Cmc10g0267231 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0267231
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	CASP-like protein
Location	CMiso1.1chr10: 2750056 .. 2751953 (-)
RNA-Seq Expression	Cmc10g0267231
Synteny	Cmc10g0267231

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAAACAGAGAGAAGTTGAGAATTTGATCAAATTAAATGGGAAAGACAAAGACAGAGAGTGGAGAAATTCAAAATTTGGGTTCAAAGTTCAAGAACCCAATTGGAGAAGGAGCTCAGAGAGGGCTAGCCATAGTGGACTTGGTGGTGAGAGTAATGGCAACAATGGCTACTTTAAGTAGTGCAATAGTAATGGGCACAGCTAATCAAACTTTGCCATTTTCAACACAATCTTCTCAGTTCAAGGCCAACTATAAAGATCTTCCTATGTTTATGTAAAAATAATTTTAATTTTAGTCAGTAGCAAGATATATTATATGTGTGCGTTATGTTTCTATATATAAATTAAGTTAAAATTAAACTTTACAGGTTCTTTGTGGTTGCAAATGCCATAGTTTGTGGGTATCTGTTTCTATCTCTTCCTCTGTCCATTTTCCATGTCATGGAAGTTGCATCAGTCACTCCTAGGCTCATTTTGCTCATCTTTGACACGGTACCTTCGTTCTCTTTCCCTTTTCTTTTAATAACTTTCACCACTCTAAATTTTAAGTGTTATTTTTTTTAACTATTTAAAAAATTAAGCACCTAAATACTATTGATTTGTATATTATGTTGTATACATTTTATTAGTGTTTTCAAAATTCAAGTGGAACCACTCTTTGAAAGTTGATGAAAAAGAATTATATTATTTTTAATTTGTACTTTGTTTTTTAAATTTGGCCTACATGAAAGTATATATGAAAGTCATGATAAGAAAAATCAGAAAAATAGTGTGAATTACAATTTAAAAAAAAAAACAAAGAAATAAAATAAAATAGTTGTCAAATAAGATTAACTATTTGTTAAATAGAATTTGGATATATTTCAATTTTATAAAATTAATCCATTTGTTAATTTTATGTATTAGTATAATGAATTTTTTTAAAAAAAATAAAAAAGTTCGAAAAATAATTTATAAATAAACAAAACCGATACAATTTACTATACCTGTCCTTTTATAAGATATAAATATTTTGTCAAATATTTTAATTTTAACCATTTTTTTAATATATTAATATAATCCTAACGTTTCGCTCTAACAATTGTTGGTATTTTTCCTATAAACTCTACTTCTACTAATGAGTTGTTTTTTTCTTATTTATTTAATTTCTAATAATATTTTAAAAATCTTGTAAAGTTATTATGACTATGAAAATGATTTTTGAAAACAGTTTAAGGTTTGTTTAGTGGAGAATTTAAAACCTAGCATATTCATAAGAAAGGAAGTTGGCCACTTTTTAGAAATGAAATAGCTGTGGAATTAGATTTAAATTTTTAATTTGATGTCTAATAGAGACATAAATTTATAGATCTATTATTCAACATAAAATTGAAGATTCTAACGTGCTAAACAATTTTAAAGTTTATAGACAAAATAAAAATGCAAATCTCAAATGTTTTCATGAATCAAACTTATGATTTAGTTTTTAAATTTTTTAACGCAGTAAAAAGATTTTAAACCTAATCCTTTACCACCTCTTAAGTATTTGATGCTTATTTGTGGCACTATATTTAAATACACGAAAGATGGCAATGGTGCTTGCAACAGCTGGTGCTTCGACAGCAGCATCTGCAGTCTACTTGGCATATCGAGGCAATGTTGCTGCCAATTGGGTTTCATTTTGTACCCAATTTGACTCTTTTTGTCGACGTATTTCTGGATCTTTGATTGGCTCTTTTTGTGCCGTCTTTGCTTTCATGCTTCTTATTATTATTTCGGTTGTAGCAATGGTTCGACGCTCATCATAAAACAATACAACGATAAAAAACATTAATAACGAGAAGTTAATAACGTTTGAAACTATACTAAAGTGTGATATGTAACATCTGAAAAATAAAAAAATACTAATAAATAAAAGTG

mRNA sequence

CTTAAACAGAGAGAAGTTGAGAATTTGATCAAATTAAATGGGAAAGACAAAGACAGAGAGTGGAGAAATTCAAAATTTGGGTTCAAAGTTCAAGAACCCAATTGGAGAAGGAGCTCAGAGAGGGCTAGCCATAGTGGACTTGGTGGTGAGAGTAATGGCAACAATGGCTACTTTAAGTAGTGCAATAGTAATGGGCACAGCTAATCAAACTTTGCCATTTTCAACACAATCTTCTCAGTTCAAGGCCAACTATAAAGATCTTCCTATGTTTATGTTCTTTGTGGTTGCAAATGCCATAGTTTGTGGGTATCTGTTTCTATCTCTTCCTCTGTCCATTTTCCATGTCATGGAAGTTGCATCAGTCACTCCTAGGCTCATTTTGCTCATCTTTGACACGATGGCAATGGTGCTTGCAACAGCTGGTGCTTCGACAGCAGCATCTGCAGTCTACTTGGCATATCGAGGCAATGTTGCTGCCAATTGGGTTTCATTTTGTACCCAATTTGACTCTTTTTGTCGACGTATTTCTGGATCTTTGATTGGCTCTTTTTGTGCCGTCTTTGCTTTCATGCTTCTTATTATTATTTCGGTTGTAGCAATGGTTCGACGCTCATCATAAAACAATACAACGATAAAAAACATTAATAACGAGAAGTTAATAACGTTTGAAACTATACTAAAGTGTGATATGTAACATCTGAAAAATAAAAAAATACTAATAAATAAAAGTG

Coding sequence (CDS)

ATGGGAAAGACAAAGACAGAGAGTGGAGAAATTCAAAATTTGGGTTCAAAGTTCAAGAACCCAATTGGAGAAGGAGCTCAGAGAGGGCTAGCCATAGTGGACTTGGTGGTGAGAGTAATGGCAACAATGGCTACTTTAAGTAGTGCAATAGTAATGGGCACAGCTAATCAAACTTTGCCATTTTCAACACAATCTTCTCAGTTCAAGGCCAACTATAAAGATCTTCCTATGTTTATGTTCTTTGTGGTTGCAAATGCCATAGTTTGTGGGTATCTGTTTCTATCTCTTCCTCTGTCCATTTTCCATGTCATGGAAGTTGCATCAGTCACTCCTAGGCTCATTTTGCTCATCTTTGACACGATGGCAATGGTGCTTGCAACAGCTGGTGCTTCGACAGCAGCATCTGCAGTCTACTTGGCATATCGAGGCAATGTTGCTGCCAATTGGGTTTCATTTTGTACCCAATTTGACTCTTTTTGTCGACGTATTTCTGGATCTTTGATTGGCTCTTTTTGTGCCGTCTTTGCTTTCATGCTTCTTATTATTATTTCGGTTGTAGCAATGGTTCGACGCTCATCATAA

Protein sequence

MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDTMAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLLIIISVVAMVRRSS

Homology

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BLAST of Cmc10g0267231 vs. NCBI nr
Match: XP_008446384.1 (PREDICTED: casparian strip membrane protein 1 [Cucumis melo] >KAA0034436.1 casparian strip membrane protein 1 [Cucumis melo var. makuwa] >TYK17698.1 casparian strip membrane protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 354.0 bits (907), Expect = 8.3e-94
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP 60
           MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP
Sbjct: 1   MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP 60

Query: 61  FSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT 120
           FSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT
Sbjct: 61  FSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT 120

Query: 121 MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLL 180
           MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLL
Sbjct: 121 MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLL 180

Query: 181 IIISVVAMVRRSS 194
           IIISVVAMVRRSS
Sbjct: 181 IIISVVAMVRRSS 193

[Close]

BLAST of Cmc10g0267231 vs. NCBI nr
Match: XP_031742030.1 (casparian strip membrane protein 1-like isoform X1 [Cucumis sativus])

HSP 1 Score: 335.9 bits (860), Expect = 2.3e-88
Identity = 183/193 (94.82%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 1   MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP 60
           MGKTKTESGE Q LGSKF+NPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP
Sbjct: 1   MGKTKTESGETQILGSKFENPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP 60

Query: 61  FSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT 120
           FSTQ+SQFKANYKDLPMFMFFV+AN+IVCGYLFLSLPLSIFH+MEVASVTPRLILLIFD 
Sbjct: 61  FSTQTSQFKANYKDLPMFMFFVLANSIVCGYLFLSLPLSIFHIMEVASVTPRLILLIFDM 120

Query: 121 MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLL 180
           MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSF AVFAFMLL
Sbjct: 121 MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFGAVFAFMLL 180

Query: 181 IIISVVAMVRRSS 194
           IIIS+VAMVRRSS
Sbjct: 181 IIISIVAMVRRSS 193

[Close]

BLAST of Cmc10g0267231 vs. NCBI nr
Match: XP_038891857.1 (casparian strip membrane protein 1-like [Benincasa hispida])

HSP 1 Score: 303.9 bits (777), Expect = 9.8e-79
Identity = 164/193 (84.97%), Postives = 175/193 (90.67%), Query Frame = 0


Query: 1   MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP 60
           M K K+ESG+   LGSKF NPIGEGAQRGLAIVDLV+RVMA MATLSSA+VMGTANQTLP
Sbjct: 1   MAKAKSESGDQVPLGSKFSNPIGEGAQRGLAIVDLVLRVMAIMATLSSAVVMGTANQTLP 60

Query: 61  FSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT 120
           FSTQSSQFKANYKDLPMFMFFV+AN++VCGYLFLSLPLSIF +MEVASVTPRLILLIFD 
Sbjct: 61  FSTQSSQFKANYKDLPMFMFFVLANSLVCGYLFLSLPLSIFQIMEVASVTPRLILLIFDM 120

Query: 121 MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLL 180
           MAMVL TAGASTAAS VYLAYRGN AANWVSFCTQFDSFCR ISGSLIGSF A+  FM L
Sbjct: 121 MAMVLGTAGASTAASTVYLAYRGNAAANWVSFCTQFDSFCRHISGSLIGSFVAILTFMFL 180

Query: 181 IIISVVAMVRRSS 194
           III V+AM+RRSS
Sbjct: 181 IIIYVIAMLRRSS 193

[Close]

BLAST of Cmc10g0267231 vs. NCBI nr
Match: XP_022151205.1 (casparian strip membrane protein 1 [Momordica charantia])

HSP 1 Score: 252.7 bits (644), Expect = 2.6e-63
Identity = 141/193 (73.06%), Postives = 158/193 (81.87%), Query Frame = 0


Query: 1   MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP 60
           M +       ++  G K  NPIGEGAQR L+IVDLV+RVMA MATLSSA+VM TANQTLP
Sbjct: 1   MEREMKAKSSVEENGPKRCNPIGEGAQRRLSIVDLVLRVMAAMATLSSAVVMATANQTLP 60

Query: 61  FSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT 120
           FSTQSSQFKA+YKDLP F FFV+AN+IVCGYLFL LPLSIF ++EVA+VTPRLILL FDT
Sbjct: 61  FSTQSSQFKADYKDLPTFTFFVMANSIVCGYLFLCLPLSIFQMVEVAAVTPRLILLTFDT 120

Query: 121 MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLL 180
           MAM L  AGAS AAS VYLAYRGN AANWVSFCTQF+SFC+ ISGSLIGSF AVFA +LL
Sbjct: 121 MAMALVAAGASAAASVVYLAYRGNDAANWVSFCTQFNSFCQHISGSLIGSFGAVFALILL 180

Query: 181 IIISVVAMVRRSS 194
           I IS  ++ RR S
Sbjct: 181 ISISATSISRRPS 193

[Close]

BLAST of Cmc10g0267231 vs. NCBI nr
Match: XP_022968095.1 (casparian strip membrane protein 3-like [Cucurbita maxima])

HSP 1 Score: 240.7 bits (613), Expect = 1.0e-59
Identity = 136/192 (70.83%), Postives = 155/192 (80.73%), Query Frame = 0


Query: 1   MGKTKTESGEIQNLGSKFKNPI-GEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTL 60
           M ++K +S     LGSK + P  G GAQRGL IVDLV+RV+A MATL SAIVMGTA+QTL
Sbjct: 3   MDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLTIVDLVLRVVALMATLCSAIVMGTAHQTL 62

Query: 61  PFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFD 120
           PFSTQS+QFKA YKDLPMFMFFV+ N++ CGYLFLSLPLSIF +++VASVTPRL LLIFD
Sbjct: 63  PFSTQSTQFKAVYKDLPMFMFFVLVNSVACGYLFLSLPLSIFQMVKVASVTPRLTLLIFD 122

Query: 121 TMAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFML 180
           TMAM L TAGAS AAS VYLAY+GN   NW SFC+QFDSFCRR S SLIGSF AV   +L
Sbjct: 123 TMAMALETAGASVAASVVYLAYQGNTVVNWASFCSQFDSFCRRSSQSLIGSFGAVLVLVL 182

Query: 181 LIIISVVAMVRR 192
           LI +S +AM RR
Sbjct: 183 LITLSAIAMSRR 194

[Close]

BLAST of Cmc10g0267231 vs. ExPASy Swiss-Prot
Match: P0DI33 (Casparian strip membrane protein 1 OS=Panicum virgatum OX=38727 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.3e-46
Identity = 102/185 (55.14%), Postives = 133/185 (71.89%), Query Frame = 0


Query: 7   ESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSS 66
           ESGE    G   K P+  G  +GL+++DL++R +A + TL+SAI MGT N+TLPF TQ  
Sbjct: 3   ESGE---HGETSKAPLNRGVSKGLSVLDLILRFIAIIGTLASAIAMGTTNETLPFFTQFI 62

Query: 67  QFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDTMAMVLA 126
           +FKA Y DLP   FFVVAN+IVC YL LSLPLSI H++   +   RL+L+  D + + L 
Sbjct: 63  RFKAQYSDLPTLTFFVVANSIVCAYLILSLPLSIVHIIRSRAKFSRLLLIFLDAVMLALV 122

Query: 127 TAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLLIIISVV 186
           TAGAS AA+ VYLA++GNV ANW++ C QFDSFC RISGSLIGSF A+   +LLI++S +
Sbjct: 123 TAGASAAAAIVYLAHKGNVRANWLAICQQFDSFCERISGSLIGSFGAMVVLILLILLSAI 182

Query: 187 AMVRR 192
           A+ RR
Sbjct: 183 ALARR 184

[Close]

BLAST of Cmc10g0267231 vs. ExPASy Swiss-Prot
Match: P0DI36 (Casparian strip membrane protein 3 OS=Brachypodium distachyon OX=15368 GN=Bradi1g45110 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.3e-45
Identity = 99/177 (55.93%), Postives = 123/177 (69.49%), Query Frame = 0


Query: 15  GSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKD 74
           G   K P+ +G  RGL I+DL+ RV+A + TL+SAI MGT NQT+PF TQ  QFK  Y D
Sbjct: 8   GETSKGPLSKGVSRGLCILDLIFRVIAVIGTLASAIAMGTTNQTMPFFTQFVQFKERYSD 67

Query: 75  LPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDTMAMVLATAGASTAA 134
           LP   FFVVAN+I   YL +SLPLSI H++   +   RLIL+ FD   + L TA AS  A
Sbjct: 68  LPTLTFFVVANSIASAYLIISLPLSIVHIIRSRAKYSRLILIFFDVAMLALVTAAASAGA 127

Query: 135 SAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLLIIISVVAMVRR 192
           + VYLA+ GNV+ANW + C QFDSFC RISGSLIGSF A+   +LLI++S VA+ RR
Sbjct: 128 AIVYLAHNGNVSANWFAICQQFDSFCERISGSLIGSFAAMVVLILLILLSAVALARR 184

[Close]

BLAST of Cmc10g0267231 vs. ExPASy Swiss-Prot
Match: A2YAZ1 (Casparian strip membrane protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_22263 PE=2 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.3e-45
Identity = 99/177 (55.93%), Postives = 126/177 (71.19%), Query Frame = 0


Query: 15  GSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKD 74
           G   K P+  G  +G++I+D+++R +A + TL+SAI MGT NQTLPF TQ  +FKA Y D
Sbjct: 8   GETSKAPLSRGVSKGVSILDVILRFVAIIGTLASAIAMGTTNQTLPFFTQFIRFKAQYSD 67

Query: 75  LPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDTMAMVLATAGASTAA 134
           LP   FFVVAN+IV  YL LSLPLSI HV+   +   RLIL+ FD   + L TAGAS AA
Sbjct: 68  LPTLTFFVVANSIVSAYLILSLPLSIVHVIRSRAKYSRLILIFFDAAMLALVTAGASAAA 127

Query: 135 SAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLLIIISVVAMVRR 192
           + VYLA++GN  ANW++ C QFDSFC RISGSLIGSF A+   +LLI +S +A+ RR
Sbjct: 128 AIVYLAHKGNARANWLAICQQFDSFCERISGSLIGSFAAMVVLVLLIFLSAIALARR 184

[Close]

BLAST of Cmc10g0267231 vs. ExPASy Swiss-Prot
Match: Q67X40 (Casparian strip membrane protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0231050 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.3e-45
Identity = 99/177 (55.93%), Postives = 126/177 (71.19%), Query Frame = 0


Query: 15  GSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKD 74
           G   K P+  G  +G++I+D+++R +A + TL+SAI MGT NQTLPF TQ  +FKA Y D
Sbjct: 8   GETSKAPLSRGVSKGVSILDVILRFVAIIGTLASAIAMGTTNQTLPFFTQFIRFKAQYSD 67

Query: 75  LPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDTMAMVLATAGASTAA 134
           LP   FFVVAN+IV  YL LSLPLSI HV+   +   RLIL+ FD   + L TAGAS AA
Sbjct: 68  LPTLTFFVVANSIVSAYLILSLPLSIVHVIRSRAKYSRLILIFFDAAMLALVTAGASAAA 127

Query: 135 SAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLLIIISVVAMVRR 192
           + VYLA++GN  ANW++ C QFDSFC RISGSLIGSF A+   +LLI +S +A+ RR
Sbjct: 128 AIVYLAHKGNARANWLAICQQFDSFCERISGSLIGSFAAMVVLVLLIFLSAIALARR 184

[Close]

BLAST of Cmc10g0267231 vs. ExPASy Swiss-Prot
Match: B9T4E6 (Casparian strip membrane protein 5 OS=Ricinus communis OX=3988 GN=RCOM_0299440 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.3e-45
Identity = 100/177 (56.50%), Postives = 133/177 (75.14%), Query Frame = 0


Query: 16  SKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDL 75
           +K   PIG GA RG++I+D ++R++A + TL+SAI+MGT N+TLPF+TQ  +F+A Y DL
Sbjct: 11  AKDSTPIG-GANRGVSILDFILRLVALVGTLASAILMGTTNETLPFATQFIRFRAEYDDL 70

Query: 76  PMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDTMAMVLATAGASTAAS 135
           P F FFVVAN +V GYL LSLPLSI +++   +   R+IL+IFDT  + L TAGAS AA+
Sbjct: 71  PTFTFFVVANIVVSGYLLLSLPLSIVNIVRSTAKNRRIILIIFDTAMLALLTAGASAAAA 130

Query: 136 AVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLLIIISVVAMVRRS 193
            VYLA++GN  ANW + C QF+SFC RISGSLIGSF  V  F+LLI++S  A+ RR+
Sbjct: 131 IVYLAHKGNTRANWFAICQQFNSFCERISGSLIGSFVGVAVFILLILMSASALSRRN 186

[Close]

BLAST of Cmc10g0267231 vs. ExPASy TrEMBL
Match: A0A5A7SX44 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00250 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.0e-94
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP 60
           MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP
Sbjct: 1   MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP 60

Query: 61  FSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT 120
           FSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT
Sbjct: 61  FSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT 120

Query: 121 MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLL 180
           MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLL
Sbjct: 121 MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLL 180

Query: 181 IIISVVAMVRRSS 194
           IIISVVAMVRRSS
Sbjct: 181 IIISVVAMVRRSS 193

[Close]

BLAST of Cmc10g0267231 vs. ExPASy TrEMBL
Match: A0A1S3BFR8 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103489141 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.0e-94
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP 60
           MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP
Sbjct: 1   MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP 60

Query: 61  FSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT 120
           FSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT
Sbjct: 61  FSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT 120

Query: 121 MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLL 180
           MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLL
Sbjct: 121 MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLL 180

Query: 181 IIISVVAMVRRSS 194
           IIISVVAMVRRSS
Sbjct: 181 IIISVVAMVRRSS 193

[Close]

BLAST of Cmc10g0267231 vs. ExPASy TrEMBL
Match: A0A0A0KQP6 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G606300 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 5.2e-86
Identity = 181/193 (93.78%), Postives = 187/193 (96.89%), Query Frame = 0


Query: 1   MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP 60
           MGKTKTESGE Q LGSKF+NPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP
Sbjct: 1   MGKTKTESGETQILGSKFENPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP 60

Query: 61  FSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT 120
           FSTQ+SQFKANYKDLP  MFFV+AN+IVCGYLFLSLPLSIFH+MEVASVTPRLILLIFD 
Sbjct: 61  FSTQTSQFKANYKDLP--MFFVLANSIVCGYLFLSLPLSIFHIMEVASVTPRLILLIFDM 120

Query: 121 MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLL 180
           MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSF AVFAFMLL
Sbjct: 121 MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFGAVFAFMLL 180

Query: 181 IIISVVAMVRRSS 194
           IIIS+VAMVRRSS
Sbjct: 181 IIISIVAMVRRSS 191

[Close]

BLAST of Cmc10g0267231 vs. ExPASy TrEMBL
Match: A0A6J1DAJ8 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111019184 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.3e-63
Identity = 141/193 (73.06%), Postives = 158/193 (81.87%), Query Frame = 0


Query: 1   MGKTKTESGEIQNLGSKFKNPIGEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLP 60
           M +       ++  G K  NPIGEGAQR L+IVDLV+RVMA MATLSSA+VM TANQTLP
Sbjct: 1   MEREMKAKSSVEENGPKRCNPIGEGAQRRLSIVDLVLRVMAAMATLSSAVVMATANQTLP 60

Query: 61  FSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDT 120
           FSTQSSQFKA+YKDLP F FFV+AN+IVCGYLFL LPLSIF ++EVA+VTPRLILL FDT
Sbjct: 61  FSTQSSQFKADYKDLPTFTFFVMANSIVCGYLFLCLPLSIFQMVEVAAVTPRLILLTFDT 120

Query: 121 MAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLL 180
           MAM L  AGAS AAS VYLAYRGN AANWVSFCTQF+SFC+ ISGSLIGSF AVFA +LL
Sbjct: 121 MAMALVAAGASAAASVVYLAYRGNDAANWVSFCTQFNSFCQHISGSLIGSFGAVFALILL 180

Query: 181 IIISVVAMVRRSS 194
           I IS  ++ RR S
Sbjct: 181 ISISATSISRRPS 193

[Close]

BLAST of Cmc10g0267231 vs. ExPASy TrEMBL
Match: A0A6J1HW80 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111467431 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 4.9e-60
Identity = 136/192 (70.83%), Postives = 155/192 (80.73%), Query Frame = 0


Query: 1   MGKTKTESGEIQNLGSKFKNPI-GEGAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTL 60
           M ++K +S     LGSK + P  G GAQRGL IVDLV+RV+A MATL SAIVMGTA+QTL
Sbjct: 3   MDQSKAKSEGEVPLGSKIRYPFGGGGAQRGLTIVDLVLRVVALMATLCSAIVMGTAHQTL 62

Query: 61  PFSTQSSQFKANYKDLPMFMFFVVANAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFD 120
           PFSTQS+QFKA YKDLPMFMFFV+ N++ CGYLFLSLPLSIF +++VASVTPRL LLIFD
Sbjct: 63  PFSTQSTQFKAVYKDLPMFMFFVLVNSVACGYLFLSLPLSIFQMVKVASVTPRLTLLIFD 122

Query: 121 TMAMVLATAGASTAASAVYLAYRGNVAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFML 180
           TMAM L TAGAS AAS VYLAY+GN   NW SFC+QFDSFCRR S SLIGSF AV   +L
Sbjct: 123 TMAMALETAGASVAASVVYLAYQGNTVVNWASFCSQFDSFCRRSSQSLIGSFGAVLVLVL 182

Query: 181 LIIISVVAMVRR 192
           LI +S +AM RR
Sbjct: 183 LITLSAIAMSRR 194

[Close]

BLAST of Cmc10g0267231 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-37
Identity = 83/164 (50.61%), Postives = 118/164 (71.95%), Query Frame = 0


Query: 28  RGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAI 87
           R +AI++ ++R++A   T+ SAI+MGT ++TLPF TQ  +F+A Y DLP   FFVVANA+
Sbjct: 23  RRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVVANAV 82

Query: 88  VCGYLFLSLPLSIFHVMEVASVTPRLILLIFDTMAMVLATAGASTAASAVYLAYRGNVAA 147
           V GYL LSL L+  H+++  +   R++L+I D   + L T+GAS+AA+ VYLA+ GN   
Sbjct: 83  VSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGLLTSGASSAAAIVYLAHNGNNKT 142

Query: 148 NWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLLIIISVVAMVRR 192
           NW + C QF+SFC RISGSLIGSF A+   +LLI++S +A+ RR
Sbjct: 143 NWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIALSRR 186

[Close]

BLAST of Cmc10g0267231 vs. TAIR 10
Match: AT1G14160.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 152.1 bits (383), Expect = 4.4e-37
Identity = 81/163 (49.69%), Postives = 111/163 (68.10%), Query Frame = 0


Query: 28  RGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVANAI 87
           +G++++  V+R+ A   T+ SA+ MGT ++++   +Q    K  Y DLP  MFFVVANAI
Sbjct: 46  KGISVLGFVLRLFAVFGTIGSALAMGTTHESVVSLSQLVLLKVKYSDLPTLMFFVVANAI 105

Query: 88  VCGYLFLSLPLSIFHVMEVASVTPRLILLIFDTMAMVLATAGASTAASAVYLAYRGNVAA 147
             GYL LSLP+SIFH+    + T R+ILL+ DT+ + L ++GAS A + VYLA+ GN  A
Sbjct: 106 SGGYLVLSLPVSIFHIFSTQAKTSRIILLVVDTVMLALVSSGASAATATVYLAHEGNTTA 165

Query: 148 NWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLLIIISVVAMVR 191
           NW   C QFD FC RISGSLIGSFCAV   ML++I S +++ R
Sbjct: 166 NWPPICQQFDGFCERISGSLIGSFCAVILLMLIVINSAISLSR 208

[Close]

BLAST of Cmc10g0267231 vs. TAIR 10
Match: AT5G06200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-36
Identity = 82/166 (49.40%), Postives = 117/166 (70.48%), Query Frame = 0


Query: 25  GAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVA 84
           G +RGL+I D ++R+ A +A L++A  MGT+++TLPF TQ  QF+A+Y DLP F FFVVA
Sbjct: 36  GYKRGLSIFDFLLRLAAIVAALAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVVA 95

Query: 85  NAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDTMAMVLATAGASTAASAVYLAYRGN 144
            AIV GYL LSLP S+  ++   +V PRL+LL+ DT A+ L TA AS AA+ VYLA+ GN
Sbjct: 96  IAIVAGYLVLSLPFSVVTIVRPLAVAPRLLLLVLDTAALALDTAAASAAAAIVYLAHNGN 155

Query: 145 VAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLLIIISVVAMVR 191
              NW+  C QF  FC++ SG+++ +F +V    +L++IS V++ R
Sbjct: 156 TNTNWLPICQQFGDFCQKTSGAVVSAFASVTFLAILVVISGVSLKR 201

[Close]

BLAST of Cmc10g0267231 vs. TAIR 10
Match: AT3G11550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 146.7 bits (369), Expect = 1.9e-35
Identity = 80/166 (48.19%), Postives = 116/166 (69.88%), Query Frame = 0


Query: 25  GAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVA 84
           G  RGLAI D ++R+ A +A L++A  MGT+++TLPF TQ  QF+A+Y DLP F FFV+A
Sbjct: 38  GYNRGLAIFDFLLRLAAIVAALAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVIA 97

Query: 85  NAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDTMAMVLATAGASTAASAVYLAYRGN 144
            A+V GYL LSLP+S+  ++   +  PRL+LL+ DT  + L TA AS+AA+  YLA+ GN
Sbjct: 98  MALVGGYLVLSLPISVVTILRPLATAPRLLLLVLDTGVLALNTAAASSAAAISYLAHSGN 157

Query: 145 VAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLLIIISVVAMVR 191
              NW+  C QF  FC++ SG+++ +F +V  F +L++IS VA+ R
Sbjct: 158 QNTNWLPICQQFGDFCQKSSGAVVSAFVSVVFFTILVVISGVALKR 203

[Close]

BLAST of Cmc10g0267231 vs. TAIR 10
Match: AT2G36100.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 144.8 bits (364), Expect = 7.1e-35
Identity = 81/166 (48.80%), Postives = 112/166 (67.47%), Query Frame = 0


Query: 25  GAQRGLAIVDLVVRVMATMATLSSAIVMGTANQTLPFSTQSSQFKANYKDLPMFMFFVVA 84
           GA+RGLAI D ++R+ A   T+ +A VM TA +TLPF TQ  QF+A Y DLP F +FV+A
Sbjct: 40  GAKRGLAIFDFLLRLAAIAVTIGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVIA 99

Query: 85  NAIVCGYLFLSLPLSIFHVMEVASVTPRLILLIFDTMAMVLATAGASTAASAVYLAYRGN 144
            A+V  YL LSLP SI  ++   +V PRLILLI DT+ + L T+ A+ AAS  YLA+ GN
Sbjct: 100 VAVVASYLVLSLPFSIVSIVRPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGN 159

Query: 145 VAANWVSFCTQFDSFCRRISGSLIGSFCAVFAFMLLIIISVVAMVR 191
            + NW+  C QF  FC+ +S +++    A+  F++LIIIS +A+ R
Sbjct: 160 QSTNWLPICQQFGDFCQNVSTAVVADSIAILFFIVLIIISAIALKR 205

The following BLAST results are available for this feature:

BLAST of Cmc10g0267231 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446384.1	8.3e-94	100.00	PREDICTED: casparian strip membrane protein 1 [Cucumis melo] >KAA0034436.1 caspa...	[more]
XP_031742030.1	2.3e-88	94.82	casparian strip membrane protein 1-like isoform X1 [Cucumis sativus]	[more]
XP_038891857.1	9.8e-79	84.97	casparian strip membrane protein 1-like [Benincasa hispida]	[more]
XP_022151205.1	2.6e-63	73.06	casparian strip membrane protein 1 [Momordica charantia]	[more]
XP_022968095.1	1.0e-59	70.83	casparian strip membrane protein 3-like [Cucurbita maxima]	[more]

BLAST of Cmc10g0267231 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0DI33	2.3e-46	55.14	Casparian strip membrane protein 1 OS=Panicum virgatum OX=38727 PE=2 SV=1	[more]
P0DI36	3.3e-45	55.93	Casparian strip membrane protein 3 OS=Brachypodium distachyon OX=15368 GN=Bradi1...	[more]
A2YAZ1	3.3e-45	55.93	Casparian strip membrane protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI...	[more]
Q67X40	3.3e-45	55.93	Casparian strip membrane protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=O...	[more]
B9T4E6	4.3e-45	56.50	Casparian strip membrane protein 5 OS=Ricinus communis OX=3988 GN=RCOM_0299440 P...	[more]

BLAST of Cmc10g0267231 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SX44	4.0e-94	100.00	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G0...	[more]
A0A1S3BFR8	4.0e-94	100.00	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103489141 PE=3 SV=1	[more]
A0A0A0KQP6	5.2e-86	93.78	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G606300 PE=3 SV=1	[more]
A0A6J1DAJ8	1.3e-63	73.06	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111019184 PE=3 SV=1	[more]
A0A6J1HW80	4.9e-60	70.83	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111467431 PE=3 SV=1	[more]

BLAST of Cmc10g0267231 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15290.1	1.2e-37	50.61	Uncharacterised protein family (UPF0497)	[more]
AT1G14160.1	4.4e-37	49.69	Uncharacterised protein family (UPF0497)	[more]
AT5G06200.1	1.3e-36	49.40	Uncharacterised protein family (UPF0497)	[more]
AT3G11550.1	1.9e-35	48.19	Uncharacterised protein family (UPF0497)	[more]
AT2G36100.1	7.1e-35	48.80	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 35..187 e-value: 3.0E-44 score: 148.5
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 28..176 e-value: 2.0E-40 score: 138.0
None	No IPR available	PANTHER	PTHR11615:SF318	CASPARIAN STRIP MEMBRANE PROTEIN 4	coord: 20..190
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 20..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0267231.1	Cmc10g0267231.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane