Cmc10g0267541 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGACAATTAGCCAATAGCCACTCCTCGTGGTTAAAAATTCCTTTTTGACAAACTTTGCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTACCCCTCTTTCCTTTTTCTTACCACAAAGTATAGAATTTGAATTTCAAGTTATGGGTTCGGGGAATTTTCTTCAAGTCGTGGCTAATAACTTCGATGTTCTTGCTCTGTTTAGTATTATCATTTCTTTCATTTCGTTATGCTAATTTGATTTATGAAACACATTGCCTAATTGTGTGTCTTAAATTTTGATTTGATTTGATTTGATTGTTTTTGTTTGTAGGCCTGTGGTTTCTCTGGTGTATCCTCTGTAAGTGAGAAATAATATTAGTTTAGATTGTTGAATAAATTAATTAAAGAGTTATTGTTTATGAGTTTTAATTATTGTCACATTTATTTTATTTGGGGGTTTTTAATTTGATTTTTGTGTTTGAAAATGATGTATTATTATATCGTATAGTTACGCTTCCATCAAAGCTATAGAGACGAAGTCAATAGTGGACGACCAACAATGGCTTACTTACTGGGTTTTGTACTCTCTCATGACTCTTTTTGAGCTCACGTTTGCCAAAATACTTGAAGTGTAAGACATTTTCATCTTTCTCTATCTTCAACTATATGTAGATAAGGAGCATGATAGTATTGAAAAATCGAGTCGATCGACCAAATTGAATCAGTTGAAGATAGGAAAAGTCCTGGTTGTTGTTGGTTAACATTTTAAAAAGTTTTAAAAATTTAAATTGACCTAAATCGAACATCCTATCTGTTTTTATTTTATCAAATCTAAGCTACATTTTGAATTCTAAAGTTGTTTTAGTCTAGTCTAGGTAGTTAATTAGCTAATTTTTCAGAACATCGAAATTAAAACAAATTTTAAAAGCTACTTTTCTCTATTGTTTTCAAAATAAAATGCTCTTAGAATATAGACAATATTAAATTATTCGTTTTATAAATTTAATATTGTAAACCAAAATATATAAACTATTAGATAAAATGGTTGTTTATAAACTTGGTTAAAAGAAAAGAAAGAATTAGTAAACAAACCTAATTTTTAGCTAAGCAGTATACTTAAACCATGCATTTTGGTTTTAGAATTATGATATCATGTCTTATATAATTAAATTTACAAAAATTCATTAGCTTAATCTTTCCAATATCATGACTTGTTTTAAAATGTGTAGACAAGATGTAACTTTGTCGACAAGTTTTGTTACATTTGATGTTTAAGCAAATATATATATATATATATATATTTTGCAGGGTTGCGATTTGGCCATATGTGAAACTAATAATAATGAGTTGGTTAGTTCTACCACATTTCAATGGGGCATCACATGTTTACAAAAACTTCATTAGGCCACATTATATGAACCCTCAAACCTCTACACTATGGTACATTCCTCGTAAGACCAAACATATTTTCAGTACCCAAGATGATGTTTTAACAGCTGCTGAGAAGTACATGGAAGAGCATGGGACTGAAGCTTTCGAAAGGCTTATGTATAAGGTTTGTCTTCTGAATTAAATGAATACTTTAATGATATATTTATATAGTCCATATGATCCTGATATAATTTCTTGTTTGTGAACTTTAGCAGGCTGAAAGAGAGAGATCGAGAAGGAACAACAATTACATGATTTTCGATGATGATTATGCGTATTGAAATCTCGAATCTATATATATAATTTATTACCTAAATAATTGCGTATAATCTTGATTTAGTGTATTAAGTGAGTCCATTCAACGAGGCGTATGTTAAAGTTTAGTCACTTTTTTGTATGGAAATATGTACTTTAACTAATATTGTTTATGCATAAGATTGGAAGGATTCGTGTTAGCTTAATTTTATGATGTGTGATTTCAATTTCTCA GGACAATTAGCCAATAGCCACTCCTCGTGGTTAAAAATTCCTTTTTGACAAACTTTGCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTACCCCTCTTTCCTTTTTCTTACCACAAAGTATAGAATTTGAATTTCAAGTTATGGGTTCGGGGAATTTTCTTCAAGTCGTGGCTAATAACTTCGATGTTCTTGCTCTGCCTGTGGTTTCTCTGGTGTATCCTCTTTACGCTTCCATCAAAGCTATAGAGACGAAGTCAATAGTGGACGACCAACAATGGCTTACTTACTGGGTTTTGTACTCTCTCATGACTCTTTTTGAGCTCACGTTTGCCAAAATACTTGAAGTGGTTGCGATTTGGCCATATGTGAAACTAATAATAATGAGTTGGTTAGTTCTACCACATTTCAATGGGGCATCACATGTTTACAAAAACTTCATTAGGCCACATTATATGAACCCTCAAACCTCTACACTATGGTACATTCCTCGTAAGACCAAACATATTTTCAGTACCCAAGATGATGTTTTAACAGCTGCTGAGAAGTACATGGAAGAGCATGGGACTGAAGCTTTCGAAAGGCTTATGTATAAGGCTGAAAGAGAGAGATCGAGAAGGAACAACAATTACATGATTTTCGATGATGATTATGCGTATTGAAATCTCGAATCTATATATATAATTTATTACCTAAATAATTGCGTATAATCTTGATTTAGTGTATTAAGTGAGTCCATTCAACGAGGCGTATGTTAAAGTTTAGTCACTTTTTTGTATGGAAATATGTACTTTAACTAATATTGTTTATGCATAAGATTGGAAGGATTCGTGTTAGCTTAATTTTATGATGTGTGATTTCAATTTCTCA ATGGGTTCGGGGAATTTTCTTCAAGTCGTGGCTAATAACTTCGATGTTCTTGCTCTGCCTGTGGTTTCTCTGGTGTATCCTCTTTACGCTTCCATCAAAGCTATAGAGACGAAGTCAATAGTGGACGACCAACAATGGCTTACTTACTGGGTTTTGTACTCTCTCATGACTCTTTTTGAGCTCACGTTTGCCAAAATACTTGAAGTGGTTGCGATTTGGCCATATGTGAAACTAATAATAATGAGTTGGTTAGTTCTACCACATTTCAATGGGGCATCACATGTTTACAAAAACTTCATTAGGCCACATTATATGAACCCTCAAACCTCTACACTATGGTACATTCCTCGTAAGACCAAACATATTTTCAGTACCCAAGATGATGTTTTAACAGCTGCTGAGAAGTACATGGAAGAGCATGGGACTGAAGCTTTCGAAAGGCTTATGTATAAGGCTGAAAGAGAGAGATCGAGAAGGAACAACAATTACATGATTTTCGATGATGATTATGCGTATTGA MGSGNFLQVVANNFDVLALPVVSLVYPLYASIKAIETKSIVDDQQWLTYWVLYSLMTLFELTFAKILEVVAIWPYVKLIIMSWLVLPHFNGASHVYKNFIRPHYMNPQTSTLWYIPRKTKHIFSTQDDVLTAAEKYMEEHGTEAFERLMYKAERERSRRNNNYMIFDDDYAY Homology
BLAST of Cmc10g0267541 vs. NCBI nr
Match: XP_008446336.1 (PREDICTED: HVA22-like protein c isoform X2 [Cucumis melo]) HSP 1 Score: 343.6 bits (880), Expect = 1.0e-90 Identity = 171/172 (99.42%), Postives = 171/172 (99.42%), Query Frame = 0
BLAST of Cmc10g0267541 vs. NCBI nr
Match: XP_008446335.1 (PREDICTED: HVA22-like protein c isoform X1 [Cucumis melo]) HSP 1 Score: 339.0 bits (868), Expect = 2.5e-89 Identity = 171/173 (98.84%), Postives = 171/173 (98.84%), Query Frame = 0
BLAST of Cmc10g0267541 vs. NCBI nr
Match: XP_038893173.1 (HVA22-like protein c isoform X2 [Benincasa hispida]) HSP 1 Score: 339.0 bits (868), Expect = 2.5e-89 Identity = 169/172 (98.26%), Postives = 170/172 (98.84%), Query Frame = 0
BLAST of Cmc10g0267541 vs. NCBI nr
Match: XP_011655675.1 (HVA22-like protein c isoform X2 [Cucumis sativus]) HSP 1 Score: 337.8 bits (865), Expect = 5.5e-89 Identity = 169/172 (98.26%), Postives = 170/172 (98.84%), Query Frame = 0
BLAST of Cmc10g0267541 vs. NCBI nr
Match: XP_038893172.1 (HVA22-like protein c isoform X1 [Benincasa hispida]) HSP 1 Score: 334.3 bits (856), Expect = 6.0e-88 Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 0
BLAST of Cmc10g0267541 vs. ExPASy Swiss-Prot
Match: Q9S784 (HVA22-like protein c OS=Arabidopsis thaliana OX=3702 GN=HVA22C PE=2 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 7.5e-57 Identity = 114/179 (63.69%), Postives = 141/179 (78.77%), Query Frame = 0
BLAST of Cmc10g0267541 vs. ExPASy Swiss-Prot
Match: Q9S7V4 (HVA22-like protein a OS=Arabidopsis thaliana OX=3702 GN=HVA22A PE=2 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 1.0e-50 Identity = 95/169 (56.21%), Postives = 136/169 (80.47%), Query Frame = 0
BLAST of Cmc10g0267541 vs. ExPASy Swiss-Prot
Match: Q9SYX7 (HVA22-like protein b OS=Arabidopsis thaliana OX=3702 GN=HVA22B PE=2 SV=2) HSP 1 Score: 145.6 bits (366), Expect = 5.2e-34 Identity = 75/171 (43.86%), Postives = 114/171 (66.67%), Query Frame = 0
BLAST of Cmc10g0267541 vs. ExPASy Swiss-Prot
Match: Q682H0 (HVA22-like protein f OS=Arabidopsis thaliana OX=3702 GN=HVA22F PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.8e-26 Identity = 62/153 (40.52%), Postives = 98/153 (64.05%), Query Frame = 0
BLAST of Cmc10g0267541 vs. ExPASy Swiss-Prot
Match: Q9FED2 (HVA22-like protein e OS=Arabidopsis thaliana OX=3702 GN=HVA22E PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 9.6e-20 Identity = 47/88 (53.41%), Postives = 62/88 (70.45%), Query Frame = 0
BLAST of Cmc10g0267541 vs. ExPASy TrEMBL
Match: A0A1S3BFI0 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103489106 PE=3 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 4.8e-91 Identity = 171/172 (99.42%), Postives = 171/172 (99.42%), Query Frame = 0
BLAST of Cmc10g0267541 vs. ExPASy TrEMBL
Match: A0A1S3BEU0 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103489106 PE=3 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 1.2e-89 Identity = 171/173 (98.84%), Postives = 171/173 (98.84%), Query Frame = 0
BLAST of Cmc10g0267541 vs. ExPASy TrEMBL
Match: A0A0A0KQK2 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G604990 PE=3 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 6.5e-88 Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 0
BLAST of Cmc10g0267541 vs. ExPASy TrEMBL
Match: A0A6J1HX10 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111467434 PE=3 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 3.7e-83 Identity = 157/173 (90.75%), Postives = 166/173 (95.95%), Query Frame = 0
BLAST of Cmc10g0267541 vs. ExPASy TrEMBL
Match: A0A6J1FZG8 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449339 PE=3 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 3.7e-83 Identity = 157/173 (90.75%), Postives = 166/173 (95.95%), Query Frame = 0
BLAST of Cmc10g0267541 vs. TAIR 10
Match: AT1G69700.1 (HVA22 homologue C ) HSP 1 Score: 221.5 bits (563), Expect = 5.3e-58 Identity = 114/179 (63.69%), Postives = 141/179 (78.77%), Query Frame = 0
BLAST of Cmc10g0267541 vs. TAIR 10
Match: AT1G74520.1 (HVA22 homologue A ) HSP 1 Score: 201.1 bits (510), Expect = 7.4e-52 Identity = 95/169 (56.21%), Postives = 136/169 (80.47%), Query Frame = 0
BLAST of Cmc10g0267541 vs. TAIR 10
Match: AT5G62490.1 (HVA22 homologue B ) HSP 1 Score: 145.6 bits (366), Expect = 3.7e-35 Identity = 75/171 (43.86%), Postives = 114/171 (66.67%), Query Frame = 0
BLAST of Cmc10g0267541 vs. TAIR 10
Match: AT2G42820.1 (HVA22-like protein F ) HSP 1 Score: 120.6 bits (301), Expect = 1.3e-27 Identity = 62/153 (40.52%), Postives = 98/153 (64.05%), Query Frame = 0
BLAST of Cmc10g0267541 vs. TAIR 10
Match: AT5G50720.1 (HVA22 homologue E ) HSP 1 Score: 98.2 bits (243), Expect = 6.8e-21 Identity = 47/88 (53.41%), Postives = 62/88 (70.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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