Cmc10g0270171 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0270171
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionChlorophyll a-b binding protein, chloroplastic
LocationCMiso1.1chr10: 4459261 .. 4460910 (+)
RNA-Seq ExpressionCmc10g0270171
SyntenyCmc10g0270171
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATCAGATTCTCTAATCCACGTGGCAACCGATGTAACCAATTACAAATCCCCTCTCCTATCCATTAAGATAAGGCCATGCATACATTAACAAACTCAAAAATTTCAACTCAAACAATCCTCCACACAACCAAACCAACCATCTCCGTCACTCCCCAATTTTTTCTTTTAGAAGAAACCATTAATGGCTTCCGCTTGTGCTTCTTCCGCCATTGCCGCCGTGGCAATTTCTTCGTCAAGGCAAGCTTTTTTTTTTTTTTTTTTTTTTTTTTCACTTGTTCATTCTTTAATTTAGTTTAATTTCTCCCATCCAATTTAATTCATTATTTATGATTTTTTTTTCTTCCATTTTATCAGTTCATCGAAGAATGGCTGCCCCAAGCTGGCTTCTAACTTCCTTGCTGGCAAGAAGCTTAGGCTGAGAAACTTAAATGCTGCTGCTGTCGTTGCTCCTCGATCCGCTCCGGTATGCGCCGCAGCCGATCCCGATAGACCTCTTTGGTTCCCTGGCAGCACCCCTCCTCCGTGGCTCGATGGCAGCCTTCCCGGTGACTTTGGCTTTGACCCTCTTGGTCTTGGTTAGTATTAAAACTACTAACTATACTGGACTCAAATAATAAGGATTGGTTTATTTAAGTTCTTAGGGCGATTAATTAAAAATTAATGTTGAAGTTAGTATAGAGAAGAGATAATTCTTACGGTGTTTATTCTGTGTAGCGTCTGATCCGGAAAGTTTGAGATGGAACCAACAGGCGGAGCTCGTACACTGCCGATGGGCAATGTTGGGGGCAGCAGGAATTTTCATCCCGGAATTCTTGACAAAGATCGGTATATTGAACACTCCTTCGTGGTACTCCGCCGGTGAATTGGAATATTTCACCGACACCACCACTCTATTCATAGTGGAACTCATTTTCATCGGTTGGGCCGAGGGTAGACGGTGGGCCGACATCCTCAAACCCGGCTGCGTCAACACCGACCCGATTTTCCCTAACAACAAACTGACCGGAACCGACGTCGGGTACCCTGGTGGGCTCTGGTTTGACCCACTCGGATGGGGCAGCGGATCACCGGAAAAGATTAAGGAATTGAGAACGAAAGAGATTAAGAACGGACGATTGGCTATGTTGGCGGTGATGGGAGCTTGGTTCCAACACATTTACACGGGCACCGGTCCCATTGATAACCTTTTCGCTCACCTTGCCGATCCCGGCCACGCCACCGTCTTCGCCGTGAGTTTCCTTTTCTTTCTTACAATAAGAAATAATATTTTTTTAAAAAAAATAAATTAATTTTGGGTTTTGATTTTAATTTAGTAGTAATTTAATTTTTAAAACGATAATAAAAATGTTGAAAATAATTTTAAGATAATTGTGTTTTAATTGATGGGTTGGTTTTTGTTTTGGCAGGCATTCACACCAAAGTGAAGAAATTGGGGAGCAAATAGGAGAGATGTAGTGATGTGTTGTTGTGAGTTGAGGGACACAAATTTATGTATTGAATCACAACTTTGATCTAATCTCTGTGTTTATGTGTATGATGGACCATATCATTATCAATTTAATGTACAAAATGAGATCAAAAAATTAATTAAGCAAATTTAGGCCCATATATTGACTTCTATCAACCTATTTTAACCATATTTAATCGTA

mRNA sequence

TATCAGATTCTCTAATCCACGTGGCAACCGATGTAACCAATTACAAATCCCCTCTCCTATCCATTAAGATAAGGCCATGCATACATTAACAAACTCAAAAATTTCAACTCAAACAATCCTCCACACAACCAAACCAACCATCTCCGTCACTCCCCAATTTTTTCTTTTAGAAGAAACCATTAATGGCTTCCGCTTGTGCTTCTTCCGCCATTGCCGCCGTGGCAATTTCTTCGTCAAGTTCATCGAAGAATGGCTGCCCCAAGCTGGCTTCTAACTTCCTTGCTGGCAAGAAGCTTAGGCTGAGAAACTTAAATGCTGCTGCTGTCGTTGCTCCTCGATCCGCTCCGGTATGCGCCGCAGCCGATCCCGATAGACCTCTTTGGTTCCCTGGCAGCACCCCTCCTCCGTGGCTCGATGGCAGCCTTCCCGGTGACTTTGGCTTTGACCCTCTTGGTCTTGCGTCTGATCCGGAAAGTTTGAGATGGAACCAACAGGCGGAGCTCGTACACTGCCGATGGGCAATGTTGGGGGCAGCAGGAATTTTCATCCCGGAATTCTTGACAAAGATCGGTATATTGAACACTCCTTCGTGGTACTCCGCCGGTGAATTGGAATATTTCACCGACACCACCACTCTATTCATAGTGGAACTCATTTTCATCGGTTGGGCCGAGGGTAGACGGTGGGCCGACATCCTCAAACCCGGCTGCGTCAACACCGACCCGATTTTCCCTAACAACAAACTGACCGGAACCGACGTCGGGTACCCTGGTGGGCTCTGGTTTGACCCACTCGGATGGGGCAGCGGATCACCGGAAAAGATTAAGGAATTGAGAACGAAAGAGATTAAGAACGGACGATTGGCTATGTTGGCGGTGATGGGAGCTTGGTTCCAACACATTTACACGGGCACCGGTCCCATTGATAACCTTTTCGCTCACCTTGCCGATCCCGGCCACGCCACCGTCTTCGCCGCATTCACACCAAAGTGAAGAAATTGGGGAGCAAATAGGAGAGATGTAGTGATGTGTTGTTGTGAGTTGAGGGACACAAATTTATGTATTGAATCACAACTTTGATCTAATCTCTGTGTTTATGTGTATGATGGACCATATCATTATCAATTTAATGTACAAAATGAGATCAAAAAATTAATTAAGCAAATTTAGGCCCATATATTGACTTCTATCAACCTATTTTAACCATATTTAATCGTA

Coding sequence (CDS)

ATGGCTTCCGCTTGTGCTTCTTCCGCCATTGCCGCCGTGGCAATTTCTTCGTCAAGTTCATCGAAGAATGGCTGCCCCAAGCTGGCTTCTAACTTCCTTGCTGGCAAGAAGCTTAGGCTGAGAAACTTAAATGCTGCTGCTGTCGTTGCTCCTCGATCCGCTCCGGTATGCGCCGCAGCCGATCCCGATAGACCTCTTTGGTTCCCTGGCAGCACCCCTCCTCCGTGGCTCGATGGCAGCCTTCCCGGTGACTTTGGCTTTGACCCTCTTGGTCTTGCGTCTGATCCGGAAAGTTTGAGATGGAACCAACAGGCGGAGCTCGTACACTGCCGATGGGCAATGTTGGGGGCAGCAGGAATTTTCATCCCGGAATTCTTGACAAAGATCGGTATATTGAACACTCCTTCGTGGTACTCCGCCGGTGAATTGGAATATTTCACCGACACCACCACTCTATTCATAGTGGAACTCATTTTCATCGGTTGGGCCGAGGGTAGACGGTGGGCCGACATCCTCAAACCCGGCTGCGTCAACACCGACCCGATTTTCCCTAACAACAAACTGACCGGAACCGACGTCGGGTACCCTGGTGGGCTCTGGTTTGACCCACTCGGATGGGGCAGCGGATCACCGGAAAAGATTAAGGAATTGAGAACGAAAGAGATTAAGAACGGACGATTGGCTATGTTGGCGGTGATGGGAGCTTGGTTCCAACACATTTACACGGGCACCGGTCCCATTGATAACCTTTTCGCTCACCTTGCCGATCCCGGCCACGCCACCGTCTTCGCCGCATTCACACCAAAGTGA

Protein sequence

MASACASSAIAAVAISSSSSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Homology
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BLAST of Cmc10g0270171 vs. NCBI nr
Match: XP_008446036.1 (PREDICTED: chlorophyll a-b binding protein 7, chloroplastic [Cucumis melo])

HSP 1 Score: 560.1 bits (1442), Expect = 1.1e-155
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCAAA 60
           MASACASSAIAAVAISSSSSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCAAA
Sbjct: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCAAA 60

Query: 61  DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI 120
           DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI
Sbjct: 61  DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI 120

Query: 121 FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD 180
           FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD
Sbjct: 121 FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD 180

Query: 181 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI 240
           PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI
Sbjct: 181 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI 240

Query: 241 YTGTGPIDNLFAHLADPGHATVFAAFTPK 270
           YTGTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 YTGTGPIDNLFAHLADPGHATVFAAFTPK 269

[Close]
BLAST of Cmc10g0270171 vs. NCBI nr
Match: XP_004135326.1 (chlorophyll a-b binding protein 7, chloroplastic [Cucumis sativus] >KGN51671.1 hypothetical protein Csa_008664 [Cucumis sativus])

HSP 1 Score: 549.7 bits (1415), Expect = 1.4e-152
Identity = 265/271 (97.79%), Postives = 267/271 (98.52%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLAGKKLRLRNLNAA--AVVAPRSAPVCA 60
           MASACASSAIAAVAISSSSSSKNGCPKLASNFL GKKLRLRNLNAA  AVVAPR+ PVCA
Sbjct: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCA 60

Query: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120
           AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA
Sbjct: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120

Query: 121 GIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180
           GIFIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN
Sbjct: 121 GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180

Query: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFTPK 270
           HIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFTPK 271

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BLAST of Cmc10g0270171 vs. NCBI nr
Match: TYK15728.1 (chlorophyll a-b binding protein 7 [Cucumis melo var. makuwa])

HSP 1 Score: 542.3 bits (1396), Expect = 2.3e-150
Identity = 262/264 (99.24%), Postives = 262/264 (99.24%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCAAA 60
           MASACASSAIAAVAI  SSSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCAAA
Sbjct: 1   MASACASSAIAAVAI--SSSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCAAA 60

Query: 61  DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI 120
           DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI
Sbjct: 61  DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI 120

Query: 121 FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD 180
           FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD
Sbjct: 121 FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD 180

Query: 181 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI 240
           PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI
Sbjct: 181 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI 240

Query: 241 YTGTGPIDNLFAHLADPGHATVFA 265
           YTGTGPIDNLFAHLADPGHATVFA
Sbjct: 241 YTGTGPIDNLFAHLADPGHATVFA 262

[Close]
BLAST of Cmc10g0270171 vs. NCBI nr
Match: XP_038892923.1 (chlorophyll a-b binding protein 7, chloroplastic [Benincasa hispida])

HSP 1 Score: 540.8 bits (1392), Expect = 6.6e-150
Identity = 260/268 (97.01%), Postives = 261/268 (97.39%), Query Frame = 0 

Query: 2   ASACASSAIAAVAISSSSSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCAAAD 61
           +SACASSAIAAVAISSSSS KNGCPK ASNFL GKKLRLRNL AA  VAPRS PVCAAAD
Sbjct: 7   SSACASSAIAAVAISSSSSQKNGCPK-ASNFLTGKKLRLRNLTAATAVAPRSVPVCAAAD 66

Query: 62  PDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIF 121
           PDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIF
Sbjct: 67  PDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIF 126

Query: 122 IPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDP 181
           IPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDP
Sbjct: 127 IPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDP 186

Query: 182 IFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIY 241
           IFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIY
Sbjct: 187 IFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIY 246

Query: 242 TGTGPIDNLFAHLADPGHATVFAAFTPK 270
           TGTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 247 TGTGPIDNLFAHLADPGHATVFAAFTPK 273

[Close]
BLAST of Cmc10g0270171 vs. NCBI nr
Match: XP_022957420.1 (chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata] >XP_022998486.1 chlorophyll a-b binding protein 7, chloroplastic [Cucurbita maxima] >XP_023515906.1 chlorophyll a-b binding protein 7, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533.9 bits (1374), Expect = 8.1e-148
Identity = 258/269 (95.91%), Postives = 262/269 (97.40%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCAAA 60
           MASACASSAIAAVAISSSSS KNGCPK+ SNFL GK+LRLR   AAA VAPRSAPVCAAA
Sbjct: 1   MASACASSAIAAVAISSSSSQKNGCPKV-SNFLTGKRLRLRKYTAAA-VAPRSAPVCAAA 60

Query: 61  DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI 120
           DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGL+SDPESLRWNQQAELVHCRWAMLGAAGI
Sbjct: 61  DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI 120

Query: 121 FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD 180
           FIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD
Sbjct: 121 FIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD 180

Query: 181 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI 240
           PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI
Sbjct: 181 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI 240

Query: 241 YTGTGPIDNLFAHLADPGHATVFAAFTPK 270
           YTGTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 YTGTGPIDNLFAHLADPGHATVFAAFTPK 267

[Close]
BLAST of Cmc10g0270171 vs. ExPASy Swiss-Prot
Match: P10708 (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB7 PE=3 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 9.1e-134
Identity = 229/271 (84.50%), Postives = 242/271 (89.30%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNG--CPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCA 60
           MASACASS IAAVA SS SS +NG       ++FL G++LR+   +     A  +  VC 
Sbjct: 1   MASACASSTIAAVAFSSPSSRRNGSIVGTTKASFLGGRRLRVSKYSTTP-TARSATTVCV 60

Query: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120
           AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA
Sbjct: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120

Query: 121 GIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180
           GIFIPE LTKIGILNTPSWY+AGE EYFTDTTTLFIVEL+ IGWAEGRRWADI+KPGCVN
Sbjct: 121 GIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVN 180

Query: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP KIKELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFTPK 270
           HIYTGTGPIDNLFAHLADPGHAT+FAAF+PK
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATIFAAFSPK 270

[Close]
BLAST of Cmc10g0270171 vs. ExPASy Swiss-Prot
Match: P13869 (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 1.2e-130
Identity = 227/272 (83.46%), Postives = 240/272 (88.24%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNG--CPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCA 60
           MASACASS IAAVA SS SS KNG       ++FL GK+LR+      A V  RS  V A
Sbjct: 1   MASACASSTIAAVAFSSPSSQKNGSIVGATKASFLGGKRLRVSKF--IAPVGSRSVAVSA 60

Query: 61  -AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGA 120
            AADPDRPLWFPGSTPP WLDGSLPGDFGFDPLGL SDPESL+WN QAELVH RWAMLGA
Sbjct: 61  VAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGA 120

Query: 121 AGIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCV 180
           AGIFIPEFLTKIG+LNTPSWY+AGE EYFTDTTTLF++EL+ IGWAEGRRWADI+KPGCV
Sbjct: 121 AGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCV 180

Query: 181 NTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWF 240
           NTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP KIKELRTKEIKNGRLAMLAVMGAWF
Sbjct: 181 NTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWF 240

Query: 241 QHIYTGTGPIDNLFAHLADPGHATVFAAFTPK 270
           QHIYTGTGPIDNLFAHLADPGHAT+FAAF+PK
Sbjct: 241 QHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 270

[Close]
BLAST of Cmc10g0270171 vs. ExPASy Swiss-Prot
Match: Q9SYW8 (Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA2 PE=1 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 7.0e-126
Identity = 214/269 (79.55%), Postives = 233/269 (86.62%), Query Frame = 0 

Query: 2   ASACASSAIAAVAISSSSSSKNGCPKLASNFLAGKKLRL-RNLNAAAVVAPRSAPVCAAA 61
           +S CASSAIAA++              + +FL GKKLRL + L   AV  P ++    AA
Sbjct: 3   SSLCASSAIAAIS--------------SPSFLGGKKLRLKKKLTVPAVSRPDASVRAVAA 62

Query: 62  DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI 121
           DPDRP+WFPGSTPP WLDGSLPGDFGFDPLGL+SDP+SL+WN QAE+VHCRWAMLGAAGI
Sbjct: 63  DPDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGI 122

Query: 122 FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD 181
           FIPEFLTKIGILNTPSWY+AGE EYFTD TTLF+VELI IGWAEGRRWADI+KPG VNTD
Sbjct: 123 FIPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTD 182

Query: 182 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI 241
           P+FPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQHI
Sbjct: 183 PVFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHI 242

Query: 242 YTGTGPIDNLFAHLADPGHATVFAAFTPK 270
           YTGTGPIDNLFAHLADPGHAT+FAAFTPK
Sbjct: 243 YTGTGPIDNLFAHLADPGHATIFAAFTPK 257

[Close]
BLAST of Cmc10g0270171 vs. ExPASy Swiss-Prot
Match: Q8LCQ4 (Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA6 PE=1 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.6e-82
Identity = 149/269 (55.39%), Postives = 184/269 (68.40%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSS--SSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCA 60
           MA A AS+  + + +S+S   +     P +AS    G +L +R            + VC 
Sbjct: 1   MAFAIASALTSTLTLSTSRVQNPTQRRPHVASTSSTGGRL-MRERLVVVRAGKEVSSVCE 60

Query: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120
              PDRPLWFPGS+PP WLDGSLPGDFGFDPLGL SDP++L+W  QAEL+H RWAML   
Sbjct: 61  PLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVT 120

Query: 121 GIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180
           GI IPE L ++G +   SWY AG  EYF D+TTLF+ +++ +GWAEGRRWAD++KPG V+
Sbjct: 121 GIIIPECLERLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPGSVD 180

Query: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240
            +P +P+      DVGYPGGLWFD + WG GSPE +  LRTKEIKNGRLAMLA +G  FQ
Sbjct: 181 IEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQ 240

Query: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFT 268
             YT   PI+NL AHLADPGH  VF+AFT
Sbjct: 241 ATYTSQDPIENLMAHLADPGHCNVFSAFT 268

[Close]
BLAST of Cmc10g0270171 vs. ExPASy Swiss-Prot
Match: Q9SQL2 (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lhcA-P4 PE=1 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 6.2e-58
Identity = 121/251 (48.21%), Postives = 150/251 (59.76%), Query Frame = 0 

Query: 12  AVAISSSSSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCAAADPDRPLWFPGS 71
           A   + +S++  G   L S FL G   +L N   A      S       +  +  W PG 
Sbjct: 2   ATVTTQASAAIFGPCGLKSRFLGGSSGKL-NRGVAFRPVGCSPSASFKVEAKKGEWLPGL 61

Query: 72  TPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGI 131
             P +L GSLPGD GFDPLGLA DPE+LRW  QAELV+ RWAMLG AG+ +PE  T IGI
Sbjct: 62  ASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGI 121

Query: 132 LNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGT 191
           +N P WY+AG+ EYF  ++TLF++E I   + E RRW DI  PG VN DPIF    L   
Sbjct: 122 INVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAG 181

Query: 192 DVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLF 251
           +VGYPGG+ F+PL +         E + KEI NGRLAMLA +G   QH  TG GP DNL 
Sbjct: 182 EVGYPGGI-FNPLNFA-----PTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLL 241

Query: 252 AHLADPGHATV 263
            H++DP H T+
Sbjct: 242 QHISDPWHNTI 245

[Close]
BLAST of Cmc10g0270171 vs. ExPASy TrEMBL
Match: A0A1S3BDM5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488886 PE=3 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 5.1e-156
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCAAA 60
           MASACASSAIAAVAISSSSSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCAAA
Sbjct: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCAAA 60

Query: 61  DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI 120
           DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI
Sbjct: 61  DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI 120

Query: 121 FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD 180
           FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD
Sbjct: 121 FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD 180

Query: 181 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI 240
           PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI
Sbjct: 181 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI 240

Query: 241 YTGTGPIDNLFAHLADPGHATVFAAFTPK 270
           YTGTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 YTGTGPIDNLFAHLADPGHATVFAAFTPK 269

[Close]
BLAST of Cmc10g0270171 vs. ExPASy TrEMBL
Match: A0A0A0KV98 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_5G589390 PE=3 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 6.9e-153
Identity = 265/271 (97.79%), Postives = 267/271 (98.52%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLAGKKLRLRNLNAA--AVVAPRSAPVCA 60
           MASACASSAIAAVAISSSSSSKNGCPKLASNFL GKKLRLRNLNAA  AVVAPR+ PVCA
Sbjct: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCA 60

Query: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120
           AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA
Sbjct: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120

Query: 121 GIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180
           GIFIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN
Sbjct: 121 GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180

Query: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFTPK 270
           HIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFTPK 271

[Close]
BLAST of Cmc10g0270171 vs. ExPASy TrEMBL
Match: A0A5D3CWU8 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002270 PE=3 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.1e-150
Identity = 262/264 (99.24%), Postives = 262/264 (99.24%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCAAA 60
           MASACASSAIAAVAI  SSSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCAAA
Sbjct: 1   MASACASSAIAAVAI--SSSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCAAA 60

Query: 61  DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI 120
           DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI
Sbjct: 61  DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI 120

Query: 121 FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD 180
           FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD
Sbjct: 121 FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD 180

Query: 181 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI 240
           PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI
Sbjct: 181 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI 240

Query: 241 YTGTGPIDNLFAHLADPGHATVFA 265
           YTGTGPIDNLFAHLADPGHATVFA
Sbjct: 241 YTGTGPIDNLFAHLADPGHATVFA 262

[Close]
BLAST of Cmc10g0270171 vs. ExPASy TrEMBL
Match: A0A6J1KAB5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493102 PE=3 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 3.9e-148
Identity = 258/269 (95.91%), Postives = 262/269 (97.40%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCAAA 60
           MASACASSAIAAVAISSSSS KNGCPK+ SNFL GK+LRLR   AAA VAPRSAPVCAAA
Sbjct: 1   MASACASSAIAAVAISSSSSQKNGCPKV-SNFLTGKRLRLRKYTAAA-VAPRSAPVCAAA 60

Query: 61  DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI 120
           DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGL+SDPESLRWNQQAELVHCRWAMLGAAGI
Sbjct: 61  DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI 120

Query: 121 FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD 180
           FIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD
Sbjct: 121 FIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD 180

Query: 181 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI 240
           PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI
Sbjct: 181 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI 240

Query: 241 YTGTGPIDNLFAHLADPGHATVFAAFTPK 270
           YTGTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 YTGTGPIDNLFAHLADPGHATVFAAFTPK 267

[Close]
BLAST of Cmc10g0270171 vs. ExPASy TrEMBL
Match: A0A6J1H0H5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458830 PE=3 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 3.9e-148
Identity = 258/269 (95.91%), Postives = 262/269 (97.40%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCAAA 60
           MASACASSAIAAVAISSSSS KNGCPK+ SNFL GK+LRLR   AAA VAPRSAPVCAAA
Sbjct: 1   MASACASSAIAAVAISSSSSQKNGCPKV-SNFLTGKRLRLRKYTAAA-VAPRSAPVCAAA 60

Query: 61  DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI 120
           DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGL+SDPESLRWNQQAELVHCRWAMLGAAGI
Sbjct: 61  DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGI 120

Query: 121 FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD 180
           FIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD
Sbjct: 121 FIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD 180

Query: 181 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI 240
           PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI
Sbjct: 181 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI 240

Query: 241 YTGTGPIDNLFAHLADPGHATVFAAFTPK 270
           YTGTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 YTGTGPIDNLFAHLADPGHATVFAAFTPK 267

[Close]
BLAST of Cmc10g0270171 vs. TAIR 10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2 )

HSP 1 Score: 451.4 bits (1160), Expect = 4.9e-127
Identity = 214/269 (79.55%), Postives = 233/269 (86.62%), Query Frame = 0 

Query: 2   ASACASSAIAAVAISSSSSSKNGCPKLASNFLAGKKLRL-RNLNAAAVVAPRSAPVCAAA 61
           +S CASSAIAA++              + +FL GKKLRL + L   AV  P ++    AA
Sbjct: 3   SSLCASSAIAAIS--------------SPSFLGGKKLRLKKKLTVPAVSRPDASVRAVAA 62

Query: 62  DPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGI 121
           DPDRP+WFPGSTPP WLDGSLPGDFGFDPLGL+SDP+SL+WN QAE+VHCRWAMLGAAGI
Sbjct: 63  DPDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGI 122

Query: 122 FIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTD 181
           FIPEFLTKIGILNTPSWY+AGE EYFTD TTLF+VELI IGWAEGRRWADI+KPG VNTD
Sbjct: 123 FIPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTD 182

Query: 182 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHI 241
           P+FPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQHI
Sbjct: 183 PVFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHI 242

Query: 242 YTGTGPIDNLFAHLADPGHATVFAAFTPK 270
           YTGTGPIDNLFAHLADPGHAT+FAAFTPK
Sbjct: 243 YTGTGPIDNLFAHLADPGHATIFAAFTPK 257

[Close]
BLAST of Cmc10g0270171 vs. TAIR 10
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6 )

HSP 1 Score: 307.4 bits (786), Expect = 1.2e-83
Identity = 149/269 (55.39%), Postives = 184/269 (68.40%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSS--SSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCA 60
           MA A AS+  + + +S+S   +     P +AS    G +L +R            + VC 
Sbjct: 1   MAFAIASALTSTLTLSTSRVQNPTQRRPHVASTSSTGGRL-MRERLVVVRAGKEVSSVCE 60

Query: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120
              PDRPLWFPGS+PP WLDGSLPGDFGFDPLGL SDP++L+W  QAEL+H RWAML   
Sbjct: 61  PLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVT 120

Query: 121 GIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180
           GI IPE L ++G +   SWY AG  EYF D+TTLF+ +++ +GWAEGRRWAD++KPG V+
Sbjct: 121 GIIIPECLERLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPGSVD 180

Query: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240
            +P +P+      DVGYPGGLWFD + WG GSPE +  LRTKEIKNGRLAMLA +G  FQ
Sbjct: 181 IEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQ 240

Query: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFT 268
             YT   PI+NL AHLADPGH  VF+AFT
Sbjct: 241 ATYTSQDPIENLMAHLADPGHCNVFSAFT 268

[Close]
BLAST of Cmc10g0270171 vs. TAIR 10
Match: AT3G47470.1 (light-harvesting chlorophyll-protein complex I subunit A4 )

HSP 1 Score: 221.9 bits (564), Expect = 6.4e-58
Identity = 117/257 (45.53%), Postives = 150/257 (58.37%), Query Frame = 0 

Query: 10  IAAVAISSSSSSKNGCPKLASNFLAGKKLRLRNLNAAAVVAPRSAPVCAAADPDRPLWFP 69
           +A V   +S+S    C      FL G   RL    +   +   +       +  +  W P
Sbjct: 1   MATVTTHASASIFRPCTS-KPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLP 60

Query: 70  GSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKI 129
           G   P +L GSL GD GFDPLGLA DPE+L+W  QAELV+ RWAMLG AG+ +PE  TKI
Sbjct: 61  GLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKI 120

Query: 130 GILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLT 189
           GI+N P WY AG+ +YF  ++TLF++E I   + E RRW DI  PG VN DPIF    L 
Sbjct: 121 GIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 180

Query: 190 GTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDN 249
             +VGYPGG+ F+PL +        +E + KE+ NGRLAMLA +G   QH  TG GP +N
Sbjct: 181 KGEVGYPGGI-FNPLNFA-----PTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFEN 240

Query: 250 LFAHLADPGHATVFAAF 267
           L  HL+DP H T+   F
Sbjct: 241 LLQHLSDPWHNTIVQTF 250

[Close]
BLAST of Cmc10g0270171 vs. TAIR 10
Match: AT5G28450.1 (Chlorophyll A-B binding family protein )

HSP 1 Score: 214.9 bits (546), Expect = 7.8e-56
Identity = 95/103 (92.23%), Postives = 99/103 (96.12%), Query Frame = 0 

Query: 167 RWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGR 226
           R  DI+KPG VNTDP+FPNNKLTGTD+GYPGGLWFDPLGWGSGSP KIKELRTKEIKNGR
Sbjct: 71  RAPDIIKPGSVNTDPVFPNNKLTGTDIGYPGGLWFDPLGWGSGSPTKIKELRTKEIKNGR 130

Query: 227 LAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK 270
           LAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FAAFTPK
Sbjct: 131 LAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 173

[Close]
BLAST of Cmc10g0270171 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 200.7 bits (509), Expect = 1.5e-51
Identity = 104/230 (45.22%), Postives = 140/230 (60.87%), Query Frame = 0 

Query: 44  NAAAVVAPRSAPVCAAAD-------PDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDP 103
           +A++V+  R + V AA          +R  W PG  PPP+LDG+L GD+GFDPLGL  DP
Sbjct: 19  DASSVITRRISSVKAAGGGINPTVAVERATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDP 78

Query: 104 ESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYSAGELEY-FTDTTTLFIV 163
           ESL+W  QAELVH R+AMLG AGI   + L   GI N P WY AG +++ F  T TL +V
Sbjct: 79  ESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVV 138

Query: 164 ELIFIGWAEGRRWADILKPGCVNTDPIF---PNNKLTGTDVGYPGGLWFDPLGWGSGSPE 223
           + + +G+AE +R+ D + PG    +  F       L G + GYPGG   +PLG      +
Sbjct: 139 QFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAK-DVQ 198

Query: 224 KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATV 263
              + + KEIKNGRLAM+A++G + Q   T TGPIDNL  HL++P H T+
Sbjct: 199 NAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTI 247

The following BLAST results are available for this feature:
BLAST of Cmc10g0270171 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008446036.11.1e-155100.00PREDICTED: chlorophyll a-b binding protein 7, chloroplastic [Cucumis melo][more]
XP_004135326.11.4e-15297.79chlorophyll a-b binding protein 7, chloroplastic [Cucumis sativus] >KGN51671.1 h... [more]
TYK15728.12.3e-15099.24chlorophyll a-b binding protein 7 [Cucumis melo var. makuwa][more]
XP_038892923.16.6e-15097.01chlorophyll a-b binding protein 7, chloroplastic [Benincasa hispida][more]
XP_022957420.18.1e-14895.91chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata] >XP_022998... [more]
BLAST of Cmc10g0270171 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P107089.1e-13484.50Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081... [more]
P138691.2e-13083.46Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 S... [more]
Q9SYW87.0e-12679.55Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis th... [more]
Q8LCQ41.6e-8255.39Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis th... [more]
Q9SQL26.2e-5848.21Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lh... [more]
BLAST of Cmc10g0270171 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BDM55.1e-156100.00Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103... [more]
A0A0A0KV986.9e-15397.79Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa... [more]
A0A5D3CWU81.1e-15099.24Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11... [more]
A0A6J1KAB53.9e-14895.91Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1H0H53.9e-14895.91Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=... [more]
BLAST of Cmc10g0270171 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G61470.14.9e-12779.55photosystem I light harvesting complex gene 2 [more]
AT1G19150.11.2e-8355.39photosystem I light harvesting complex gene 6 [more]
AT3G47470.16.4e-5845.53light-harvesting chlorophyll-protein complex I subunit A4 [more]
AT5G28450.17.8e-5692.23Chlorophyll A-B binding family protein [more]
AT1G45474.11.5e-5145.22photosystem I light harvesting complex gene 5 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 74..259
e-value: 4.2E-77
score: 260.3
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 73..239
e-value: 1.2E-53
score: 181.9
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 1..269
NoneNo IPR availablePANTHERPTHR21649:SF116CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 1..269
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 60..267

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0270171.1Cmc10g0270171.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009768 photosynthesis, light harvesting in photosystem I
biological_process GO:0009416 response to light stimulus
biological_process GO:0009765 photosynthesis, light harvesting
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009522 photosystem I
cellular_component GO:0009523 photosystem II
cellular_component GO:0016020 membrane
molecular_function GO:0016168 chlorophyll binding