Cmc10g0270321 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0270321
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr10: 4517927 .. 4518742 (+)
RNA-Seq ExpressionCmc10g0270321
SyntenyCmc10g0270321
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATGCAAAGCCAGAGAGAAAGGGAAGGAAGGAAGGAAGGAAGGAAGATTAATTCCAAAAATTAAAGAAGAAATACTCACAAGAATGTCGAGAGCTTGAAAATTGGAAGCGAACCAGGCGGCGAAGGCAACAATGGAGTCGGGATCGGAAACATCAAGACGGCGGAACAAGACATGGCCTAGTCCTTCATTTCGCAGCGTTTCAACGGCTTTTAATCCTCTTACTTCATCTCTAGCCGTTAATACGACAGTGAGTTCCGATTGCGCTAATTTCCTAACTAGGGCAAATCCTATGCCCTTATTCGCTCCGGTGACGATCGCGACCGTGTTCTTCGACCACCACCTGCCAGGTGAGTAATTAAAAACAAGATTGAGAGAAAGAGGAACGAAAGGTGTGTGTGTGTAGTGATTAGAAAGAGAAACGATGAGGTGGATGGATGGGTGATTAAATTGGAATCTTACCTGTGGGAGGAGAGGGAAGAAGAGAGGTCAAATTCTTTGGAATCCATGGAAGAAGAAATGAGGGAATAAAGAAAAGGGCATGGGGATTGAGGAAGTGAATAAGAAGGAGAAGAAAAAGAAGAAGAAGAAGGGAGGAATATATAGAGAGATAGGGGAATGAGGAGAAGCCAAGTGGGAAACTGAAGAACAAAAAAAGAGGGAACGTGGGAGGTGAGAGAACCGTAGGCCCCGCCCCGTCACACCCATTTATAAACTCTTCCTTAGAGAGGGACATAATTTTGTACGGTTTAATTCATTGTTAAACCTTTTTGTTGTTTGTTTACACCTAAATAGTTTCGTTATTGTTTAATTATTG

mRNA sequence

TGATGCAAAGCCAGAGAGAAAGGGAAGGAAGGAAGGAAGGAAGGAAGATTAATTCCAAAAATTAAAGAAGAAATACTCACAAGAATGTCGAGAGCTTGAAAATTGGAAGCGAACCAGGCGGCGAAGGCAACAATGGAGTCGGGATCGGAAACATCAAGACGGCGGAACAAGACATGGCCTAGTCCTTCATTTCGCAGCGTTTCAACGGCTTTTAATCCTCTTACTTCATCTCTAGCCGTTAATACGACAGTGAGTTCCGATTGCGCTAATTTCCTAACTAGGGCAAATCCTATGCCCTTATTCGCTCCGGTGACGATCGCGACCGTGTTCTTCGACCACCACCTGCCAGGTGAGTAATTAAAAACAAGATTGAGAGAAAGAGGAACGAAAGGTGTGTGTGTGTAGTGATTAGAAAGAGAAACGATGAGGTGGATGGATGGGTGATTAAATTGGAATCTTACCTGTGGGAGGAGAGGGAAGAAGAGAGGTCAAATTCTTTGGAATCCATGGAAGAAGAAATGAGGGAATAAAGAAAAGGGCATGGGGATTGAGGAAGTGAATAAGAAGGAGAAGAAAAAGAAGAAGAAGAAGGGAGGAATATATAGAGAGATAGGGGAATGAGGAGAAGCCAAGTGGGAAACTGAAGAACAAAAAAAGAGGGAACGTGGGAGGTGAGAGAACCGTAGGCCCCGCCCCGTCACACCCATTTATAAACTCTTCCTTAGAGAGGGACATAATTTTGTACGGTTTAATTCATTGTTAAACCTTTTTGTTGTTTGTTTACACCTAAATAGTTTCGTTATTGTTTAATTATTG

Coding sequence (CDS)

ATGGAGTCGGGATCGGAAACATCAAGACGGCGGAACAAGACATGGCCTAGTCCTTCATTTCGCAGCGTTTCAACGGCTTTTAATCCTCTTACTTCATCTCTAGCCGTTAATACGACAGTGAGTTCCGATTGCGCTAATTTCCTAACTAGGGCAAATCCTATGCCCTTATTCGCTCCGGTGACGATCGCGACCGTGTTCTTCGACCACCACCTGCCAGGTGAGTAA

Protein sequence

MESGSETSRRRNKTWPSPSFRSVSTAFNPLTSSLAVNTTVSSDCANFLTRANPMPLFAPVTIATVFFDHHLPGE
Homology
[Close]
BLAST of Cmc10g0270321 vs. NCBI nr
Match: RWW16828.1 (hypothetical protein GW17_00019268 [Ensete ventricosum])

HSP 1 Score: 69.7 bits (169), Expect = 1.2e-08
Identity = 43/74 (58.11%), Postives = 49/74 (66.22%), Query Frame = 0 

Query: 1   MESGSETSRRRNKT---WPSPSFRSVSTAFNPLTSSLAVNTTVSSDCANFLTRANPMPLF 60
           ++ GS TS+ +N T   WPS      STA  PL +SL V+TTVS   AN LT ANPMPL 
Sbjct: 70  IDEGSATSKWQNATRSPWPSRD----STAAFPLPTSLEVSTTVSPSSANLLTSANPMPLL 129

Query: 61  APVTIATVFFDHHL 72
           APVT ATV FDHHL
Sbjct: 130 APVTTATVSFDHHL 139

[Close]
BLAST of Cmc10g0270321 vs. NCBI nr
Match: RRT45616.1 (hypothetical protein B296_00055003 [Ensete ventricosum])

HSP 1 Score: 69.7 bits (169), Expect = 1.2e-08
Identity = 43/74 (58.11%), Postives = 49/74 (66.22%), Query Frame = 0 

Query: 1   MESGSETSRRRNKT---WPSPSFRSVSTAFNPLTSSLAVNTTVSSDCANFLTRANPMPLF 60
           ++ GS TS+ +N T   WPS      STA  PL +SL V+TTVS   AN LT ANPMPL 
Sbjct: 71  IDEGSATSKWQNATRSPWPSRD----STAAFPLPTSLEVSTTVSPSSANLLTSANPMPLL 130

Query: 61  APVTIATVFFDHHL 72
           APVT ATV FDHHL
Sbjct: 131 APVTTATVSFDHHL 140

[Close]
BLAST of Cmc10g0270321 vs. NCBI nr
Match: RWW81038.1 (hypothetical protein BHE74_00010596 [Ensete ventricosum] >RZS24457.1 hypothetical protein BHM03_00057526 [Ensete ventricosum])

HSP 1 Score: 69.7 bits (169), Expect = 1.2e-08
Identity = 43/74 (58.11%), Postives = 49/74 (66.22%), Query Frame = 0 

Query: 1   MESGSETSRRRNKT---WPSPSFRSVSTAFNPLTSSLAVNTTVSSDCANFLTRANPMPLF 60
           ++ GS TS+ +N T   WPS      STA  PL +SL V+TTVS   AN LT ANPMPL 
Sbjct: 71  IDEGSATSKWQNATRSPWPSRD----STAAFPLPTSLEVSTTVSPSSANLLTSANPMPLL 130

Query: 61  APVTIATVFFDHHL 72
           APVT ATV FDHHL
Sbjct: 131 APVTTATVSFDHHL 140

[Close]
BLAST of Cmc10g0270321 vs. ExPASy TrEMBL
Match: A0A426Y1J9 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00055003 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.8e-09
Identity = 43/74 (58.11%), Postives = 49/74 (66.22%), Query Frame = 0 

Query: 1   MESGSETSRRRNKT---WPSPSFRSVSTAFNPLTSSLAVNTTVSSDCANFLTRANPMPLF 60
           ++ GS TS+ +N T   WPS      STA  PL +SL V+TTVS   AN LT ANPMPL 
Sbjct: 71  IDEGSATSKWQNATRSPWPSRD----STAAFPLPTSLEVSTTVSPSSANLLTSANPMPLL 130

Query: 61  APVTIATVFFDHHL 72
           APVT ATV FDHHL
Sbjct: 131 APVTTATVSFDHHL 140

[Close]
BLAST of Cmc10g0270321 vs. ExPASy TrEMBL
Match: A0A444F2I2 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00019268 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.8e-09
Identity = 43/74 (58.11%), Postives = 49/74 (66.22%), Query Frame = 0 

Query: 1   MESGSETSRRRNKT---WPSPSFRSVSTAFNPLTSSLAVNTTVSSDCANFLTRANPMPLF 60
           ++ GS TS+ +N T   WPS      STA  PL +SL V+TTVS   AN LT ANPMPL 
Sbjct: 70  IDEGSATSKWQNATRSPWPSRD----STAAFPLPTSLEVSTTVSPSSANLLTSANPMPLL 129

Query: 61  APVTIATVFFDHHL 72
           APVT ATV FDHHL
Sbjct: 130 APVTTATVSFDHHL 139

The following BLAST results are available for this feature:
BLAST of Cmc10g0270321 vs. NCBI nr
Match NameE-valueIdentityDescription
RWW16828.11.2e-0858.11hypothetical protein GW17_00019268 [Ensete ventricosum][more]
RRT45616.11.2e-0858.11hypothetical protein B296_00055003 [Ensete ventricosum][more]
RWW81038.11.2e-0858.11hypothetical protein BHE74_00010596 [Ensete ventricosum] >RZS24457.1 hypothetica... [more]
BLAST of Cmc10g0270321 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc10g0270321 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A426Y1J95.8e-0958.11Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00055003 PE=4 SV=1[more]
A0A444F2I25.8e-0958.11Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00019268 PE=4 SV=1[more]
BLAST of Cmc10g0270321 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0270321.1Cmc10g0270321.1mRNA