Cmc10g0270561 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0270561
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Transcription termination factor MTERF5
Location	CMiso1.1chr10: 4669664 .. 4671423 (+)
RNA-Seq Expression	Cmc10g0270561
Synteny	Cmc10g0270561

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTATTTTTTATTTGTTCAAACTTCAATACACATTTATTTTACATTATTTTATGTTATATAATATAATAGAAACGCCCAAATTTGTGGCCTTGGAATTTAAAACCCTAACCAAAACCCTTAGTTCATTTTCTTCGTTCCCATCCCGAAATGTTCAAATTTTCCTCCACGTTTCTTCTACATTTCATCCAAAAACGTTTTCTCAATACCGTTTCTACTTCTACATTGCCTTTAGCCTCCGTTTCTACCATCCAATTCCTCACAAATTCATGTGGCCTTTCTTCAGGATCTCCTATTTCCAGAGGTCGAAAGCTCCAATTCGATGAAAAAAACATCCAGCAGTACGAAGCCGTTATCGGTTTCTTCAAATCACATGGATTCGAGAATTCACAGATCGCCAAGTTGGTCTCGAGGCAACCTTCAATCCTTCAATCCACGGTATCCACCGATCTGAAGCCTAAATTTGATTTCCTTCAGGAAATCGGGATCGTCGGTCCTTTACTTCCTAAGGTAATTCTATCGAACCCTGGGATTCTTTTTAAGAGCGTAAATTCTCAGTTGAAACCAACATTTTGTCTCATAAAGGAAATGCTTGAATCGGATGAAAAGGTAGCTGCTGCTATTTGTCGTGCTTCGTGGATTCTAAGTGCTAATTCCAAGGGTACTATGCGATCTAACATTGATGTTTTGGTCAGTGAAGGAGTACCTTCTACGAATATAGCGAAAATGATTGCATTGAACCCTAGAAGTATTATGCGAAACGTTGATAGAATTATTCATGCAGTGAAAACGGTTAAAGAATTAGGCGTTGAACCAAAGGATCGTACGTTTGTTTATGCAGTTAGTGCAGTGGGTTCGATGAGTGATTCAAGTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAAATTTTTACAGCATTTAAGAAAGATCCAACTTTTTTAACTTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGAAAGTGTAATTATTTACCCGAAGTTCTTCCAGTGTTCGGTTGACAAGCGGCTTAAACCGAGGTACAAAGTTTTTGAGGTTTTGAAGGTGAAAAATCTCCTTAAGAACAAAAACATTGCTCGGTGGTTTATACGAGGGGAGAGAGAATTTGTGGAGAATAATGTTGTTAAGCATTTGGATGAAATCCCAAATCTGATGGATATATACCGGGGCAATGACGCATCCGAAACTAAATCTGTTTCATAGGATTGGAAAGTTGTAAGTTAAAATGTTCTTAAAGACTAAATTTGAGCGTCATGATCTTCAAATGGGAGAGCATTTTTGTTGTTATTGCGCCTACTCCTGTTTCCAATAACACTGCTTCTCGAGCTTTTCAAATGGGAGAGTTGTGTTGTTTTTGCATCCAAATTAGAGCAGTTAGGTAAATCTATTTGGTGTATATTTCTTCGTAGACTTGTTAATCTTGAATTTGGAGGCCTTTTTGATTTTTCCTTCCTAACGTTTTACTCTTTCATTGATCATTTGTAAGTTTGTCGGCTAATTTTGAATCCAATGACATTTGTAAGTTTGTAGACTGATTTTGAATCCAATGACGATGTTGAAATGGGATGAGAGACATGAGAGTTGTACAACCTTATGCTTTGTGTTTTTACAACCTTGCGGATCATTCATCTCCAATGCTCATATTTAGACTTCTAACTCTATCTTTTATGAGATTTATCACAAGTAAATGTT

mRNA sequence

CTCTATTTTTTATTTGTTCAAACTTCAATACACATTTATTTTACATTATTTTATGTTATATAATATAATAGAAACGCCCAAATTTGTGGCCTTGGAATTTAAAACCCTAACCAAAACCCTTAGTTCATTTTCTTCGTTCCCATCCCGAAATGTTCAAATTTTCCTCCACGTTTCTTCTACATTTCATCCAAAAACGTTTTCTCAATACCGTTTCTACTTCTACATTGCCTTTAGCCTCCGTTTCTACCATCCAATTCCTCACAAATTCATGTGGCCTTTCTTCAGGATCTCCTATTTCCAGAGGTCGAAAGCTCCAATTCGATGAAAAAAACATCCAGCAGTACGAAGCCGTTATCGGTTTCTTCAAATCACATGGATTCGAGAATTCACAGATCGCCAAGTTGGTCTCGAGGCAACCTTCAATCCTTCAATCCACGGTATCCACCGATCTGAAGCCTAAATTTGATTTCCTTCAGGAAATCGGGATCGTCGGTCCTTTACTTCCTAAGGAAATGCTTGAATCGGATGAAAAGGTAGCTGCTGCTATTTGTCGTGCTTCGTGGATTCTAAGTGCTAATTCCAAGGGTACTATGCGATCTAACATTGATGTTTTGGTCAGTGAAGGAGTACCTTCTACGAATATAGCGAAAATGATTGCATTGAACCCTAGAAGTATTATGCGAAACGTTGATAGAATTATTCATGCAGTGAAAACGGTTAAAGAATTAGGCGTTGAACCAAAGGATCGTACGTTTGTTTATGCAGTTAGTGCAGTGGGTTCGATGAGTGATTCAAGTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAAATTTTTACAGCATTTAAGAAAGATCCAACTTTTTTAACTTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGAAAGTGTAATTATTTACCCGAAGTTCTTCCAGTGTTCGGTTGACAAGCGGCTTAAACCGAGGTACAAAGTTTTTGAGGTTTTGAAGGTGAAAAATCTCCTTAAGAACAAAAACATTGCTCGGTGGTTTATACGAGGGGAGAGAGAATTTGTGGAGAATAATGTTGTTAAGCATTTGGATGAAATCCCAAATCTGATGGATATATACCGGGGCAATGACGCATCCGAAACTAAATCTGTTTCATAGGATTGGAAAGTTGTAAGTTAAAATGTTCTTAAAGACTAAATTTGAGCGTCATGATCTTCAAATGGGAGAGCATTTTTGTTGTTATTGCGCCTACTCCTGTTTCCAATAACACTGCTTCTCGAGCTTTTCAAATGGGAGAGTTGTGTTGTTTTTGCATCCAAATTAGAGCAGTTAGGTAAATCTATTTGGTGTATATTTCTTCGTAGACTTGTTAATCTTGAATTTGGAGGCCTTTTTGATTTTTCCTTCCTAACGTTTTACTCTTTCATTGATCATTTGTAAGTTTGTCGGCTAATTTTGAATCCAATGACATTTGTAAGTTTGTAGACTGATTTTGAATCCAATGACGATGTTGAAATGGGATGAGAGACATGAGAGTTGTACAACCTTATGCTTTGTGTTTTTACAACCTTGCGGATCATTCATCTCCAATGCTCATATTTAGACTTCTAACTCTATCTTTTATGAGATTTATCACAAGTAAATGTT

Coding sequence (CDS)

ATGTTCAAATTTTCCTCCACGTTTCTTCTACATTTCATCCAAAAACGTTTTCTCAATACCGTTTCTACTTCTACATTGCCTTTAGCCTCCGTTTCTACCATCCAATTCCTCACAAATTCATGTGGCCTTTCTTCAGGATCTCCTATTTCCAGAGGTCGAAAGCTCCAATTCGATGAAAAAAACATCCAGCAGTACGAAGCCGTTATCGGTTTCTTCAAATCACATGGATTCGAGAATTCACAGATCGCCAAGTTGGTCTCGAGGCAACCTTCAATCCTTCAATCCACGGTATCCACCGATCTGAAGCCTAAATTTGATTTCCTTCAGGAAATCGGGATCGTCGGTCCTTTACTTCCTAAGGAAATGCTTGAATCGGATGAAAAGGTAGCTGCTGCTATTTGTCGTGCTTCGTGGATTCTAAGTGCTAATTCCAAGGGTACTATGCGATCTAACATTGATGTTTTGGTCAGTGAAGGAGTACCTTCTACGAATATAGCGAAAATGATTGCATTGAACCCTAGAAGTATTATGCGAAACGTTGATAGAATTATTCATGCAGTGAAAACGGTTAAAGAATTAGGCGTTGAACCAAAGGATCGTACGTTTGTTTATGCAGTTAGTGCAGTGGGTTCGATGAGTGATTCAAGTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAAATTTTTACAGCATTTAAGAAAGATCCAACTTTTTTAACTTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGAAAGTGTAATTATTTACCCGAAGTTCTTCCAGTGTTCGGTTGACAAGCGGCTTAAACCGAGGTACAAAGTTTTTGAGGTTTTGAAGGTGAAAAATCTCCTTAAGAACAAAAACATTGCTCGGTGGTTTATACGAGGGGAGAGAGAATTTGTGGAGAATAATGTTGTTAAGCATTTGGATGAAATCCCAAATCTGATGGATATATACCGGGGCAATGACGCATCCGAAACTAAATCTGTTTCATAG

Protein sequence

MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEKNIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLPKEMLESDEKVAAAICRASWILSANSKGTMRSNIDVLVSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDSSWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPKFFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIARWFIRGEREFVENNVVKHLDEIPNLMDIYRGNDASETKSVS

Homology

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BLAST of Cmc10g0270561 vs. NCBI nr
Match: KAA0034158.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15761.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 664.5 bits (1713), Expect = 5.2e-187
Identity = 348/373 (93.30%), Postives = 348/373 (93.30%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK 60
           MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK 60

Query: 61  NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLP- 120
           NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLP 
Sbjct: 61  NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLPK 120

Query: 121 ------------------------KEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL 180
                                   KEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL
Sbjct: 121 VILSNPGILFKSVNSQLKPTFCLIKEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL 180

Query: 181 VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS 240
           VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS
Sbjct: 181 VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS 240

Query: 241 SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK 300
           SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK
Sbjct: 241 SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK 300

Query: 301 FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIARWFIRGEREFVENNVVKHLDEIPNLMDI 349
           FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIARWFIRGEREFVENNVVKHLDEIPNLMDI
Sbjct: 301 FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIARWFIRGEREFVENNVVKHLDEIPNLMDI 360

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BLAST of Cmc10g0270561 vs. NCBI nr
Match: KAA0034139.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15780.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 571.6 bits (1472), Expect = 4.5e-159
Identity = 305/375 (81.33%), Postives = 319/375 (85.07%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK 60
           MFK SSTFLLHFIQKR  NTVSTSTLPL SVSTIQFLTNSCGL S SP S+GRKLQF EK
Sbjct: 1   MFKISSTFLLHFIQKRSFNTVSTSTLPLPSVSTIQFLTNSCGLFSASPTSKGRKLQFHEK 60

Query: 61  NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLP- 120
           NIQ+YEAVI +FKSHGFENS IAKLVS+QPSILQS VST+LKPKFDFLQEIGIVGPLLP 
Sbjct: 61  NIQEYEAVICYFKSHGFENSHIAKLVSKQPSILQSIVSTNLKPKFDFLQEIGIVGPLLPK 120

Query: 121 ------------------------KEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL 180
                                   KEMLESDEKV  AICRASWILSANSKGTMRSN DVL
Sbjct: 121 VILSNPGILFRSVNSQLKPTFRLIKEMLESDEKVTVAICRASWILSANSKGTMRSNFDVL 180

Query: 181 VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS 240
           VSEGVPSTNIAKMIALNPRSIMRNV R+IHAVKTVKELGVEPKDR FVYAVSAVGSM+ S
Sbjct: 181 VSEGVPSTNIAKMIALNPRSIMRNVGRMIHAVKTVKELGVEPKDRAFVYAVSAVGSMNHS 240

Query: 241 SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK 300
           SWKKKINVMKSLGWSEKEIFTAFK+ P  LTCSEEKMRDVADFCFNTAKLDP ++I YP 
Sbjct: 241 SWKKKINVMKSLGWSEKEIFTAFKRYPLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPV 300

Query: 301 FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIA--RWFIRGEREFVENNVVKHLDEIPNLM 349
           FF  SVDKRL+PRYKV EVLKVKNLLKNK IA   WF++GEREFV+NNVVKHLDEIPNLM
Sbjct: 301 FFNLSVDKRLRPRYKVLEVLKVKNLLKNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLM 360

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BLAST of Cmc10g0270561 vs. NCBI nr
Match: XP_008446012.1 (PREDICTED: transcription termination factor MTERF5, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 539.7 bits (1389), Expect = 1.9e-149
Identity = 283/372 (76.08%), Postives = 311/372 (83.60%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK 60
           MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDE+
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60

Query: 61  NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLP- 120
           N+QQY AVIGFFKSHGFE+SQIAKLVSR+PSIL STVST+LKPKF+FLQEIGIVGPLL  
Sbjct: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLTK 120

Query: 121 ------------------------KEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL 180
                                   KEML SD+KV AAICR SW+L++NS GT+RSNIDVL
Sbjct: 121 LILSNYMILFRSLDSQLKPTFRLIKEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180

Query: 181 VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS 240
           VSEGVPSTNIA++IALNPRS+MR VDR+I AVKTVKELGVEPKD  FVYAVS   SMSDS
Sbjct: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240

Query: 241 SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK 300
           +WKKKINVMKSLGWSE EIFTAFK+ P FLTCSEEKMRD+ADFC NTAKLDP ++I YP+
Sbjct: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 300

Query: 301 FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIARWFIRGEREFVENNVVKHLDEIPNLMDI 348
           FF  SV KRL+PRYKV EVLK+KNLLK KNI   F+ GER FVE  +VKH D+IPNL+DI
Sbjct: 301 FFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLLFVEGERRFVEKYIVKHFDKIPNLIDI 360

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BLAST of Cmc10g0270561 vs. NCBI nr
Match: KAE8648669.1 (hypothetical protein Csa_007829 [Cucumis sativus])

HSP 1 Score: 526.6 bits (1355), Expect = 1.7e-145
Identity = 278/372 (74.73%), Postives = 308/372 (82.80%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK 60
           MFK SSTFLLHFI KR LN++STSTLP  SVSTIQFLTNSCGLSSGSP S GRKL+FDEK
Sbjct: 1   MFKISSTFLLHFIHKRSLNSISTSTLPSPSVSTIQFLTNSCGLSSGSPTSNGRKLRFDEK 60

Query: 61  NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLP- 120
           +IQQYEA+IGF KSHGFENSQIAKLVSRQPSILQS VS +LKPKF+FLQE GIVG LLP 
Sbjct: 61  HIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPK 120

Query: 121 ------------------------KEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL 180
                                   KEMLE+DE V AAICR +W+L+ +SKGT+RSNID+L
Sbjct: 121 VILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDIL 180

Query: 181 VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS 240
           VSEGVPS NIAKMI LNPR+I++NVDRII AVKTVKELGVEPKD  FV+AV+ V SMSDS
Sbjct: 181 VSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKTVKELGVEPKDFKFVHAVTTVLSMSDS 240

Query: 241 SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK 300
           +WKKKINVMKSLGWSEKEI TAFK+ P +LTCSEEKMRDVADFCFNTAKLDP ++I YP 
Sbjct: 241 AWKKKINVMKSLGWSEKEILTAFKRYPPYLTCSEEKMRDVADFCFNTAKLDPGTLIRYPV 300

Query: 301 FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIARWFIRGEREFVENNVVKHLDEIPNLMDI 348
            F+ SVDKRL+PRYKV EVLKVKNLLKN+   + F RGER+FVEN +VKHLDEIPNLMDI
Sbjct: 301 LFKYSVDKRLRPRYKVLEVLKVKNLLKNEKSVQLFFRGERDFVENYIVKHLDEIPNLMDI 360

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BLAST of Cmc10g0270561 vs. NCBI nr
Match: KAE8648655.1 (hypothetical protein Csa_008541 [Cucumis sativus])

HSP 1 Score: 523.1 bits (1346), Expect = 1.9e-144
Identity = 276/372 (74.19%), Postives = 308/372 (82.80%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK 60
           MFK SSTFLLHFI KR LN++STSTLP  SVSTIQFLTNSCGLSSGSP S GRKL+FDEK
Sbjct: 1   MFKISSTFLLHFIHKRSLNSISTSTLPSPSVSTIQFLTNSCGLSSGSPTSNGRKLRFDEK 60

Query: 61  NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLP- 120
           +IQQYEA+IGF KSHGFENSQIAKLVSRQPSILQS VS +LKPKF+FLQE GIVG LLP 
Sbjct: 61  HIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPK 120

Query: 121 ------------------------KEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL 180
                                   KEMLE+DE V AAICR +W+L+ +SKGT+RSNID+L
Sbjct: 121 VILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDIL 180

Query: 181 VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS 240
           VSEGVPS NIAKMI LNPR+I++NVDRII AVK VKELGVEPKD  FV+AV+ V SMSDS
Sbjct: 181 VSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKRVKELGVEPKDFKFVHAVTTVLSMSDS 240

Query: 241 SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK 300
           +WKKKINVMKSLGWSE EIFTAFKK P +LTCSE+K+R+VADFCFNTAKLDP ++I YP 
Sbjct: 241 NWKKKINVMKSLGWSENEIFTAFKKFPPYLTCSEDKLRNVADFCFNTAKLDPGTLISYPV 300

Query: 301 FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIARWFIRGEREFVENNVVKHLDEIPNLMDI 348
            F+ SV+KRL+PRYKV EVLKVKNLLKN+  A+ F RGEREFVEN +VKHLDEIPNLMDI
Sbjct: 301 LFKYSVEKRLRPRYKVLEVLKVKNLLKNEKSAQLFFRGEREFVENYIVKHLDEIPNLMDI 360

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BLAST of Cmc10g0270561 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.1e-10
Identity = 55/243 (22.63%), Postives = 110/243 (45.27%), Query Frame = 0


Query: 61  NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLPK 120
           N+   +  + +  S G ++  I +++ RQP ILQ TV  +LK    FL  +GI       
Sbjct: 215 NVFSAQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGI------- 274

Query: 121 EMLESDEKVAAAICRASWILSANSKGTMRSNIDVLVSE-GVPSTNIAKMIALNPRSIMRN 180
                + K+   +     + S + + ++R  I  L+ E G+  T++ K++ L+P+ +++ 
Sbjct: 275 ----PNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQR 334

Query: 181 VDRIIHA--VKTVKELGVEPKDRTFVYA---VSAVGSMSDSSWKKKINVMKSLGWSEKEI 240
           +D   +   +   KELG  P+D            +    D  +  +IN ++S+G    +I
Sbjct: 335 LDITWNTRYMFLSKELGA-PRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDI 394

Query: 241 FTAFKKDPTFLTCS-EEKMRDVADFCFNTAKLDPESVIIYPKFFQCSVDKRLKPRYKVFE 297
                     L+ S E+ ++    +  N    +   +  YP +   S+D+R++PR++   
Sbjct: 395 LKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLV 445

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BLAST of Cmc10g0270561 vs. ExPASy Swiss-Prot
Match: Q9FK23 (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 6.0e-05
Identity = 33/166 (19.88%), Postives = 76/166 (45.78%), Query Frame = 0


Query: 139 ILSANSKGTMRSNIDVLVSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPK 198
           ++S + +  +R  I+ L   G  S  + K ++  P  +  + + + H +  + ++G + +
Sbjct: 314 VISTSKERKLRPRIEFLKECGFDSPGMFKFLSKAPLILALSENNLSHKLGFLVKIGYKHR 373

Query: 199 DRTFVYAVSAVGSMSDSSWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADF 258
            +   +A+ AV   S  + ++ I +  S G S ++I     K P  L  +   + +  ++
Sbjct: 374 TKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNYTSLEEKLEY 433

Query: 259 CFNTAKLDPESVIIYPKFFQCSVDKRLKPRYKVFEVLKVKNLLKNK 305
                  + E ++ +P F    +D R+K RY+     + +N+  NK
Sbjct: 434 LIEYMGREVEELLAFPAFLGYKLDSRIKHRYEEKLKSRGENMSLNK 479

[Close]

BLAST of Cmc10g0270561 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 6.7e-04
Identity = 58/265 (21.89%), Postives = 111/265 (41.89%), Query Frame = 0


Query: 68  VIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLPKEMLESDE 127
           V+ F    G   S I  ++ ++P I   +++ +LKP   FL+ +GI            D+
Sbjct: 235 VVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGI------------DK 294

Query: 128 KVAAAICRASWILSANSKGTMRSNIDVLVSEGVPSTNIAKMIALNPRSIMRNV-DRIIHA 187
              A I      +   S+  + S ++ L   G+    I +++   P  +  +V D++   
Sbjct: 295 NQWAKIISRFPAILTYSRQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPT 354

Query: 188 VKTVKELGVEPKDRTFVYAVSAVGSMSDSSWKKKINVMKSLGWSEKEIFTAFKKDPTFLT 247
           ++  + L V+             G   +S+ K         G+   EI     +     T
Sbjct: 355 MEYFRSLNVDVA-VLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYT 414

Query: 248 CS-EEKMRDVADFCFNTAKLDPESVIIYPKFFQCSVDKRLKPRYKVFEVLKVKNLLKNKN 307
            S +E +    D+ F T       ++ +P+FF  S+ +R+KPRY++ +   V+ LL N+ 
Sbjct: 415 FSLKENVMPKWDY-FQTMDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVR-LLLNQV 474

Query: 308 IARWFIRGER-------EFVENNVV 324
           ++   I  E+       + V NNV+
Sbjct: 475 LSLSGIEFEKVVKKKMMKLVSNNVI 484

[Close]

BLAST of Cmc10g0270561 vs. ExPASy TrEMBL
Match: A0A5A7SU45 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002650 PE=3 SV=1)

HSP 1 Score: 664.5 bits (1713), Expect = 2.5e-187
Identity = 348/373 (93.30%), Postives = 348/373 (93.30%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK 60
           MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK 60

Query: 61  NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLP- 120
           NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLP 
Sbjct: 61  NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLPK 120

Query: 121 ------------------------KEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL 180
                                   KEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL
Sbjct: 121 VILSNPGILFKSVNSQLKPTFCLIKEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL 180

Query: 181 VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS 240
           VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS
Sbjct: 181 VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS 240

Query: 241 SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK 300
           SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK
Sbjct: 241 SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK 300

Query: 301 FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIARWFIRGEREFVENNVVKHLDEIPNLMDI 349
           FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIARWFIRGEREFVENNVVKHLDEIPNLMDI
Sbjct: 301 FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIARWFIRGEREFVENNVVKHLDEIPNLMDI 360

[Close]

BLAST of Cmc10g0270561 vs. ExPASy TrEMBL
Match: A0A5D3CWN7 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002840 PE=3 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 2.2e-159
Identity = 305/375 (81.33%), Postives = 319/375 (85.07%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK 60
           MFK SSTFLLHFIQKR  NTVSTSTLPL SVSTIQFLTNSCGL S SP S+GRKLQF EK
Sbjct: 1   MFKISSTFLLHFIQKRSFNTVSTSTLPLPSVSTIQFLTNSCGLFSASPTSKGRKLQFHEK 60

Query: 61  NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLP- 120
           NIQ+YEAVI +FKSHGFENS IAKLVS+QPSILQS VST+LKPKFDFLQEIGIVGPLLP 
Sbjct: 61  NIQEYEAVICYFKSHGFENSHIAKLVSKQPSILQSIVSTNLKPKFDFLQEIGIVGPLLPK 120

Query: 121 ------------------------KEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL 180
                                   KEMLESDEKV  AICRASWILSANSKGTMRSN DVL
Sbjct: 121 VILSNPGILFRSVNSQLKPTFRLIKEMLESDEKVTVAICRASWILSANSKGTMRSNFDVL 180

Query: 181 VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS 240
           VSEGVPSTNIAKMIALNPRSIMRNV R+IHAVKTVKELGVEPKDR FVYAVSAVGSM+ S
Sbjct: 181 VSEGVPSTNIAKMIALNPRSIMRNVGRMIHAVKTVKELGVEPKDRAFVYAVSAVGSMNHS 240

Query: 241 SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK 300
           SWKKKINVMKSLGWSEKEIFTAFK+ P  LTCSEEKMRDVADFCFNTAKLDP ++I YP 
Sbjct: 241 SWKKKINVMKSLGWSEKEIFTAFKRYPLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPV 300

Query: 301 FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIA--RWFIRGEREFVENNVVKHLDEIPNLM 349
           FF  SVDKRL+PRYKV EVLKVKNLLKNK IA   WF++GEREFV+NNVVKHLDEIPNLM
Sbjct: 301 FFNLSVDKRLRPRYKVLEVLKVKNLLKNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLM 360

[Close]

BLAST of Cmc10g0270561 vs. ExPASy TrEMBL
Match: A0A1S3BEV9 (transcription termination factor MTERF5, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488866 PE=3 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 9.3e-150
Identity = 283/372 (76.08%), Postives = 311/372 (83.60%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK 60
           MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDE+
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60

Query: 61  NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLP- 120
           N+QQY AVIGFFKSHGFE+SQIAKLVSR+PSIL STVST+LKPKF+FLQEIGIVGPLL  
Sbjct: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLTK 120

Query: 121 ------------------------KEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL 180
                                   KEML SD+KV AAICR SW+L++NS GT+RSNIDVL
Sbjct: 121 LILSNYMILFRSLDSQLKPTFRLIKEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180

Query: 181 VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS 240
           VSEGVPSTNIA++IALNPRS+MR VDR+I AVKTVKELGVEPKD  FVYAVS   SMSDS
Sbjct: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240

Query: 241 SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK 300
           +WKKKINVMKSLGWSE EIFTAFK+ P FLTCSEEKMRD+ADFC NTAKLDP ++I YP+
Sbjct: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 300

Query: 301 FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIARWFIRGEREFVENNVVKHLDEIPNLMDI 348
           FF  SV KRL+PRYKV EVLK+KNLLK KNI   F+ GER FVE  +VKH D+IPNL+DI
Sbjct: 301 FFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLLFVEGERRFVEKYIVKHFDKIPNLIDI 360

[Close]

BLAST of Cmc10g0270561 vs. ExPASy TrEMBL
Match: A0A5A7SY07 (Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002660 PE=3 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.7e-143
Identity = 275/375 (73.33%), Postives = 305/375 (81.33%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK 60
           MFKFSSTFLLHFIQKRF NTVSTSTLPLAS+ST++FLTNSCGLSSGSP S GRKLQFDEK
Sbjct: 1   MFKFSSTFLLHFIQKRFFNTVSTSTLPLASISTVEFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLP- 120
           N QQY AVI F KSHGFEN+QIA LVSR+PSILQS VST+LKP+F+FLQEIG+VGPLLP 
Sbjct: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPK 120

Query: 121 ------------------------KEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL 180
                                   KE+LESDE+V AAICR   +L  + KG ++SNID+L
Sbjct: 121 FILSTPWVLGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180

Query: 181 VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS 240
            SEGVPS NIA+MI   PR+I R VDR+I+AVK VKELG+EPK   FVYAV    SMSDS
Sbjct: 181 ASEGVPSRNIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLSMSDS 240

Query: 241 SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK 300
           +WKKKI VMKSLGWSEKEIFTAFKKDPT+L CSEEKMRDVADFCFNTAKLDP +VI YP 
Sbjct: 241 TWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPM 300

Query: 301 FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNI--ARWFIRGEREFVENNVVKHLDEIPNLM 349
           FF+ SVDKRL+ RYKV EVLKVKNLLKN+ I    WF++GEREFV+NNVVKHLDEIPNLM
Sbjct: 301 FFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFVKNNVVKHLDEIPNLM 360

[Close]

BLAST of Cmc10g0270561 vs. ExPASy TrEMBL
Match: A0A5D3CZZ2 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002630 PE=3 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 7.9e-141
Identity = 272/372 (73.12%), Postives = 305/372 (81.99%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK 60
           MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVST++FLTNSCGLSSGSP S GRKLQFDEK
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTVEFLTNSCGLSSGSPTSNGRKLQFDEK 60

Query: 61  NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLP- 120
           NIQQYEAVIGF KSHG EN QIAKLVSR+P ILQS V T+LKPKF+FLQE G VGPLLP 
Sbjct: 61  NIQQYEAVIGFLKSHGLENPQIAKLVSRKPWILQSKVPTNLKPKFEFLQETGFVGPLLPK 120

Query: 121 ------------------------KEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL 180
                                   KEMLESDEKV AAI R++W+L++N KG +RSNID L
Sbjct: 121 VILTNPGILLRSLDSHLKPSFRLIKEMLESDEKVIAAIFRSTWLLTSN-KGNLRSNIDAL 180

Query: 181 VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS 240
           VSEGV S NIAKMI ++PR+I+ NVDR I+AVKTVKELG+EP+D TFV  ++A+ S  DS
Sbjct: 181 VSEGVSSRNIAKMIEIDPRTIIVNVDRTINAVKTVKELGIEPRDCTFVRTLNALLSKRDS 240

Query: 241 SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK 300
           + KKKINVMKSLGWSEKEIFTAFK+ P +LTCSEEK+RDVA F  NTAKLD  ++I YP 
Sbjct: 241 NLKKKINVMKSLGWSEKEIFTAFKRFPPYLTCSEEKLRDVAYFFSNTAKLDRGTLITYPV 300

Query: 301 FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIARWFIRGEREFVENNVVKHLDEIPNLMDI 348
           FF+ SVDKRL+PRYKVFE L VKNLLKNKNIARWFI+GEREFVE NVVKHLDEIPNLMD+
Sbjct: 301 FFKYSVDKRLQPRYKVFEALTVKNLLKNKNIARWFIQGEREFVEENVVKHLDEIPNLMDV 360

[Close]

BLAST of Cmc10g0270561 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 157.9 bits (398), Expect = 1.5e-38
Identity = 101/333 (30.33%), Postives = 162/333 (48.65%), Query Frame = 0


Query: 33  TIQFLTNSCGLSSGSPISRGRKLQFDEKNIQQYEAVIGFFKSHGFENSQIAKLVSRQPSI 92
           T+ +L +SCGLS  S     RKL  D    ++   V+   + HGF  +QI+ LV ++P +
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLDSP--ERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 93  LQSTVSTDLKPKFDFLQEIGI--------------------VGPLLP-----KEMLESDE 152
           L +   + L PK  F   IG+                    V  L+P     K +L+SDE
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 153 KVAAAICRASWILSANSKGTMRSNIDVLVSEGVPSTNIAKMIALNPRSIMRNVDRIIHAV 212
           K+ AA+ R +W+   +    +  NI+ +   GVP   I  ++   P ++M+         
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 213 KTVKELGVEPKDRTFVYAVSAV-GSMSDSSWKKKINVMKSLGWSEKEIFTAFKKDPTFLT 272
           K  +E+G  P+  TFV A+ A+ G  + S W K   V +  GWSE +I  AFKK P  + 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 273 CSEEKMRDVADFCFNTAKLDPESVIIYPKFFQCSVDKRLKPRYKVFEVLKVKNLLKNK-N 332
            SE K+    ++  N   + P S+   P     S++KR+ PR  V +VL    L+K   +
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 333 IARWFIRGEREFVENNVVKHLDEIPNLMDIYRG 339
           +    +  E+ F+E  V+K+ +E+P LM++Y G
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]

BLAST of Cmc10g0270561 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 122.9 bits (307), Expect = 5.2e-28
Identity = 86/340 (25.29%), Postives = 152/340 (44.71%), Query Frame = 0


Query: 27  PLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEKNIQQYEAVIGFFKSHGFENSQIAKLV 86
           P     T+ +L +SCGLS  S  S  R ++    + ++ ++V+  FK HGF N QI  ++
Sbjct: 52  PCLESFTVSYLVDSCGLSLESAKSNSRFVKL--VSSKKPDSVLALFKDHGFTNDQITSVI 111

Query: 87  SRQPSILQSTVSTDLKPKFDFLQEIG--------------------IVGPLLP-----KE 146
              P +L  +    + PK  F   IG                    +   L+P     K 
Sbjct: 112 KSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKS 171

Query: 147 MLESDEKVAAAICRASWILSANSKGTMRSNIDVLVSEGVPSTNIAKMIALNPRSIMRNVD 206
           +L  +E V   + R     S      +   + +    GVP  +I  ++  +P +      
Sbjct: 172 ILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRER 231

Query: 207 RIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDSSWKKKINVMKSLGWSEKEIFTAFKKD 266
           R    +  V   G +PK   FV+A+ A    S+S+ ++K  + +  GWS+++   A  + 
Sbjct: 232 RFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRF 291

Query: 267 PTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPKFFQCSVDKRLKPRYKVFEVLKVKNLL 326
           P  +T S+EK+    ++  N   L    ++  P     S++KR+KPR +V  +L  K L+
Sbjct: 292 PNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLV 351

Query: 327 KNKNIARWFI--RGEREFVENNVVKHLDEIPNLMDIYRGN 340
           K ++I  + I      EF++  V+K+ DE+P L+  +  N
Sbjct: 352 KKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389

[Close]

BLAST of Cmc10g0270561 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 107.8 bits (268), Expect = 1.7e-23
Identity = 81/302 (26.82%), Postives = 143/302 (47.35%), Query Frame = 0


Query: 60  KNIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLP 119
           K+++Q  +VI   KS+ F ++QI K +   P ++   V   L+PK  F ++IG  G  L 
Sbjct: 66  KSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLG 125

Query: 120 K---------------------EMLES-----DEKVAAAICRASW-ILSANSKGTMRSNI 179
           K                     E+L+S      E +   + R  W +LS +    +  NI
Sbjct: 126 KFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNI 185

Query: 180 DVLVSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSM 239
             L + G+  + +A ++   PR    + +++   V    +LG     R  V+AV ++ S+
Sbjct: 186 SYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSL 245

Query: 240 SDSSWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVII 299
           S+ ++ +K+ +  + G+SE EI    ++ P  + CSE+K+    +F      L+ E++  
Sbjct: 246 SEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAK 305

Query: 300 YPKFFQCSVDKRLKPRYKVFEVLKVKNLL-----KNKNIARWFIRGEREFVENNVVKHLD 330
            P     +++KR+ PR KV ++L+ K LL     K KN+       E  F+E  VV+  D
Sbjct: 306 RPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGD 365

[Close]

BLAST of Cmc10g0270561 vs. TAIR 10
Match: AT1G61990.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 100.1 bits (248), Expect = 3.6e-21
Identity = 91/394 (23.10%), Postives = 175/394 (44.42%), Query Frame = 0


Query: 13  IQKRFLNTVSTSTLPLASVS----------TIQFLTNSCGLSSGSPISRGRKLQFDEKNI 72
           +Q  F+ + S S+   A VS          T+ +L +S GLS     S  RK+ F++K  
Sbjct: 24  VQNAFVLSNSFSSARAADVSIRDGRKGKNFTVSYLVDSLGLSKKLAESISRKVSFEDK-- 83

Query: 73  QQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQE-----------I 132
              ++V+  F+S+GF +SQI+ +++  P +L +     L  K   LQ            +
Sbjct: 84  VNPDSVLSLFRSYGFTDSQISTIITDYPLLLVADAKKALGRKLQILQSRGASSSEITEIV 143

Query: 133 GIVGPLLPKEML----ESDEKVAAAICRASWILSANSKGTMRSNIDVLVSEGVPSTNIAK 192
             V  +L K+ +    ++ + +  A   +S+ L   S+G    N+  L   G+PS  +  
Sbjct: 144 STVPRILGKKSITVYYDAVKDIIVADTSSSYELPQGSQGNKIRNVSALRELGMPSRLLLP 203

Query: 193 MIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDSSWKKKINVMKSL 252
           ++    + +    +    ++K V E+G +P    FV A+  +  MS+ + ++K+ V +SL
Sbjct: 204 LLVSKSQPVC-GKENFDASLKKVVEMGFDPTTTKFVLALRMLYQMSEKTIEEKVVVFRSL 263

Query: 253 GWSEKEIFTAFKKDPTFLTCSEEKMRDVA------------------------------- 312
           G++  +++  FKK P+ L  S++K+   A                               
Sbjct: 264 GFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVKRYPPCIEYSVESV 323

Query: 313 ----DFCFNTAKLDPESVIIYPKFFQCSVDKRLKPRYKVFEVLKVKNLLKNKN----IAR 343
               +F     K    +++++P+ F  S++KR+ PR  + E L  K LL+  +    ++ 
Sbjct: 324 KKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSKGLLRKGSELPAVSS 383

[Close]

BLAST of Cmc10g0270561 vs. TAIR 10
Match: AT3G46950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 100.1 bits (248), Expect = 3.6e-21
Identity = 102/421 (24.23%), Postives = 173/421 (41.09%), Query Frame = 0


Query: 12  FIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEKNIQQYEAVIGF 71
           F  K F +T++  + P  S  T+ +L  S GL+     +  +K+ F++K     ++V+  
Sbjct: 33  FTTKSFSSTIAKDSSPKGSTFTVSYLVESLGLTKKLAETISKKVTFEDK--VNPDSVLNL 92

Query: 72  FKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGI-----------VGPLLPK 131
            +S+GF++SQI++++   P +L +     L+PK  FL+  G            V  +L K
Sbjct: 93  LRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVPTILDK 152

Query: 132 EMLES-------------DEKVAAAICRASWILSANSKGTMRSNIDVLVSEGVPSTNIAK 191
           +  ES             D K     C          KG    NI VL   GVP   +  
Sbjct: 153 KGEESVSLYYDFVKDIMQDGKSLCISC------PEGKKGNRIRNISVLRELGVPQKLLFS 212

Query: 192 MIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDSSWKKKINVMKSL 251
           ++    + +    ++   ++K V ++G +P    FV A+  V  MS+ + ++K+NV K L
Sbjct: 213 LLISRYQPVC-GKEKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVYKRL 272

Query: 252 GWSEKEIFTAFKKDPTFLTCSEEK---MRDVADFC-------FNTAKLDP---------- 311
           G+SE EI+  FKK P FL  SE+K   M +    C        +  K  P          
Sbjct: 273 GFSEAEIWAIFKKWPYFLKFSEKKIILMFETLKKCGLVEEEIISVLKSRPQCIRSSEQKI 332

Query: 312 --------------------------------------------------ESVIIYPKFF 337
                                                             E+V++ P   
Sbjct: 333 LDSIEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLRKKFEVLVKMMNWPLEAVVMIPTVL 392

The following BLAST results are available for this feature:

BLAST of Cmc10g0270561 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034158.1	5.2e-187	93.30	transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15761.1 t...	[more]
KAA0034139.1	4.5e-159	81.33	transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15780.1 t...	[more]
XP_008446012.1	1.9e-149	76.08	PREDICTED: transcription termination factor MTERF5, chloroplastic-like isoform X...	[more]
KAE8648669.1	1.7e-145	74.73	hypothetical protein Csa_007829 [Cucumis sativus]	[more]
KAE8648655.1	1.9e-144	74.19	hypothetical protein Csa_008541 [Cucumis sativus]	[more]

BLAST of Cmc10g0270561 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FM80	2.1e-10	22.63	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9FK23	6.0e-05	19.88	Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4JVI3	6.7e-04	21.89	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of Cmc10g0270561 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SU45	2.5e-187	93.30	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CWN7	2.2e-159	81.33	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BEV9	9.3e-150	76.08	transcription termination factor MTERF5, chloroplastic-like isoform X1 OS=Cucumi...	[more]
A0A5A7SY07	1.7e-143	73.33	Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CZZ2	7.9e-141	73.12	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Cmc10g0270561 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	1.5e-38	30.33	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	5.2e-28	25.29	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	1.7e-23	26.82	Mitochondrial transcription termination factor family protein	[more]
AT1G61990.1	3.6e-21	23.10	Mitochondrial transcription termination factor family protein	[more]
AT3G46950.1	3.6e-21	24.23	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 267..298 e-value: 0.3 score: 20.2 coord: 200..230 e-value: 270.0 score: 8.3 coord: 130..161 e-value: 290.0 score: 8.1 coord: 83..114 e-value: 0.0017 score: 27.6 coord: 235..266 e-value: 520.0 score: 6.1 coord: 166..196 e-value: 1.9 score: 17.5
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 70..196 e-value: 4.9E-13 score: 48.7 coord: 144..308 e-value: 1.6E-20 score: 73.3
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 7..120
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 120..340
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 121..329 e-value: 6.4E-40 score: 139.0 coord: 51..120 e-value: 3.5E-11 score: 44.7
None	No IPR available	PANTHER	PTHR13068:SF31	TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKE	coord: 7..120
None	No IPR available	PANTHER	PTHR13068:SF31	TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKE	coord: 120..340

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0270561.1	Cmc10g0270561.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding