Cmc10g0268541 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0268541
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	serine/arginine-rich splicing factor RSZ21
Location	CMiso1.1chr10: 3520177 .. 3524487 (+)
RNA-Seq Expression	Cmc10g0268541
Synteny	Cmc10g0268541

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGTCACCTTCTGCAGACTTCCGAGCATCGGAGCTCTGCGACTACGGACGGACAGTGTCGTTTTCATTTCTTATCACCGGCTGATCTCTTACAACTCTTTGTCGATTCCGCGAGATCTTTGTCTTGGTAAGCTTCAGCTTCGCGATCAACATGAGCATAACCCTAATTCTCTCTCTCTCTCTCTCTCTCTTTTTTCATTTTTTTTTTCAACGATGAATCCTTGAACCAGCCCTTCGATTTTGTTGTTTCTTCTTCCATTTGTTATCATCTCTTGGAAATACTTCGTATGTGGACTTTTTTTTGTGTGTACTTTTACCACGTGTAGACTTATTTGTTGTTGTAGCAGCTTTCGCATCCTGGGGTTGGGTGGGTTGTGTTGTGTTGTGTTATTCCCATCCCAAGTTTTTTTTTTTAGATTAAACTCTAACTCCTCTCCGTCTCCATTGTTTTTTTGTTTATTTATTGGGATGATTTGTTTTCTCAAACTAGCATCTCATTGTTTATCAGGCGGTTCTTCGCTCATTCGTTACAATGACTAGAGTTTATATTGGTAATCTGGATCCACGCGTTACAGAGAGGGATCTCGAAGATGAATTTCGAATGTTCGGTGTTCTTAGGAGGTGATTTCTGTTTGAAAATTTTTGTATCGAGGCATTCTTTACATGTATTTCTTAAATTAGCATCTTTTAGACGCATGTGCAATTTTTAGTTCTTGGATTCCTTCAATCGGCAGTCTGTTGGGAATCCTGGGATTTATATATTATGCGTTTTCTTTCTCTTTCGCTAAATATTTTGATATTATCTTCAAGGGTTCTTTCAGTATTAGGCTTACATTTTTTGCGCCAGTTTACTATCTATTCATGATGTTTTACCTCGCCAAACATAGACATTTCAGCACTCTGTAGGGTAAGAGAAACAGAAAAGAAAAAGCGTTATTTGGTCTCTTTGAATGTCAGTACGTCTGTTTTAGTACGGATACCATAAAAAGTCTTGTTGGTTTCTGCCCGTTAGCAATAGGAGCTCTCTAATTGGACGCTGGTTTATACATATAAGATCAAAATCTTCCTTATCGTTAGTCATTTGTTGAAGAACTGGATGCAGACACTCTGAGATATGTGCTCTGAAGTTTGCTGATGGCTATCCTTGCGATCTGTTGTCAAGATTTTGCTGCAAGGATATTTACACCTTACCTTAATTGCATATAAATTATTAAAATGAGATAGTTTACAACGTGTATTGCTATAATTTGATATGATAGTTTTGTTTCCTCGTTCCTTTGTATTATAATGCATACTGAAGTGTTTTTTTTTGAATAAAATATAGTGTTTGGGTTGCTAGAAGGCCTCCAGGATATGCGTTTATTGAGTTTGATGATCGCAGGGATGCTCTAGATGCAATACAAGCTTTGGATGGTCAGTTTTAAATAAGTGATTTTTGTAATCCTTTTCCTTTTTCCTTGTATATATCAAATTGTGCATTTCGATTTTCATTCCTACTATCAAGTGATGTTTTCTTCTGTATTTATATGCTGTATCCGCTTGTGCCTGCTTTTTCTCAATTACTAGTGAAAATATGATCGATCAACTATCAGCAGGGGTTTTTCTTTAGCTTTCATTCATCTAGTTCTCATTACTGCAGTGAATTAGAAATCTATTAATATTATTGATCTAGTCTAGTAGCAACTTTTATCCACAAAAATGGACTACATCACGGAAATTTTGTAGATTCTTTTAATGTTACTTTATCCTTAGAAAGCACCTTATTGAAAAAGAGTGTAATAAATGGGCCTAGCTCTCCAATATGCTTCAAAAATGTGATTTTGGGCATTATCATGATTTTAAGATGTAGAAACTCGATGTTATGGAATCCATTCGTCGAAATCATATTTTTAATTTCATTTTTGATATTAAGTCTATCTTGAACCAGCACATAAGTTCTTTGGTGTGGAAGGTTATAGTGCCTAAAAAGGCTAGCAGTTCAGGTCATCATGTGAACTTTATTCAACAATGGGTGAAATACCTGCAATAAACTTTGAAAGTGCTCCCTGAATGCTAGCCCTAACTCGTGCAAGCATGATGAAGTGAATGAATTTAATCTCTACTTCCATACTTTCAGTTTCATTTTCTAAATTTTTTTTTTTGGGTATGTTGTGCTCTATTTTTGGTATCTCTTTGCTTCAACAAGTGTCGCAAGTTGGAAGTCTAGTCTTTCAAACTCCTTGGTTGTCATCCTTTCAAAGGTGCAATATTGCCATGTTATGAAGCGTAGTTCAAAAATGAGAGAAGTCAAATGAGTTTTCAAGATGCTTTCTCCTCTACAGTGTGGAGGTCTTGTCGAGCCTGGTTAAACTTCTCTTCTATCTTATCTTGTATTTCTGATTTTTCTTTGGGCTTCTTTTTTAGGAAAAAATGGTTGGCGTGTGGAGCTTTCTCACAACTCTAAAGGTGGGGGAGGAGGTGGTGGTCGTCGTGGCCGTGGTGCTGGCGGTGGTGGTGGTGGTGGTGATGATTTGAAATGTTATGAATGTGGTGAGCCTGGACATTTTGCTCGTGAATGCCGTTCACGTGGGGGCTCACGAGGTGTAGGAGGTGGTCTGCGTCGTAGTCCTTCTCCTCGGCGTCGTCGGAGTCCAAGCTATGAAAGATATGGCCGCAGGTGTGTTAAAGTTGTTTGTGTTTTTTATACACGCCAATTTTATCTAAGTGATGTCTAATCAACAGGTGGTTTAGTCTTATATATAGTTTAGGTCTTGATGTTCTATCACTTCGTTCCTTTTCTTGTGTAGGAGTAACAGTCCTCGTGGTAAAAGATCCCCACGACGTCGCAGCATTACACCTCCTAAGCGCGGTCGTAGCTACAGCAGATCTCCTCCATACCGTCATGCTCGTCGTGCTTCGCCTTATGCTAATGGGTATGCCTTACTTCCAAGTCATGAGAATTATTCACAAAAACTGTTTAGTTACTGAGAGGAGAGAGTAATTGGCTTAGATAGGTTGTTTTGTGCACATGGGTGATGGGCCTTGGGTAATCATTGGGAATTAGTGCTGTGGAATAAGGCTACTTGGACGGCACTGACAATAAGGCATTCCAGGCCATCACTGATCTCTCCCTTAACTAATAAGGCATTCTTAACCGTTTTACCCTCCTGGCATGTGTTTTCATTACAAGGCCTATAACATTTCTACAAATTGAGCAGCGAATGATTCTCTACCACAAATGTACATACTTGATTGAGCAATAAATTCCAAACTTCTGTTATTTTTCAATCTGAGAGTTGTATGTTAATCATTATTGCAGAGATTGATGCTGGAAACAAGGCTGGATGTTGTGCTGGTAGAACTTAGATGATGGTGTTTCTGCTATACTGTAGTTCTAATAGGGAATTGTGGAGTGAACCGGAATCATGTAGTTAAGTTCGTCTGACAATTGGTTCTCTTTGAAACCTGGATTTGGATGGGTGTCTACGAAGTGTTTTAAGCCATGAAATGGGTTTCTGTCTGGCACCATTTTGTGTTGGCTCTCTTCCGCCCCGCTGAAACTCGGAGGTTTCTTTCTTGCTTTCAAAATTATATCTACTACCTAGAGTTCTTATATTATATATACCTTTCTATCTATTTATCAATATTTCTTTTTCATTGGACGATCCTAAAGATTTATCTGTTGGCTGTTTTTTTTTTCTTTCATGTTCTTTTGAGGTGTGATTTTCGGCTAATATGGCATCTTAGTGCTTCACTTCGGTTCTCAATATCTGCTCTGCTCCTCAATCATCTTCTTGTTTCTACAACTGGTTGCATGCTGTTTGTATTGCACTCTTCTGCAAGAAGGCTGCCTATATTGTTAAATCCTCTTTTTAGGTGGTTGAAGAAGATGAAGCTGTTTTTATGCGATTTTCTGCTCATCATCTTCTCGCCTATCACCGTGTTTTTACGAGCTTCTTCTATTACATTGCCCGAAACTATCGTGAGAGATTCTACTCATTTTATATCTCCGGCATCTTGTGAGCTTCACAACTTGTTTATTGCTCTCCCCCAACTCTTCTGCCCTGCTCCACCAACCTACCTTCCATTATAGTTATGCTTCCTTCAATCACACTTACTCCTTAAGTTAGACCACCGCCACTGTTGTCTTCTTCTCATTAGTTCGTGGTGGCTGTTGGTAATTTGAATGCTTATTTATATTCTCTGATTGTTTCTTGTTTGTTCTTTGCATAGAGAAATATACATTTGTGACCCCATTTTTAATTTGAGATTCCTCATTAATTGATTTTAATTGTGAGGTGATCTTTAACGGACTATTCTCAAATTATATAGT

mRNA sequence

CTGTCACCTTCTGCAGACTTCCGAGCATCGGAGCTCTGCGACTACGGACGGACAGTGTCGTTTTCATTTCTTATCACCGGCTGATCTCTTACAACTCTTTGTCGATTCCGCGAGATCTTTGTCTTGGCGGTTCTTCGCTCATTCGTTACAATGACTAGAGTTTATATTGGTAATCTGGATCCACGCGTTACAGAGAGGGATCTCGAAGATGAATTTCGAATGTTCGGTGTTCTTAGGAGTGTTTGGGTTGCTAGAAGGCCTCCAGGATATGCGTTTATTGAGTTTGATGATCGCAGGGATGCTCTAGATGCAATACAAGCTTTGGATGGAAAAAATGGTTGGCGTGTGGAGCTTTCTCACAACTCTAAAGGTGGGGGAGGAGGTGGTGGTCGTCGTGGCCGTGGTGCTGGCGGTGGTGGTGGTGGTGGTGATGATTTGAAATGTTATGAATGTGGTGAGCCTGGACATTTTGCTCGTGAATGCCGTTCACGTGGGGGCTCACGAGGTGTAGGAGGTGGTCTGCGTCGTAGTCCTTCTCCTCGGCGTCGTCGGAGTCCAAGCTATGAAAGATATGGCCGCAGGAGTAACAGTCCTCGTGGTAAAAGATCCCCACGACGTCGCAGCATTACACCTCCTAAGCGCGGTCGTAGCTACAGCAGATCTCCTCCATACCGTCATGCTCGTCGTGCTTCGCCTTATGCTAATGGAGATTGATGCTGGAAACAAGGCTGGATGTTGTGCTGGTAGAACTTAGATGATGGTGTTTCTGCTATACTGTAGTTCTAATAGGGAATTGTGGAGTGAACCGGAATCATGTAGTTAAGTTCGTCTGACAATTGGTTCTCTTTGAAACCTGGATTTGGATGGGTGTCTACGAAGTGTTTTAAGCCATGAAATGGGTTTCTGTCTGGCACCATTTTGTGTTGGCTCTCTTCCGCCCCGCTGAAACTCGGAGGTGTGATTTTCGGCTAATATGGCATCTTAGTGCTTCACTTCGGTTCTCAATATCTGCTCTGCTCCTCAATCATCTTCTTGTTTCTACAACTGGTTGCATGCTGTTTGTATTGCACTCTTCTGCAAGAAGGCTGCCTATATTGTTAAATCCTCTTTTTAGGTGGTTGAAGAAGATGAAGCTGTTTTTATGCGATTTTCTGCTCATCATCTTCTCGCCTATCACCGTGTTTTTACGAGCTTCTTCTATTACATTGCCCGAAACTATCGTGAGAGATTCTACTCATTTTATATCTCCGGCATCTTGTGAGCTTCACAACTTGTTTATTGCTCTCCCCCAACTCTTCTGCCCTGCTCCACCAACCTACCTTCCATTATAGTTATGCTTCCTTCAATCACACTTACTCCTTAAGTTAGACCACCGCCACTGTTGTCTTCTTCTCATTAGTTCGTGGTGGCTGTTGGTAATTTGAATGCTTATTTATATTCTCTGATTGTTTCTTGTTTGTTCTTTGCATAGAGAAATATACATTTGTGACCCCATTTTTAATTTGAGATTCCTCATTAATTGATTTTAATTGTGAGGTGATCTTTAACGGACTATTCTCAAATTATATAGT

Coding sequence (CDS)

ATGACTAGAGTTTATATTGGTAATCTGGATCCACGCGTTACAGAGAGGGATCTCGAAGATGAATTTCGAATGTTCGGTGTTCTTAGGAGTGTTTGGGTTGCTAGAAGGCCTCCAGGATATGCGTTTATTGAGTTTGATGATCGCAGGGATGCTCTAGATGCAATACAAGCTTTGGATGGAAAAAATGGTTGGCGTGTGGAGCTTTCTCACAACTCTAAAGGTGGGGGAGGAGGTGGTGGTCGTCGTGGCCGTGGTGCTGGCGGTGGTGGTGGTGGTGGTGATGATTTGAAATGTTATGAATGTGGTGAGCCTGGACATTTTGCTCGTGAATGCCGTTCACGTGGGGGCTCACGAGGTGTAGGAGGTGGTCTGCGTCGTAGTCCTTCTCCTCGGCGTCGTCGGAGTCCAAGCTATGAAAGATATGGCCGCAGGAGTAACAGTCCTCGTGGTAAAAGATCCCCACGACGTCGCAGCATTACACCTCCTAAGCGCGGTCGTAGCTACAGCAGATCTCCTCCATACCGTCATGCTCGTCGTGCTTCGCCTTATGCTAATGGAGATTGA

