Cmc10g0271241 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0271241
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Katanin p80 WD40 repeat-containing subunit B1 homolog
Location	CMiso1.1chr10: 5092068 .. 5101976 (+)
RNA-Seq Expression	Cmc10g0271241
Synteny	Cmc10g0271241

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGACACAAAACGTGAAAGCGCCTCCCTCTCTTCTCTAATCAAATTCATTTTTTATTTCTTCTTTTTCGTTATTATTATTATTATTATTATTCTTTTTATTTTTTGAAATTGAGTTTTGGCCTTCTGTCCTTCTCTGTCCTTCTCTCTCTCTCTCTCTCTCTCTCGGAAGAGCTTTGCTTCGGCGGGATATGCCCATGGCGGTGCCGTCGTTGTTGTAAACAAAAATCCAAGTGTTTAATCGCCGCCGCCGCTGCCGCCTATACCGTCTCAGCAACTCCGACCGACGCCTCTAACTTCGAATTTCTCTTTTCTAATACTGTACTGTGTTTCTCTCTCTCTTTCTTTGTCTTCTCGTTTTGAAATTTGGTTTTTGGATTTTCTTTTTTCTGTTTCTGTTGTGGTTAATGTTTGTGAGTGTGGAGAAAGATGAAGCTAACTTGAGTTGGAAATGTAGCGTGTTGTTGTAACCTTTTTCTTGACTTGCTTGAAGCAAACTGATAAACCTTCATTTCTGGTTTTCTTCTTTGGTGGTTTGTTTGTGTTTTTTTCTTTTCCTAACTTTGATCTGGTTGCTGGTGGTTTCTTGATTTAACTTTTGTTTTTTCTTTGGAAATTTGTGATACAGTGACGCTGTTTGGGGCTGGTGGTGGAAGAAAAGGTGGAGTTTGCTTTTGAGATCTAAGACGTTGTGAGTGGAGATCGTCGGTTCTTGGAAGTAGTTGATGAAGCAGTGTCACTAGTTATATTGCGCTATTCTCGGATTCAAATGTTTTGGGGAATCTGCACAGTGGAATGCTGTTGTTGCAATTCCAATTTCTAGGTTTTCTTCGCGTTCTGATGCTTTTGTGGTTCTAAATTCTTGGTTATACATGCCATGACTACCAAACGGGCGTACAAGCTACGTATCCTTTCTCAATGTCTTGGGTTCAACTTGGGATTTTAAATTTTCAAACCGAAATGTCATTACTTACACTTGATCTGTTTGTATGGCCTCGTTATTTTCACTTGCGATTTTCATTTCTATCTTCATCAGATCTCTGAGTGTGTTAGTGCATATATTATGTTTTATTTCGAAGCATTTCATTTGGGTATATGGTTGCCAATTAGAAATAGCCCTGGGTTATAGTTGTAGGCTGAGGAAGGCTCCATCTTTTTTGCCTTAACAATTATTCAAACAGAAGAATTTGTGGCACATTCTTCCGCTGTCAATTGCCTGAAGATTGGAAGGAAGTCATCCCGTGTTCTTGTCACCGGAGGGGAAGACTTCAAAGTCAATCTCTGGGCTATTGGTAAACCCAATGCCATACTGGTATGTTTCCATTTCTACTGTTAATGGTTTTCTATCTCTTGTCCCTGGTCAGTAGAAAAGAAATTATGCTCTATTAGTTTGTTCTTAAGTTTAAAAAGATATCATTACAAAGATTGACAAACCAATTATTTGATAGTTTTCTTGAGACCTCGTACATTTTAGATTTGTCTTATATTTCTTGTCCACGATATTCAAACATTCTAGTGTAAAAATTTCCCCCTCTTGTTCTAGCATCCTTTTCTTCTGAATTCTTTTTCTTCAATCACTTGTCTCTCATTTTATTGGAGTACTTTTAACAGACCTTGTGATGAACGCTACATGCAATTAATTTTAGTCACGTTATTCTCCCTCCATCTACCCCCAAAAGAGAAAAATAAAAAATAAAAAATCCATGTGCACTATGGTAAATAGGAACAAATATATATATATATATATATATATATATATATATATATTAGGTTATTTTAAATTTAAGAAAGATTAATGCAGACTCATTTTAGCTAAAAATCTATTTGTTATTTCATGTTACTTTGCACTTTAACTTAGCTGTACTTTCATATCCAGAGTTTGACTGGCCATACGAGCGGAATAGATTCTGTAAGCTTTGACTCATCAGAAGTGTTGGTAGCTGCAGGGGCTGCTAGTGGCACAATCAAGCTTTGGGATTTGGAGGAGGCCAAAAGTATGCTTTCTATCACCTCAATATATTTCTTTCATCTCGTTGACAATGTCCAATTTTATATTGCTGATTTTCATGGATAATTGTACCGTGAAGTTTACTTGTACTTCCCCTTTTCTGGATTTCTCTTGGATATTTTCCAGTTGTTCGAACGCTTACTGGTCATAGATCCAATTGCATTTCTGTGGATTTTCATCCCTTCGGGGAATTCTTTGCTTCTGGGTCTTTGGATACAAATCTTAAGATATGGGACATCAGGAAGAAAGGGTGTATCCACACATACAAAGGTCACACTCGAGGAGTCAATGCAATCAGATTTACACCAGATGGCCGTTGGGTTGTATCTGGTGGAGAAGACAACACAGTGAAGGTTAGTCATCCATTGTTTTCCTTACAGTTTCGGTTCACGAATTATTACTGTCTTTTTAGAGGAGAGCAACAACCTACTTCTTGATAAAACCTACGGAGCTGTATTGCAGTGTGTGTAACTATATTAGTCTCATTTTTCTTAACCAAAAAATATTTTGACCTCACCAAGGAGTCTGGAATCCTTTCCTTCATCTTATTGGCCCAGAGAGCTTTCTTTTATCTCTATTACCCTTGGCCTTGGTTATAGCTTGGAACTAGGATTTCTTGTCCCCTTTTCTAGTAATATTGTTTATATTATTTGTTTCCTTGAATGTTTACCCTCAATTTATCTTCCTAGAAGCGTCTAGACTTTGGGCACAGATGACTTTAATGTATTGTCTGGTGGGTGGTGCCAACTGCCAAGTGAGTTGATTTGCAATAGCGTTACATCATTTGCATTGCTTAGGTGTGCTCGCCAAGGGAAACTCTTTTAGTACTCAACTGCTTTTCATACTTTTTTTCCTTTCACACTCCTACCATTCTCTAACTTTTGTCCTCTTTAGCTCTTTTACTCCTTTATTTTACTAGCAGGTGATATCCATGTGCCTAAATGGTTATAGATCACGACATTGATATGCCTAGATATTTACTCTTCTAGGTATATTTTTAACCTTATATGTACTGAATGTGAATGTCATTACTTAATTAGGTTTAAACTTCGGTTTGCACCTTACAACCTAGCCATGGTGGAGCCTTGTATGGAAAAGTACTGGTTTTCTTTATGATGTTTGATGGAGAAGAATGGAACTATTGATACTTGGTTTGGTGGTTATTTTTCAGGGTGTGTTTGGTTTCAACCAACTTTTTTTTGTTGTGGGTTCTTCATTTAGGCGTATTCAGCGGGGTTTATTTCTTATCATTATTATAATAAATGAAATTAAAGGCACTTATCCTTGTGAAGTTGAGCCAATTAACCCGGTGGTTGTTTTTTCTTTTCTTTTTTTGGGCGGGTGAGTGTAAAAGATTAGTTGAATACAAATTTCATAATGCTAACGCACTTGGCAATGAAGGTCAAATTTTAGTTATTTATTATGTCATTTTCTTTATTTTATAATTTGTTGTAACAATTATATATGTATTATGTCATTTCTTGCAAATGGGATATACTATTCACATGCAGAACTTGTGTTTGTATTTTCATTTAGGTACCATTTCCAATTCCAAGGAACCTTCTAATGTATATTTAATATATATTTTTTTAACAGCTCTGGGATTTAACTGCTGGAAAGTTGTTGCATGATTTTAAGTGCCACGAGGGTCAGGTTCAATGTATAGACTTTCACCCTCATGAATTTTTGCTAGCAACAGGTTTGTTATGCACTTTTACCTTTATCTCATCGTTGTTTCTATATTTAAAAAAAGAAAAATTAAATTATGTGTGTTATCAAGTCATGTGTCTATCCTATTTCTTTTGCTTGAGGCTTTAAATTTAAATAGTAGATTTTGCATATGTGAAAAACTAGAGATCTGCTTGTTATTCAATAATTTCTGAAATTTCTTTTTGTCAATCAGGTTCAGCAGATAAAACAGTTAAATTTTGGGACCTGGAAACCTTTGAGTTGATTGGTTCCGCTGGACCTGAGGTATCTTTCTTAATCCAATTTTCTTCTCCTGGCTTATGAATATATATACCTAAGAATGAATATTTTGTTAGGGTACTGTCTTATGATTTCTTTTTGGAGATCTCTTATTTTTGTGTCTGTTTCAGACCAGTGGAGTCCGTTGTTTAACATTTAATCCTGATGGGAGGACATTGCTTTGCGGATTGCATGAAAGTTTGAAGGTAATAATTTGTGCGCAAATGGTTCATCTGTCCAGAACTGCAAAATTTTCGTTCTTTCTAAATTTATTTATATGATTGTGCTACTTCGTAGGTTTTCTCATGGGAACCAATAAGATGTCATGACGGTGTGGAAGTTGGTTGGTCTAGGCTGTCTGATCTTAGTGTTCATGAGGGGAAACTTCTTGGTTGTTCGTACAATCAGAGCTGTGTTGGAGTGTGGGTTGTAGATATTACGGTACAATGCATTATCCATCTACTCCCTATTGAGATTCCCCACTTTATTGTTCTTGTTTTTTACTCAATGTATTGTTAGTAAAAAAGGACAAAAAAAAAACTTAATATAATTATATCGTTGCCTCTTGCACAGCGGACAGAGCCCTATGCAGTTAACAATGCTAACAGACTAAATGGCCGATCAGAACCTAAATCCAGCAGTCATCTACAAAATGAGAACAATACCAAGACTGGTTTTTGTGGATTGTCGGTCTCACAAACTTCTGATCCACTATTAAAGGAGACCAAAACATTGGGAAGGTTGTCAGTTTCTCAAAATTCAGATGTTGCCAAGGATCCAAAATCTTTGTCGTGTAAGCAATTTTCTTTTGTCTTTGTTTTCATATATATGGTTTCACTTCTGTTTTTCGTTGTCATTTTCTAAAATCACCCTTCGTATTGGATTTTTCTTATGTTTGATTGGCACAACCTCTCCATTTACTTAAACTTGGAGTAAATATTCTTGATTTTTTCCCCTCACTGATTGAAGCCACAGGAAATGGACCAAGTACTCCTCAAAAGATCAATTTAAATGCTGGCTCAAAAACTAATTTGGTTACCTCAGCAGCAGTACCTAGTGCAGTGGTGCCGAAGAGAAACTCTGTGAAGGCTACTTCAACATTCAACAATCCAATCTTCAATAAGTCAGATGTGATACCTGTAATCGTACCCAGGACAAGTTCAAGGCATGAGCAGGATGATTCTAGAAAGGAGTTTGATGTTGCTGGAAGAGCAGGCCCCATATCAAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAGGAGTTTGATGTTGCTGGAAGAGCAGTCACCGTATCAAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAAGAATTTGATGTTGCTGGAAGAGTAATGCCACTGTCCAGGACAAATTCAAGGCACGAGCAGGATGATTCAAGAAAGGAATGCGACATTACTGGAAGAACAGTTCCAGCACCATCGCTATCGAAAACTACCGATAACAGGAGGTTTCCCAATAGTAGAGATGAAGTTGATAATTCAACTATCTCTGTGCTTTCTGAATCCAGAGGTCTGAAGGCAAATGACATGAGCGCCATTGCAGATAATAGGAATTCCTTGCATGGCATTGGTTCATTTCAAGGAGTATCTGCTCCACAGAAGATTGTGAAAGAAGAAAGATATATTGGATCTGGCAAGACTGAAACAGAAACAAAAGATACAACAGCAAACTACAAGCACGAAGGTTGTACTTAATTTAGTGACCAGTTTATATGGTTTATATGATTATTTTTAACTTTTGCAGTTGTTATCTTGTTGATGGGTCTATATCTGATAATTTAGTCTTTACACTTGTCTAATTTAGTCTTTAGTTTTTGTTTTTGGCTGTTTGTGATGTCGTTTTGGGTTTGTGTCTTATACTCTGTTCTCATGCTTCTGTGTAATGTCTCTTTGTTCTAGATGAATCAAGAGGCCATAAAATAAGCAGGGATTCATCTTTTCCTGAAGCTACAAAAGGAGGTACTGTCATATTTAGATATTGTTTTGTCCCCCTTGACAATAAATAATGCCCTAACATTCTTTTTGGGGTAATATATATAGGAAGATTGCGTTCACATGTAGATTGGGAGAAAAGAGAGAGACCTAATTTTAGCCGGCTAACATATAATGCCTCCCCTGGAAGAGCAGCTGCACTGGAAAATATTCCATTAAATAACGGGGTACGAATTTATTTGAATTGGAACTCGTTTTTTTGTTCATAGTTGTATATTCTTCCCACAGTGCTCTACTGTTATTACAATTTTTTTACAATGGCCTTTGGTCTTAGTATTAAAATCTTTAGTGTCCTTGTTCTGTTTCTCAACTCTTACCGTTGAACAGATTTGGTAGATTAGTTGTGACTTCTTTGAATTGCTTATTGTAGATTTCTCAACTCTTATTGCTCAACAGATTTTATAGATTAGTTGTGACTTCCTTGAATCAAACGATTGTAGATTATGAAAATAACAGGCCGACAAGTTAAATGAAATAATACTAATTTAAGTTTTTAACATCTCATGTGGTCTTGTGTTTGTTATATAGTCAATCAACTTACGGTTTTGTTCTCTTCCTTAATCTAATGTTTTTGACAGAGAGGATATCGTCGATCTCCTGAGAAAGAAACAGTATCACCTGCAAGTGATGAGGATACCATAGCAAATGTTCTACAACAACACGATCAATTTGTCAACTCAATGCAATCTCGGTCGGCAAAATTGCAAGTAAGGAGAACTTCCAATTCTACACCATTGCATGCTTACATTTGCAAAATATTTTACTCTTTTCTCATGCATTTATCATGTTATACGAGGTAGGATAGAGCAAGTTTGATGTTAAGTTATTATCAATGGCAATGTGACAATTTGCTTGCCTCTAGATAATCCCGCAAAAGGGAGGAATTCAAACTAAAGGAGTGGTCTATTATTATTTTTTTAATATTGTTATATATTAGGTTAAATTACAAATTTAGTCCCTCAAACGTAAAGTTTGTGTCTATTTGGCCCTTGAACTTTCAAAATCACAAATTTAGTCTGCATTTTCATATTTTTGAAAATTCGCAATCAATTAATTTTAAAAGATTTGAATTTCTCAAAGATTTATTAAGCACAAAATCGTAAGTCCGGGACCTATTAAAAGCTTAAATATTTGGGAACCAAATACAAACTTTAAAGTTCAGGACTACAATATTCTTTTTTAATCTCCTGGCACTTTTTATAGAACATAAATAGATAAGTTTTTTCAGAAATTTTCTTATTATTATTATTATCATCGTCATTTTTTAATTTAGAAAACTACATGAGTTGGCTCTTATAGGGGCATAAAATCATATGAGATTTTTGATAATTGCATGATGATCACTTCGGCTGCTATTTGTAGCCTGTGAATTGCTGCAGTTAAGTTTTTAACATAATATATCTGATGGTTTTTTAGGCAGTCTATAGACATTGGGAAAGACATGACATTAAAGGAGCGGTTTCTGCAATGGAGAAAATGGCTGATCATGCAGTAAGTATAATCTTGTTCTTTGAAGTTGAATGAACTTATTTTTCTTCTAATGTAAACTGTTCAAACACGTATTCCTATTGATATAGGTTGCTGCCGATGTAATTAGTATTATGACCAATAGAATTGAAGTTGTCACCCTGGACATCTGCACTTGTATTCTTCCAGTTCTCTCTGGCCTCCTTGAAAGTGACTTGGATAGGTCTCTCTCTCTCACACACACGCAGTTTTTTTTTCCACATTTTAATAAAAACTTTATGGTTTGTGTTTTTGGAAGACTTATTTTGCAACTTTTGTAGTCAAAACTCTTTTGAACCTACGACATTTACTAGATTTTAGTTCAAAAACGATTTGGATTTTGGTTTTTTCTTACATACGTTTCATTTCTGGAACAATAGGTATTTAGACATTTCTATGGAAATGCTAGTGAAGCTGGTGAGGACGTTTGGTTCAGTGATCTATTCTACGTTGTCGGCAACATCATCTGTTGGTGTAAACATTGAAGCAGAGCAAAGGTGTTTTTTGCCAATAAGCTTTAATTTATCATCATTATCATTATCCACCAGATTGTCCTTGCACTCTTTTTTCTAGAAATTATTTGTATTTAATTGAAATTGGCTGGTTTCTAGGTTGGAGCGATGCAATCTATGCTTCATCGAGCTCGAAAAAGTTAAGCGCTGCCTGCCAGCCCTTATTAGGTATGATACGAACTATATTAACCAATTCTAATTTAGCTAAGCACTTTATTATAAGTTATTTTATCTGAGAAGCACTAATTAAATCAAACAACGCACGGTATCTTTAGACTCTTTGCCTTCAAAGAGCACTCTAAACTTCTATTAGTAATGAAGGAAAACTTACCTACAGCCTGCAAACTGGAAATGTGGTCCATTCTTATGGTGACACGTGTTGAACATTTTGTTTTTAATTTTATATATTTTTATTTTTATACTCTTTTCTCATTTATATATTGCCATTCGTTTCTAATTAATCAATTAAATATTTTAAAGTATAAAATAATAAGGTGAGATGTTCTCATAACCTAAATCGGTGTTTCCTAAACATGTTTTTTAGTACATTTTTATTTCCTTTATTTTCTTTTTTCATCTACGCAACGTTGTATTTTCAACCAACCAATTGAATATTGAGAGTTAAAAACATCAACGTGAGAAATAATGTTATCCATTTATGTTTATTTACATATGTTAATCTATTTTACTTATTCGAGTAAAAGATAACATAGGCCTTTTTAAATCAAAATTGAAAGAAAATTATTTATAATTGACTATGTACTCGTAATTACCTAGTATTTCCTCTTATTGTTTAGGGTTTAAACAATAAAAGAGGCCTTTGCATAATTATGCAATTACTTTGAGAAACACTTTTTCCTTGGTTGCACCTACCTAGGAATTAATTCATTAGAAGTTTTCTTGACACCAAAATGTGGTGTGATCAAGGGGTTGTCTCGTGAGATCAACCGAGTTGCATTTAAGCTAGTCTAGATACTCATGGATATAAAAAGAACACTTTTTCCCTTTTTTCAAAACTTCTAACGATGATTGTGAAATCGGTGGTTCCGCAGAAAAAGGGGATCAGTAGCAAAGTCAGCACAGGAGTTGAATCTTGCACTTCAGGAATTTCAATGACATTAAAAACGAAGTAATCCGCTGCTGCTCTTCTCTGCTCTTTGCCATGAAAAGAGAGATCCCCCACACCCTTTCTTCTCTTCATATGCGATGCAACATATCATGAACATGAAATGGTGATATTCTTCTTTGACAATCTTTCCCATTTTCCCACTTCACTACTCACAATGCTTTCTTCCTTCCCCTTACTAGAAAAGTAAGTACGTAAAACAAAAGTACAGCCACAGGTACTTTTATTGACTGCTCTACTTTCGTTGACCCCTGCCTAATTCTGCACATACCCAAACAGGAGACCAAAACAAACAAAAAGAAAGGACAAATTAAGGGCTAATTTGTAGTAGAGGACTGTGTTTCGGTTTCGGTTTTGGAGAACCATCATCTTCATGAGCCACCCGTTCTATGTGGTGAAGGAGTTGAGTGAGTTACCTGACCCCCTAAAACTACCTTTGCTTTTTTTAACTTTTTCTTGGCTAACCCTTCCTATTCCCTAAATGTTGTGCACCACACACCATCTTCTTCATCTTATTTTGACCACGTTGTTTCTGAATATTGTTAGTTATGTTGTGGGTGTTGTTTATAATTAGTCCACTTATTCTCTCGTCTTGCTCTTTTGTTCGAGGGAGGGAAGGCTTTTTCTTGTAATACCACATATCCCCCTCTTTATGTAATCTTACTCACCAATTCATTAAATTTATATGCCCTTTTTTCTTTTCTAGTTATGCTGCCTGCTTGTCTTGCATCTCTTCATCTATTTTTGCATTATTGTCGACTCTCTT

mRNA sequence

GGGGACACAAAACGTGAAAGCGCCTCCCTCTCTTCTCTAATCAAATTCATTTTTTATTTCTTCTTTTTCGTTATTATTATTATTATTATTATTCTTTTTATTTTTTGAAATTGAGTTTTGGCCTTCTGTCCTTCTCTGTCCTTCTCTCTCTCTCTCTCTCTCTCTCGGAAGAGCTTTGCTTCGGCGGGATATGCCCATGGCGGTGCCGTCGTTGTTGTAAACAAAAATCCAAGTGTTTAATCGCCGCCGCCGCTGCCGCCTATACCGTCTCAGCAACTCCGACCGACGCCTCTAACTTCGAATTTCTCTTTTCTAATACTTGACGCTGTTTGGGGCTGGTGGTGGAAGAAAAGGTGGAGTTTGCTTTTGAGATCTAAGACGTTGTGAGTGGAGATCGTCGGTTCTTGGAAGTAGTTGATGAAGCAGTGTCACTAGTTATATTGCGCTATTCTCGGATTCAAATGTTTTGGGGAATCTGCACAGTGGAATGCTGTTGTTGCAATTCCAATTTCTAGGTTTTCTTCGCGTTCTGATGCTTTTGTGGTTCTAAATTCTTGGTTATACATGCCATGACTACCAAACGGGCGTACAAGCTACAAGAATTTGTGGCACATTCTTCCGCTGTCAATTGCCTGAAGATTGGAAGGAAGTCATCCCGTGTTCTTGTCACCGGAGGGGAAGACTTCAAAGTCAATCTCTGGGCTATTGGTAAACCCAATGCCATACTGAGTTTGACTGGCCATACGAGCGGAATAGATTCTGTAAGCTTTGACTCATCAGAAGTGTTGGTAGCTGCAGGGGCTGCTAGTGGCACAATCAAGCTTTGGGATTTGGAGGAGGCCAAAATTGTTCGAACGCTTACTGGTCATAGATCCAATTGCATTTCTGTGGATTTTCATCCCTTCGGGGAATTCTTTGCTTCTGGGTCTTTGGATACAAATCTTAAGATATGGGACATCAGGAAGAAAGGGTGTATCCACACATACAAAGGTCACACTCGAGGAGTCAATGCAATCAGATTTACACCAGATGGCCGTTGGGTTGTATCTGGTGGAGAAGACAACACAGTGAAGCTCTGGGATTTAACTGCTGGAAAGTTGTTGCATGATTTTAAGTGCCACGAGGGTCAGGTTCAATGTATAGACTTTCACCCTCATGAATTTTTGCTAGCAACAGGTTCAGCAGATAAAACAGTTAAATTTTGGGACCTGGAAACCTTTGAGTTGATTGGTTCCGCTGGACCTGAGACCAGTGGAGTCCGTTGTTTAACATTTAATCCTGATGGGAGGACATTGCTTTGCGGATTGCATGAAAGTTTGAAGGTTTTCTCATGGGAACCAATAAGATGTCATGACGGTGTGGAAGTTGGTTGGTCTAGGCTGTCTGATCTTAGTGTTCATGAGGGGAAACTTCTTGGTTGTTCGTACAATCAGAGCTGTGTTGGAGTGTGGGTTGTAGATATTACGCGGACAGAGCCCTATGCAGTTAACAATGCTAACAGACTAAATGGCCGATCAGAACCTAAATCCAGCAGTCATCTACAAAATGAGAACAATACCAAGACTGGTTTTTGTGGATTGTCGGTCTCACAAACTTCTGATCCACTATTAAAGGAGACCAAAACATTGGGAAGGTTGTCAGTTTCTCAAAATTCAGATGTTGCCAAGGATCCAAAATCTTTGTCGTCCACAGGAAATGGACCAAGTACTCCTCAAAAGATCAATTTAAATGCTGGCTCAAAAACTAATTTGGTTACCTCAGCAGCAGTACCTAGTGCAGTGGTGCCGAAGAGAAACTCTGTGAAGGCTACTTCAACATTCAACAATCCAATCTTCAATAAGTCAGATGTGATACCTGTAATCGTACCCAGGACAAGTTCAAGGCATGAGCAGGATGATTCTAGAAAGGAGTTTGATGTTGCTGGAAGAGCAGGCCCCATATCAAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAGGAGTTTGATGTTGCTGGAAGAGCAGTCACCGTATCAAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAAGAATTTGATGTTGCTGGAAGAGTAATGCCACTGTCCAGGACAAATTCAAGGCACGAGCAGGATGATTCAAGAAAGGAATGCGACATTACTGGAAGAACAGTTCCAGCACCATCGCTATCGAAAACTACCGATAACAGGAGGTTTCCCAATAGTAGAGATGAAGTTGATAATTCAACTATCTCTGTGCTTTCTGAATCCAGAGGTCTGAAGGCAAATGACATGAGCGCCATTGCAGATAATAGGAATTCCTTGCATGGCATTGGTTCATTTCAAGGAGTATCTGCTCCACAGAAGATTGTGAAAGAAGAAAGATATATTGGATCTGGCAAGACTGAAACAGAAACAAAAGATACAACAGCAAACTACAAGCACGAAGATGAATCAAGAGGCCATAAAATAAGCAGGGATTCATCTTTTCCTGAAGCTACAAAAGGAGGAAGATTGCGTTCACATGTAGATTGGGAGAAAAGAGAGAGACCTAATTTTAGCCGGCTAACATATAATGCCTCCCCTGGAAGAGCAGCTGCACTGGAAAATATTCCATTAAATAACGGGAGAGGATATCGTCGATCTCCTGAGAAAGAAACAGTATCACCTGCAAGTGATGAGGATACCATAGCAAATGTTCTACAACAACACGATCAATTTGTCAACTCAATGCAATCTCGGTCGGCAAAATTGCAAGCAGTCTATAGACATTGGGAAAGACATGACATTAAAGGAGCGGTTTCTGCAATGGAGAAAATGGCTGATCATGCAGTTGCTGCCGATGTAATTAGTATTATGACCAATAGAATTGAAGTTGTCACCCTGGACATCTGCACTTGTATTCTTCCAGTTCTCTCTGGCCTCCTTGAAAGTGACTTGGATAGGTATTTAGACATTTCTATGGAAATGCTAGTGAAGCTGGTGAGGACGTTTGGTTCAGTGATCTATTCTACGTTGTCGGCAACATCATCTGTTGGTGTAAACATTGAAGCAGAGCAAAGGTTGGAGCGATGCAATCTATGCTTCATCGAGCTCGAAAAAGTTAAGCGCTGCCTGCCAGCCCTTATTAGAAAAAGGGGATCAGTAGCAAAGTCAGCACAGGAGTTGAATCTTGCACTTCAGGAATTTCAATGACATTAAAAACGAAGTAATCCGCTGCTGCTCTTCTCTGCTCTTTGCCATGAAAAGAGAGATCCCCCACACCCTTTCTTCTCTTCATATGCGATGCAACATATCATGAACATGAAATGGTGATATTCTTCTTTGACAATCTTTCCCATTTTCCCACTTCACTACTCACAATGCTTTCTTCCTTCCCCTTACTAGAAAAGTAAGTACGTAAAACAAAAGTACAGCCACAGGTACTTTTATTGACTGCTCTACTTTCGTTGACCCCTGCCTAATTCTGCACATACCCAAACAGGAGACCAAAACAAACAAAAAGAAAGGACAAATTAAGGGCTAATTTGTAGTAGAGGACTGTGTTTCGGTTTCGGTTTTGGAGAACCATCATCTTCATGAGCCACCCGTTCTATGTGGTGAAGGAGTTGAGTGAGTTACCTGACCCCCTAAAACTACCTTTGCTTTTTTTAACTTTTTCTTGGCTAACCCTTCCTATTCCCTAAATGTTGTGCACCACACACCATCTTCTTCATCTTATTTTGACCACGTTGTTTCTGAATATTGTTAGTTATGTTGTGGGTGTTGTTTATAATTAGTCCACTTATTCTCTCGTCTTGCTCTTTTGTTCGAGGGAGGGAAGGCTTTTTCTTGTAATACCACATATCCCCCTCTTTATGTAATCTTACTCACCAATTCATTAAATTTATATGCCCTTTTTTCTTTTCTAGTTATGCTGCCTGCTTGTCTTGCATCTCTTCATCTATTTTTGCATTATTGTCGACTCTCTT

Coding sequence (CDS)

ATGACTACCAAACGGGCGTACAAGCTACAAGAATTTGTGGCACATTCTTCCGCTGTCAATTGCCTGAAGATTGGAAGGAAGTCATCCCGTGTTCTTGTCACCGGAGGGGAAGACTTCAAAGTCAATCTCTGGGCTATTGGTAAACCCAATGCCATACTGAGTTTGACTGGCCATACGAGCGGAATAGATTCTGTAAGCTTTGACTCATCAGAAGTGTTGGTAGCTGCAGGGGCTGCTAGTGGCACAATCAAGCTTTGGGATTTGGAGGAGGCCAAAATTGTTCGAACGCTTACTGGTCATAGATCCAATTGCATTTCTGTGGATTTTCATCCCTTCGGGGAATTCTTTGCTTCTGGGTCTTTGGATACAAATCTTAAGATATGGGACATCAGGAAGAAAGGGTGTATCCACACATACAAAGGTCACACTCGAGGAGTCAATGCAATCAGATTTACACCAGATGGCCGTTGGGTTGTATCTGGTGGAGAAGACAACACAGTGAAGCTCTGGGATTTAACTGCTGGAAAGTTGTTGCATGATTTTAAGTGCCACGAGGGTCAGGTTCAATGTATAGACTTTCACCCTCATGAATTTTTGCTAGCAACAGGTTCAGCAGATAAAACAGTTAAATTTTGGGACCTGGAAACCTTTGAGTTGATTGGTTCCGCTGGACCTGAGACCAGTGGAGTCCGTTGTTTAACATTTAATCCTGATGGGAGGACATTGCTTTGCGGATTGCATGAAAGTTTGAAGGTTTTCTCATGGGAACCAATAAGATGTCATGACGGTGTGGAAGTTGGTTGGTCTAGGCTGTCTGATCTTAGTGTTCATGAGGGGAAACTTCTTGGTTGTTCGTACAATCAGAGCTGTGTTGGAGTGTGGGTTGTAGATATTACGCGGACAGAGCCCTATGCAGTTAACAATGCTAACAGACTAAATGGCCGATCAGAACCTAAATCCAGCAGTCATCTACAAAATGAGAACAATACCAAGACTGGTTTTTGTGGATTGTCGGTCTCACAAACTTCTGATCCACTATTAAAGGAGACCAAAACATTGGGAAGGTTGTCAGTTTCTCAAAATTCAGATGTTGCCAAGGATCCAAAATCTTTGTCGTCCACAGGAAATGGACCAAGTACTCCTCAAAAGATCAATTTAAATGCTGGCTCAAAAACTAATTTGGTTACCTCAGCAGCAGTACCTAGTGCAGTGGTGCCGAAGAGAAACTCTGTGAAGGCTACTTCAACATTCAACAATCCAATCTTCAATAAGTCAGATGTGATACCTGTAATCGTACCCAGGACAAGTTCAAGGCATGAGCAGGATGATTCTAGAAAGGAGTTTGATGTTGCTGGAAGAGCAGGCCCCATATCAAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAGGAGTTTGATGTTGCTGGAAGAGCAGTCACCGTATCAAGGACAAATTCAAGGCATGAGCAGGATGATTCTAGAAAAGAATTTGATGTTGCTGGAAGAGTAATGCCACTGTCCAGGACAAATTCAAGGCACGAGCAGGATGATTCAAGAAAGGAATGCGACATTACTGGAAGAACAGTTCCAGCACCATCGCTATCGAAAACTACCGATAACAGGAGGTTTCCCAATAGTAGAGATGAAGTTGATAATTCAACTATCTCTGTGCTTTCTGAATCCAGAGGTCTGAAGGCAAATGACATGAGCGCCATTGCAGATAATAGGAATTCCTTGCATGGCATTGGTTCATTTCAAGGAGTATCTGCTCCACAGAAGATTGTGAAAGAAGAAAGATATATTGGATCTGGCAAGACTGAAACAGAAACAAAAGATACAACAGCAAACTACAAGCACGAAGATGAATCAAGAGGCCATAAAATAAGCAGGGATTCATCTTTTCCTGAAGCTACAAAAGGAGGAAGATTGCGTTCACATGTAGATTGGGAGAAAAGAGAGAGACCTAATTTTAGCCGGCTAACATATAATGCCTCCCCTGGAAGAGCAGCTGCACTGGAAAATATTCCATTAAATAACGGGAGAGGATATCGTCGATCTCCTGAGAAAGAAACAGTATCACCTGCAAGTGATGAGGATACCATAGCAAATGTTCTACAACAACACGATCAATTTGTCAACTCAATGCAATCTCGGTCGGCAAAATTGCAAGCAGTCTATAGACATTGGGAAAGACATGACATTAAAGGAGCGGTTTCTGCAATGGAGAAAATGGCTGATCATGCAGTTGCTGCCGATGTAATTAGTATTATGACCAATAGAATTGAAGTTGTCACCCTGGACATCTGCACTTGTATTCTTCCAGTTCTCTCTGGCCTCCTTGAAAGTGACTTGGATAGGTATTTAGACATTTCTATGGAAATGCTAGTGAAGCTGGTGAGGACGTTTGGTTCAGTGATCTATTCTACGTTGTCGGCAACATCATCTGTTGGTGTAAACATTGAAGCAGAGCAAAGGTTGGAGCGATGCAATCTATGCTTCATCGAGCTCGAAAAAGTTAAGCGCTGCCTGCCAGCCCTTATTAGAAAAAGGGGATCAGTAGCAAAGTCAGCACAGGAGTTGAATCTTGCACTTCAGGAATTTCAATGA

Protein sequence

MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITRTEPYAVNNANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQNSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNPIFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAVTVSRTNSRHEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECDITGRTVPAPSLSKTTDNRRFPNSRDEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEERYIGSGKTETETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSRLTYNASPGRAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRSAKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGLLESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKVKRCLPALIRKRGSVAKSAQELNLALQEFQ

Homology

[Close]

BLAST of Cmc10g0271241 vs. NCBI nr
Match: XP_008445914.1 (PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 1721.8 bits (4458), Expect = 0.0e+00
Identity = 867/869 (99.77%), Postives = 869/869 (100.00%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR
Sbjct: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITR 300
           TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDL+VHEGKLLGCSYNQSCVGVWVVDITR
Sbjct: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDITR 300

Query: 301 TEPYAVNNANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQ 360
           TEPYAVNNANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQ
Sbjct: 301 TEPYAVNNANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQ 360

Query: 361 NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNP 420
           NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNP
Sbjct: 361 NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNP 420

Query: 421 IFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAV 480
           IFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAV
Sbjct: 421 IFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAV 480

Query: 481 TVSRTNSRHEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECDITGRTVPAPSLSKTTD 540
           TVSRTNSRHEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECD+TGRTVPAPSLSKTTD
Sbjct: 481 TVSRTNSRHEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECDVTGRTVPAPSLSKTTD 540

Query: 541 NRRFPNSRDEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEER 600
           NRRFPNSRDEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEER
Sbjct: 541 NRRFPNSRDEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEER 600

Query: 601 YIGSGKTETETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSR 660
           YIGSGKTETETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSR
Sbjct: 601 YIGSGKTETETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSR 660

Query: 661 LTYNASPGRAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRS 720
           LTYNASPGRAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRS
Sbjct: 661 LTYNASPGRAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRS 720

Query: 721 AKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGL 780
           AKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGL
Sbjct: 721 AKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGL 780

Query: 781 LESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKV 840
           LESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKV
Sbjct: 781 LESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKV 840

Query: 841 KRCLPALIRKRGSVAKSAQELNLALQEFQ 870
           KRCLPALIRKRGSVAKSAQELNLALQEFQ
Sbjct: 841 KRCLPALIRKRGSVAKSAQELNLALQEFQ 869

[Close]

BLAST of Cmc10g0271241 vs. NCBI nr
Match: KAA0034099.1 (katanin p80 WD40 repeat-containing subunit B1-like protein isoform X1 [Cucumis melo var. makuwa] >TYK15820.1 katanin p80 WD40 repeat-containing subunit B1-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1704.9 bits (4414), Expect = 0.0e+00
Identity = 858/861 (99.65%), Postives = 861/861 (100.00%), Query Frame = 0


Query: 9   LQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGIDSVSFD 68
           L+EFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGIDSVSFD
Sbjct: 40  LEEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGIDSVSFD 99

Query: 69  SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
           SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW
Sbjct: 100 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 159

Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQV 188
           DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQV
Sbjct: 160 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQV 219

Query: 189 QCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
           QCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE
Sbjct: 220 QCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE 279

Query: 249 SLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITRTEPYAVNN 308
           SLKVFSWEPIRCHDGVEVGWSRLSDL+VHEGKLLGCSYNQSCVGVWVVDITRTEPYAVNN
Sbjct: 280 SLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDITRTEPYAVNN 339

Query: 309 ANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQNSDVAKDP 368
           ANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQNSDVAKDP
Sbjct: 340 ANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQNSDVAKDP 399

Query: 369 KSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNPIFNKSDVI 428
           KSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNPIFNKSDVI
Sbjct: 400 KSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNPIFNKSDVI 459

Query: 429 PVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAVTVSRTNSR 488
           PVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAVTVSRTNSR
Sbjct: 460 PVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAVTVSRTNSR 519

Query: 489 HEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECDITGRTVPAPSLSKTTDNRRFPNSR 548
           HEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECD+TGRTVPAPSLSKTTDNRRFPNSR
Sbjct: 520 HEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECDVTGRTVPAPSLSKTTDNRRFPNSR 579

Query: 549 DEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEERYIGSGKTE 608
           DEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEERYIGSGKTE
Sbjct: 580 DEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEERYIGSGKTE 639

Query: 609 TETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSRLTYNASPG 668
           TETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSRLTYNASPG
Sbjct: 640 TETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSRLTYNASPG 699

Query: 669 RAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRSAKLQAVYR 728
           RAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRSAKLQAVYR
Sbjct: 700 RAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRSAKLQAVYR 759

Query: 729 HWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGLLESDLDRY 788
           HWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGLLESDLDRY
Sbjct: 760 HWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGLLESDLDRY 819

Query: 789 LDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKVKRCLPALI 848
           LDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKVKRCLPALI
Sbjct: 820 LDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKVKRCLPALI 879

Query: 849 RKRGSVAKSAQELNLALQEFQ 870
           RKRGSVAKSAQELNLALQEFQ
Sbjct: 880 RKRGSVAKSAQELNLALQEFQ 900

[Close]

BLAST of Cmc10g0271241 vs. NCBI nr
Match: XP_008445915.1 (PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 1658.3 bits (4293), Expect = 0.0e+00
Identity = 842/869 (96.89%), Postives = 844/869 (97.12%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR
Sbjct: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITR 300
           TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDL+VHEGKLLGCSYNQSCVGVWVVDITR
Sbjct: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDITR 300

Query: 301 TEPYAVNNANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQ 360
           TEPYAVNNANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQ
Sbjct: 301 TEPYAVNNANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQ 360

Query: 361 NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNP 420
           NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNP
Sbjct: 361 NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNP 420

Query: 421 IFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAV 480
           IFNKSDVIPVIVPRTS                         SRHEQDDSRKEFDVAGRAV
Sbjct: 421 IFNKSDVIPVIVPRTS-------------------------SRHEQDDSRKEFDVAGRAV 480

Query: 481 TVSRTNSRHEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECDITGRTVPAPSLSKTTD 540
           TVSRTNSRHEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECD+TGRTVPAPSLSKTTD
Sbjct: 481 TVSRTNSRHEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECDVTGRTVPAPSLSKTTD 540

Query: 541 NRRFPNSRDEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEER 600
           NRRFPNSRDEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEER
Sbjct: 541 NRRFPNSRDEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEER 600

Query: 601 YIGSGKTETETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSR 660
           YIGSGKTETETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSR
Sbjct: 601 YIGSGKTETETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSR 660

Query: 661 LTYNASPGRAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRS 720
           LTYNASPGRAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRS
Sbjct: 661 LTYNASPGRAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRS 720

Query: 721 AKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGL 780
           AKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGL
Sbjct: 721 AKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGL 780

Query: 781 LESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKV 840
           LESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKV
Sbjct: 781 LESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKV 840

Query: 841 KRCLPALIRKRGSVAKSAQELNLALQEFQ 870
           KRCLPALIRKRGSVAKSAQELNLALQEFQ
Sbjct: 841 KRCLPALIRKRGSVAKSAQELNLALQEFQ 844

[Close]

BLAST of Cmc10g0271241 vs. NCBI nr
Match: XP_011655511.1 (katanin p80 WD40 repeat-containing subunit B1 homolog [Cucumis sativus] >KGN51580.1 hypothetical protein Csa_007902 [Cucumis sativus])

HSP 1 Score: 1617.1 bits (4186), Expect = 0.0e+00
Identity = 823/869 (94.71%), Postives = 828/869 (95.28%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR
Sbjct: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITR 300
           TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDL+VHEGKLLGCSYNQSCVGVWVVDITR
Sbjct: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDITR 300

Query: 301 TEPYAVNNANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQ 360
           TEPYAVNNANRLNGR EPKSSSHLQNENNTKT F GLSVSQTSD LLKETKTLGRLSVSQ
Sbjct: 301 TEPYAVNNANRLNGRPEPKSSSHLQNENNTKTSFGGLSVSQTSDALLKETKTLGRLSVSQ 360

Query: 361 NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNP 420
           NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLV+SAAVPSAVVPKRNSVKATSTFNNP
Sbjct: 361 NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVSSAAVPSAVVPKRNSVKATSTFNNP 420

Query: 421 IFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAV 480
           IFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRA P                        
Sbjct: 421 IFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAVP------------------------ 480

Query: 481 TVSRTNSRHEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECDITGRTVPAPSLSKTTD 540
            VSRTNSR EQDDSRKEFDVA RVMPLSR+NSRHEQDDSRKECD+ GR  PAP LSKTTD
Sbjct: 481 -VSRTNSRQEQDDSRKEFDVAARVMPLSRSNSRHEQDDSRKECDVAGRAAPAPLLSKTTD 540

Query: 541 NRRFPNSRDEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEER 600
           NRRFPNSRDEVDN TISVLSESRGLKANDMS IADNRNSLHGIGS QGVSAPQKIVKEER
Sbjct: 541 NRRFPNSRDEVDNPTISVLSESRGLKANDMSTIADNRNSLHGIGSIQGVSAPQKIVKEER 600

Query: 601 YIGSGKTETETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSR 660
           YIGSGK ETETKDTTANYKHEDESRGHKISRD+SFPEATKGGRLRSHVDWEKRERPNFSR
Sbjct: 601 YIGSGKNETETKDTTANYKHEDESRGHKISRDASFPEATKGGRLRSHVDWEKRERPNFSR 660

Query: 661 LTYNASPGRAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRS 720
           LTYNASPGRAAALENIPLNNGRGYR SPEKETVSPASDEDTIANVLQQHDQFVNSMQSRS
Sbjct: 661 LTYNASPGRAAALENIPLNNGRGYRPSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRS 720

Query: 721 AKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGL 780
           AKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGL
Sbjct: 721 AKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGL 780

Query: 781 LESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKV 840
           LESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKV
Sbjct: 781 LESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKV 840

Query: 841 KRCLPALIRKRGSVAKSAQELNLALQEFQ 870
           KRCLPALIRKRGSVAKSAQELNLALQEFQ
Sbjct: 841 KRCLPALIRKRGSVAKSAQELNLALQEFQ 844

[Close]

BLAST of Cmc10g0271241 vs. NCBI nr
Match: XP_022966957.1 (katanin p80 WD40 repeat-containing subunit B1 homolog isoform X2 [Cucurbita maxima])

HSP 1 Score: 1572.0 bits (4069), Expect = 0.0e+00
Identity = 789/872 (90.48%), Postives = 831/872 (95.30%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR
Sbjct: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITR 300
           TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDL+VHEGKLLGCSYNQ+CVGVWVVDITR
Sbjct: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITR 300

Query: 301 TEPYAVNNANRLNGRSEPKSSSH--LQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSV 360
           TEPYA+NN NRLNGRSEPKSSS+  LQNENN K  F GLSVSQTSDPLLKETKTLGRLSV
Sbjct: 301 TEPYAINNVNRLNGRSEPKSSSNLSLQNENNAKANFGGLSVSQTSDPLLKETKTLGRLSV 360

Query: 361 SQNSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFN 420
           SQN+DV KDPK LSSTGNGPSTPQ+++ NAG K N V+S AVP+AVVPKRNSVKATSTFN
Sbjct: 361 SQNTDV-KDPKPLSSTGNGPSTPQRVSSNAGPKANSVSSVAVPNAVVPKRNSVKATSTFN 420

Query: 421 NPIFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGR 480
           NPIFNKSDVIPVIVPRT+SRHEQDDSRK+FDVAGRA P+ RTNSRHEQDDSRKE DVAGR
Sbjct: 421 NPIFNKSDVIPVIVPRTNSRHEQDDSRKDFDVAGRAMPLPRTNSRHEQDDSRKELDVAGR 480

Query: 481 AVTVSRTNSRHEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECDITGRTVPAPSLSKT 540
           A+ + RTNSRHEQDDSRKE DVAGR MPLSRTNSRHEQDDSRKE D+ GR VPAP LSKT
Sbjct: 481 AMPLPRTNSRHEQDDSRKELDVAGRAMPLSRTNSRHEQDDSRKELDVAGRAVPAPLLSKT 540

Query: 541 TD-NRRFPNSRDEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVK 600
           TD NRRFP+ RDEVDNSTIS+LSESRGLKA DMS IADNRNSLHGIGS QG SAPQKIVK
Sbjct: 541 TDTNRRFPSGRDEVDNSTISILSESRGLKAADMSNIADNRNSLHGIGSIQGASAPQKIVK 600

Query: 601 EERYIGSGKTETETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPN 660
           EER+IGSGK ETETK++TA+YKHEDES+GHKISRD +FPEAT+GGR+RS VDWEKRER N
Sbjct: 601 EERHIGSGKNETETKESTASYKHEDESQGHKISRDGAFPEATRGGRMRSRVDWEKRERAN 660

Query: 661 FSRLTYNASPGRAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQ 720
           FSR T+NASPGRAAAL++ PLNNGRGYRRSP+KETV+P SDED IAN+LQQHDQF+N MQ
Sbjct: 661 FSRSTFNASPGRAAALDSFPLNNGRGYRRSPDKETVAPTSDEDIIANILQQHDQFINLMQ 720

Query: 721 SRSAKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVL 780
           SRSAKLQAVYR+WERHDIKGAVSAMEKMADHAVAADVISI+T++IEV+TLDIC+CILPVL
Sbjct: 721 SRSAKLQAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTDKIEVITLDICSCILPVL 780

Query: 781 SGLLESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIEL 840
           S LLESDLDR+LDI+MEML+KLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIEL
Sbjct: 781 SSLLESDLDRFLDIAMEMLLKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIEL 840

Query: 841 EKVKRCLPALIRKRGSVAKSAQELNLALQEFQ 870
           EKVKRCLPALIRKRGSVAKSAQELNLALQEFQ
Sbjct: 841 EKVKRCLPALIRKRGSVAKSAQELNLALQEFQ 871

[Close]

BLAST of Cmc10g0271241 vs. ExPASy Swiss-Prot
Match: Q8H0T9 (Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4 OS=Arabidopsis thaliana OX=3702 GN=KTN80.4 PE=1 SV=3)

HSP 1 Score: 873.2 bits (2255), Expect = 2.4e-252
Identity = 495/917 (53.98%), Postives = 608/917 (66.30%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHS+AVNCLKIGRKSSRVLVTGGED KVNLWAIGKPNAILSL GH+S
Sbjct: 1   MTTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSV+FD+SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVN +RFTPDGRWVVSGGEDN VK+WDLTAGKLL +
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FK HEGQ+Q +DFHPHEFLLATGSAD+TVKFWDLETFELIGS GPET+GVRCL+FNPDG+
Sbjct: 181 FKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGK 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITR 300
           T+LCGL ESLK+FSWEPIRCHDGV+VGWSRLSD++VHEGKLLGCSYNQSCVGVWVVD++R
Sbjct: 241 TVLCGLQESLKIFSWEPIRCHDGVDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSR 300

Query: 301 TEPYAVNNANRLNGRSEPKSSSH----LQNENNTKTGFCGLSVSQTSDPLLKETKT---- 360
           TEP    +  + NG  E +S S     + N+NN+KT    LSVSQ  DPLLKETK+    
Sbjct: 301 TEPCMAGDTAQSNGHPEKRSCSGRDPVVLNDNNSKTVLGKLSVSQNVDPLLKETKSLGRL 360

Query: 361 ----------------------------------LGRLSVSQNSDVAKDPKSLSSTGNGP 420
                                             LGRLSVSQNSDV+K+ ++ SSTG+ P
Sbjct: 361 SVSQNSDPSTKETKSIGRSSTSQNSESSMKESKPLGRLSVSQNSDVSKESRTFSSTGSLP 420

Query: 421 STPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNPIFNKSDVIPVIVPRTSSR 480
            TP +++    SK     S AV +A   +RN  KA     NP+   +D  PVIVPR   R
Sbjct: 421 GTPHRVSSTNVSKATSGVSTAVSNAATSRRNFTKANPK-ANPVNKAADFAPVIVPRADPR 480

Query: 481 HEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAVTVSRTNSRHEQDDSRKEF 540
            EQ                                                   +SR E 
Sbjct: 481 IEQ-------------------------------------------------ATESRAEL 540

Query: 541 DVAGRVMPLSRTNSRHEQDDSRKECDITGRTVPAPSLSKTTDNRRFPNSRDEVDNSTISV 600
           D+  R MP S                            +  D+RR P+SR+  D    SV
Sbjct: 541 DIIARTMPYS---------------------------LQAADSRRSPSSRNNPDLPDASV 600

Query: 601 L--SESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEERYIGSGKTETETKDTTA 660
           L  SES+ ++ N+   I D      G    +G  A ++ + + RY   G++ + ++  + 
Sbjct: 601 LEMSESQPVEPNN---IPDGGTLPGGKVGMRG--ATERSINDFRYKRYGRSNSRSRMGSP 660

Query: 661 NYKHED--ESRGHKISRDSSFPEATKGGRLRSHV-DWEKRER-PNFSRLTYNASPGRAAA 720
              H++  +   H+ +RD S  E+ KGGR +S V + E+R R  NF     N S G   A
Sbjct: 661 PRNHDENYDLVSHRSNRDPSPTESQKGGRFQSLVINRERRGRFSNFEGPVSNFSSGNMPA 720

Query: 721 LENIPLN--NGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRSAKLQAVYRHW 780
               P N    RG    P ++ +   S+E+ + +++ +H+QFV+SMQSR AKLQ V R+W
Sbjct: 721 PNIRPSNMFKQRG-NHMPVEQGIDSPSEENIVEDIMGKHNQFVSSMQSRLAKLQVVRRYW 780

Query: 781 ERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGLLESDLDRYLD 840
           ER+D+K ++ ++EKMAD+AV ADV+ I+T R E++TLD CT +LP+L+ LL S +D++L 
Sbjct: 781 ERNDVKNSIGSIEKMADNAVTADVLGIITERNEILTLDNCTSLLPLLTALLGSGMDQHLS 834

Query: 841 ISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKVKRCLPALIRK 868
           +S+++L+KLVR +GS IYS+LSA +SVGV+IEAEQR+ER + CF+ELEKVK CLP+L R+
Sbjct: 841 VSLDLLLKLVRLYGSPIYSSLSAPASVGVDIEAEQRIERYSRCFVELEKVKACLPSLARR 834

[Close]

BLAST of Cmc10g0271241 vs. ExPASy Swiss-Prot
Match: F4KB17 (Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3 OS=Arabidopsis thaliana OX=3702 GN=KTN80.3 PE=1 SV=1)

HSP 1 Score: 860.5 bits (2222), Expect = 1.6e-248
Identity = 484/913 (53.01%), Postives = 591/913 (64.73%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           M TKRAYKLQEFVAHS+AVNCLKIGRKSSRVLVTGGED KVNLWAIGKPNAILSL GH+S
Sbjct: 1   MNTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSV+FD+SE LVAAGAASGTIKLWDLEEAK+VRTLTGHRSNC+SV+FHPFGEFFASGS
Sbjct: 61  GIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVN +RFTPDGRW+VSGGEDN VK+WDLTAGKLLH+
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHE 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FK HEG++Q +DFHPHEFLLATGSADKTVKFWDLETFELIGS G ET+GVRCLTFNPDG+
Sbjct: 181 FKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGK 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITR 300
           ++LCGL ESLK+FSWEPIRCHDGV+VGWS LSD++VHEGKLLGCSYNQ+CVGVWVVD++R
Sbjct: 241 SVLCGLQESLKIFSWEPIRCHDGVDVGWSNLSDMNVHEGKLLGCSYNQNCVGVWVVDLSR 300

Query: 301 TEPYAVNNANRLNGRSEPKSSSHLQ----NENNTKTGFCGLSVSQTSDPLLKETKTLGRL 360
           TEP +   A + N   E  S S       N+N++K     L  SQ  DPLLKETK+LG+L
Sbjct: 301 TEPMS-GGATQSNSHPEKTSGSGRDQAGLNDNSSKVILGKLPGSQKVDPLLKETKSLGKL 360

Query: 361 SVSQNSD--------------------VAKDPK------------------SLSSTGNGP 420
           SVSQNSD                    + K+PK                  +LSSTG+  
Sbjct: 361 SVSQNSDPLPKDTKSTGRSSVSQSSDPLVKEPKPLGRFSATHSSDTVKESRTLSSTGSVS 420

Query: 421 STPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNPIFNKSDVIPVIVPRTSSR 480
            +P ++ L +  K+    S  VP+A   KRN  KA    N P+ NK D  PVIVPRT   
Sbjct: 421 DSPHRVTLTSAPKSASGISTVVPNAAASKRNFGKANPKANPPVVNKEDYFPVIVPRTEPI 480

Query: 481 HEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAVTVSRTNSRHEQDDSRKEF 540
            EQ                                                         
Sbjct: 481 IEQ--------------------------------------------------------- 540

Query: 541 DVAGRVMPLSRTNSRHEQDDSRKECDITGRTVPAPSLSKTTDNRRFPNSRDEVDNSTISV 600
                              +SR E DI GRT+P    SK  D+RR  +SR+E D  T S+
Sbjct: 541 -----------------ASESRAELDIIGRTMPYSLQSKAADSRRLSSSRNEPDLPTSSL 600

Query: 601 LSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEERYIGSGKTETETKDTTANY 660
           L  S+      ++    N       GS+       K  K  R  G   + +  +    N+
Sbjct: 601 LERSQSQPIEPITLQDGNTYPSDEGGSWDTAERTNKESK-CRVFGRFNSRSLVRSPPRNH 660

Query: 661 KHEDESRGHKISRDSSFPEATKGGRLRSHV-DWEKRER-PNFSRLTYNASPGRAAALENI 720
               +   +  +RDSS  E+ KGGRL S V + E+R R  NF     ++S G   A  + 
Sbjct: 661 DENSDLISYNANRDSSPTESRKGGRLHSLVLNRERRGRFSNFEGPVSSSSGGNMTAPNSR 720

Query: 721 PLN--NGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRSAKLQAVYRHWERHD 780
           P N    RG    P  + ++ AS+ED +A+++ QHDQFV+SM SR AKLQ V R+WER+D
Sbjct: 721 PSNMLKQRG-NHVPVDQGITSASEEDIVADIMGQHDQFVSSMHSRLAKLQVVRRYWERND 780

Query: 781 IKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGLLESDLDRYLDISME 840
           IK ++S++EKMAD+AV ADV+ I+  R E++TLD CT +LP+L+ LL S++D +L + ++
Sbjct: 781 IKNSISSIEKMADNAVIADVLLIVNERPEILTLDTCTSLLPLLTALLGSNMDSHLSVCLD 836

Query: 841 MLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKVKRCLPALIRKRGSV 868
           +L+KLVR +GS IYS+LSA SSVGV+IEAEQR+ER + CF+E EK+K CLP+L R+   V
Sbjct: 841 LLLKLVRMYGSQIYSSLSAPSSVGVDIEAEQRMERYSCCFVEFEKIKACLPSLARRGNLV 836

[Close]

BLAST of Cmc10g0271241 vs. ExPASy Swiss-Prot
Match: A0A1P8AW69 (Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1 OS=Arabidopsis thaliana OX=3702 GN=KTN80.1 PE=1 SV=1)

HSP 1 Score: 581.3 bits (1497), Expect = 1.9e-164
Identity = 382/1026 (37.23%), Postives = 536/1026 (52.24%), Query Frame = 0


Query: 4    KRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGID 63
            KR YKLQEFVAHS  VNCL IG+K+SR+L+TGG+D+KVNLW+IGK  + +SL GHTS +D
Sbjct: 3    KRGYKLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVD 62

Query: 64   SVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
            SV+F+S EVLV AGA+SG IKLWDLEE+K+VR  TGHRSNC +V+FHPFGEF ASGS DT
Sbjct: 63   SVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDT 122

Query: 124  NLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC 183
            NL++WD RKKGCI TYKGHTRG++ I F+PDGRWVVSGG DN VK+WDLTAGKLLH+FKC
Sbjct: 123  NLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKC 182

Query: 184  HEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL 243
            HEG ++ +DFHP EFLLATGSAD+TVKFWDLETFELIG+  PE +GVR + F+PDG+TL 
Sbjct: 183  HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLF 242

Query: 244  CGLHESLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITRTEP 303
            CGL + LKV+SWEP+ C DGV++GWS L D  ++EGK +GCSY ++ VG+WV DI+  EP
Sbjct: 243  CGLDDGLKVYSWEPVICRDGVDMGWSTLGDFCINEGKFIGCSYYRNSVGIWVSDISELEP 302

Query: 304  YAVNNANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTL----GRLSVS 363
            Y   + ++       K  S L N+ + + G  G   S + D   +E K +    G L+V+
Sbjct: 303  YGAVSEDK--NECMVKRFSVL-NDQSERMG-SGPRGSVSPDYETREIKNIYVDCGNLNVA 362

Query: 364  QNSDVAKDPKSLSSTGNGPSTPQKINL----NAGSKTNLVT--SAAVPSAVVPKRNSVKA 423
            QN    K    L S        +K N      AG K +  +  S +   +   +R S+  
Sbjct: 363  QNPGSLKATLPLESGKVATMVSEKQNAAYFGPAGDKYSSTSRDSDSGEESSYSERESIPF 422

Query: 424  TSTFNNPIFNKSDVIPVIVPRTSSRHE---QDDSRKEFDVAGRAGPISRTNSRHEQDDSR 483
            + T +  +   + V   +     S+     Q  +RK+  +A    P ++     EQ+ S 
Sbjct: 423  SRTKSGMLLRPAHVRKTLAKFEESKQSAVVQSATRKKSGLAVEEEPQTQNAFLSEQNAS- 482

Query: 484  KEFDVAGRAVTVSRTNSRHEQDDSRKEFDVAGRVM---PLSRTNSRHEQDDSRKECDITG 543
            K FD A  ++    TN   +   S    D A R+    P    +S  + +D+R+      
Sbjct: 483  KPFD-AEDSIIKGITNKFEKALSSEPPTDEANRMFLKPPRIHRSSNSKYNDTRRAMSADP 542

Query: 544  RTVPAPSLSKTTDNRRFPNSRDEV--------DNSTISVLSESRGLK----ANDMSAIAD 603
             T     +  + D    P+  + V        +       S SR L        ++ ++ 
Sbjct: 543  ATFGKGGMENSGDVEDIPSKTERVLSREKPGDEQKNTEYPSGSRELNPVKIVEGVNVVSG 602

Query: 604  NRNSL-----------HGIGSFQGVSAPQKIVKEERYIGSGKTETETKDTTANYKHEDES 663
               SL           H  G+   +      V+E+      KT  +T +T         S
Sbjct: 603  RTRSLVEKFERGEKTTHTEGASTTIEQNNNAVQED----PRKTSRQTGETPVISTRRARS 662

Query: 664  RGHKI---------------------SRDSSFPEATKGGRLRSHVDWE-------KRERP 723
               ++                     +R SSFP         S+V ++       +  R 
Sbjct: 663  TPARVMPIVLNRDSNVTSDEPPLTQPARTSSFPVMPVILNQASNVTYDEPSVALTQESRT 722

Query: 724  NFSRL---TYNASPG--------------------------RAAALENIPLNNGRGYRRS 783
            + +R+   T+N +                              A     P+ + R  R S
Sbjct: 723  SHARILPVTFNQATNITSEEASVTLRRQRRNSAARVRPVLLSQATSHECPVTSVRPLRTS 782

Query: 784  PEK----------------------ETVSPA----------------------------- 843
            P +                        VSP                              
Sbjct: 783  PARVMPTKLNQSVNMTSDTSHIASMHRVSPTQMLATPTVIDQVADMTLDETHATQIQPAC 842

Query: 844  ---------------SDEDTIANVLQQHDQFVNSMQSRSAKLQAVYRHWERHDIKGAVSA 868
                            D D   N++  H++F++++QSR  KLQ V   WER D+KGA+ A
Sbjct: 843  DNMPQKEEPNISDREDDSDITENLMLTHNEFLSTLQSRLTKLQIVRHFWERSDVKGAIGA 902

[Close]

BLAST of Cmc10g0271241 vs. ExPASy Swiss-Prot
Match: F4HTH8 (Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2 OS=Arabidopsis thaliana OX=3702 GN=KTN80.2 PE=1 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 1.3e-157
Identity = 417/1182 (35.28%), Postives = 568/1182 (48.05%), Query Frame = 0


Query: 4    KRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGID 63
            KR YKLQEF+AHS+ VNCL IG+K+SR+ +TGG+D+KVNLWAIGKP +++SL GHTS +D
Sbjct: 3    KRGYKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVD 62

Query: 64   SVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
            SV+FDS+EVLV AGA+SG IKLWD+EEAK+VR  TGHRSNC +V+FHPFGEF ASGS D 
Sbjct: 63   SVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDA 122

Query: 124  NLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC 183
            NLKIWDIRKKGCI TYKGH+RG++ IRFTPDGRWVVSGG DN VK+WDLTAGKLLH+FK 
Sbjct: 123  NLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKF 182

Query: 184  HEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL 243
            HEG ++ +DFHP EFLLATGSAD+TVKFWDLETFELIGS  PE +GVR + F+PDGRTL 
Sbjct: 183  HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLF 242

Query: 244  CGLHESLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITRTEP 303
            CGL +SLKV+SWEP+ CHDGV++GWS L DL + EGKLLGCSY Q+ VG+WV DI++ EP
Sbjct: 243  CGLDDSLKVYSWEPVVCHDGVDMGWSTLGDLCISEGKLLGCSYYQNSVGIWVSDISQIEP 302

Query: 304  YAVNNANRLNG----------------RSEPKSSS-------HLQNENNTKTG------- 363
            Y + +A++                   +S P+ SS        ++N     TG       
Sbjct: 303  YGIGSADKKECVEKILSALDDQSFDRIKSTPRRSSSPDYETKEIKNIYIDSTGGNSAVAH 362

Query: 364  -FCGLSVSQTSDPLLKETKTLGRLS-VSQNSDVAKDPK-------SLSSTGNG------- 423
                LS   TS     + K+L   S V ++SD+ KD         + S T  G       
Sbjct: 363  KSGSLSTPATSTGQAGDNKSLVVHSVVPRDSDIGKDSSDSGKESITFSKTKPGMLLRPAY 422

Query: 424  -PSTPQKIN----------------LNAGSK---------------------------TN 483
               TP K +                L+   K                           TN
Sbjct: 423  VRKTPTKFDETKKQSVAVGYLKKSGLDGEKKLDTETAFDSEMSGRNPYDADDSIIKSITN 482

Query: 484  LVTSAAVP------------------------------------SAVVPKRNSVKATSTF 543
                A +P                                     A+  K+N ++++   
Sbjct: 483  KFEQALLPESPTDEAKCMLLKPPRVQRSPSTKYNEARWATSTDSGALDSKKNGLESSRDM 542

Query: 544  NNP---------------IFNKSDVIPVIVPRTSSRHEQDDSRKEFD------------- 603
            + P               I NKS  I     R  S  +  D  K  +             
Sbjct: 543  DLPTGLRDDRGSNPCEEDIENKS--ISSRSERVLSPEKAGDELKSLESPGGSKESKSVKV 602

Query: 604  VAGRAGPISRTNSRHEQDDSRKEF----DVAGRAVTVSRTNSRHEQD------------- 663
            V G      RT S  E+ +  ++     D A  A  V  +NS  E+              
Sbjct: 603  VRGVKVVSGRTRSLVERFERGEKITHSEDKAASATVVHSSNSVEEEPLTASVQTVSMMPT 662

Query: 664  ---------------------DSRKEFDVAGRVMP--LSR-----------TNSRHEQDD 723
                                  +R+      RVMP  L R           T++R ++  
Sbjct: 663  QVMPVKLDQATNSTTVDVPVLSTRRTKSTPVRVMPVVLGRDTSMATDTPPVTSTRPDRTS 722

Query: 724  SRK-ECDITG-------RTVPAP----SLSKTTDNR--------RFPNSRDEVD-NSTIS 783
            +     D++G       RT PAP     L++TT  +         +P+     D  S +S
Sbjct: 723  ATNLTSDVSGVTSKRQTRTSPAPVMPMILNQTTKMKSDEPSITSTWPDRTSATDLTSDVS 782

Query: 784  VLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEERYIGSGKTETETKDTTA- 843
             +  SR  + +    +    N    I S +    P    + +R   +  T  E+  T+  
Sbjct: 783  GVISSRQTRTSPAPVMPMKLNQKTKIKSDE---PPITSTRPDRPSATNLTSDESPVTSTR 842

Query: 844  --------------NYKHEDESRGHKISRDSSFPEATKGGR----LRSHVDWEKRERPNF 867
                          N +     +  +    S+ P  T   R    + +       ERP  
Sbjct: 843  QAKTSPAPVTPVILNQRQTTNMKSDEPPVISTRPLRTSSARVMPVILNQASTTYDERPLS 902

[Close]

BLAST of Cmc10g0271241 vs. ExPASy Swiss-Prot
Match: O61585 (Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus purpuratus OX=7668 GN=KATNB1 PE=1 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 7.5e-113
Identity = 182/300 (60.67%), Postives = 233/300 (77.67%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           M TKRA+KLQE VAHSS VNCL +G  S RV+VTGGED KVNLWA+GK N I+SL+GHTS
Sbjct: 1   MATKRAWKLQELVAHSSNVNCLALGPMSGRVMVTGGEDKKVNLWAVGKQNCIISLSGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
            +DSV F+SSE LV AG+ SGT+K++DLE AKIVRTLTGHR++   +DFHPFGEF ASGS
Sbjct: 61  PVDSVKFNSSEELVVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFGEFVASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
            DTN+K+WD+R+KGCI+TYKGH+  VN I+F+PDG+W+V+  ED T+KLWDLT GKL  +
Sbjct: 121 TDTNVKLWDVRRKGCIYTYKGHSDQVNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQE 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FK H G V  I+FHP+EFLLA+GS+D+TV+FWDLETF+L+ S  P  S VR ++F+PDG 
Sbjct: 181 FKNHTGGVTGIEFHPNEFLLASGSSDRTVQFWDLETFQLVSSTSPGASAVRSISFHPDGS 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITR 300
            L C   + L  F WEPIRC D   VGW +++D  +   +L+G S+N + V V+V D++R
Sbjct: 241 YLFCSSQDMLHAFGWEPIRCFDTFSVGWGKVADTVIASTQLIGASFNATNVSVYVADLSR 300

[Close]

BLAST of Cmc10g0271241 vs. ExPASy TrEMBL
Match: A0A1S3BDT8 (Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucumis melo OX=3656 GN=LOC103488797 PE=3 SV=1)

HSP 1 Score: 1721.8 bits (4458), Expect = 0.0e+00
Identity = 867/869 (99.77%), Postives = 869/869 (100.00%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR
Sbjct: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITR 300
           TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDL+VHEGKLLGCSYNQSCVGVWVVDITR
Sbjct: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDITR 300

Query: 301 TEPYAVNNANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQ 360
           TEPYAVNNANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQ
Sbjct: 301 TEPYAVNNANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQ 360

Query: 361 NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNP 420
           NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNP
Sbjct: 361 NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNP 420

Query: 421 IFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAV 480
           IFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAV
Sbjct: 421 IFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAV 480

Query: 481 TVSRTNSRHEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECDITGRTVPAPSLSKTTD 540
           TVSRTNSRHEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECD+TGRTVPAPSLSKTTD
Sbjct: 481 TVSRTNSRHEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECDVTGRTVPAPSLSKTTD 540

Query: 541 NRRFPNSRDEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEER 600
           NRRFPNSRDEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEER
Sbjct: 541 NRRFPNSRDEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEER 600

Query: 601 YIGSGKTETETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSR 660
           YIGSGKTETETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSR
Sbjct: 601 YIGSGKTETETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSR 660

Query: 661 LTYNASPGRAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRS 720
           LTYNASPGRAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRS
Sbjct: 661 LTYNASPGRAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRS 720

Query: 721 AKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGL 780
           AKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGL
Sbjct: 721 AKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGL 780

Query: 781 LESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKV 840
           LESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKV
Sbjct: 781 LESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKV 840

Query: 841 KRCLPALIRKRGSVAKSAQELNLALQEFQ 870
           KRCLPALIRKRGSVAKSAQELNLALQEFQ
Sbjct: 841 KRCLPALIRKRGSVAKSAQELNLALQEFQ 869

[Close]

BLAST of Cmc10g0271241 vs. ExPASy TrEMBL
Match: A0A5D3CWT2 (Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003250 PE=3 SV=1)

HSP 1 Score: 1704.9 bits (4414), Expect = 0.0e+00
Identity = 858/861 (99.65%), Postives = 861/861 (100.00%), Query Frame = 0


Query: 9   LQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGIDSVSFD 68
           L+EFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGIDSVSFD
Sbjct: 40  LEEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGIDSVSFD 99

Query: 69  SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
           SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW
Sbjct: 100 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 159

Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQV 188
           DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQV
Sbjct: 160 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQV 219

Query: 189 QCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
           QCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE
Sbjct: 220 QCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE 279

Query: 249 SLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITRTEPYAVNN 308
           SLKVFSWEPIRCHDGVEVGWSRLSDL+VHEGKLLGCSYNQSCVGVWVVDITRTEPYAVNN
Sbjct: 280 SLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDITRTEPYAVNN 339

Query: 309 ANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQNSDVAKDP 368
           ANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQNSDVAKDP
Sbjct: 340 ANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQNSDVAKDP 399

Query: 369 KSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNPIFNKSDVI 428
           KSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNPIFNKSDVI
Sbjct: 400 KSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNPIFNKSDVI 459

Query: 429 PVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAVTVSRTNSR 488
           PVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAVTVSRTNSR
Sbjct: 460 PVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAVTVSRTNSR 519

Query: 489 HEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECDITGRTVPAPSLSKTTDNRRFPNSR 548
           HEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECD+TGRTVPAPSLSKTTDNRRFPNSR
Sbjct: 520 HEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECDVTGRTVPAPSLSKTTDNRRFPNSR 579

Query: 549 DEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEERYIGSGKTE 608
           DEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEERYIGSGKTE
Sbjct: 580 DEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEERYIGSGKTE 639

Query: 609 TETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSRLTYNASPG 668
           TETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSRLTYNASPG
Sbjct: 640 TETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSRLTYNASPG 699

Query: 669 RAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRSAKLQAVYR 728
           RAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRSAKLQAVYR
Sbjct: 700 RAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRSAKLQAVYR 759

Query: 729 HWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGLLESDLDRY 788
           HWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGLLESDLDRY
Sbjct: 760 HWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGLLESDLDRY 819

Query: 789 LDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKVKRCLPALI 848
           LDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKVKRCLPALI
Sbjct: 820 LDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKVKRCLPALI 879

Query: 849 RKRGSVAKSAQELNLALQEFQ 870
           RKRGSVAKSAQELNLALQEFQ
Sbjct: 880 RKRGSVAKSAQELNLALQEFQ 900

[Close]

BLAST of Cmc10g0271241 vs. ExPASy TrEMBL
Match: A0A1S3BDT9 (Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucumis melo OX=3656 GN=LOC103488797 PE=3 SV=1)

HSP 1 Score: 1658.3 bits (4293), Expect = 0.0e+00
Identity = 842/869 (96.89%), Postives = 844/869 (97.12%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR
Sbjct: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITR 300
           TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDL+VHEGKLLGCSYNQSCVGVWVVDITR
Sbjct: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDITR 300

Query: 301 TEPYAVNNANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQ 360
           TEPYAVNNANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQ
Sbjct: 301 TEPYAVNNANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQ 360

Query: 361 NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNP 420
           NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNP
Sbjct: 361 NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNP 420

Query: 421 IFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAV 480
           IFNKSDVIPVIVPRTS                         SRHEQDDSRKEFDVAGRAV
Sbjct: 421 IFNKSDVIPVIVPRTS-------------------------SRHEQDDSRKEFDVAGRAV 480

Query: 481 TVSRTNSRHEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECDITGRTVPAPSLSKTTD 540
           TVSRTNSRHEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECD+TGRTVPAPSLSKTTD
Sbjct: 481 TVSRTNSRHEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECDVTGRTVPAPSLSKTTD 540

Query: 541 NRRFPNSRDEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEER 600
           NRRFPNSRDEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEER
Sbjct: 541 NRRFPNSRDEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEER 600

Query: 601 YIGSGKTETETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSR 660
           YIGSGKTETETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSR
Sbjct: 601 YIGSGKTETETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSR 660

Query: 661 LTYNASPGRAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRS 720
           LTYNASPGRAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRS
Sbjct: 661 LTYNASPGRAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRS 720

Query: 721 AKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGL 780
           AKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGL
Sbjct: 721 AKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGL 780

Query: 781 LESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKV 840
           LESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKV
Sbjct: 781 LESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKV 840

Query: 841 KRCLPALIRKRGSVAKSAQELNLALQEFQ 870
           KRCLPALIRKRGSVAKSAQELNLALQEFQ
Sbjct: 841 KRCLPALIRKRGSVAKSAQELNLALQEFQ 844

[Close]

BLAST of Cmc10g0271241 vs. ExPASy TrEMBL
Match: A0A0A0KPN4 (Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucumis sativus OX=3659 GN=Csa_5G580650 PE=3 SV=1)

HSP 1 Score: 1617.1 bits (4186), Expect = 0.0e+00
Identity = 823/869 (94.71%), Postives = 828/869 (95.28%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR
Sbjct: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITR 300
           TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDL+VHEGKLLGCSYNQSCVGVWVVDITR
Sbjct: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDITR 300

Query: 301 TEPYAVNNANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQ 360
           TEPYAVNNANRLNGR EPKSSSHLQNENNTKT F GLSVSQTSD LLKETKTLGRLSVSQ
Sbjct: 301 TEPYAVNNANRLNGRPEPKSSSHLQNENNTKTSFGGLSVSQTSDALLKETKTLGRLSVSQ 360

Query: 361 NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNP 420
           NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLV+SAAVPSAVVPKRNSVKATSTFNNP
Sbjct: 361 NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVSSAAVPSAVVPKRNSVKATSTFNNP 420

Query: 421 IFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAV 480
           IFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRA P                        
Sbjct: 421 IFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAVP------------------------ 480

Query: 481 TVSRTNSRHEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECDITGRTVPAPSLSKTTD 540
            VSRTNSR EQDDSRKEFDVA RVMPLSR+NSRHEQDDSRKECD+ GR  PAP LSKTTD
Sbjct: 481 -VSRTNSRQEQDDSRKEFDVAARVMPLSRSNSRHEQDDSRKECDVAGRAAPAPLLSKTTD 540

Query: 541 NRRFPNSRDEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEER 600
           NRRFPNSRDEVDN TISVLSESRGLKANDMS IADNRNSLHGIGS QGVSAPQKIVKEER
Sbjct: 541 NRRFPNSRDEVDNPTISVLSESRGLKANDMSTIADNRNSLHGIGSIQGVSAPQKIVKEER 600

Query: 601 YIGSGKTETETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSR 660
           YIGSGK ETETKDTTANYKHEDESRGHKISRD+SFPEATKGGRLRSHVDWEKRERPNFSR
Sbjct: 601 YIGSGKNETETKDTTANYKHEDESRGHKISRDASFPEATKGGRLRSHVDWEKRERPNFSR 660

Query: 661 LTYNASPGRAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRS 720
           LTYNASPGRAAALENIPLNNGRGYR SPEKETVSPASDEDTIANVLQQHDQFVNSMQSRS
Sbjct: 661 LTYNASPGRAAALENIPLNNGRGYRPSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRS 720

Query: 721 AKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGL 780
           AKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGL
Sbjct: 721 AKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGL 780

Query: 781 LESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKV 840
           LESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKV
Sbjct: 781 LESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKV 840

Query: 841 KRCLPALIRKRGSVAKSAQELNLALQEFQ 870
           KRCLPALIRKRGSVAKSAQELNLALQEFQ
Sbjct: 841 KRCLPALIRKRGSVAKSAQELNLALQEFQ 844

[Close]

BLAST of Cmc10g0271241 vs. ExPASy TrEMBL
Match: A0A6J1HPE2 (Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111466513 PE=3 SV=1)

HSP 1 Score: 1572.0 bits (4069), Expect = 0.0e+00
Identity = 789/872 (90.48%), Postives = 831/872 (95.30%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
Sbjct: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR
Sbjct: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITR 300
           TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDL+VHEGKLLGCSYNQ+CVGVWVVDITR
Sbjct: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLNVHEGKLLGCSYNQNCVGVWVVDITR 300

Query: 301 TEPYAVNNANRLNGRSEPKSSSH--LQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSV 360
           TEPYA+NN NRLNGRSEPKSSS+  LQNENN K  F GLSVSQTSDPLLKETKTLGRLSV
Sbjct: 301 TEPYAINNVNRLNGRSEPKSSSNLSLQNENNAKANFGGLSVSQTSDPLLKETKTLGRLSV 360

Query: 361 SQNSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFN 420
           SQN+DV KDPK LSSTGNGPSTPQ+++ NAG K N V+S AVP+AVVPKRNSVKATSTFN
Sbjct: 361 SQNTDV-KDPKPLSSTGNGPSTPQRVSSNAGPKANSVSSVAVPNAVVPKRNSVKATSTFN 420

Query: 421 NPIFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGR 480
           NPIFNKSDVIPVIVPRT+SRHEQDDSRK+FDVAGRA P+ RTNSRHEQDDSRKE DVAGR
Sbjct: 421 NPIFNKSDVIPVIVPRTNSRHEQDDSRKDFDVAGRAMPLPRTNSRHEQDDSRKELDVAGR 480

Query: 481 AVTVSRTNSRHEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECDITGRTVPAPSLSKT 540
           A+ + RTNSRHEQDDSRKE DVAGR MPLSRTNSRHEQDDSRKE D+ GR VPAP LSKT
Sbjct: 481 AMPLPRTNSRHEQDDSRKELDVAGRAMPLSRTNSRHEQDDSRKELDVAGRAVPAPLLSKT 540

Query: 541 TD-NRRFPNSRDEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVK 600
           TD NRRFP+ RDEVDNSTIS+LSESRGLKA DMS IADNRNSLHGIGS QG SAPQKIVK
Sbjct: 541 TDTNRRFPSGRDEVDNSTISILSESRGLKAADMSNIADNRNSLHGIGSIQGASAPQKIVK 600

Query: 601 EERYIGSGKTETETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPN 660
           EER+IGSGK ETETK++TA+YKHEDES+GHKISRD +FPEAT+GGR+RS VDWEKRER N
Sbjct: 601 EERHIGSGKNETETKESTASYKHEDESQGHKISRDGAFPEATRGGRMRSRVDWEKRERAN 660

Query: 661 FSRLTYNASPGRAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQ 720
           FSR T+NASPGRAAAL++ PLNNGRGYRRSP+KETV+P SDED IAN+LQQHDQF+N MQ
Sbjct: 661 FSRSTFNASPGRAAALDSFPLNNGRGYRRSPDKETVAPTSDEDIIANILQQHDQFINLMQ 720

Query: 721 SRSAKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVL 780
           SRSAKLQAVYR+WERHDIKGAVSAMEKMADHAVAADVISI+T++IEV+TLDIC+CILPVL
Sbjct: 721 SRSAKLQAVYRYWERHDIKGAVSAMEKMADHAVAADVISILTDKIEVITLDICSCILPVL 780

Query: 781 SGLLESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIEL 840
           S LLESDLDR+LDI+MEML+KLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIEL
Sbjct: 781 SSLLESDLDRFLDIAMEMLLKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIEL 840

Query: 841 EKVKRCLPALIRKRGSVAKSAQELNLALQEFQ 870
           EKVKRCLPALIRKRGSVAKSAQELNLALQEFQ
Sbjct: 841 EKVKRCLPALIRKRGSVAKSAQELNLALQEFQ 871

[Close]

BLAST of Cmc10g0271241 vs. TAIR 10
Match: AT5G23430.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 873.2 bits (2255), Expect = 1.7e-253
Identity = 495/917 (53.98%), Postives = 608/917 (66.30%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHS+AVNCLKIGRKSSRVLVTGGED KVNLWAIGKPNAILSL GH+S
Sbjct: 1   MTTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSV+FD+SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVN +RFTPDGRWVVSGGEDN VK+WDLTAGKLL +
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FK HEGQ+Q +DFHPHEFLLATGSAD+TVKFWDLETFELIGS GPET+GVRCL+FNPDG+
Sbjct: 181 FKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGK 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITR 300
           T+LCGL ESLK+FSWEPIRCHDGV+VGWSRLSD++VHEGKLLGCSYNQSCVGVWVVD++R
Sbjct: 241 TVLCGLQESLKIFSWEPIRCHDGVDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSR 300

Query: 301 TEPYAVNNANRLNGRSEPKSSSH----LQNENNTKTGFCGLSVSQTSDPLLKETKT---- 360
           TEP    +  + NG  E +S S     + N+NN+KT    LSVSQ  DPLLKETK+    
Sbjct: 301 TEPCMAGDTAQSNGHPEKRSCSGRDPVVLNDNNSKTVLGKLSVSQNVDPLLKETKSLGRL 360

Query: 361 ----------------------------------LGRLSVSQNSDVAKDPKSLSSTGNGP 420
                                             LGRLSVSQNSDV+K+ ++ SSTG+ P
Sbjct: 361 SVSQNSDPSTKETKSIGRSSTSQNSESSMKESKPLGRLSVSQNSDVSKESRTFSSTGSLP 420

Query: 421 STPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNPIFNKSDVIPVIVPRTSSR 480
            TP +++    SK     S AV +A   +RN  KA     NP+   +D  PVIVPR   R
Sbjct: 421 GTPHRVSSTNVSKATSGVSTAVSNAATSRRNFTKANPK-ANPVNKAADFAPVIVPRADPR 480

Query: 481 HEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAVTVSRTNSRHEQDDSRKEF 540
            EQ                                                   +SR E 
Sbjct: 481 IEQ-------------------------------------------------ATESRAEL 540

Query: 541 DVAGRVMPLSRTNSRHEQDDSRKECDITGRTVPAPSLSKTTDNRRFPNSRDEVDNSTISV 600
           D+  R MP S                            +  D+RR P+SR+  D    SV
Sbjct: 541 DIIARTMPYS---------------------------LQAADSRRSPSSRNNPDLPDASV 600

Query: 601 L--SESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEERYIGSGKTETETKDTTA 660
           L  SES+ ++ N+   I D      G    +G  A ++ + + RY   G++ + ++  + 
Sbjct: 601 LEMSESQPVEPNN---IPDGGTLPGGKVGMRG--ATERSINDFRYKRYGRSNSRSRMGSP 660

Query: 661 NYKHED--ESRGHKISRDSSFPEATKGGRLRSHV-DWEKRER-PNFSRLTYNASPGRAAA 720
              H++  +   H+ +RD S  E+ KGGR +S V + E+R R  NF     N S G   A
Sbjct: 661 PRNHDENYDLVSHRSNRDPSPTESQKGGRFQSLVINRERRGRFSNFEGPVSNFSSGNMPA 720

Query: 721 LENIPLN--NGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRSAKLQAVYRHW 780
               P N    RG    P ++ +   S+E+ + +++ +H+QFV+SMQSR AKLQ V R+W
Sbjct: 721 PNIRPSNMFKQRG-NHMPVEQGIDSPSEENIVEDIMGKHNQFVSSMQSRLAKLQVVRRYW 780

Query: 781 ERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGLLESDLDRYLD 840
           ER+D+K ++ ++EKMAD+AV ADV+ I+T R E++TLD CT +LP+L+ LL S +D++L 
Sbjct: 781 ERNDVKNSIGSIEKMADNAVTADVLGIITERNEILTLDNCTSLLPLLTALLGSGMDQHLS 834

Query: 841 ISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKVKRCLPALIRK 868
           +S+++L+KLVR +GS IYS+LSA +SVGV+IEAEQR+ER + CF+ELEKVK CLP+L R+
Sbjct: 841 VSLDLLLKLVRLYGSPIYSSLSAPASVGVDIEAEQRIERYSRCFVELEKVKACLPSLARR 834

[Close]

BLAST of Cmc10g0271241 vs. TAIR 10
Match: AT5G23430.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 867.8 bits (2241), Expect = 7.1e-252
Identity = 495/917 (53.98%), Postives = 607/917 (66.19%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           MTTKRAYKLQEFVAHS+AVNCLKIGRKSSRVLVTGGED KVNLWAIGKPNAILSL GH+S
Sbjct: 1   MTTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSV+FD+SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61  GIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVN +RFTPDGRWVVSGGEDN VK+WDLTAGKLL +
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FK HEGQ+Q +DFHPHEFLLATGSAD+TVKFWDLETFELIGS GPET+GVRCL+FNPDG+
Sbjct: 181 FKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGK 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITR 300
           T+LCGL ESLK+FSWEPIRCHDGV+VGWSRLSD++VHEGKLLGCSYNQSCVGVWVVD++R
Sbjct: 241 TVLCGLQESLKIFSWEPIRCHDGVDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSR 300

Query: 301 TEPYAVNNANRLNGRSEPKSSSH----LQNENNTKTGFCGLSVSQTSDPLLKETKT---- 360
           TEP    +  + NG  E +S S     + N+NN+KT    LSVSQ  DPLLKETK+    
Sbjct: 301 TEPCMAGDTAQSNGHPEKRSCSGRDPVVLNDNNSKTVLGKLSVSQNVDPLLKETKSLGRL 360

Query: 361 ----------------------------------LGRLSVSQNSDVAKDPKSLSSTGNGP 420
                                             LGRLSVSQNSDV+K+ ++ SSTG+ P
Sbjct: 361 SVSQNSDPSTKETKSIGRSSTSQNSESSMKESKPLGRLSVSQNSDVSKESRTFSSTGSLP 420

Query: 421 STPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNPIFNKSDVIPVIVPRTSSR 480
            TP +++    SK     S AV +A   +RN  KA     NP+   +D  PVIVPR   R
Sbjct: 421 GTPHRVSSTNVSKATSGVSTAVSNAATSRRNFTKANPK-ANPVNKAADFAPVIVPRADPR 480

Query: 481 HEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAVTVSRTNSRHEQDDSRKEF 540
            EQ                                                   +SR E 
Sbjct: 481 IEQ-------------------------------------------------ATESRAEL 540

Query: 541 DVAGRVMPLSRTNSRHEQDDSRKECDITGRTVPAPSLSKTTDNRRFPNSRDEVDNSTISV 600
           D+  R MP S                            +  D+RR P+SR+  D    SV
Sbjct: 541 DIIARTMPYS---------------------------LQAADSRRSPSSRNNPDLPDASV 600

Query: 601 L--SESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEERYIGSGKTETETKDTTA 660
           L  SES+ ++ N+   I D      G    +G  A ++ + + RY   G++ + ++  + 
Sbjct: 601 LEMSESQPVEPNN---IPDGGTLPGGKVGMRG--ATERSINDFRYKRYGRSNSRSRMGSP 660

Query: 661 NYKHED--ESRGHKISRDSSFPEATKGGRLRSHV-DWEKRER-PNFSRLTYNASPGRAAA 720
              H++  +   H+ +RD S  E+ KGGR +S V + E+R R  NF     N S G   A
Sbjct: 661 PRNHDENYDLVSHRSNRDPSPTESQKGGRFQSLVINRERRGRFSNFEGPVSNFSSGNMPA 720

Query: 721 LENIPLN--NGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRSAKLQAVYRHW 780
               P N    RG    P ++ +   S+E+ + +++ +H+QFV+SMQSR AKLQ V R+W
Sbjct: 721 PNIRPSNMFKQRG-NHMPVEQGIDSPSEENIVEDIMGKHNQFVSSMQSRLAKLQVVRRYW 780

Query: 781 ERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGLLESDLDRYLD 840
           ER+D+K ++ ++EKMAD+AV ADV+ I+T R E++TLD CT +LP+L+ LL S +D++L 
Sbjct: 781 ERNDVKNSIGSIEKMADNAVTADVLGIITERNEILTLDNCTSLLPLLTALLGSGMDQHLS 833

Query: 841 ISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKVKRCLPALIRK 868
           +S+++L+KLVR +GS IYS+LSA +SVGV+IEAEQR+ER + CF+ELEKVK CLP+L R 
Sbjct: 841 VSLDLLLKLVRLYGSPIYSSLSAPASVGVDIEAEQRIERYSRCFVELEKVKACLPSLAR- 833

[Close]

BLAST of Cmc10g0271241 vs. TAIR 10
Match: AT5G08390.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 860.5 bits (2222), Expect = 1.1e-249
Identity = 484/913 (53.01%), Postives = 591/913 (64.73%), Query Frame = 0


Query: 1   MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS 60
           M TKRAYKLQEFVAHS+AVNCLKIGRKSSRVLVTGGED KVNLWAIGKPNAILSL GH+S
Sbjct: 1   MNTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60

Query: 61  GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
           GIDSV+FD+SE LVAAGAASGTIKLWDLEEAK+VRTLTGHRSNC+SV+FHPFGEFFASGS
Sbjct: 61  GIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGS 120

Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
           LDTNLKIWDIRKKGCIHTYKGHTRGVN +RFTPDGRW+VSGGEDN VK+WDLTAGKLLH+
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHE 180

Query: 181 FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
           FK HEG++Q +DFHPHEFLLATGSADKTVKFWDLETFELIGS G ET+GVRCLTFNPDG+
Sbjct: 181 FKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGK 240

Query: 241 TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITR 300
           ++LCGL ESLK+FSWEPIRCHDGV+VGWS LSD++VHEGKLLGCSYNQ+CVGVWVVD++R
Sbjct: 241 SVLCGLQESLKIFSWEPIRCHDGVDVGWSNLSDMNVHEGKLLGCSYNQNCVGVWVVDLSR 300

Query: 301 TEPYAVNNANRLNGRSEPKSSSHLQ----NENNTKTGFCGLSVSQTSDPLLKETKTLGRL 360
           TEP +   A + N   E  S S       N+N++K     L  SQ  DPLLKETK+LG+L
Sbjct: 301 TEPMS-GGATQSNSHPEKTSGSGRDQAGLNDNSSKVILGKLPGSQKVDPLLKETKSLGKL 360

Query: 361 SVSQNSD--------------------VAKDPK------------------SLSSTGNGP 420
           SVSQNSD                    + K+PK                  +LSSTG+  
Sbjct: 361 SVSQNSDPLPKDTKSTGRSSVSQSSDPLVKEPKPLGRFSATHSSDTVKESRTLSSTGSVS 420

Query: 421 STPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNPIFNKSDVIPVIVPRTSSR 480
            +P ++ L +  K+    S  VP+A   KRN  KA    N P+ NK D  PVIVPRT   
Sbjct: 421 DSPHRVTLTSAPKSASGISTVVPNAAASKRNFGKANPKANPPVVNKEDYFPVIVPRTEPI 480

Query: 481 HEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAVTVSRTNSRHEQDDSRKEF 540
            EQ                                                         
Sbjct: 481 IEQ--------------------------------------------------------- 540

Query: 541 DVAGRVMPLSRTNSRHEQDDSRKECDITGRTVPAPSLSKTTDNRRFPNSRDEVDNSTISV 600
                              +SR E DI GRT+P    SK  D+RR  +SR+E D  T S+
Sbjct: 541 -----------------ASESRAELDIIGRTMPYSLQSKAADSRRLSSSRNEPDLPTSSL 600

Query: 601 LSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEERYIGSGKTETETKDTTANY 660
           L  S+      ++    N       GS+       K  K  R  G   + +  +    N+
Sbjct: 601 LERSQSQPIEPITLQDGNTYPSDEGGSWDTAERTNKESK-CRVFGRFNSRSLVRSPPRNH 660

Query: 661 KHEDESRGHKISRDSSFPEATKGGRLRSHV-DWEKRER-PNFSRLTYNASPGRAAALENI 720
               +   +  +RDSS  E+ KGGRL S V + E+R R  NF     ++S G   A  + 
Sbjct: 661 DENSDLISYNANRDSSPTESRKGGRLHSLVLNRERRGRFSNFEGPVSSSSGGNMTAPNSR 720

Query: 721 PLN--NGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRSAKLQAVYRHWERHD 780
           P N    RG    P  + ++ AS+ED +A+++ QHDQFV+SM SR AKLQ V R+WER+D
Sbjct: 721 PSNMLKQRG-NHVPVDQGITSASEEDIVADIMGQHDQFVSSMHSRLAKLQVVRRYWERND 780

Query: 781 IKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGLLESDLDRYLDISME 840
           IK ++S++EKMAD+AV ADV+ I+  R E++TLD CT +LP+L+ LL S++D +L + ++
Sbjct: 781 IKNSISSIEKMADNAVIADVLLIVNERPEILTLDTCTSLLPLLTALLGSNMDSHLSVCLD 836

Query: 841 MLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKVKRCLPALIRKRGSV 868
           +L+KLVR +GS IYS+LSA SSVGV+IEAEQR+ER + CF+E EK+K CLP+L R+   V
Sbjct: 841 LLLKLVRMYGSQIYSSLSAPSSVGVDIEAEQRMERYSCCFVEFEKIKACLPSLARRGNLV 836

[Close]

BLAST of Cmc10g0271241 vs. TAIR 10
Match: AT1G11160.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 581.6 bits (1498), Expect = 1.0e-165
Identity = 381/1030 (36.99%), Postives = 535/1030 (51.94%), Query Frame = 0


Query: 4    KRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGID 63
            KR YKLQEFVAHS  VNCL IG+K+SR+L+TGG+D+KVNLW+IGK  + +SL GHTS +D
Sbjct: 3    KRGYKLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVD 62

Query: 64   SVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
            SV+F+S EVLV AGA+SG IKLWDLEE+K+VR  TGHRSNC +V+FHPFGEF ASGS DT
Sbjct: 63   SVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDT 122

Query: 124  NLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC 183
            NL++WD RKKGCI TYKGHTRG++ I F+PDGRWVVSGG DN VK+WDLTAGKLLH+FKC
Sbjct: 123  NLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKC 182

Query: 184  HEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL 243
            HEG ++ +DFHP EFLLATGSAD+TVKFWDLETFELIG+  PE +GVR + F+PDG+TL 
Sbjct: 183  HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLF 242

Query: 244  CGLHESLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITRTEP 303
            CGL + LKV+SWEP+ C DGV++GWS L D  ++EGK +GCSY ++ VG+WV DI+  EP
Sbjct: 243  CGLDDGLKVYSWEPVICRDGVDMGWSTLGDFCINEGKFIGCSYYRNSVGIWVSDISELEP 302

Query: 304  YAVNNANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQNSD 363
            Y   + ++       K  S L N+ + + G  G   S + D   +E K +   S   N +
Sbjct: 303  YGAVSEDK--NECMVKRFSVL-NDQSERMG-SGPRGSVSPDYETREIKNIYVDSTGGNLN 362

Query: 364  VAKDPKSLSSTGNGPSTPQKINLNAGSKTNLV--------------TSAAVPSAVVPKRN 423
            VA++P SL +T   P    K+      K N                 S +   +   +R 
Sbjct: 363  VAQNPGSLKAT--LPLESGKVATMVSEKQNAAYFGPAGDKYSSTSRDSDSGEESSYSERE 422

Query: 424  SVKATSTFNNPIFNKSDVIPVIVPRTSSRHE---QDDSRKEFDVAGRAGPISRTNSRHEQ 483
            S+  + T +  +   + V   +     S+     Q  +RK+  +A    P ++     EQ
Sbjct: 423  SIPFSRTKSGMLLRPAHVRKTLAKFEESKQSAVVQSATRKKSGLAVEEEPQTQNAFLSEQ 482

Query: 484  DDSRKEFDVAGRAVTVSRTNSRHEQDDSRKEFDVAGRVM---PLSRTNSRHEQDDSRKEC 543
            + S K FD A  ++    TN   +   S    D A R+    P    +S  + +D+R+  
Sbjct: 483  NAS-KPFD-AEDSIIKGITNKFEKALSSEPPTDEANRMFLKPPRIHRSSNSKYNDTRRAM 542

Query: 544  DITGRTVPAPSLSKTTDNRRFPNSRDEV--------DNSTISVLSESRGLK----ANDMS 603
                 T     +  + D    P+  + V        +       S SR L        ++
Sbjct: 543  SADPATFGKGGMENSGDVEDIPSKTERVLSREKPGDEQKNTEYPSGSRELNPVKIVEGVN 602

Query: 604  AIADNRNSL-----------HGIGSFQGVSAPQKIVKEERYIGSGKTETETKDTTANYKH 663
             ++    SL           H  G+   +      V+E+      KT  +T +T      
Sbjct: 603  VVSGRTRSLVEKFERGEKTTHTEGASTTIEQNNNAVQED----PRKTSRQTGETPVISTR 662

Query: 664  EDESRGHKI---------------------SRDSSFPEATKGGRLRSHVDWE-------K 723
               S   ++                     +R SSFP         S+V ++       +
Sbjct: 663  RARSTPARVMPIVLNRDSNVTSDEPPLTQPARTSSFPVMPVILNQASNVTYDEPSVALTQ 722

Query: 724  RERPNFSRL---TYNASPG--------------------------RAAALENIPLNNGRG 783
              R + +R+   T+N +                              A     P+ + R 
Sbjct: 723  ESRTSHARILPVTFNQATNITSEEASVTLRRQRRNSAARVRPVLLSQATSHECPVTSVRP 782

Query: 784  YRRSPEK----------------------ETVSPA------------------------- 843
             R SP +                        VSP                          
Sbjct: 783  LRTSPARVMPTKLNQSVNMTSDTSHIASMHRVSPTQMLATPTVIDQVADMTLDETHATQI 842

Query: 844  -------------------SDEDTIANVLQQHDQFVNSMQSRSAKLQAVYRHWERHDIKG 868
                                D D   N++  H++F++++QSR  KLQ V   WER D+KG
Sbjct: 843  QPACDNMPQKEEPNISDREDDSDITENLMLTHNEFLSTLQSRLTKLQIVRHFWERSDVKG 902

[Close]

BLAST of Cmc10g0271241 vs. TAIR 10
Match: AT1G61210.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 560.5 bits (1443), Expect = 2.4e-159
Identity = 417/1180 (35.34%), Postives = 566/1180 (47.97%), Query Frame = 0


Query: 4    KRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGID 63
            KR YKLQEF+AHS+ VNCL IG+K+SR+ +TGG+D+KVNLWAIGKP +++SL GHTS +D
Sbjct: 3    KRGYKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVD 62

Query: 64   SVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
            SV+FDS+EVLV AGA+SG IKLWD+EEAK+VR  TGHRSNC +V+FHPFGEF ASGS D 
Sbjct: 63   SVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDA 122

Query: 124  NLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC 183
            NLKIWDIRKKGCI TYKGH+RG++ IRFTPDGRWVVSGG DN VK+WDLTAGKLLH+FK 
Sbjct: 123  NLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKF 182

Query: 184  HEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL 243
            HEG ++ +DFHP EFLLATGSAD+TVKFWDLETFELIGS  PE +GVR + F+PDGRTL 
Sbjct: 183  HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLF 242

Query: 244  CGLHESLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITRTEP 303
            CGL +SLKV+SWEP+ CHDGV++GWS L DL + EGKLLGCSY Q+ VG+WV DI++ EP
Sbjct: 243  CGLDDSLKVYSWEPVVCHDGVDMGWSTLGDLCISEGKLLGCSYYQNSVGIWVSDISQIEP 302

Query: 304  YAVNNANRLNG----------------RSEPKSSSHLQNENNTKTGF---CG-------- 363
            Y + +A++                   +S P+ SS    E          CG        
Sbjct: 303  YGIGSADKKECVEKILSALDDQSFDRIKSTPRRSSSPDYETKEIKNIYIDCGNSAVAHKS 362

Query: 364  --LSVSQTSDPLLKETKTLGRLS-VSQNSDVAKDPK-------SLSSTGNG--------P 423
              LS   TS     + K+L   S V ++SD+ KD         + S T  G         
Sbjct: 363  GSLSTPATSTGQAGDNKSLVVHSVVPRDSDIGKDSSDSGKESITFSKTKPGMLLRPAYVR 422

Query: 424  STPQKIN----------------LNAGSK---------------------------TNLV 483
             TP K +                L+   K                           TN  
Sbjct: 423  KTPTKFDETKKQSVAVGYLKKSGLDGEKKLDTETAFDSEMSGRNPYDADDSIIKSITNKF 482

Query: 484  TSAAVP------------------------------------SAVVPKRNSVKATSTFNN 543
              A +P                                     A+  K+N ++++   + 
Sbjct: 483  EQALLPESPTDEAKCMLLKPPRVQRSPSTKYNEARWATSTDSGALDSKKNGLESSRDMDL 542

Query: 544  P---------------IFNKSDVIPVIVPRTSSRHEQDDSRKEFD-------------VA 603
            P               I NKS  I     R  S  +  D  K  +             V 
Sbjct: 543  PTGLRDDRGSNPCEEDIENKS--ISSRSERVLSPEKAGDELKSLESPGGSKESKSVKVVR 602

Query: 604  GRAGPISRTNSRHEQDDSRKEF----DVAGRAVTVSRTNSRHEQD--------------- 663
            G      RT S  E+ +  ++     D A  A  V  +NS  E+                
Sbjct: 603  GVKVVSGRTRSLVERFERGEKITHSEDKAASATVVHSSNSVEEEPLTASVQTVSMMPTQV 662

Query: 664  -------------------DSRKEFDVAGRVMP--LSR-----------TNSRHEQDDSR 723
                                +R+      RVMP  L R           T++R ++  + 
Sbjct: 663  MPVKLDQATNSTTVDVPVLSTRRTKSTPVRVMPVVLGRDTSMATDTPPVTSTRPDRTSAT 722

Query: 724  K-ECDITG-------RTVPAP----SLSKTTDNR--------RFPNSRDEVD-NSTISVL 783
                D++G       RT PAP     L++TT  +         +P+     D  S +S +
Sbjct: 723  NLTSDVSGVTSKRQTRTSPAPVMPMILNQTTKMKSDEPSITSTWPDRTSATDLTSDVSGV 782

Query: 784  SESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEERYIGSGKTETETKDTTA--- 843
              SR  + +    +    N    I S +    P    + +R   +  T  E+  T+    
Sbjct: 783  ISSRQTRTSPAPVMPMKLNQKTKIKSDE---PPITSTRPDRPSATNLTSDESPVTSTRQA 842

Query: 844  ------------NYKHEDESRGHKISRDSSFPEATKGGR----LRSHVDWEKRERPNFSR 867
                        N +     +  +    S+ P  T   R    + +       ERP  S 
Sbjct: 843  KTSPAPVTPVILNQRQTTNMKSDEPPVISTRPLRTSSARVMPVILNQASTTYDERPLSSS 902

The following BLAST results are available for this feature:

BLAST of Cmc10g0271241 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445914.1	0.0e+00	99.77	PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1 [Cuc...	[more]
KAA0034099.1	0.0e+00	99.65	katanin p80 WD40 repeat-containing subunit B1-like protein isoform X1 [Cucumis m...	[more]
XP_008445915.1	0.0e+00	96.89	PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog isoform X2 [Cuc...	[more]
XP_011655511.1	0.0e+00	94.71	katanin p80 WD40 repeat-containing subunit B1 homolog [Cucumis sativus] >KGN5158...	[more]
XP_022966957.1	0.0e+00	90.48	katanin p80 WD40 repeat-containing subunit B1 homolog isoform X2 [Cucurbita maxi...	[more]

BLAST of Cmc10g0271241 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H0T9	2.4e-252	53.98	Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4 OS=Arabidopsis tha...	[more]
F4KB17	1.6e-248	53.01	Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3 OS=Arabidopsis tha...	[more]
A0A1P8AW69	1.9e-164	37.23	Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1 OS=Arabidopsis tha...	[more]
F4HTH8	1.3e-157	35.28	Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2 OS=Arabidopsis tha...	[more]
O61585	7.5e-113	60.67	Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus purpuratus O...	[more]

BLAST of Cmc10g0271241 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BDT8	0.0e+00	99.77	Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucumis melo OX=3656 GN...	[more]
A0A5D3CWT2	0.0e+00	99.65	Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucumis melo var. makuw...	[more]
A0A1S3BDT9	0.0e+00	96.89	Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0KPN4	0.0e+00	94.71	Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucumis sativus OX=3659...	[more]
A0A6J1HPE2	0.0e+00	90.48	Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Cucurbita maxima OX=366...	[more]

BLAST of Cmc10g0271241 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23430.1	1.7e-253	53.98	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G23430.2	7.1e-252	53.98	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G08390.1	1.1e-249	53.01	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G11160.1	1.0e-165	36.99	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G61210.2	2.4e-159	35.34	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 858..869
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 607..634
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 678..697
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 358..387
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 485..502
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 510..525
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 436..452
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 433..553
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 460..477
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..328
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 607..643
None	No IPR available	PANTHER	PTHR19845	KATANIN P80 SUBUNIT	coord: 4..867
None	No IPR available	PANTHER	PTHR19845:SF0	KATANIN P80 WD40 REPEAT-CONTAINING SUBUNIT B1	coord: 4..867
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 97..131 score: 11.787407
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 181..216 score: 12.288313
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 139..176 score: 14.371031
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 55..89 score: 11.444681
None	No IPR available	CDD	cd00200	WD40	coord: 9..261 e-value: 6.48718E-67 score: 222.981
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 200..214 score: 40.08 coord: 158..172 score: 43.2 coord: 116..130 score: 38.03
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 90..129 e-value: 1.6E-9 score: 47.6 coord: 48..87 e-value: 2.1E-5 score: 33.9 coord: 5..45 e-value: 0.0021 score: 27.3 coord: 174..213 e-value: 9.7E-11 score: 51.7 coord: 216..254 e-value: 1.2 score: 16.4 coord: 132..171 e-value: 3.7E-13 score: 59.7
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 52..87 e-value: 1.1E-4 score: 22.9 coord: 175..213 e-value: 1.2E-7 score: 32.3 coord: 93..129 e-value: 1.5E-7 score: 32.0 coord: 9..44 e-value: 0.054 score: 14.4 coord: 135..171 e-value: 1.3E-11 score: 44.8
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 139..180 score: 18.562237
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 97..138 score: 14.986489
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 181..222 score: 15.454345
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 12..54 score: 10.074014
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 55..96 score: 15.35409
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 200..303 e-value: 2.6E-10 score: 41.7
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 2..199 e-value: 5.4E-63 score: 214.9
IPR028021	Katanin p80 subunit, C-terminal	PFAM	PF13925	Katanin_con80	coord: 707..865 e-value: 3.7E-51 score: 173.4
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 158..172
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 200..214
IPR026962	Katanin p80 WD40 repeat-containing subunit B1	HAMAP	MF_03022	Katanin_p80_B1	coord: 1..868 score: 20.697493
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 7..295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0271241.1	Cmc10g0271241.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007019	microtubule depolymerization
biological_process	GO:0051013	microtubule severing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0008352	katanin complex
cellular_component	GO:0005874	microtubule
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0005515	protein binding