Cmc10g0270061 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0270061
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Microsomal signal peptidase 12 kDa subunit (SPC12)
Location	CMiso1.1chr10: 4375710 .. 4378607 (-)
RNA-Seq Expression	Cmc10g0270061
Synteny	Cmc10g0270061

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGGGATTCATCGGACGGCTGAGATTTTATGTGCGAATTCTTCCAAATCAGGACCGGTGAATACATACCGCTCCCCGCTCTTCTTCTGATTCTCGAAAGCAATTGACCAAATCCTCTTTTCTTCCCGCCGATCATTCCCGTCTGGACTGCACATCGCCGTCTCCGAATTCCTCAAAGGTTACTGCTCTCCCTCTCTCAATTTTCGAATTCCTTCCTGCTTCATTTGTTTAATTCTAAATCCTTGTTCATAGCGCTTAGGATTTTCCGTTTCTCCAGGTGTAGGTAGGGATCTTCATTATAGTTAAATCTTTCTATTGAGTTTTGACTATTGTTTCTTCATTCACGTTCTATGCCACCTTCTGGGTCGGATCTGACGATTATCTCCTTATTTTTCCATGTTTTAGATGGACTGGCAAGGGCAAAAGCTAGCGGAGCAGTTGATGCAGATTATGTTGGTTGCATTTGCCGTGGTTGCCTTTTTGACTGGCTATGTTATGGGATCATTTAGGATGATGATCTTGGTTTACGCTGGCGGTGTGTTTCTCACCACATTAATCACTGTTCCGAATTGGCCTTTCTTCAATCGCCACCCGCTCAAGTGGTTGGATCCTAGTTTGGCTGAAAAATACCCTAAGCCGCAACCGCAGGAGCCTGTGGTTTCGAAGAAGAAACCTGCTAAGAAGTAGGTCAGTTTGATTGCTGTTGTTCTTGTATTAACATACACTTTGAACCTTGAATTTTCTAATGTCCCCAAAATGATGATACATACACTCGTTCTATGGATTATAATTTTGAAGGTTTAGAGAATGACAGATCTCTTTAAAAGAGAACCCTTGTGTTTTTTCTGTTCTATGGTTATAATAGATTAGATCATACATGTCTATCTAGTCATAATTATAAGCTATTGCTTCTTTGCTGTTTTTCCTTGGTTATTATAACATACATTTGAAGAACATTTTGAAACTAAACTGAATTAAGTCATACAGACGATGAGTTTTGCTTGTACGGATTGTCATCGGCACACCATAATATTCAAGGGCATTGCAATTTACATCATTGGTGCATTATATGCTATTTCTATGATGTTTTGCTTGTATGTACAATATGGTAAATGGTGCAATATAGCTTGGCTCTGAAGTCACACTATTGTGTAATTGGGATTATTGCACTCTTTTAGTTGCTGTGAAGTCGCACCATATTGCATAATATTCAAAGGCATTCTGCAATATGATTTGTGTGAACTGTGAGTTCTTTGGTTTTATCTGGTGAATAACTCCACGGGATGGAATCGAGGCTGGAAGTCTTTGGATTCAATCAGGAGATCATGTTTTCATCTCACTTAAACTACATAATTAGAGTAGTGAAGTCTCGTTGGATAACCATTTGATCTTTTAAAATTGAGCTTATAAACACTGCTTTCACACATTAGTTTCTATGATTTGTTATTGACCCTCGACCTATGTCTTAAGAAACCAAACCAAGTTTTGAAAACTATAATTGTTTAGCAATTCAACTATTTCTTTGATAAGTTAGCATCGGGATAAAAAAGGAGACGTATTCTTAATAACTAAGTTAGAGGTTATGGGTTTAATTCATGGTAGCCACCTATCTATAAATTAATTTTCTATGAGTTTTTTTGACACCCAAATGTTGTCTTATGAGATTAGTTCTACACTAATGGATATAAAAAGAAAAACTTATGTAGTTAAGTTCGATATTTTGGTAGATTAAGCAGGTAATTGTCTCATCATGTTCCAACCATTTATATTTCAAATCCTATTTGTTGAATCGGTACTGAACCTTCATTAAAAATTCTACAACAGTGGGAAGTCTTTTGGTATTCCACGTTCTTACTGGTTTGGATGGTGTTTCTCACTCTGGGATGATAATTTCAAAAGGAAATTAGACAATAGATCCTTCCCTTTTGATTAGTTTCTGCTTACCAATGATTGGAGTTATTCTTCTTATATTATATACATTACAGATATTATATGAAAATCTCTCCTTATAATATAGCATGCCATTCATTCTCCTCGCCATGCTTATCAACTTATTGCTTCTCTCTTTTATTTTTTCTCGTGACATTTGTTTAGTTTTGTTACATGAACTAGATTGAGAATGATCTGTTCTGTTTGGATTCTCTCTTTTTTGTTTGTGAATGCTCACTCCATGTGCCCAATGAAAAATGATGACAATACCTGTGAGTAGAATTCATCCATAGTTATTTTATTGAGGTGACAGATTATGTGGCTTGGCACCGATCTGAGTAAACTGGAATTTGTAAGCCTTTTATATGTTTCTTTAGGCTTCAGAGTGAAAGCTGTTTTTTCTGTTGTGTAAGGTTGGATTTGGTTTATTTGTCTTAGCGTGAGATTAGAGACTAGAGTCTTATGCCAAAAACTCCCCAGCTGCAGAACCGAACCGAAGCGATTATTTCTAGAGGAATGGAAGATAATAATCCAGTGTATAATAAAATTATAAATATCACAATATTTATAATTACAGTTTTTTTCAATGTTTTTATATATGATTATATTTTGATTATGGTTTCTATATTTACAAACATCTAAAAACTGTGGGTTCGGTGAAGAATGTTCAAACCAAATTCGTATTTAGATATTTGTGGGTTCATTACATGACTGATCTCTTAGTCACTAACATATGTTGCACGAGCTAAGCCGTGGTTCAATCTAACAAGCAACTACCTTAGGGATGTCCAAATACTCAAAATGACTTTTTCGATCAACCTTTTGAGTGTTTATAAATATTTTTTTTTGTAATTATAAAACTATTGATAATAATTTCAAGTCTAACTTTTAACTCATTTTATTGTTAATAAAGAAGGTAAAAATACTATTGATCTTAAATTAAATTTTAGTTTGTAATTATTGAGCTCT

mRNA sequence

GTGGGGATTCATCGGACGGCTGAGATTTTATGTGCGAATTCTTCCAAATCAGGACCGGTGAATACATACCGCTCCCCGCTCTTCTTCTGATTCTCGAAAGCAATTGACCAAATCCTCTTTTCTTCCCGCCGATCATTCCCGTCTGGACTGCACATCGCCGTCTCCGAATTCCTCAAAGATGGACTGGCAAGGGCAAAAGCTAGCGGAGCAGTTGATGCAGATTATGTTGGTTGCATTTGCCGTGGTTGCCTTTTTGACTGGCTATGTTATGGGATCATTTAGGATGATGATCTTGGTTTACGCTGGCGGTGTGTTTCTCACCACATTAATCACTGTTCCGAATTGGCCTTTCTTCAATCGCCACCCGCTCAAGTGGTTGGATCCTAGTTTGGCTGAAAAATACCCTAAGCCGCAACCGCAGGAGCCTGTGGTTTCGAAGAAGAAACCTGCTAAGAACGTGAGATTAGAGACTAGAGTCTTATGCCAAAAACTCCCCAGCTGCAGAACCGAACCGAAGCGATTATTTCTAGAGGAATGGAAGATAATAATCCAGTGTATAATAAAATTATAAATATCACAATATTTATAATTACAGTTTTTTTCAATGTTTTTATATATGATTATATTTTGATTATGGTTTCTATATTTACAAACATCTAAAAACTGTGGGTTCGGTGAAGAATGTTCAAACCAAATTCGTATTTAGATATTTGTGGGTTCATTACATGACTGATCTCTTAGTCACTAACATATGTTGCACGAGCTAAGCCGTGGTTCAATCTAACAAGCAACTACCTTAGGGATGTCCAAATACTCAAAATGACTTTTTCGATCAACCTTTTGAGTGTTTATAAATATTTTTTTTTGTAATTATAAAACTATTGATAATAATTTCAAGTCTAACTTTTAACTCATTTTATTGTTAATAAAGAAGGTAAAAATACTATTGATCTTAAATTAAATTTTAGTTTGTAATTATTGAGCTCT

Coding sequence (CDS)

ATGCAGATTATGTTGGTTGCATTTGCCGTGGTTGCCTTTTTGACTGGCTATGTTATGGGATCATTTAGGATGATGATCTTGGTTTACGCTGGCGGTGTGTTTCTCACCACATTAATCACTGTTCCGAATTGGCCTTTCTTCAATCGCCACCCGCTCAAGTGGTTGGATCCTAGTTTGGCTGAAAAATACCCTAAGCCGCAACCGCAGGAGCCTGTGGTTTCGAAGAAGAAACCTGCTAAGAACGTGAGATTAGAGACTAGAGTCTTATGCCAAAAACTCCCCAGCTGCAGAACCGAACCGAAGCGATTATTTCTAGAGGAATGGAAGATAATAATCCAGTGTATAATAAAATTATAA

Protein sequence

MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKNVRLETRVLCQKLPSCRTEPKRLFLEEWKIIIQCIIKL

Homology

[Close]

BLAST of Cmc10g0270061 vs. NCBI nr
Match: XP_008446045.1 (PREDICTED: probable signal peptidase complex subunit 1 [Cucumis melo] >XP_008446046.1 PREDICTED: probable signal peptidase complex subunit 1 [Cucumis melo] >XP_016900289.1 PREDICTED: probable signal peptidase complex subunit 1 [Cucumis melo] >KAA0034201.1 putative signal peptidase complex subunit 1 [Cucumis melo var. makuwa] >TYK15719.1 putative signal peptidase complex subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 158.3 bits (399), Expect = 4.1e-35
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA 60
          MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA
Sbjct: 13 MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA 72

Query: 61 EKYPKPQPQEPVVSKKKPAK 81
          EKYPKPQPQEPVVSKKKPAK
Sbjct: 73 EKYPKPQPQEPVVSKKKPAK 92

[Close]

BLAST of Cmc10g0270061 vs. NCBI nr
Match: XP_004135313.1 (probable signal peptidase complex subunit 1 [Cucumis sativus] >XP_031741214.1 probable signal peptidase complex subunit 1 [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 7.7e-34
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 1  MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA 60
          MQ+MLVAFAVVAFLTGYVMGSFR+MILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA
Sbjct: 13 MQLMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA 72

Query: 61 EKYPKPQPQEPVVSKKKPAK 81
          EKYPKPQPQEPVV KKKPAK
Sbjct: 73 EKYPKPQPQEPVVLKKKPAK 92

[Close]

BLAST of Cmc10g0270061 vs. NCBI nr
Match: KGN51679.1 (hypothetical protein Csa_009252 [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 7.7e-34
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 1   MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA 60
           MQ+MLVAFAVVAFLTGYVMGSFR+MILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA
Sbjct: 123 MQLMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA 182

Query: 61  EKYPKPQPQEPVVSKKKPAK 81
           EKYPKPQPQEPVV KKKPAK
Sbjct: 183 EKYPKPQPQEPVVLKKKPAK 202

[Close]

BLAST of Cmc10g0270061 vs. NCBI nr
Match: XP_038882954.1 (probable signal peptidase complex subunit 1 [Benincasa hispida])

HSP 1 Score: 149.8 bits (377), Expect = 1.4e-32
Identity = 76/80 (95.00%), Postives = 77/80 (96.25%), Query Frame = 0


Query: 1  MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA 60
          MQIMLVAFAVVAFLTGY+MGSFRMMILVYAGGV LTTLITVPNWPFFNRHPLKWLDPSLA
Sbjct: 13 MQIMLVAFAVVAFLTGYIMGSFRMMILVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSLA 72

Query: 61 EKYPKPQPQEPVVSKKKPAK 81
          EKYPKPQPQEPVV KKK AK
Sbjct: 73 EKYPKPQPQEPVVLKKKTAK 92

[Close]

BLAST of Cmc10g0270061 vs. NCBI nr
Match: XP_023549840.1 (probable signal peptidase complex subunit 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 146.4 bits (368), Expect = 1.6e-31
Identity = 74/80 (92.50%), Postives = 76/80 (95.00%), Query Frame = 0


Query: 1  MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA 60
          MQIMLVAFAVVAFLTGYVM SFRMM+LVYAGGV LTTLITVPNWPFFNRHPLKWLDPS+A
Sbjct: 13 MQIMLVAFAVVAFLTGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVA 72

Query: 61 EKYPKPQPQEPVVSKKKPAK 81
          EKYPKPQPQEPVV KKKP K
Sbjct: 73 EKYPKPQPQEPVVLKKKPTK 92

[Close]

BLAST of Cmc10g0270061 vs. ExPASy Swiss-Prot
Match: Q944J0 (Probable signal peptidase complex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=At2g22425 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.9e-20
Identity = 53/80 (66.25%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 1  MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA 60
          MQI+LV   VVA + GY   SFR M+L+YAGGV LTTL+TVPNWPF+N HPLKWLDPS A
Sbjct: 13 MQILLVISGVVAVVVGYTTESFRTMMLIYAGGVVLTTLVTVPNWPFYNLHPLKWLDPSEA 72

Query: 61 EKYPKPQPQEPVVSKKKPAK 81
          EK+PKP+    V SKKK +K
Sbjct: 73 EKHPKPEVVS-VASKKKFSK 91

[Close]

BLAST of Cmc10g0270061 vs. ExPASy Swiss-Prot
Match: Q3T134 (Signal peptidase complex subunit 1 OS=Bos taurus OX=9913 GN=SPCS1 PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.3e-04
Identity = 24/66 (36.36%), Postives = 37/66 (56.06%), Query Frame = 0


Query: 2  QIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWL---DPS 61
          Q +++  A+V F+ GY+   F   + +   G   + L+T+P WP + RHPLKWL   D S
Sbjct: 25 QGIILFSAIVGFIYGYLAEQFGWTVYIVMAGFAFSCLLTLPPWPIYRRHPLKWLPVQDSS 84

Query: 62 LAEKYP 65
            +K P
Sbjct: 85 TEDKKP 90

[Close]

BLAST of Cmc10g0270061 vs. ExPASy Swiss-Prot
Match: Q9D958 (Signal peptidase complex subunit 1 OS=Mus musculus OX=10090 GN=Spcs1 PE=2 SV=3)

HSP 1 Score: 46.2 bits (108), Expect = 3.0e-04
Identity = 21/54 (38.89%), Postives = 32/54 (59.26%), Query Frame = 0


Query: 2   QIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWL 56
           Q +++  A+V F+ GYV   F   + +   G   + L+T+P WP + RHPLKWL
Sbjct: 84  QGIILFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSCLLTLPPWPIYRRHPLKWL 137

[Close]

BLAST of Cmc10g0270061 vs. ExPASy Swiss-Prot
Match: B0FWK4 (Signal peptidase complex subunit 1 OS=Sus scrofa OX=9823 GN=SPCS1 PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.0e-04
Identity = 24/66 (36.36%), Postives = 36/66 (54.55%), Query Frame = 0


Query: 2  QIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWL---DPS 61
          Q +++  A+V F+ GYV   F   + +   G   + L+T+P WP + RHPLKWL   D  
Sbjct: 25 QGIILFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSCLLTLPPWPIYRRHPLKWLPVQDSG 84

Query: 62 LAEKYP 65
            +K P
Sbjct: 85 TEDKKP 90

[Close]

BLAST of Cmc10g0270061 vs. ExPASy TrEMBL
Match: A0A1S3BET6 (probable signal peptidase complex subunit 1 OS=Cucumis melo OX=3656 GN=LOC103488895 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.0e-35
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA 60
          MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA
Sbjct: 13 MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA 72

Query: 61 EKYPKPQPQEPVVSKKKPAK 81
          EKYPKPQPQEPVVSKKKPAK
Sbjct: 73 EKYPKPQPQEPVVSKKKPAK 92

[Close]

BLAST of Cmc10g0270061 vs. ExPASy TrEMBL
Match: A0A5D3CZV6 (Putative signal peptidase complex subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002180 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.0e-35
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA 60
          MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA
Sbjct: 13 MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA 72

Query: 61 EKYPKPQPQEPVVSKKKPAK 81
          EKYPKPQPQEPVVSKKKPAK
Sbjct: 73 EKYPKPQPQEPVVSKKKPAK 92

[Close]

BLAST of Cmc10g0270061 vs. ExPASy TrEMBL
Match: A0A0A0KS09 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589960 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.7e-34
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 1   MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA 60
           MQ+MLVAFAVVAFLTGYVMGSFR+MILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA
Sbjct: 123 MQLMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA 182

Query: 61  EKYPKPQPQEPVVSKKKPAK 81
           EKYPKPQPQEPVV KKKPAK
Sbjct: 183 EKYPKPQPQEPVVLKKKPAK 202

[Close]

BLAST of Cmc10g0270061 vs. ExPASy TrEMBL
Match: A0A6J1KDF1 (probable signal peptidase complex subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111493339 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 8.6e-31
Identity = 73/80 (91.25%), Postives = 75/80 (93.75%), Query Frame = 0


Query: 1  MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA 60
          MQIMLVAFAVVAFLTGYVM SFRMM+LVYA GV LTTLITVPNWPFFNRHPLKWLDPS+A
Sbjct: 13 MQIMLVAFAVVAFLTGYVMESFRMMMLVYACGVVLTTLITVPNWPFFNRHPLKWLDPSVA 72

Query: 61 EKYPKPQPQEPVVSKKKPAK 81
          EKYPKPQPQEPVV KKKP K
Sbjct: 73 EKYPKPQPQEPVVLKKKPTK 92

[Close]

BLAST of Cmc10g0270061 vs. ExPASy TrEMBL
Match: A0A6J1GX63 (probable signal peptidase complex subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111458355 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.1e-30
Identity = 72/80 (90.00%), Postives = 74/80 (92.50%), Query Frame = 0


Query: 1  MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA 60
          MQIMLVAFAVVAFLTGYVM SFRMM+LVYAGGV LTTLITVPNWPFFNRHPLKWLDP +A
Sbjct: 13 MQIMLVAFAVVAFLTGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPIVA 72

Query: 61 EKYPKPQPQEPVVSKKKPAK 81
          EKYPKPQPQEPV  KKKP K
Sbjct: 73 EKYPKPQPQEPVALKKKPTK 92

[Close]

BLAST of Cmc10g0270061 vs. TAIR 10
Match: AT4G40042.1 (Microsomal signal peptidase 12 kDa subunit (SPC12) )

HSP 1 Score: 102.1 bits (253), Expect = 3.2e-22
Identity = 54/81 (66.67%), Postives = 64/81 (79.01%), Query Frame = 0


Query: 1  MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA 60
          MQI+L+  AVV+F+ GY   SFRMM+L+YAGGV LTTLIT+PNWP FNRH LKWLDPS A
Sbjct: 13 MQILLLIAAVVSFVVGYTTASFRMMMLIYAGGVVLTTLITIPNWPCFNRHHLKWLDPSEA 72

Query: 61 EKYPKPQPQEPVVSKKKPAKN 82
          EK+PK  PQ  VVS KK + +
Sbjct: 73 EKHPK--PQVVVVSSKKKSSS 91

[Close]

BLAST of Cmc10g0270061 vs. TAIR 10
Match: AT2G22425.1 (Microsomal signal peptidase 12 kDa subunit (SPC12) )

HSP 1 Score: 99.4 bits (246), Expect = 2.1e-21
Identity = 53/80 (66.25%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 1  MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA 60
          MQI+LV   VVA + GY   SFR M+L+YAGGV LTTL+TVPNWPF+N HPLKWLDPS A
Sbjct: 13 MQILLVISGVVAVVVGYTTESFRTMMLIYAGGVVLTTLVTVPNWPFYNLHPLKWLDPSEA 72

Query: 61 EKYPKPQPQEPVVSKKKPAK 81
          EK+PKP+    V SKKK +K
Sbjct: 73 EKHPKPEVVS-VASKKKFSK 91

[Close]

BLAST of Cmc10g0270061 vs. TAIR 10
Match: AT2G22425.2 (Microsomal signal peptidase 12 kDa subunit (SPC12) )

HSP 1 Score: 99.4 bits (246), Expect = 2.1e-21
Identity = 53/80 (66.25%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 1  MQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLA 60
          MQI+LV   VVA + GY   SFR M+L+YAGGV LTTL+TVPNWPF+N HPLKWLDPS A
Sbjct: 13 MQILLVISGVVAVVVGYTTESFRTMMLIYAGGVVLTTLVTVPNWPFYNLHPLKWLDPSEA 72

Query: 61 EKYPKPQPQEPVVSKKKPAK 81
          EK+PKP+    V SKKK +K
Sbjct: 73 EKHPKPEVVS-VASKKKFSK 91

The following BLAST results are available for this feature:

BLAST of Cmc10g0270061 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446045.1	4.1e-35	100.00	PREDICTED: probable signal peptidase complex subunit 1 [Cucumis melo] >XP_008446...	[more]
XP_004135313.1	7.7e-34	96.25	probable signal peptidase complex subunit 1 [Cucumis sativus] >XP_031741214.1 pr...	[more]
KGN51679.1	7.7e-34	96.25	hypothetical protein Csa_009252 [Cucumis sativus]	[more]
XP_038882954.1	1.4e-32	95.00	probable signal peptidase complex subunit 1 [Benincasa hispida]	[more]
XP_023549840.1	1.6e-31	92.50	probable signal peptidase complex subunit 1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc10g0270061 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q944J0	2.9e-20	66.25	Probable signal peptidase complex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q3T134	2.3e-04	36.36	Signal peptidase complex subunit 1 OS=Bos taurus OX=9913 GN=SPCS1 PE=3 SV=1	[more]
Q9D958	3.0e-04	38.89	Signal peptidase complex subunit 1 OS=Mus musculus OX=10090 GN=Spcs1 PE=2 SV=3	[more]
B0FWK4	3.0e-04	36.36	Signal peptidase complex subunit 1 OS=Sus scrofa OX=9823 GN=SPCS1 PE=3 SV=1	[more]

BLAST of Cmc10g0270061 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BET6	2.0e-35	100.00	probable signal peptidase complex subunit 1 OS=Cucumis melo OX=3656 GN=LOC103488...	[more]
A0A5D3CZV6	2.0e-35	100.00	Putative signal peptidase complex subunit 1 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0KS09	3.7e-34	96.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589960 PE=3 SV=1	[more]
A0A6J1KDF1	8.6e-31	91.25	probable signal peptidase complex subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1GX63	1.1e-30	90.00	probable signal peptidase complex subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Cmc10g0270061 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G40042.1	3.2e-22	66.67	Microsomal signal peptidase 12 kDa subunit (SPC12)	[more]
AT2G22425.1	2.1e-21	66.25	Microsomal signal peptidase 12 kDa subunit (SPC12)	[more]
AT2G22425.2	2.1e-21	66.25	Microsomal signal peptidase 12 kDa subunit (SPC12)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009542	Signal peptidase complex subunit Spc1/SPCS1	PFAM	PF06645	SPC12	coord: 1..58 e-value: 1.6E-22 score: 79.3
IPR009542	Signal peptidase complex subunit Spc1/SPCS1	PANTHER	PTHR13202	MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT	coord: 1..80
None	No IPR available	PANTHER	PTHR13202:SF4	SIGNAL PEPTIDASE COMPLEX SUBUNIT 1-RELATED	coord: 1..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0270061.1	Cmc10g0270061.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045047	protein targeting to ER
biological_process	GO:0006465	signal peptide processing
biological_process	GO:0006412	translation
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005787	signal peptidase complex
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003735	structural constituent of ribosome