Protein sequence

MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDGKNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRASPYANGD

Homology

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BLAST of Cmc10g0268541 vs. NCBI nr
Match: XP_008446226.1 (PREDICTED: serine/arginine-rich splicing factor RSZ21 [Cucumis melo] >XP_008446227.1 PREDICTED: serine/arginine-rich splicing factor RSZ21 [Cucumis melo])

HSP 1 Score: 366.3 bits (939), Expect = 1.6e-97
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120
           KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120

Query: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA 180
           GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA
Sbjct: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA 180

Query: 181 SPYANGD 188
           SPYANGD
Sbjct: 181 SPYANGD 187

[Close]

BLAST of Cmc10g0268541 vs. NCBI nr
Match: TYK15593.1 (serine/arginine-rich splicing factor RSZ21 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 364.0 bits (933), Expect = 7.7e-97
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120
           KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120

Query: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA 180
           GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA
Sbjct: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA 180

Query: 181 SPYANG 187
           SPYANG
Sbjct: 181 SPYANG 186

[Close]

BLAST of Cmc10g0268541 vs. NCBI nr
Match: XP_011655636.1 (serine/arginine-rich splicing factor RSZ21 [Cucumis sativus] >KAE8648723.1 hypothetical protein Csa_008378 [Cucumis sativus])

HSP 1 Score: 360.1 bits (923), Expect = 1.1e-95
Identity = 186/188 (98.94%), Postives = 186/188 (98.94%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGR-GAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRG 120
           KNGWRVELSHNSKGGGGGGGRRGR G GGGGGGGDDLKCYECGEPGHFARECRSRGGSRG
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGGDDLKCYECGEPGHFARECRSRGGSRG 120

Query: 121 VGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARR 180
           VGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARR
Sbjct: 121 VGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARR 180

Query: 181 ASPYANGD 188
           ASPYANGD
Sbjct: 181 ASPYANGD 188

[Close]

BLAST of Cmc10g0268541 vs. NCBI nr
Match: XP_023004543.1 (serine/arginine-rich splicing factor RSZ21-like [Cucurbita maxima])

HSP 1 Score: 353.2 bits (905), Expect = 1.4e-93
Identity = 183/188 (97.34%), Postives = 184/188 (97.87%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTER+LEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120
           KNGWRVELSHNSKGGGGGGGRRGRG GGGGGGGDDLKCYECGEPGHFARECRSRGGSRG 
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGA 120

Query: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRS-PRRRSITPPKRGRSYSRSPPYRHARR 180
           GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRS PRRRSITPPKRGRSYSRSPP RHARR
Sbjct: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARR 180

Query: 181 ASPYANGD 188
           ASPYANGD
Sbjct: 181 ASPYANGD 188

[Close]

BLAST of Cmc10g0268541 vs. NCBI nr
Match: KAG7012825.1 (Serine/arginine-rich splicing factor RSZ21A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 352.8 bits (904), Expect = 1.8e-93
Identity = 182/189 (96.30%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRV+ERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSK--GGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSR 120
           KNGWRVELSHNSK  GGGGGGGRRGRG GGGGGGGDDLKCYECGEPGHFARECRSRGGSR
Sbjct: 61  KNGWRVELSHNSKGGGGGGGGGRRGRGGGGGGGGGDDLKCYECGEPGHFARECRSRGGSR 120

Query: 121 GVGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHAR 180
           G+GGGLRRSPSPRRRRSPSYERYGRRSNSP GKRSPRRRSITPPKRGRSYSRSPP RHAR
Sbjct: 121 GIGGGLRRSPSPRRRRSPSYERYGRRSNSPHGKRSPRRRSITPPKRGRSYSRSPPLRHAR 180

Query: 181 RASPYANGD 188
           RASPYANGD
Sbjct: 181 RASPYANGD 189

[Close]

BLAST of Cmc10g0268541 vs. ExPASy Swiss-Prot
Match: O81127 (Serine/arginine-rich splicing factor RSZ21 OS=Arabidopsis thaliana OX=3702 GN=RSZ21 PE=1 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 2.4e-64
Identity = 143/200 (71.50%), Postives = 153/200 (76.50%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVY+GNLDPRVTER+LEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDALDAI ALD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 61  KNGWRVELSHNSKGG-GGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRG 120
           KNGWRVELSH  KGG GGGGGRR        GG +D KCYECGE GHFARECR     RG
Sbjct: 61  KNGWRVELSHKDKGGRGGGGGRR--------GGIEDSKCYECGELGHFARECR-----RG 120

Query: 121 VGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRS-PRRRSITPPKRGRSYSRSPPYRHAR 180
            G   RRSPSPRRRRSP Y  Y RRS SPRG+RS PRRRS+TPP+RGRSYSRSPPYR +R
Sbjct: 121 RGSVRRRSPSPRRRRSPDY-GYARRSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYRGSR 180

Query: 181 ------------RASPYANG 187
                       R SPYANG
Sbjct: 181 RDSPRRRDSPYGRRSPYANG 186

[Close]

BLAST of Cmc10g0268541 vs. ExPASy Swiss-Prot
Match: O81126 (Serine/arginine-rich splicing factor RSZ22 OS=Arabidopsis thaliana OX=3702 GN=RSZ22 PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 8.7e-59
Identity = 138/198 (69.70%), Postives = 152/198 (76.77%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           M+RVY+GNLDPRVTER+LEDEFR FGV+RSVWVARRPPGYAF++F+D RDA DAI+ALDG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60

Query: 61  KNGWRVELSHN--SKGGGGGGGRRGRGAGG-GGGGGDDLKCYECGEPGHFARECRSRGGS 120
           KNGWRVE SHN   +GGGG GG RG G GG GG GG DLKCYECGE GHFARECR+RGG+
Sbjct: 61  KNGWRVEQSHNRGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFARECRNRGGT 120

Query: 121 RGVGGGLRRSPS-----PRRRRSPSYERYGRRSNSPRGKR--SPRRRSIT-PPKRGRSYS 180
                G RRS S     PR RRSPS   YGRRS SPR +    PRRRS + PP RGRSYS
Sbjct: 121 -----GRRRSKSRSRTPPRYRRSPS---YGRRSYSPRARSPPPPRRRSPSPPPARGRSYS 180

Query: 181 RSPPYRHARRASPYANGD 188
           RSPP   AR   PYANG+
Sbjct: 181 RSPPPYRAREEVPYANGN 190

[Close]

BLAST of Cmc10g0268541 vs. ExPASy Swiss-Prot
Match: Q9SJA6 (Serine/arginine-rich splicing factor RSZ22A OS=Arabidopsis thaliana OX=3702 GN=RSZ22A PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 8.7e-59
Identity = 131/192 (68.23%), Postives = 146/192 (76.04%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           M+RVY+GNLDPRVTER+LEDEFR FGV+RSVWVARRPPGYAF++F+D RDA DAI+ +DG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRSFGVIRSVWVARRPPGYAFLDFEDSRDARDAIREVDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120
           KNGWRVE SHN  GGGG GG RG G GG G GG DLKCYECGE GHFARECRSRGGS   
Sbjct: 61  KNGWRVEQSHNRGGGGGRGGGRGGGDGGRGRGGSDLKCYECGESGHFARECRSRGGS--- 120

Query: 121 GGGLRRSPS-----PRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYR 180
            GG RRS S     PR R+SP+Y   GRRS SPR +  P  R  +P  RGR+YSRSPP  
Sbjct: 121 -GGRRRSRSRSRSPPRYRKSPTYG--GRRSYSPRARSPPPPRRRSPSPRGRNYSRSPPPY 180

Query: 181 HARRASPYANGD 188
            AR   PYANG+
Sbjct: 181 RARDEVPYANGN 186

[Close]

BLAST of Cmc10g0268541 vs. ExPASy Swiss-Prot
Match: Q69KL9 (Serine/arginine-rich splicing factor RSZ21A OS=Oryza sativa subsp. japonica OX=39947 GN=RSZ21A PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.8e-54
Identity = 125/190 (65.79%), Postives = 138/190 (72.63%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           M RVY+GNLDPRVT R+LEDEFR+FGVLRSVWVAR+PPG+AFI+FDDRRDA DAI+ +DG
Sbjct: 1   MARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDIDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120
           KNGWRVELS N+  G GG  R          G  + KCYECGE GHFARECR R GS G+
Sbjct: 61  KNGWRVELSRNASSGRGGRDRY---------GSSESKCYECGETGHFARECRLRIGSGGL 120

Query: 121 GGGLRRSPSPRRRRSPSYER---YGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHA 180
           G G RRS S  R RSP Y R   YGRRS SP G RSPRRRS++ P R RSYSRSP Y   
Sbjct: 121 GSGRRRSRSRSRSRSPRYRRSPSYGRRSYSPAG-RSPRRRSVS-PARARSYSRSPQYNRG 179

Query: 181 RRASP-YANG 187
           R  SP Y NG
Sbjct: 181 RDESPAYDNG 179

[Close]

BLAST of Cmc10g0268541 vs. ExPASy Swiss-Prot
Match: Q6K4N0 (Serine/arginine-rich splicing factor RSZ21 OS=Oryza sativa subsp. japonica OX=39947 GN=RSZP21 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.7e-52
Identity = 122/189 (64.55%), Postives = 139/189 (73.54%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           M R+Y+GNLDPRVT  +LEDEFR+FGVLRSVWVAR+PPG+AFI+FDD+RDA DA++ LDG
Sbjct: 1   MARLYVGNLDPRVTSGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120
           KNGWRVELS NS   GG    R R       GG ++KCYECGE GHFARECR R G  G+
Sbjct: 61  KNGWRVELSRNSSSRGG----RDR------HGGSEMKCYECGETGHFARECRLRIGPGGL 120

Query: 121 GGGLRRSPSPRRRRSPSYER---YGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHA 180
           G G RRS S  R RSP Y +   YGRRS SPR  RSPRRRS++ P RGRSYSRSP     
Sbjct: 121 GSGKRRSRSRSRSRSPQYRKSPTYGRRSYSPR-DRSPRRRSVS-PVRGRSYSRSP---RG 174

Query: 181 RRASPYANG 187
           R  SPYA+G
Sbjct: 181 RGGSPYADG 174

[Close]

BLAST of Cmc10g0268541 vs. ExPASy TrEMBL
Match: A0A1S3BEJ4 (serine/arginine-rich splicing factor RSZ21 OS=Cucumis melo OX=3656 GN=LOC103489020 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 7.6e-98
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120
           KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120

Query: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA 180
           GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA
Sbjct: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA 180

Query: 181 SPYANGD 188
           SPYANGD
Sbjct: 181 SPYANGD 187

[Close]

BLAST of Cmc10g0268541 vs. ExPASy TrEMBL
Match: A0A5D3CUM7 (Serine/arginine-rich splicing factor RSZ21 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00890 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 3.7e-97
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120
           KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120

Query: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA 180
           GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA
Sbjct: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA 180

Query: 181 SPYANG 187
           SPYANG
Sbjct: 181 SPYANG 186

[Close]

BLAST of Cmc10g0268541 vs. ExPASy TrEMBL
Match: A0A6J1KZV2 (serine/arginine-rich splicing factor RSZ21-like OS=Cucurbita maxima OX=3661 GN=LOC111497790 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 6.6e-94
Identity = 183/188 (97.34%), Postives = 184/188 (97.87%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTER+LEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120
           KNGWRVELSHNSKGGGGGGGRRGRG GGGGGGGDDLKCYECGEPGHFARECRSRGGSRG 
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGA 120

Query: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRS-PRRRSITPPKRGRSYSRSPPYRHARR 180
           GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRS PRRRSITPPKRGRSYSRSPP RHARR
Sbjct: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARR 180

Query: 181 ASPYANGD 188
           ASPYANGD
Sbjct: 181 ASPYANGD 188

[Close]

BLAST of Cmc10g0268541 vs. ExPASy TrEMBL
Match: A0A6J1GX57 (serine/arginine-rich splicing factor RSZ21-like OS=Cucurbita moschata OX=3662 GN=LOC111458322 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.7e-92
Identity = 182/188 (96.81%), Postives = 183/188 (97.34%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTER+LEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120
           KNGWRVELSHNSKGGGGGGGRRGR  GGGGGGGDDLKCYECGEPGHFARECRSRGGSRG 
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGR--GGGGGGGDDLKCYECGEPGHFARECRSRGGSRGA 120

Query: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRS-PRRRSITPPKRGRSYSRSPPYRHARR 180
           GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRS PRRRSITPPKRGRSYSRSPP RHARR
Sbjct: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARR 180

Query: 181 ASPYANGD 188
           ASPYANGD
Sbjct: 181 ASPYANGD 186

[Close]

BLAST of Cmc10g0268541 vs. ExPASy TrEMBL
Match: A0A6J1G1N9 (serine/arginine-rich splicing factor RSZ21-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449845 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.1e-91
Identity = 178/187 (95.19%), Postives = 180/187 (96.26%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRV+ERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120
           KNGWRVELSHNSKGGGGGGG R    GGGGGGGDDLKCYECGEPGHFARECRSRGGSRG+
Sbjct: 61  KNGWRVELSHNSKGGGGGGGGRCGRGGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGI 120

Query: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYRHARRA 180
           GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPP RHAR A
Sbjct: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPLRHARHA 180

Query: 181 SPYANGD 188
           SPYANGD
Sbjct: 181 SPYANGD 187

[Close]

BLAST of Cmc10g0268541 vs. TAIR 10
Match: AT1G23860.1 (RS-containing zinc finger protein 21 )

HSP 1 Score: 246.5 bits (628), Expect = 1.7e-65
Identity = 143/200 (71.50%), Postives = 153/200 (76.50%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVY+GNLDPRVTER+LEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDALDAI ALD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 61  KNGWRVELSHNSKGG-GGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRG 120
           KNGWRVELSH  KGG GGGGGRR        GG +D KCYECGE GHFARECR     RG
Sbjct: 61  KNGWRVELSHKDKGGRGGGGGRR--------GGIEDSKCYECGELGHFARECR-----RG 120

Query: 121 VGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRS-PRRRSITPPKRGRSYSRSPPYRHAR 180
            G   RRSPSPRRRRSP Y  Y RRS SPRG+RS PRRRS+TPP+RGRSYSRSPPYR +R
Sbjct: 121 RGSVRRRSPSPRRRRSPDY-GYARRSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYRGSR 180

Query: 181 ------------RASPYANG 187
                       R SPYANG
Sbjct: 181 RDSPRRRDSPYGRRSPYANG 186

[Close]

BLAST of Cmc10g0268541 vs. TAIR 10
Match: AT1G23860.2 (RS-containing zinc finger protein 21 )

HSP 1 Score: 246.5 bits (628), Expect = 1.7e-65
Identity = 143/200 (71.50%), Postives = 153/200 (76.50%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVY+GNLDPRVTER+LEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDALDAI ALD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 61  KNGWRVELSHNSKGG-GGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRG 120
           KNGWRVELSH  KGG GGGGGRR        GG +D KCYECGE GHFARECR     RG
Sbjct: 61  KNGWRVELSHKDKGGRGGGGGRR--------GGIEDSKCYECGELGHFARECR-----RG 120

Query: 121 VGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRS-PRRRSITPPKRGRSYSRSPPYRHAR 180
            G   RRSPSPRRRRSP Y  Y RRS SPRG+RS PRRRS+TPP+RGRSYSRSPPYR +R
Sbjct: 121 RGSVRRRSPSPRRRRSPDY-GYARRSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYRGSR 180

Query: 181 ------------RASPYANG 187
                       R SPYANG
Sbjct: 181 RDSPRRRDSPYGRRSPYANG 186

[Close]

BLAST of Cmc10g0268541 vs. TAIR 10
Match: AT1G23860.4 (RS-containing zinc finger protein 21 )

HSP 1 Score: 239.6 bits (610), Expect = 2.1e-63
Identity = 140/200 (70.00%), Postives = 150/200 (75.00%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVY+GNLDPRVTER+LEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDALDAI ALD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 61  KNGWRVELSHNSKGG-GGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRG 120
           KNGWRVELSH  KGG GGGGGRR        GG +D KCYECGE GHFARECR     RG
Sbjct: 61  KNGWRVELSHKDKGGRGGGGGRR--------GGIEDSKCYECGELGHFARECR-----RG 120

Query: 121 VGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRS-PRRRSITPPKRGRSYSRSPPYRHAR 180
            G   RRSPSPRRRRSP Y      S SPRG+RS PRRRS+TPP+RGRSYSRSPPYR +R
Sbjct: 121 RGSVRRRSPSPRRRRSPDY-----GSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYRGSR 180

Query: 181 ------------RASPYANG 187
                       R SPYANG
Sbjct: 181 RDSPRRRDSPYGRRSPYANG 182

[Close]

BLAST of Cmc10g0268541 vs. TAIR 10
Match: AT2G24590.1 (RNA recognition motif and CCHC-type zinc finger domains containing protein )

HSP 1 Score: 228.0 bits (580), Expect = 6.2e-60
Identity = 131/192 (68.23%), Postives = 146/192 (76.04%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           M+RVY+GNLDPRVTER+LEDEFR FGV+RSVWVARRPPGYAF++F+D RDA DAI+ +DG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRSFGVIRSVWVARRPPGYAFLDFEDSRDARDAIREVDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120
           KNGWRVE SHN  GGGG GG RG G GG G GG DLKCYECGE GHFARECRSRGGS   
Sbjct: 61  KNGWRVEQSHNRGGGGGRGGGRGGGDGGRGRGGSDLKCYECGESGHFARECRSRGGS--- 120

Query: 121 GGGLRRSPS-----PRRRRSPSYERYGRRSNSPRGKRSPRRRSITPPKRGRSYSRSPPYR 180
            GG RRS S     PR R+SP+Y   GRRS SPR +  P  R  +P  RGR+YSRSPP  
Sbjct: 121 -GGRRRSRSRSRSPPRYRKSPTYG--GRRSYSPRARSPPPPRRRSPSPRGRNYSRSPPPY 180

Query: 181 HARRASPYANGD 188
            AR   PYANG+
Sbjct: 181 RARDEVPYANGN 186

[Close]

BLAST of Cmc10g0268541 vs. TAIR 10
Match: AT4G31580.1 (serine/arginine-rich 22 )

HSP 1 Score: 228.0 bits (580), Expect = 6.2e-60
Identity = 138/198 (69.70%), Postives = 152/198 (76.77%), Query Frame = 0


Query: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           M+RVY+GNLDPRVTER+LEDEFR FGV+RSVWVARRPPGYAF++F+D RDA DAI+ALDG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60

Query: 61  KNGWRVELSHN--SKGGGGGGGRRGRGAGG-GGGGGDDLKCYECGEPGHFARECRSRGGS 120
           KNGWRVE SHN   +GGGG GG RG G GG GG GG DLKCYECGE GHFARECR+RGG+
Sbjct: 61  KNGWRVEQSHNRGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFARECRNRGGT 120

Query: 121 RGVGGGLRRSPS-----PRRRRSPSYERYGRRSNSPRGKR--SPRRRSIT-PPKRGRSYS 180
                G RRS S     PR RRSPS   YGRRS SPR +    PRRRS + PP RGRSYS
Sbjct: 121 -----GRRRSKSRSRTPPRYRRSPS---YGRRSYSPRARSPPPPRRRSPSPPPARGRSYS 180

Query: 181 RSPPYRHARRASPYANGD 188
           RSPP   AR   PYANG+
Sbjct: 181 RSPPPYRAREEVPYANGN 190

The following BLAST results are available for this feature:

BLAST of Cmc10g0268541 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446226.1	1.6e-97	100.00	PREDICTED: serine/arginine-rich splicing factor RSZ21 [Cucumis melo] >XP_0084462...	[more]
TYK15593.1	7.7e-97	100.00	serine/arginine-rich splicing factor RSZ21 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_011655636.1	1.1e-95	98.94	serine/arginine-rich splicing factor RSZ21 [Cucumis sativus] >KAE8648723.1 hypot...	[more]
XP_023004543.1	1.4e-93	97.34	serine/arginine-rich splicing factor RSZ21-like [Cucurbita maxima]	[more]
KAG7012825.1	1.8e-93	96.30	Serine/arginine-rich splicing factor RSZ21A [Cucurbita argyrosperma subsp. argyr...	[more]

BLAST of Cmc10g0268541 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81127	2.4e-64	71.50	Serine/arginine-rich splicing factor RSZ21 OS=Arabidopsis thaliana OX=3702 GN=RS...	[more]
O81126	8.7e-59	69.70	Serine/arginine-rich splicing factor RSZ22 OS=Arabidopsis thaliana OX=3702 GN=RS...	[more]
Q9SJA6	8.7e-59	68.23	Serine/arginine-rich splicing factor RSZ22A OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q69KL9	3.8e-54	65.79	Serine/arginine-rich splicing factor RSZ21A OS=Oryza sativa subsp. japonica OX=3...	[more]
Q6K4N0	2.7e-52	64.55	Serine/arginine-rich splicing factor RSZ21 OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of Cmc10g0268541 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BEJ4	7.6e-98	100.00	serine/arginine-rich splicing factor RSZ21 OS=Cucumis melo OX=3656 GN=LOC1034890...	[more]
A0A5D3CUM7	3.7e-97	100.00	Serine/arginine-rich splicing factor RSZ21 isoform X1 OS=Cucumis melo var. makuw...	[more]
A0A6J1KZV2	6.6e-94	97.34	serine/arginine-rich splicing factor RSZ21-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GX57	4.7e-92	96.81	serine/arginine-rich splicing factor RSZ21-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1G1N9	1.1e-91	95.19	serine/arginine-rich splicing factor RSZ21-like isoform X1 OS=Cucurbita moschata...	[more]

BLAST of Cmc10g0268541 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23860.1	1.7e-65	71.50	RS-containing zinc finger protein 21	[more]
AT1G23860.2	1.7e-65	71.50	RS-containing zinc finger protein 21	[more]
AT1G23860.4	2.1e-63	70.00	RS-containing zinc finger protein 21	[more]
AT2G24590.1	6.2e-60	68.23	RNA recognition motif and CCHC-type zinc finger domains containing protein	[more]
AT4G31580.1	6.2e-60	69.70	serine/arginine-rich 22	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 3..69 e-value: 7.6E-18 score: 75.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 4..61 e-value: 2.2E-16 score: 59.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 2..73 score: 16.107859
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 97..113 e-value: 1.9E-5 score: 34.1
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 97..112 e-value: 7.9E-8 score: 32.0
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 97..113 score: 11.037273
None	No IPR available	GENE3D	4.10.60.10		coord: 97..140 e-value: 9.4E-8 score: 33.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..187
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 2..185
None	No IPR available	PANTHER	PTHR23147:SF164	SERINE/ARGININE-RICH SPLICING FACTOR RSZ21A-LIKE ISOFORM X1	coord: 2..185
None	No IPR available	CDD	cd12373	RRM_SRSF3_like	coord: 3..71 e-value: 1.03222E-34 score: 115.41
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..96 e-value: 9.6E-23 score: 82.8
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 2..92
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 88..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0268541.1	Cmc10g0268541.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016607	nuclear speck
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding