Cmc10g0263471 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0263471
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr10: 725985 .. 727312 (+)
RNA-Seq ExpressionCmc10g0263471
SyntenyCmc10g0263471
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAACTAACCAACATTTATTAAAAAGCAACGTTAAATTGACATAATTGTGCTTCGGCGGTGGATCACTCTCCTCCGGCCGCCATGACAGAAACATCCCCGGCAACCCTACTTCGGAGCCACTCAACCATATCCCCAAATACAAGCTCCACATTCTCTTTAGGCTCGCCAATCAACTGATGCCACATACCCGGATATATCTTCAGCGTCTTATCTTTACTGGCGGCGCGTCGGTATAGCTCCTCCACGCACGCCGGATCGCAGATCACATCGTCGCCGCCGTGCGATATCAGTAATGGAACCTCCACCTCCTCGAACCTCTCCTGCAACTCTCTGCACACTCTCATAAGTTCCTGCGCGGTCGCCGCTCTAGGACGCGCCACCACGCGTCGGGGACTCGCCGTTGCAAGCTTCCGTTTCCAGTCAACTTTGAAAGAAACATCCGGTATTGATCCGCGCGTGGGAACCACGCGCCAAGTCGGAAGCAAAGCAGCAGCTAATGATAGAAAGTGCTCCAATGGCCATGGTGGTTTGAACTTGGGGCTGATTCCACACATGGCGCCGTTGAGAACAACGCCATTCCACGGTCGCGAGTTCTCGGTTGTCGATTTCTGACGGAGCGTGATGAGAAGGGCAATCGCGCCGCCCAAGGACTCCGAGTAGAGGAAGGAAGGTAAGGACGGCGCGTGACGCTCACGAAATGCATCGAAGAAGGAAATACAGTCTTCAACGACGGGGTTAATGTCAGGTATGTGATACTGAAGGCCTTCGGAGAATCCATGGCCTTGATGATCAATGGCACAAGTGATGAATCCGGCCTTGGTAAAATGGACGGCGGTAAGTTGTATGAACCAGCTAGATTCGCCGGTGAAGCCATGGACGATGGCGATGATTCCGATTGGGTTGATCGGAGGTTGAGGGATCCACCATTGAGTGAATAGTTTAAGGCCCCTGGAATTGGTGATGAATTCGGAGCCGTGAGTCACAGAATGACGAGCATAGAACTCATCGGCGGTGAGAGAGCCGAAGGGGCTCCGCTCGTCGGCGTCTTCGACCGGGTGAACCATTTGGCGGTCGGAGATTTTCAGTTCACAATGAAAGGTTGCGTTGATGTAGGAGGGAAAATTAGGAATGGGGAGTGAAAGTAATGAGATATTGGGTAGTTATTGAGGATATGGGAGGTGGTTGGGGATTCTTTTAATTGTTTGCGTTTTGGTGTTCTACTTCTGCCTAAGAACACTATCCGCATTTAATATTACTTTACTTTCAATAAATCATACCAATAATTTTCATGTAAAAAAAAATTACTGAATGTATTACCCAAATTTAT

mRNA sequence

GAAACTAACCAACATTTATTAAAAAGCAACGTTAAATTGACATAATTGTGCTTCGGCGGTGGATCACTCTCCTCCGGCCGCCATGACAGAAACATCCCCGGCAACCCTACTTCGGAGCCACTCAACCATATCCCCAAATACAAGCTCCACATTCTCTTTAGGCTCGCCAATCAACTGATGCCACATACCCGGATATATCTTCAGCGTCTTATCTTTACTGGCGGCGCGTCGGTATAGCTCCTCCACGCACGCCGGATCGCAGATCACATCGTCGCCGCCGTGCGATATCAGTAATGGAACCTCCACCTCCTCGAACCTCTCCTGCAACTCTCTGCACACTCTCATAAGTTCCTGCGCGGTCGCCGCTCTAGGACGCGCCACCACGCGTCGGGGACTCGCCGTTGCAAGCTTCCGTTTCCAGTCAACTTTGAAAGAAACATCCGGTATTGATCCGCGCGTGGGAACCACGCGCCAAGTCGGAAGCAAAGCAGCAGCTAATGATAGAAAGTGCTCCAATGGCCATGGTGGTTTGAACTTGGGGCTGATTCCACACATGGCGCCGTTGAGAACAACGCCATTCCACGGTCGCGAGTTCTCGGTTGTCGATTTCTGACGGAGCGTGATGAGAAGGGCAATCGCGCCGCCCAAGGACTCCGAGTAGAGGAAGGAAGGTAAGGACGGCGCGTGACGCTCACGAAATGCATCGAAGAAGGAAATACAGTCTTCAACGACGGGGTTAATGTCAGGTATGTGATACTGAAGGCCTTCGGAGAATCCATGGCCTTGATGATCAATGGCACAAGTGATGAATCCGGCCTTGGTAAAATGGACGGCGGTAAGTTGTATGAACCAGCTAGATTCGCCGGTGAAGCCATGGACGATGGCGATGATTCCGATTGGGTTGATCGGAGGTTGAGGGATCCACCATTGAGTGAATAGTTTAAGGCCCCTGGAATTGGTGATGAATTCGGAGCCGTGAGTCACAGAATGACGAGCATAGAACTCATCGGCGGTGAGAGAGCCGAAGGGGCTCCGCTCGTCGGCGTCTTCGACCGGGTGAACCATTTGGCGGTCGGAGATTTTCAGTTCACAATGAAAGGTTGCGTTGATGTAGGAGGGAAAATTAGGAATGGGGAGTGAAAGTAATGAGATATTGGGTAGTTATTGAGGATATGGGAGGTGGTTGGGGATTCTTTTAATTGTTTGCGTTTTGGTGTTCTACTTCTGCCTAAGAACACTATCCGCATTTAATATTACTTTACTTTCAATAAATCATACCAATAATTTTCATGTAAAAAAAAATTACTGAATGTATTACCCAAATTTAT

Coding sequence (CDS)

ATGGCCTTGATGATCAATGGCACAAGTGATGAATCCGGCCTTGGTAAAATGGACGGCGGTAAGTTGTATGAACCAGCTAGATTCGCCGGTGAAGCCATGGACGATGGCGATGATTCCGATTGGGTTGATCGGAGGTTGAGGGATCCACCATTGAGTGAATAG

Protein sequence

MALMINGTSDESGLGKMDGGKLYEPARFAGEAMDDGDDSDWVDRRLRDPPLSE
Homology
[Close]
BLAST of Cmc10g0263471 vs. NCBI nr
Match: KAB2611646.1 (hypothetical protein D8674_019678 [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 56.6 bits (135), Expect = 7.5e-05
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0 

Query: 1   MALMINGTSDESGLGKMDGGKLYEPARFAGEAMDDGDDSDWVDRRLRDPPLSE 54
           M L+++G   E+GLG+MDGG+L EP   AG A+DDG+  D + RR R P L E
Sbjct: 71  MVLVVDGADGEAGLGEMDGGELDEPTGLAGVAVDDGEGPDDLSRRQRGPSLGE 123

[Close]
BLAST of Cmc10g0263471 vs. NCBI nr
Match: RID73681.1 (hypothetical protein BRARA_B00815 [Brassica rapa])

HSP 1 Score: 55.5 bits (132), Expect = 1.7e-04
Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 0 

Query: 3   LMINGTSDESGLGKMDGGKLYEPARFAGEAMDDGDDSDWVDRRLRDPPLSE 54
           L+++G  DE+G  + DG +L EPA FAGEA+DDGDD+D    R   PPL E
Sbjct: 241 LVVDGAGDEAGFSEEDGRELEEPAGFAGEAVDDGDDADGGSWREWGPPLGE 291

[Close]
BLAST of Cmc10g0263471 vs. ExPASy TrEMBL
Match: A0A5N5G8G1 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_019678 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.6e-05
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0 

Query: 1   MALMINGTSDESGLGKMDGGKLYEPARFAGEAMDDGDDSDWVDRRLRDPPLSE 54
           M L+++G   E+GLG+MDGG+L EP   AG A+DDG+  D + RR R P L E
Sbjct: 71  MVLVVDGADGEAGLGEMDGGELDEPTGLAGVAVDDGEGPDDLSRRQRGPSLGE 123

[Close]
BLAST of Cmc10g0263471 vs. ExPASy TrEMBL
Match: A0A398A7B6 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRARA_B00815 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 8.1e-05
Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 0 

Query: 3   LMINGTSDESGLGKMDGGKLYEPARFAGEAMDDGDDSDWVDRRLRDPPLSE 54
           L+++G  DE+G  + DG +L EPA FAGEA+DDGDD+D    R   PPL E
Sbjct: 241 LVVDGAGDEAGFSEEDGRELEEPAGFAGEAVDDGDDADGGSWREWGPPLGE 291

The following BLAST results are available for this feature:
BLAST of Cmc10g0263471 vs. NCBI nr
Match NameE-valueIdentityDescription
KAB2611646.17.5e-0550.94hypothetical protein D8674_019678 [Pyrus ussuriensis x Pyrus communis][more]
RID73681.11.7e-0452.94hypothetical protein BRARA_B00815 [Brassica rapa][more]
BLAST of Cmc10g0263471 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc10g0263471 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5N5G8G13.6e-0550.94Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867... [more]
A0A398A7B68.1e-0552.94Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRARA_B00815 PE=4 SV=1[more]
BLAST of Cmc10g0263471 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..53

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0263471.1Cmc10g0263471.1mRNA