Cmc10g0262101 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0262101
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description30S ribosomal protein S14, chloroplastic
LocationCMiso1.1chr10: 126334 .. 126820 (+)
RNA-Seq ExpressionCmc10g0262101
SyntenyCmc10g0262101
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCGAAAATATCATTTCTTTCGATGGAGAAGGAGATCTTCCTTCTTATATTTCTACATCTAGGATCCGACTTGTATCATTGATACTACTAGGAATTGAATCATTATGGCAAGGAAAAGTTTAATTCAGAGGGAGAAGAAGAGGCAAAAATTGGAACAAAAATATCATTTGATTCGTCGATCCTTAAAACAAGAAATAAGCAAAGTTCCATCGTTGAGTGAGAAATGGGAAATTCATGGAAAGTTACAATCCCCACCGCGTAATAGTGCACCCACACGTCTTCATCGACGTTGTTTTTTAACCGGAAGACCGAGAGCTAACTATCGAGACTTTGGGCTCTCTGGACACATACTTCGTGAAATGGTTCATGCATGCTTGTTGCCTGGGGCAACAAGATCAAGTTGGTAAGGATTCAAATATCTCTTTCTATTAATTTCTATGATTATAGAGGGACCCCTTTACCATTCTGTATAAATGGACTATTCTATT

mRNA sequence

GCGAAAATATCATTTCTTTCGATGGAGAAGGAGATCTTCCTTCTTATATTTCTACATCTAGGATCCGACTTGTATCATTGATACTACTAGGAATTGAATCATTATGGCAAGGAAAAGTTTAATTCAGAGGGAGAAGAAGAGGCAAAAATTGGAACAAAAATATCATTTGATTCGTCGATCCTTAAAACAAGAAATAAGCAAAGTTCCATCGTTGAGTGAGAAATGGGAAATTCATGGAAAGTTACAATCCCCACCGCGTAATAGTGCACCCACACGTCTTCATCGACGTTGTTTTTTAACCGGAAGACCGAGAGCTAACTATCGAGACTTTGGGCTCTCTGGACACATACTTCGTGAAATGGTTCATGCATGCTTGTTGCCTGGGGCAACAAGATCAAGTTGGTAAGGATTCAAATATCTCTTTCTATTAATTTCTATGATTATAGAGGGACCCCTTTACCATTCTGTATAAATGGACTATTCTATT

Coding sequence (CDS)

ATGGCAAGGAAAAGTTTAATTCAGAGGGAGAAGAAGAGGCAAAAATTGGAACAAAAATATCATTTGATTCGTCGATCCTTAAAACAAGAAATAAGCAAAGTTCCATCGTTGAGTGAGAAATGGGAAATTCATGGAAAGTTACAATCCCCACCGCGTAATAGTGCACCCACACGTCTTCATCGACGTTGTTTTTTAACCGGAAGACCGAGAGCTAACTATCGAGACTTTGGGCTCTCTGGACACATACTTCGTGAAATGGTTCATGCATGCTTGTTGCCTGGGGCAACAAGATCAAGTTGGTAA

Protein sequence

MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Homology
[Close]
BLAST of Cmc10g0262101 vs. NCBI nr
Match: YP_004841781.1 (ribosomal protein S14 [Cucumis melo subsp. melo] >YP_009860071.1 ribosomal protein S14 [Cucumis melo subsp. agrestis] >ASY96633.1 ribosomal protein S14 [Cucumis melo var. conomon] >ASY96721.1 ribosomal protein S14 [Cucumis melo var. makuwa] >ASY96808.1 ribosomal protein S14 [Cucumis melo var. momordica] >ASY96895.1 ribosomal protein S14 [Cucumis melo var. dudaim] >ASY96982.1 ribosomal protein S14 [Cucumis melo var. cantalupo] >ASY97156.1 ribosomal protein S14 [Cucumis melo var. inodorus] >ASY97330.1 ribosomal protein S14 [Cucumis melo var. flexuosus] >QJF46381.1 ribosomal protein S14 [Cucumis melo])

HSP 1 Score: 203.4 bits (516), Expect = 9.3e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]
BLAST of Cmc10g0262101 vs. NCBI nr
Match: YP_009317384.1 (ribosomal protein S14 [Coccinia grandis] >YP_009325987.1 ribosomal protein S14 [Citrullus lanatus] >YP_009348029.1 ribosomal protein S14 [Citrullus mucosospermus] >YP_009420792.1 ribosomal protein S14 [Citrullus colocynthis] >YP_009431555.1 ribosomal protein S14 [Citrullus amarus] >YP_009431640.1 ribosomal protein S14 [Citrullus rehmii] >YP_009456144.1 ribosomal protein S14 [Lagenaria siceraria] >YP_009525184.1 ribosomal protein S14 [Hodgsonia macrocarpa] >YP_009751651.1 ribosomal protein S14 [Hodgsonia heteroclita] >YP_009751904.1 ribosomal protein S14 [Cyclanthera pedata] >YP_009752073.1 ribosomal protein S14 [Dendrosicyos socotranus] >YP_009752157.1 ribosomal protein S14 [Linnaeosicyos amara] >YP_009752494.1 ribosomal protein S14 [Trichosanthes tubiflora] >YP_009752579.1 ribosomal protein S14 [Trichosanthes homophylla] >YP_009753087.1 ribosomal protein S14 [Corallocarpus boehmii] >YP_009753172.1 ribosomal protein S14 [Trichosanthes truncata] >YP_009753256.1 ribosomal protein S14 [Nothoalsomitra suberosa] >YP_010131092.1 ribosomal protein S14 [Benincasa hispida] >APW82459.1 ribosomal protein S14 [Citrullus lanatus subsp. vulgaris] >QHB75961.1 ribosomal protein S14 [Cucumis melo subsp. melo] >QIT04048.1 ribosomal protein S14 [Luffa aegyptiaca] >QIT05060.1 ribosomal protein S14 [Trichosanthes kirilowii] >QJD26469.1 ribosomal protein S14 [Trichosanthes kirilowii var. japonica] >QKX48471.1 ribosomal protein S14 [Luffa acutangula] >QZL38679.1 ribosomal protein S14 [Citrullus ecirrhosus])

HSP 1 Score: 201.8 bits (512), Expect = 2.7e-48
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLK+EISKVPSLSEKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]
BLAST of Cmc10g0262101 vs. NCBI nr
Match: YP_009752918.1 (ribosomal protein S14 [Momordica sessilifolia] >QIT05990.1 ribosomal protein S14 [Momordica sessilifolia])

HSP 1 Score: 200.7 bits (509), Expect = 6.1e-48
Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLK+EISKVPSLS+KWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]
BLAST of Cmc10g0262101 vs. NCBI nr
Match: QZL38591.1 (ribosomal protein S14 [Citrullus naudinianus])

HSP 1 Score: 200.7 bits (509), Expect = 6.1e-48
Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLK+EISKVPSL+EKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLNEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]
BLAST of Cmc10g0262101 vs. NCBI nr
Match: YP_009945415.1 (ribosomal protein S14 [Sechium edule] >QIT04131.1 ribosomal protein S14 [Sechium edule] >QOE55945.1 ribosomal protein S14 [Sechium edule])

HSP 1 Score: 200.7 bits (509), Expect = 6.1e-48
Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLK++ISKVPSLSEKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]
BLAST of Cmc10g0262101 vs. ExPASy Swiss-Prot
Match: Q4VZN5 (30S ribosomal protein S14, chloroplastic OS=Cucumis sativus OX=3659 GN=rps14 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.4e-50
Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0 

Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIR+SLK EISKVPSLSEKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRQSLKNEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]
BLAST of Cmc10g0262101 vs. ExPASy Swiss-Prot
Match: B1NWE8 (30S ribosomal protein S14, chloroplastic OS=Manihot esculenta OX=3983 GN=rps14 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 4.4e-49
Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 0 

Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHL+RRS K+EISKVPSLS+KWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLMRRSSKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCF TGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFSTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]
BLAST of Cmc10g0262101 vs. ExPASy Swiss-Prot
Match: A6MM34 (30S ribosomal protein S14, chloroplastic OS=Buxus microphylla OX=153571 GN=rps14 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 5.7e-49
Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 0 

Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKR+KLEQKYHLIRRS K+EISKVPSLS+KWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRKKLEQKYHLIRRSSKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCF TGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFSTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]
BLAST of Cmc10g0262101 vs. ExPASy Swiss-Prot
Match: Q3C1I0 (30S ribosomal protein S14, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=rps14 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 9.7e-49
Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 0 

Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYH IRRS K+EISKVPSLS+KWEI+GKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHSIRRSSKKEISKVPSLSDKWEIYGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]
BLAST of Cmc10g0262101 vs. ExPASy Swiss-Prot
Match: Q33C38 (30S ribosomal protein S14, chloroplastic OS=Nicotiana tomentosiformis OX=4098 GN=rps14 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 9.7e-49
Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 0 

Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYH IRRS K+EISKVPSLS+KWEI+GKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHSIRRSSKKEISKVPSLSDKWEIYGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]
BLAST of Cmc10g0262101 vs. ExPASy TrEMBL
Match: A0A1S4EU02 (30S ribosomal protein S14, chloroplastic OS=Cucumis melo OX=3656 GN=rps14 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 4.5e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]
BLAST of Cmc10g0262101 vs. ExPASy TrEMBL
Match: A0A249RZC3 (30S ribosomal protein S14, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=rps14 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 4.5e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]
BLAST of Cmc10g0262101 vs. ExPASy TrEMBL
Match: A0A286NG28 (30S ribosomal protein S14, chloroplastic OS=Cucumis melo var. flexuosus OX=1120798 GN=rps14 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 4.5e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]
BLAST of Cmc10g0262101 vs. ExPASy TrEMBL
Match: A0A249RY26 (30S ribosomal protein S14, chloroplastic OS=Cucumis melo subsp. agrestis OX=217619 GN=rps14 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 4.5e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]
BLAST of Cmc10g0262101 vs. ExPASy TrEMBL
Match: A0A249RZ23 (30S ribosomal protein S14, chloroplastic OS=Cucumis melo var. dudaim OX=2034236 GN=rps14 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 4.5e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]
BLAST of Cmc10g0262101 vs. TAIR 10
Match: ATCG00330.1 (chloroplast ribosomal protein S14 )

HSP 1 Score: 187.2 bits (474), Expect = 6.5e-48
Identity = 91/100 (91.00%), Postives = 96/100 (96.00%), Query Frame = 0 

Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MA+KSLI REKKRQKLE+KYHLIRRS K+EISK+PSLSEKW+IHGKLQSPPRNSAPTRLH
Sbjct: 1   MAKKSLIYREKKRQKLEKKYHLIRRSSKKEISKIPSLSEKWKIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCF TGRPRANYRDFGLSGHILREMV ACLLPGATRSSW
Sbjct: 61  RRCFSTGRPRANYRDFGLSGHILREMVQACLLPGATRSSW 100

[Close]
BLAST of Cmc10g0262101 vs. TAIR 10
Match: AT2G34520.1 (mitochondrial ribosomal protein S14 )

HSP 1 Score: 44.3 bits (103), Expect = 6.8e-05
Identity = 32/93 (34.41%), Postives = 45/93 (48.39%), Query Frame = 0 

Query: 10  EKKRQKLEQKYHLIRRSLKQEISKVPSLSEKWEIHG--KLQSPPRNSAPTRLHRRCFLTG 69
           + +R+ L  ++ L RR L +   K P L  +       KL   PRNSA  R+  RC  TG
Sbjct: 73  DHRRRLLAARFEL-RRKLYKAFCKDPDLPSEMRDKNRYKLSKLPRNSAFARIRNRCVFTG 132

Query: 70  RPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           R R+    F +S  + R +     L G T+SSW
Sbjct: 133 RSRSVTELFRVSRIVFRGLASKGALMGITKSSW 164

The following BLAST results are available for this feature:
BLAST of Cmc10g0262101 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_004841781.19.3e-49100.00ribosomal protein S14 [Cucumis melo subsp. melo] >YP_009860071.1 ribosomal prote... [more]
YP_009317384.12.7e-4899.00ribosomal protein S14 [Coccinia grandis] >YP_009325987.1 ribosomal protein S14 [... [more]
YP_009752918.16.1e-4898.00ribosomal protein S14 [Momordica sessilifolia] >QIT05990.1 ribosomal protein S14... [more]
QZL38591.16.1e-4898.00ribosomal protein S14 [Citrullus naudinianus][more]
YP_009945415.16.1e-4898.00ribosomal protein S14 [Sechium edule] >QIT04131.1 ribosomal protein S14 [Sechium... [more]
BLAST of Cmc10g0262101 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q4VZN51.4e-5098.0030S ribosomal protein S14, chloroplastic OS=Cucumis sativus OX=3659 GN=rps14 PE=... [more]
B1NWE84.4e-4995.0030S ribosomal protein S14, chloroplastic OS=Manihot esculenta OX=3983 GN=rps14 P... [more]
A6MM345.7e-4995.0030S ribosomal protein S14, chloroplastic OS=Buxus microphylla OX=153571 GN=rps14... [more]
Q3C1I09.7e-4995.0030S ribosomal protein S14, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=rps1... [more]
Q33C389.7e-4995.0030S ribosomal protein S14, chloroplastic OS=Nicotiana tomentosiformis OX=4098 GN... [more]
BLAST of Cmc10g0262101 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4EU024.5e-49100.0030S ribosomal protein S14, chloroplastic OS=Cucumis melo OX=3656 GN=rps14 PE=3 S... [more]
A0A249RZC34.5e-49100.0030S ribosomal protein S14, chloroplastic OS=Cucumis melo var. cantalupensis OX=3... [more]
A0A286NG284.5e-49100.0030S ribosomal protein S14, chloroplastic OS=Cucumis melo var. flexuosus OX=11207... [more]
A0A249RY264.5e-49100.0030S ribosomal protein S14, chloroplastic OS=Cucumis melo subsp. agrestis OX=2176... [more]
A0A249RZ234.5e-49100.0030S ribosomal protein S14, chloroplastic OS=Cucumis melo var. dudaim OX=2034236 ... [more]
BLAST of Cmc10g0262101 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00330.16.5e-4891.00chloroplast ribosomal protein S14 [more]
AT2G34520.16.8e-0534.41mitochondrial ribosomal protein S14 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.1480coord: 1..90
e-value: 1.3E-33
score: 117.1
NoneNo IPR availablePANTHERPTHR19836:SF1928S RIBOSOMAL PROTEIN S14, MITOCHONDRIALcoord: 3..100
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 2..100
IPR001209Ribosomal protein S14PFAMPF00253Ribosomal_S14coord: 46..99
e-value: 1.9E-20
score: 72.3
IPR001209Ribosomal protein S14PANTHERPTHR1983630S RIBOSOMAL PROTEIN S14coord: 3..100
IPR018271Ribosomal protein S14, conserved sitePROSITEPS00527RIBOSOMAL_S14coord: 61..84
IPR023036Ribosomal protein S14, bacterial/plastidHAMAPMF_00537Ribosomal_S14_1coord: 1..100
score: 25.138023

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0262101.1Cmc10g0262101.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome