCTTCCTCCTCCTCCTCCTCCTCTTTCTTCTCTTCTTCGGTACTTTTCTCTTCCACAATCCCTTTCAATTCCACTTCTTAGGGTTTTCATCCCATTCTTTTCCTCTTCCTTCCCTTCAGGTTCTTCTTCTCTCTTTCTCCTATGGCCGACCCTCCCACCAGTCCTCCTGGCGGCAGCCACGAAAGCGGCGGTGAACAAAGCCCTAACACTGCTGCTGCCGTTCGTGAACAAGATCGTTTCCTTCCCATCGCTAATATTAGTCGGATCATGAAGAAAGCTTTACCTGCTAATGGAAAGATCGCTAAAGACGCTAAAGATACTGTCCAGGAATGTGTTTCTGAATTCATTAGCTTCGTTACTAGCGAGGCGAGTGATAAGTGTCAGAAAGAGAAGAGGAAGACTATTAATGGTGATGATTTGCTTTGGGCTATGGCCACGTTGGGATTTGAGGAATATATTGATCCCCTTAAATCCTACCTTAATAGATACAGAGAGTTGGAGTGTGATGCTAAAGGATCTTCAAGGGGTGGTGATGAATCTGCTAAGAGAGATGCAGTTGGAGTCTTGTCTGGTCAAAATTCCCAGCAATATATGCCGCCGGGAGCATTGGCCTACATTAACACTCAAGCTATATTTGGGGACAAGACTGTAGACGACTGGCAATGATATACGCCGGGCTTGCTAAAACATTTGACTATTAATTTATGATGACATGATCCGCCTTTGCTAACTTTGAGCTTGATGGTTTGAAGAACCAGGGTACCTTAAAAAGGTTATGAGTACAAATCCTCATGGCGGCGTGCGTGAATAAATGTCTGAGCTCCCTTTTTTGGGGACAGCACATGATCATTCCTTCAATGCAGAATAATGAATAAGAATCTCCAGCATTTCCACTCGGATTTCTTGAAATCTGAGGCTGGTAGAAGCGTTCAACACCTACATAGCTTTCTTTACAATCAATTTGGCTAATTTATTATGAAAATGATGATATTATAATACATATTTTCTGGGTTTCCTGTGTTGGTTCTGGATTTGATTTGGGTTTAGGCTTCGATTTTATTGATGCTCTCGTCAGCTAAAATTCTTGTAAATTTGGGAGCGTCAATTTAGTATAGTTTGCTTCGGTTATTTGGAAACTGGAAAAATATTTATCCTCTTTCCCCCACTTGTGTTTCTTTTGTTTCGAATTATTAAGAAAGTGATACATAATATCCTTCTCCCCTTCCCTTTTGCCATGAATTT

Coding sequence (CDS)

ATGGCCGACCCTCCCACCAGTCCTCCTGGCGGCAGCCACGAAAGCGGCGGTGAACAAAGCCCTAACACTGCTGCTGCCGTTCGTGAACAAGATCGTTTCCTTCCCATCGCTAATATTAGTCGGATCATGAAGAAAGCTTTACCTGCTAATGGAAAGATCGCTAAAGACGCTAAAGATACTGTCCAGGAATGTGTTTCTGAATTCATTAGCTTCGTTACTAGCGAGGCGAGTGATAAGTGTCAGAAAGAGAAGAGGAAGACTATTAATGGTGATGATTTGCTTTGGGCTATGGCCACGTTGGGATTTGAGGAATATATTGATCCCCTTAAATCCTACCTTAATAGATACAGAGAGTTGGAGTGTGATGCTAAAGGATCTTCAAGGGGTGGTGATGAATCTGCTAAGAGAGATGCAGTTGGAGTCTTGTCTGGTCAAAATTCCCAGCAATATATGCCGCCGGGAGCATTGGCCTACATTAACACTCAAGCTATATTTGGGGACAAGACTGTAGACGACTGGCAATGA

Protein sequence

MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELECDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQAIFGDKTVDDWQ

Homology

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BLAST of Cmc10g0272081 vs. NCBI nr
Match: XP_008445846.1 (PREDICTED: nuclear transcription factor Y subunit B-1-like isoform X2 [Cucumis melo] >XP_008445847.1 PREDICTED: nuclear transcription factor Y subunit B-1-like isoform X2 [Cucumis melo])

HSP 1 Score: 350.9 bits (899), Expect = 6.3e-93
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60
           MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT
Sbjct: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60

Query: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120
           VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE
Sbjct: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120

Query: 121 CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQAIFGDKTVDDWQ 175
           CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQAIFGDKTVDDWQ
Sbjct: 121 CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQAIFGDKTVDDWQ 174

[Close]

BLAST of Cmc10g0272081 vs. NCBI nr
Match: XP_031741693.1 (nuclear transcription factor Y subunit B-1 isoform X4 [Cucumis sativus] >KGN49974.2 hypothetical protein Csa_000045 [Cucumis sativus])

HSP 1 Score: 335.5 bits (859), Expect = 2.7e-88
Identity = 167/174 (95.98%), Postives = 169/174 (97.13%), Query Frame = 0


Query: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60
           MADPPTSPPG SHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT
Sbjct: 1   MADPPTSPPGCSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60

Query: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120
           VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE
Sbjct: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120

Query: 121 CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQAIFGDKTVDDWQ 175
           CDAKGSSRGGDESAKRDAVGVL GQNSQQYM PG+L YINTQAIFG KTV+DWQ
Sbjct: 121 CDAKGSSRGGDESAKRDAVGVLPGQNSQQYMQPGSLTYINTQAIFGHKTVEDWQ 174

[Close]

BLAST of Cmc10g0272081 vs. NCBI nr
Match: XP_008445850.1 (PREDICTED: nuclear transcription factor Y subunit B-1-like isoform X4 [Cucumis melo])

HSP 1 Score: 323.6 bits (828), Expect = 1.1e-84
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60
           MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT
Sbjct: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60

Query: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120
           VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE
Sbjct: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120

Query: 121 CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ 163
           CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ
Sbjct: 121 CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ 162

[Close]

BLAST of Cmc10g0272081 vs. NCBI nr
Match: XP_008445844.1 (PREDICTED: nuclear transcription factor Y subunit B-1-like isoform X1 [Cucumis melo])

HSP 1 Score: 323.6 bits (828), Expect = 1.1e-84
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60
           MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT
Sbjct: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60

Query: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120
           VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE
Sbjct: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120

Query: 121 CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ 163
           CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ
Sbjct: 121 CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ 162

[Close]

BLAST of Cmc10g0272081 vs. NCBI nr
Match: XP_008445851.1 (PREDICTED: nuclear transcription factor Y subunit B-1-like isoform X5 [Cucumis melo])

HSP 1 Score: 323.6 bits (828), Expect = 1.1e-84
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60
           MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT
Sbjct: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60

Query: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120
           VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE
Sbjct: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120

Query: 121 CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ 163
           CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ
Sbjct: 121 CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ 162

[Close]

BLAST of Cmc10g0272081 vs. ExPASy Swiss-Prot
Match: Q8VYK4 (Nuclear transcription factor Y subunit B-8 OS=Arabidopsis thaliana OX=3702 GN=NFYB8 PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.7e-54
Identity = 111/150 (74.00%), Postives = 126/150 (84.00%), Query Frame = 0


Query: 1   MADPPTSPPG--GSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAK 60
           MA+     PG  GSHESGG+QSP  +  VREQDRFLPIANISRIMK+ LPANGKIAKDAK
Sbjct: 1   MAESQAKSPGGCGSHESGGDQSPR-SLHVREQDRFLPIANISRIMKRGLPANGKIAKDAK 60

Query: 61  DTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRE 120
           + VQECVSEFISFVTSEASDKCQ+EKRKTINGDDLLWAMATLGFE+Y++PLK YL RYRE
Sbjct: 61  EIVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYRE 120

Query: 121 LECDAKGSSRGGDESAKRDAVGVLSGQNSQ 149
           +E D KGS++GGD +AK+D     +GQ SQ
Sbjct: 121 MEGDTKGSAKGGDPNAKKDGQSSQNGQFSQ 149

[Close]

BLAST of Cmc10g0272081 vs. ExPASy Swiss-Prot
Match: Q67XJ2 (Nuclear transcription factor Y subunit B-10 OS=Arabidopsis thaliana OX=3702 GN=NFYB10 PE=1 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.5e-54
Identity = 110/139 (79.14%), Postives = 120/139 (86.33%), Query Frame = 0


Query: 10  GGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFI 69
           GGSHESGG+QSP  +  VREQDRFLPIANISRIMK+ LP NGKIAKDAK+T+QECVSEFI
Sbjct: 11  GGSHESGGDQSPR-SLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFI 70

Query: 70  SFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELECDAKGSSRG 129
           SFVTSEASDKCQ+EKRKTINGDDLLWAMATLGFE+YIDPLK YL RYRE+E D KGS +G
Sbjct: 71  SFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSGKG 130

Query: 130 GDESAKRDAVGVLSGQNSQ 149
           G+ SAKRD      GQ SQ
Sbjct: 131 GESSAKRD------GQPSQ 142

[Close]

BLAST of Cmc10g0272081 vs. ExPASy Swiss-Prot
Match: P25209 (Nuclear transcription factor Y subunit B OS=Zea mays OX=4577 GN=NFY2 PE=2 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.5e-52
Identity = 105/149 (70.47%), Postives = 124/149 (83.22%), Query Frame = 0


Query: 1   MADPPTSP--PGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAK 60
           MA+ P SP   GGSHESG  +      +VREQDRFLPIANISRIMKKA+PANGKIAKDAK
Sbjct: 1   MAEAPASPGGGGGSHESGSPRGGGGGGSVREQDRFLPIANISRIMKKAIPANGKIAKDAK 60

Query: 61  DTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRE 120
           +TVQECVSEFISF+TSEASDKCQ+EKRKTINGDDLLWAMATLGFE+YI+PLK YL +YRE
Sbjct: 61  ETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYRE 120

Query: 121 LECDAKGSSRGGDESAKRDAVGVLSGQNS 148
           +E D+K +++  D S K+DA+G +   +S
Sbjct: 121 MEGDSKLTAKSSDGSIKKDALGHVGASSS 149

[Close]

BLAST of Cmc10g0272081 vs. ExPASy Swiss-Prot
Match: Q9SLG0 (Nuclear transcription factor Y subunit B-1 OS=Arabidopsis thaliana OX=3702 GN=NFYB1 PE=1 SV=2)

HSP 1 Score: 204.5 bits (519), Expect = 9.6e-52
Identity = 108/145 (74.48%), Postives = 119/145 (82.07%), Query Frame = 0


Query: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60
           MAD P+SP G   ESGG        +VREQDR+LPIANISRIMKKALP NGKI KDAKDT
Sbjct: 1   MADTPSSPAGDGGESGG--------SVREQDRYLPIANISRIMKKALPPNGKIGKDAKDT 60

Query: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120
           VQECVSEFISF+TSEASDKCQKEKRKT+NGDDLLWAMATLGFE+Y++PLK YL RYRELE
Sbjct: 61  VQECVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELE 120

Query: 121 CDAKGSSRGGDESAKRDAVGVLSGQ 146
            D KGS + GD S  RDA G +SG+
Sbjct: 121 GDNKGSGKSGDGS-NRDAGGGVSGE 136

[Close]

BLAST of Cmc10g0272081 vs. ExPASy Swiss-Prot
Match: Q60EQ4 (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB3 PE=1 SV=2)

HSP 1 Score: 204.5 bits (519), Expect = 9.6e-52
Identity = 114/182 (62.64%), Postives = 131/182 (71.98%), Query Frame = 0


Query: 1   MADPPTSP--PGGSHES-------GGEQSPNTAAAVREQDRFLPIANISRIMKKALPANG 60
           MAD P SP   GGSHES       GG         VREQDRFLPIANISRIMKKA+PANG
Sbjct: 1   MADGPGSPGGGGGSHESGSPRGGGGGGGGGGGGGGVREQDRFLPIANISRIMKKAIPANG 60

Query: 61  KIAKDAKDTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKS 120
           KIAKDAK+TVQECVSEFISF+TSEASDKCQ+EKRKTINGDDLLWAMATLGFE+YI+PLK 
Sbjct: 61  KIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKV 120

Query: 121 YLNRYRELECDAKGSSRGGDESAKRDAVGVLSGQNS------QQYMPPGALAYINTQAIF 168
           YL +YRE+E D+K +++ GD S K+D +G   G +S      QQ      + Y+  Q   
Sbjct: 121 YLQKYREMEGDSKLTAKAGDGSVKKDVLGSHGGSSSSAQGMGQQAAYNQGMGYMQPQYHN 180

[Close]

BLAST of Cmc10g0272081 vs. ExPASy TrEMBL
Match: A0A1S3BD57 (nuclear transcription factor Y subunit B-1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488744 PE=3 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.1e-93
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60
           MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT
Sbjct: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60

Query: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120
           VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE
Sbjct: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120

Query: 121 CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQAIFGDKTVDDWQ 175
           CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQAIFGDKTVDDWQ
Sbjct: 121 CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQAIFGDKTVDDWQ 174

[Close]

BLAST of Cmc10g0272081 vs. ExPASy TrEMBL
Match: A0A1S3BEC6 (nuclear transcription factor Y subunit B-1-like isoform X5 OS=Cucumis melo OX=3656 GN=LOC103488744 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.2e-85
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60
           MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT
Sbjct: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60

Query: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120
           VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE
Sbjct: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120

Query: 121 CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ 163
           CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ
Sbjct: 121 CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ 162

[Close]

BLAST of Cmc10g0272081 vs. ExPASy TrEMBL
Match: A0A1S3BEC1 (nuclear transcription factor Y subunit B-1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488744 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.2e-85
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60
           MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT
Sbjct: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60

Query: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120
           VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE
Sbjct: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120

Query: 121 CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ 163
           CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ
Sbjct: 121 CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ 162

[Close]

BLAST of Cmc10g0272081 vs. ExPASy TrEMBL
Match: A0A1S3BDN3 (nuclear transcription factor Y subunit B-1-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103488744 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.2e-85
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60
           MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT
Sbjct: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60

Query: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120
           VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE
Sbjct: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120

Query: 121 CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ 163
           CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ
Sbjct: 121 CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ 162

[Close]

BLAST of Cmc10g0272081 vs. ExPASy TrEMBL
Match: A0A5A7STT8 (Nuclear transcription factor Y subunit B-1-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00340 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.9e-82
Identity = 160/162 (98.77%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60
           MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT
Sbjct: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60

Query: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120
           VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYR  E
Sbjct: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYR--E 120

Query: 121 CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ 163
           CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ
Sbjct: 121 CDAKGSSRGGDESAKRDAVGVLSGQNSQQYMPPGALAYINTQ 160

[Close]

BLAST of Cmc10g0272081 vs. TAIR 10
Match: AT2G37060.1 (nuclear factor Y, subunit B8 )

HSP 1 Score: 213.0 bits (541), Expect = 1.9e-55
Identity = 111/150 (74.00%), Postives = 126/150 (84.00%), Query Frame = 0


Query: 1   MADPPTSPPG--GSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAK 60
           MA+     PG  GSHESGG+QSP  +  VREQDRFLPIANISRIMK+ LPANGKIAKDAK
Sbjct: 1   MAESQAKSPGGCGSHESGGDQSPR-SLHVREQDRFLPIANISRIMKRGLPANGKIAKDAK 60

Query: 61  DTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRE 120
           + VQECVSEFISFVTSEASDKCQ+EKRKTINGDDLLWAMATLGFE+Y++PLK YL RYRE
Sbjct: 61  EIVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYRE 120

Query: 121 LECDAKGSSRGGDESAKRDAVGVLSGQNSQ 149
           +E D KGS++GGD +AK+D     +GQ SQ
Sbjct: 121 MEGDTKGSAKGGDPNAKKDGQSSQNGQFSQ 149

[Close]

BLAST of Cmc10g0272081 vs. TAIR 10
Match: AT2G37060.2 (nuclear factor Y, subunit B8 )

HSP 1 Score: 213.0 bits (541), Expect = 1.9e-55
Identity = 111/150 (74.00%), Postives = 126/150 (84.00%), Query Frame = 0


Query: 1   MADPPTSPPG--GSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAK 60
           MA+     PG  GSHESGG+QSP  +  VREQDRFLPIANISRIMK+ LPANGKIAKDAK
Sbjct: 1   MAESQAKSPGGCGSHESGGDQSPR-SLHVREQDRFLPIANISRIMKRGLPANGKIAKDAK 60

Query: 61  DTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRE 120
           + VQECVSEFISFVTSEASDKCQ+EKRKTINGDDLLWAMATLGFE+Y++PLK YL RYRE
Sbjct: 61  EIVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYRE 120

Query: 121 LECDAKGSSRGGDESAKRDAVGVLSGQNSQ 149
           +E D KGS++GGD +AK+D     +GQ SQ
Sbjct: 121 MEGDTKGSAKGGDPNAKKDGQSSQNGQFSQ 149

[Close]

BLAST of Cmc10g0272081 vs. TAIR 10
Match: AT2G37060.3 (nuclear factor Y, subunit B8 )

HSP 1 Score: 213.0 bits (541), Expect = 1.9e-55
Identity = 111/150 (74.00%), Postives = 126/150 (84.00%), Query Frame = 0


Query: 1   MADPPTSPPG--GSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAK 60
           MA+     PG  GSHESGG+QSP  +  VREQDRFLPIANISRIMK+ LPANGKIAKDAK
Sbjct: 1   MAESQAKSPGGCGSHESGGDQSPR-SLHVREQDRFLPIANISRIMKRGLPANGKIAKDAK 60

Query: 61  DTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRE 120
           + VQECVSEFISFVTSEASDKCQ+EKRKTINGDDLLWAMATLGFE+Y++PLK YL RYRE
Sbjct: 61  EIVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYRE 120

Query: 121 LECDAKGSSRGGDESAKRDAVGVLSGQNSQ 149
           +E D KGS++GGD +AK+D     +GQ SQ
Sbjct: 121 MEGDTKGSAKGGDPNAKKDGQSSQNGQFSQ 149

[Close]

BLAST of Cmc10g0272081 vs. TAIR 10
Match: AT3G53340.1 (nuclear factor Y, subunit B10 )

HSP 1 Score: 212.6 bits (540), Expect = 2.5e-55
Identity = 110/139 (79.14%), Postives = 120/139 (86.33%), Query Frame = 0


Query: 10  GGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFI 69
           GGSHESGG+QSP  +  VREQDRFLPIANISRIMK+ LP NGKIAKDAK+T+QECVSEFI
Sbjct: 11  GGSHESGGDQSPR-SLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFI 70

Query: 70  SFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELECDAKGSSRG 129
           SFVTSEASDKCQ+EKRKTINGDDLLWAMATLGFE+YIDPLK YL RYRE+E D KGS +G
Sbjct: 71  SFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSGKG 130

Query: 130 GDESAKRDAVGVLSGQNSQ 149
           G+ SAKRD      GQ SQ
Sbjct: 131 GESSAKRD------GQPSQ 142

[Close]

BLAST of Cmc10g0272081 vs. TAIR 10
Match: AT2G38880.2 (nuclear factor Y, subunit B1 )

HSP 1 Score: 204.5 bits (519), Expect = 6.8e-53
Identity = 108/145 (74.48%), Postives = 119/145 (82.07%), Query Frame = 0


Query: 1   MADPPTSPPGGSHESGGEQSPNTAAAVREQDRFLPIANISRIMKKALPANGKIAKDAKDT 60
           MAD P+SP G   ESGG        +VREQDR+LPIANISRIMKKALP NGKI KDAKDT
Sbjct: 1   MADTPSSPAGDGGESGG--------SVREQDRYLPIANISRIMKKALPPNGKIGKDAKDT 60

Query: 61  VQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLNRYRELE 120
           VQECVSEFISF+TSEASDKCQKEKRKT+NGDDLLWAMATLGFE+Y++PLK YL RYRELE
Sbjct: 61  VQECVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELE 120

Query: 121 CDAKGSSRGGDESAKRDAVGVLSGQ 146
            D KGS + GD S  RDA G +SG+
Sbjct: 121 GDNKGSGKSGDGS-NRDAGGGVSGE 136

The following BLAST results are available for this feature:

BLAST of Cmc10g0272081 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445846.1	6.3e-93	100.00	PREDICTED: nuclear transcription factor Y subunit B-1-like isoform X2 [Cucumis m...	[more]
XP_031741693.1	2.7e-88	95.98	nuclear transcription factor Y subunit B-1 isoform X4 [Cucumis sativus] >KGN4997...	[more]
XP_008445850.1	1.1e-84	100.00	PREDICTED: nuclear transcription factor Y subunit B-1-like isoform X4 [Cucumis m...	[more]
XP_008445844.1	1.1e-84	100.00	PREDICTED: nuclear transcription factor Y subunit B-1-like isoform X1 [Cucumis m...	[more]
XP_008445851.1	1.1e-84	100.00	PREDICTED: nuclear transcription factor Y subunit B-1-like isoform X5 [Cucumis m...	[more]

BLAST of Cmc10g0272081 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYK4	2.7e-54	74.00	Nuclear transcription factor Y subunit B-8 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q67XJ2	3.5e-54	79.14	Nuclear transcription factor Y subunit B-10 OS=Arabidopsis thaliana OX=3702 GN=N...	[more]
P25209	1.5e-52	70.47	Nuclear transcription factor Y subunit B OS=Zea mays OX=4577 GN=NFY2 PE=2 SV=1	[more]
Q9SLG0	9.6e-52	74.48	Nuclear transcription factor Y subunit B-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q60EQ4	9.6e-52	62.64	Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of Cmc10g0272081 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BD57	3.1e-93	100.00	nuclear transcription factor Y subunit B-1-like isoform X2 OS=Cucumis melo OX=36...	[more]
A0A1S3BEC6	5.2e-85	100.00	nuclear transcription factor Y subunit B-1-like isoform X5 OS=Cucumis melo OX=36...	[more]
A0A1S3BEC1	5.2e-85	100.00	nuclear transcription factor Y subunit B-1-like isoform X1 OS=Cucumis melo OX=36...	[more]
A0A1S3BDN3	5.2e-85	100.00	nuclear transcription factor Y subunit B-1-like isoform X4 OS=Cucumis melo OX=36...	[more]
A0A5A7STT8	1.9e-82	98.77	Nuclear transcription factor Y subunit B-1-like isoform X3 OS=Cucumis melo var. ...	[more]

BLAST of Cmc10g0272081 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37060.1	1.9e-55	74.00	nuclear factor Y, subunit B8	[more]
AT2G37060.2	1.9e-55	74.00	nuclear factor Y, subunit B8	[more]
AT2G37060.3	1.9e-55	74.00	nuclear factor Y, subunit B8	[more]
AT3G53340.1	2.5e-55	79.14	nuclear factor Y, subunit B10	[more]
AT2G38880.2	6.8e-53	74.48	nuclear factor Y, subunit B1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00615	CCAATSUBUNTA	coord: 80..98 score: 39.35 coord: 99..117 score: 35.65 coord: 61..79 score: 55.86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..149
None	No IPR available	PANTHER	PTHR11064:SF134	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED	coord: 1..155
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 22..150 e-value: 3.7E-46 score: 158.4
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 30..131
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 33..97 e-value: 4.1E-28 score: 97.4
IPR027113	Transcription factor NFYB/HAP3	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 1..155
IPR003956	Transcription factor, NFYB/HAP3, conserved site	PROSITE	PS00685	NFYB_HAP3	coord: 64..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0272081.1	Cmc10g0272081.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding