Cmc10g0262741 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0262741
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
LocationCMiso1.1chr10: 325902 .. 330514 (+)
RNA-Seq ExpressionCmc10g0262741
SyntenyCmc10g0262741
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTTAAAGAAAATTTTAATTTACTTTGTGTCTGTTTGGTGGAGATATCTAAGGGTGGTGGAGAAATAGAACTGGGAGAAGGAAAGTAGGGATTTGAAGATTGTGAGAGGCAGCGCAGCGATAGCCGAGCGGAGTTGGCGAAGGCAGAGCGAAGAAAAACTCGGAAAAATGGCGTTCACAGTTCGAGGTTTGAAGGTTCCGCCGAACTCCGCGAGTCTTGAAGAAGCCCGGAATCGGGTCTTCGATTTCTTCAGATCAGCATGTAGATCATTGCCAGCAATCATGGACATTTACAACTTGGATGATGTCACTACTGTTTCTCAACTCCGTTCTACCATCGCCTCTGAGATCCGCAAGAATTCTCACGTCACTGACCCTAAGGTCTTCCCGTTCCTTCAATTTACTCTATTTGCTTCTTAATTCTATATGATGTTCGTTTTTCCTTAATGGGTTGAGGAAATTTTCCCTCTGTGTCGATTAGAGACATGAGGAATTTCGAAGCTTACTTTCCGTTCATTTGAAACGAAGCTTTATAGAAATATAAAACAAAGAAAAGAGTTTTAGAGGATTTTGGTGCCCTAGGGATTTAGAGGATTGGTGGAAAATCTATTCTATATGTTTCTTTTTTCTTGGCCTCGTCCTTCTAATTATGGGAGTTGGTTATTAGTTCTTTCAGTGCTATGGTGAATTTGATGGTATGATTCTTCGGACAACCCATCAATTGCTGACTTTTTGGAGAATTTATTTCAAAGGATTTTATTGAAGATAGGCGTGGAAGAACAAGTTTGAAAGAACCTAGGCTTAGAACTCATTTATTTACTTCTTTTGCTACTGCAATTTTACAAAAAGTTCTATTTTTCTCCTAGAGAAGTTCTCTTTTTCGAGGTCTTCAGTTAGAAAGAAACCCAGAGTGTTGAATCGTTATTTTGGCTGAAGATAGAAGAGGTTGGAAAGCATATATTTCTCTTTTGTCTTCACTTCTTGAAAGCCAGGTCCAGAACGAGAGGAAAGAGAATCCCCAAGACAAAAAGCCATCCACGTACTTCATACGTTGCTGCTCTTAAGAAGGAAAATTCCCATATCTTTTCACCCTCTACAGAACTAGCGTATTTATCAACCACACCAAAGGCTCCATCTCCCATATCCATCAACAAATCAGCCCATGCATATCCACATTCCTCCATACATTGCTGCTCCATACTGCTTCGACGACGATTGGTACAACATTATAAGAGCTTTCAACATTCATGAGTAGTGCCTGTATCATCAATCCTTTCAACACTGACAGGGTTGCCTATCTGTGAGGATATTGATCAAGCCAAAACCCTTAGTACAGTAAAGGCTTGGTACAAGGTAGGAAGATATTTGGTAAAATTCTCCCCTTAGAGTGCTGAAAATGCAACGAAAGATCAGGTTGTCCTTAGCTATGGAGGTTGGATCAAAATTAGGAACCTCCCACTTGATTGATGGGATAATGACACGCTAGTTCATTGGAAAATCTTGTGGTGGGTTCCTTGAAATTTCCAAAAAGACATTGAAACGACCAGATCTCTTTGAAGCTTTCAACAAAGGTCGACAGAAATAATAATAAAGGTTTTATTCCAGCTGTAATCGATATTCCTTCTTCTCCATATCACCGATCAAAGTACATATCGACCTCCTTTTTAATTATGAAAACTACCTCTGCCGGAATCTGTTGATCCATCAAAGATGATGCCAACAAGCACATCAAAATTCATGCAAAAAGGTGTCCTTGGCCCATGTCCTGCTTTCGTGGAAAATAGCATCTCGTTTCCACAGCCTCCACATTCCCGAACAAGCTTGCTGCACCCACATTGCCTAGTGTTCAACAACTACTGGAATCCAACTCGGAAATCACCAATTCCAAGTGGTGTAGCCCCACTAGTCTCTGCGCAATCCCTACCCAAAAATACCAAAACACTAAACCCTTCGTTACCTGATCCTTCATGCCCTCTGGCCGCTTTACCTAATCCTAATTCTATTTCAGTTTATTTTACCCATTGCTGACCACCAACCCACCGACCTACTCAATTCTCTTCTCTTGAGATCATTGACTATACTCCTAATTCTGTTCTGACGACCTTTGGATGCTTGATAATCCACTGATGCTGAGTGCTCTGTTTTTTCGAGTCTAAAACAGAGGATTCCTTTTTCGGCTTGACCTTGTGCTTATTGATCTTCTCTTCTTGTGGTCTGTTTGCATCTTCAGAAAGACGCGTTTTCAGCTTGCTCTGTTCTGTATACCACTTTATGTAATCATGCTTTGATTTGAAGCCTTTGTTTCTTGATAATCCACCGATGATGAGTGCTCTGTTTTTTGAGTCCAAAACAGAGGATTCCTTTTTCGGCTTGACCTTGTGCTTATCCATCTTCTCTTCTTGTGGTCTGTTTGCATCTTCAGAAAGACACATTTTCACCTTGCTCTGTTCTGAATACCACTTTATGTAATCATGCTTTGATTTGAAGCTCTTCAACATATTGAGAAACATTTTCCATCCCTCTTTTACCTCACCCAATAGAATATGTAAGAATGATCTTCCTTCTGTTCGGGGTCAAAAGTTGCATCTTAACACCCAATCTTTCTCTAATCTGAATCTTGAGACTTCTGTCATGCCACTGTCTATTCTTCCTTCCAGCAGAGGTGAGACCTTGATAGTGACAGGATTTTATTCGCCTCCATATCTTCAAGATGGAATAAATCATGCTCTTGCCATATGCAGTAGGGAGAGTCAAAACCCTGCGGCTTTCTTACTTTCATTCCTTGCTTTTGCGCCTGTAGAGCATTCTTGTTCGTCATTTGTCTTGTCGTTTCGCTTTCTTGGCTTGTTTGTTTTGGTTCAAATTCTATCATCGTTTCTTTGGGGTGCTCCCTATCCGAACTTTTTATGGTATTGTGTTAGGATGGTCAAGGTGGGTTACGTGTGGGATACTGTGTGACCCAGACATGAGGAATTTTGATAACTTCTTTTTAGTTCTTCTTACTTAATCTCCAGGTGGAGGCTATATTTGTAATTCACCTATTGGTGTTCAGCGTTTTCTCCAAATTTTCCTTTTTTAATAAAATTGTTTCTCTTCCAAAAAAATGAGTGGATGTTAGCTTGTGGTAGGCCGTTATTTTTGCTTGATTATTTTAATTTCCTAAGATGCTGCTCTTCTCACTGTATTGGTGTCGGACTGCGAACGTTAAGATTATTTTTGTTAGTTTCCAACTCTTTTTCTTTTACAGGTGATTGATATGCTTCTTTTCAAGGGAATGGAAGAGCTTGGTAACATTACTGAGCATGCGAAGCAACGGCATCACATCATTGGTCAGTATGTGGTTGGTCGCGAAGGACTTGTGCAAGATTTTGGCGCCAAGGATCAAGGCATGTCCAATTTTCTCAAAAACTTCTACAGAAGTAACTACTTCTGAACTTCATCTTTCCTGGAATTATTCCAGTGGAATATGATATCCATAGTTTTAATTTGTGATCTTGAGTAATAATGAAGGAACTATACCTGTCCTCTAGACCATGACATTATTTGATCGTTTTGTGGGATTGAATTGTTGGTATATTATAACCAAAGCAATCCAAGATCTTTGTTTCTATTTACTCGGTTCGTTAACTATTAAGCCTAAATGTGGTGTCTACTCTATGCTTTGGTTCCAGATGGTGCTTTCCTCGGTTTCGATTGGCTTCATTCATCACTGCCATTTGTATAAGTTCTATACATTATATAACTTGAAAAGGGACTGTGGTCTCTATTTATATATAGAGAGAGAAAAGTAGAACGAAAACTATTATCTTAATTGTGGTGTGTGAAGAATGCACAAAAGCCATTGATTTGATTGGATTAAATATAATTTTTAGGTTTGGATAAGAGCTCTAACTTCATTGTAACGATTGGGGTGTCTAATAGAGCCAATTTAAAGGCACTTTTTACAGTGATTTTGATTTCATTTTCGAAATCACATATTACTATTAATTCAAAATAAATTTTGATTTTGTGAAAATTGTAATTGCAAGTATACGGTTAATATTAAATCAATTTTAAGCCGTAAAAATAGTTTAAAGAGGAATCTAAACATGATAAAAGTAATTTTAATAATTTAATTTTAACAATGATAAAAATAATTTTAATAATTTCAAAATTATGATAAAAGTAATTCTAATAATTTCGAAACTACTCTACAGCATGCACTAAATTGATCAAGCAAGAAACACTCTACAGCATGCACGAAATTGATCAAGCAAGAAACACTCTACAGCATGCACGAAATTGACAAAGCAAGGACTACTCTACAACATGCACTAAATTGACAAAGCAAGGAGAATTCGAGGAGCATATTTTGAGATGATGCACCAGTCTCCCCTCACCCCTAAAGTTCGCAATCTAGTGACTCGCTCCCTCCTCACCCTCTCCCCTATGTGTGTTTTGACTCTTAGGGTTATAATTAATGGAGGAAAGAAAAGAAACTGTATGTTATGCATACCTTAGATTTCAGTAATACGGGGAAAACATGGCAAAAAGGTGTGCAGTAATTTCTCCTGTAGAACCTAGTATGTTTCTCTAGACACTTTTGTAACTATCTTCCTCTGGACATTCTAC

mRNA sequence

TTTTTTTAAAGAAAATTTTAATTTACTTTGTGTCTGTTTGGTGGAGATATCTAAGGGTGGTGGAGAAATAGAACTGGGAGAAGGAAAGTAGGGATTTGAAGATTGTGAGAGGCAGCGCAGCGATAGCCGAGCGGAGTTGGCGAAGGCAGAGCGAAGAAAAACTCGGAAAAATGGCGTTCACAGTTCGAGGTTTGAAGGTTCCGCCGAACTCCGCGAGTCTTGAAGAAGCCCGGAATCGGGTCTTCGATTTCTTCAGATCAGCATGTAGATCATTGCCAGCAATCATGGACATTTACAACTTGGATGATGTCACTACTGTTTCTCAACTCCGTTCTACCATCGCCTCTGAGATCCGCAAGAATTCTCACGTCACTGACCCTAAGGTGATTGATATGCTTCTTTTCAAGGGAATGGAAGAGCTTGGTAACATTACTGAGCATGCGAAGCAACGGCATCACATCATTGGTCAGTATGTGGTTGGTCGCGAAGGACTTGTGCAAGATTTTGGCGCCAAGGATCAAGGCATGTCCAATTTTCTCAAAAACTTCTACAGAAGTAACTACTTCTGAACTTCATCTTTCCTGGAATTATTCCAGTGGAATATGATATCCATAGTTTTAATTTGTGATCTTGAGTAATAATGAAGGAACTATACCTGTCCTCTAGACCATGACATTATTTGATCGTTTTGTGGGATTGAATTGTTGGTATATTATAACCAAAGCAATCCAAGATCTTTGTTTCTATTTACTCGGTTCGTTAACTATTAAGCCTAAATGTGGTGTCTACTCTATGCTTTGGTTCCAGATGGTGCTTTCCTCGGTTTCGATTGGCTTCATTCATCACTGCCATTTGTATAAGTTCTATACATTATATAACTTGAAAAGGGACTGTGGTCTCTATTTATATATAGAGAGAGAAAAGTAGAACGAAAACTATTATCTTAATTGTGGTGTGTGAAGAATGCACAAAAGCCATTGATTTGATTGGATTAAATATAATTTTTAGGTTTGGATAAGAGCTCTAACTTCATTGTAACGATTGGGGTGTCTAATAGAGCCAATTTAAAGGCACTTTTTACAGTGATTTTGATTTCATTTTCGAAATCACATATTACTATTAATTCAAAATAAATTTTGATTTTGTGAAAATTGTAATTGCAAGTATACGGTTAATATTAAATCAATTTTAAGCCGTAAAAATAGTTTAAAGAGGAATCTAAACATGATAAAAGTAATTTTAATAATTTAATTTTAACAATGATAAAAATAATTTTAATAATTTCAAAATTATGATAAAAGTAATTCTAATAATTTCGAAACTACTCTACAGCATGCACTAAATTGATCAAGCAAGAAACACTCTACAGCATGCACGAAATTGATCAAGCAAGAAACACTCTACAGCATGCACGAAATTGACAAAGCAAGGACTACTCTACAACATGCACTAAATTGACAAAGCAAGGAGAATTCGAGGAGCATATTTTGAGATGATGCACCAGTCTCCCCTCACCCCTAAAGTTCGCAATCTAGTGACTCGCTCCCTCCTCACCCTCTCCCCTATGTGTGTTTTGACTCTTAGGGTTATAATTAATGGAGGAAAGAAAAGAAACTGTATGTTATGCATACCTTAGATTTCAGTAATACGGGGAAAACATGGCAAAAAGGTGTGCAGTAATTTCTCCTGTAGAACCTAGTATGTTTCTCTAGACACTTTTGTAACTATCTTCCTCTGGACATTCTAC

Coding sequence (CDS)

ATGGCGTTCACAGTTCGAGGTTTGAAGGTTCCGCCGAACTCCGCGAGTCTTGAAGAAGCCCGGAATCGGGTCTTCGATTTCTTCAGATCAGCATGTAGATCATTGCCAGCAATCATGGACATTTACAACTTGGATGATGTCACTACTGTTTCTCAACTCCGTTCTACCATCGCCTCTGAGATCCGCAAGAATTCTCACGTCACTGACCCTAAGGTGATTGATATGCTTCTTTTCAAGGGAATGGAAGAGCTTGGTAACATTACTGAGCATGCGAAGCAACGGCATCACATCATTGGTCAGTATGTGGTTGGTCGCGAAGGACTTGTGCAAGATTTTGGCGCCAAGGATCAAGGCATGTCCAATTTTCTCAAAAACTTCTACAGAAGTAACTACTTCTGA

Protein sequence

MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF
Homology
[Close]
BLAST of Cmc10g0262741 vs. NCBI nr
Match: XP_008446979.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucumis melo])

HSP 1 Score: 267.7 bits (683), Expect = 5.3e-68
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60
           MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60

Query: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGMS 120
           IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGMS
Sbjct: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGMS 120

Query: 121 NFLKNFYRSNYF 133
           NFLKNFYRSNYF
Sbjct: 121 NFLKNFYRSNYF 132

[Close]
BLAST of Cmc10g0262741 vs. NCBI nr
Match: XP_038892169.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Benincasa hispida])

HSP 1 Score: 262.7 bits (670), Expect = 1.7e-66
Identity = 129/132 (97.73%), Postives = 131/132 (99.24%), Query Frame = 0 

Query: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60
           MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60

Query: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGMS 120
           IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQD GAKDQG+S
Sbjct: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDLGAKDQGIS 120

Query: 121 NFLKNFYRSNYF 133
           NFLKNFY+SNYF
Sbjct: 121 NFLKNFYKSNYF 132

[Close]
BLAST of Cmc10g0262741 vs. NCBI nr
Match: XP_023552714.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 126/132 (95.45%), Postives = 131/132 (99.24%), Query Frame = 0 

Query: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60
           MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTT+SQ+RSTIASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTISQIRSTIASE 60

Query: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGMS 120
           IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQD G+KDQG+S
Sbjct: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDVGSKDQGIS 120

Query: 121 NFLKNFYRSNYF 133
           NFLKNFY+SNYF
Sbjct: 121 NFLKNFYKSNYF 132

[Close]
BLAST of Cmc10g0262741 vs. NCBI nr
Match: XP_004142382.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucumis sativus])

HSP 1 Score: 257.3 bits (656), Expect = 7.2e-65
Identity = 126/132 (95.45%), Postives = 129/132 (97.73%), Query Frame = 0 

Query: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60
           MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLPAIMDIYNLDDV TVSQLRS IASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE 60

Query: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGMS 120
           IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV+GREGLVQDFGAKDQG S
Sbjct: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVLGREGLVQDFGAKDQGRS 120

Query: 121 NFLKNFYRSNYF 133
           NFLKNFY+SNYF
Sbjct: 121 NFLKNFYKSNYF 132

[Close]
BLAST of Cmc10g0262741 vs. NCBI nr
Match: XP_022957489.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita moschata])

HSP 1 Score: 256.9 bits (655), Expect = 9.4e-65
Identity = 125/132 (94.70%), Postives = 130/132 (98.48%), Query Frame = 0 

Query: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60
           MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIM+IYNLDDVTT SQ+RSTIASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASE 60

Query: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGMS 120
           IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQD G+KDQG+S
Sbjct: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDVGSKDQGIS 120

Query: 121 NFLKNFYRSNYF 133
           NFLKNFY+SNYF
Sbjct: 121 NFLKNFYKSNYF 132

[Close]
BLAST of Cmc10g0262741 vs. ExPASy Swiss-Prot
Match: Q9LHI0 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=At3g12260 PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 9.8e-49
Identity = 93/130 (71.54%), Postives = 110/130 (84.62%), Query Frame = 0 

Query: 3   FTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIR 62
           F +R + VPPNSA+L EAR RVFDFFR+ACRS+P IMDIYNL DV   SQLR  I+++IR
Sbjct: 5   FALRKIGVPPNSANLTEARRRVFDFFRAACRSIPTIMDIYNLQDVVAPSQLRYAISAQIR 64

Query: 63  KNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGMSNF 122
            N+H+TDPKVID+L+FKGMEEL +I +HAKQRHHIIGQYVVG EGLVQ+ G KDQG ++F
Sbjct: 65  NNAHITDPKVIDLLIFKGMEELTDIVDHAKQRHHIIGQYVVG-EGLVQNTGNKDQGKTDF 124

Query: 123 LKNFYRSNYF 133
           LKNFY SNYF
Sbjct: 125 LKNFYTSNYF 133

[Close]
BLAST of Cmc10g0262741 vs. ExPASy Swiss-Prot
Match: Q02366 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Bos taurus OX=9913 GN=NDUFA6 PE=1 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 2.6e-09
Identity = 31/88 (35.23%), Postives = 52/88 (59.09%), Query Frame = 0 

Query: 11  PPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDP 70
           P  S  + EA+ RV + +R+  R +P  + ++ LD   +V Q R  +    +KN+H+TDP
Sbjct: 19  PIFSRDMNEAKRRVRELYRAWYREVPNTVHLFQLD--ISVKQGRDKVREMFKKNAHITDP 78

Query: 71  KVIDMLLFKGMEELGNITEHAKQRHHII 99
           +V+D+L+ KG  EL    +  KQR H++
Sbjct: 79  RVVDLLVIKGKMELEETIKVWKQRTHVM 104

[Close]
BLAST of Cmc10g0262741 vs. ExPASy Swiss-Prot
Match: Q9CQZ5 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Mus musculus OX=10090 GN=Ndufa6 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.6e-09
Identity = 34/88 (38.64%), Postives = 50/88 (56.82%), Query Frame = 0 

Query: 11  PPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDP 70
           P  S  L EA+ RV + +R+  R +P  + +  LD   TV Q R  +     KN+HVTDP
Sbjct: 22  PIFSRDLNEAKRRVRELYRAWYREVPNTVHLMQLD--ITVKQGRDKVREMFMKNAHVTDP 81

Query: 71  KVIDMLLFKGMEELGNITEHAKQRHHII 99
           +V+D+L+ KG  EL    +  KQR H++
Sbjct: 82  RVVDLLVIKGKMELQETIKVWKQRTHVM 107

[Close]
BLAST of Cmc10g0262741 vs. ExPASy Swiss-Prot
Match: Q0MQA4 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Gorilla gorilla gorilla OX=9595 GN=NDUFA6 PE=2 SV=3)

HSP 1 Score: 59.7 bits (143), Expect = 2.9e-08
Identity = 32/88 (36.36%), Postives = 49/88 (55.68%), Query Frame = 0 

Query: 11  PPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDP 70
           P  S  + EA+ RV + +R+  R +P  +  + LD   TV   R  +     KN+HVTDP
Sbjct: 19  PIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLD--ITVKMGRDKVREMFMKNAHVTDP 78

Query: 71  KVIDMLLFKGMEELGNITEHAKQRHHII 99
           +V+D+L+ KG  EL    +  KQR H++
Sbjct: 79  RVVDLLVIKGKIELEETIKVWKQRTHVM 104

[Close]
BLAST of Cmc10g0262741 vs. ExPASy Swiss-Prot
Match: P56556 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Homo sapiens OX=9606 GN=NDUFA6 PE=1 SV=4)

HSP 1 Score: 59.7 bits (143), Expect = 2.9e-08
Identity = 32/88 (36.36%), Postives = 49/88 (55.68%), Query Frame = 0 

Query: 11  PPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDP 70
           P  S  + EA+ RV + +R+  R +P  +  + LD   TV   R  +     KN+HVTDP
Sbjct: 19  PIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLD--ITVKMGRDKVREMFMKNAHVTDP 78

Query: 71  KVIDMLLFKGMEELGNITEHAKQRHHII 99
           +V+D+L+ KG  EL    +  KQR H++
Sbjct: 79  RVVDLLVIKGKIELEETIKVWKQRTHVM 104

[Close]
BLAST of Cmc10g0262741 vs. ExPASy TrEMBL
Match: A0A1S3BH79 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103489526 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.6e-68
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60
           MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60

Query: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGMS 120
           IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGMS
Sbjct: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGMS 120

Query: 121 NFLKNFYRSNYF 133
           NFLKNFYRSNYF
Sbjct: 121 NFLKNFYRSNYF 132

[Close]
BLAST of Cmc10g0262741 vs. ExPASy TrEMBL
Match: A0A0A0KRV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G624440 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.5e-65
Identity = 126/132 (95.45%), Postives = 129/132 (97.73%), Query Frame = 0 

Query: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60
           MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLPAIMDIYNLDDV TVSQLRS IASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE 60

Query: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGMS 120
           IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYV+GREGLVQDFGAKDQG S
Sbjct: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVLGREGLVQDFGAKDQGRS 120

Query: 121 NFLKNFYRSNYF 133
           NFLKNFY+SNYF
Sbjct: 121 NFLKNFYKSNYF 132

[Close]
BLAST of Cmc10g0262741 vs. ExPASy TrEMBL
Match: A0A6J1H232 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111458871 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.6e-65
Identity = 125/132 (94.70%), Postives = 130/132 (98.48%), Query Frame = 0 

Query: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60
           MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIM+IYNLDDVTT SQ+RSTIASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTTSQIRSTIASE 60

Query: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGMS 120
           IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQD G+KDQG+S
Sbjct: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDVGSKDQGIS 120

Query: 121 NFLKNFYRSNYF 133
           NFLKNFY+SNYF
Sbjct: 121 NFLKNFYKSNYF 132

[Close]
BLAST of Cmc10g0262741 vs. ExPASy TrEMBL
Match: A0A6J1JDJ2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Cucurbita maxima OX=3661 GN=LOC111483420 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 7.8e-65
Identity = 124/132 (93.94%), Postives = 130/132 (98.48%), Query Frame = 0 

Query: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60
           MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIM+IYNLDDVTT+S +RSTIASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMNIYNLDDVTTISHIRSTIASE 60

Query: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGMS 120
           IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQD G+KDQG+S
Sbjct: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDVGSKDQGIS 120

Query: 121 NFLKNFYRSNYF 133
           NFLKNFY+SNYF
Sbjct: 121 NFLKNFYKSNYF 132

[Close]
BLAST of Cmc10g0262741 vs. ExPASy TrEMBL
Match: A0A6J1CBT6 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Momordica charantia OX=3673 GN=LOC111010212 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.0e-61
Identity = 117/132 (88.64%), Postives = 124/132 (93.94%), Query Frame = 0 

Query: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60
           MAFT R LKVPPNSASLEEARNRVFDFFRSACRSLP IMDIYNLDDV T+SQLRS++AS+
Sbjct: 1   MAFTARALKVPPNSASLEEARNRVFDFFRSACRSLPTIMDIYNLDDVATISQLRSSVASQ 60

Query: 61  IRKNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGMS 120
           IRKNSH+ DPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVG EGLVQD G KDQG+S
Sbjct: 61  IRKNSHINDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGSEGLVQDLGTKDQGIS 120

Query: 121 NFLKNFYRSNYF 133
           NFLKNFY+SNYF
Sbjct: 121 NFLKNFYKSNYF 132

[Close]
BLAST of Cmc10g0262741 vs. TAIR 10
Match: AT3G12260.1 (LYR family of Fe/S cluster biogenesis protein )

HSP 1 Score: 194.1 bits (492), Expect = 7.0e-50
Identity = 93/130 (71.54%), Postives = 110/130 (84.62%), Query Frame = 0 

Query: 3   FTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIR 62
           F +R + VPPNSA+L EAR RVFDFFR+ACRS+P IMDIYNL DV   SQLR  I+++IR
Sbjct: 5   FALRKIGVPPNSANLTEARRRVFDFFRAACRSIPTIMDIYNLQDVVAPSQLRYAISAQIR 64

Query: 63  KNSHVTDPKVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGMSNF 122
            N+H+TDPKVID+L+FKGMEEL +I +HAKQRHHIIGQYVVG EGLVQ+ G KDQG ++F
Sbjct: 65  NNAHITDPKVIDLLIFKGMEELTDIVDHAKQRHHIIGQYVVG-EGLVQNTGNKDQGKTDF 124

Query: 123 LKNFYRSNYF 133
           LKNFY SNYF
Sbjct: 125 LKNFYTSNYF 133

The following BLAST results are available for this feature:
BLAST of Cmc10g0262741 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008446979.15.3e-68100.00PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucumis... [more]
XP_038892169.11.7e-6697.73NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Benincasa hispida][more]
XP_023552714.11.1e-6595.45NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita pepo sub... [more]
XP_004142382.17.2e-6595.45NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucumis sativus][more]
XP_022957489.19.4e-6594.70NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita moschata... [more]
BLAST of Cmc10g0262741 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LHI09.8e-4971.54NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Arabidopsis thal... [more]
Q023662.6e-0935.23NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Bos taurus OX=99... [more]
Q9CQZ52.6e-0938.64NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Mus musculus OX=... [more]
Q0MQA42.9e-0836.36NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Gorilla gorilla ... [more]
P565562.9e-0836.36NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Homo sapiens OX=... [more]
BLAST of Cmc10g0262741 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BH792.6e-68100.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Cucumis melo OX=... [more]
A0A0A0KRV03.5e-6595.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G624440 PE=3 SV=1[more]
A0A6J1H2324.6e-6594.70NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Cucurbita moscha... [more]
A0A6J1JDJ27.8e-6593.94NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Cucurbita maxima... [more]
A0A6J1CBT61.0e-6188.64NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Momordica charan... [more]
BLAST of Cmc10g0262741 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G12260.17.0e-5071.54LYR family of Fe/S cluster biogenesis protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 48..84
e-value: 9.7E-5
score: 22.4
NoneNo IPR availablePANTHERPTHR12964:SF4NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 6-LIKEcoord: 1..132
NoneNo IPR availableCDDcd20266Complex1_LYR_NDUFA6_LYRM6coord: 17..93
e-value: 2.18336E-33
score: 109.96
IPR016488NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6PANTHERPTHR12964NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNITcoord: 1..132

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0262741.1Cmc10g0262741.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006979 response to oxidative stress
cellular_component GO:0005747 mitochondrial respiratory chain complex I