Cmc10g0261691 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0261691
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	30S ribosomal protein S8, chloroplastic
Location	CMiso1.1chr10: 83221 .. 83806 (+)
RNA-Seq Expression	Cmc10g0261691
Synteny	Cmc10g0261691

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAAAGAATGTTGATTAGATCAAAAATTTAAGTAACCAATAATTTTCGTTTATCATGGGTAAGGACACTATTGCTAACATAATAACCTCTATTCGCAATGCTGACATGAATAGAAAAGGAATGGTTCGAATACCATCTACTAACATCACCGAAAACATTGTTAAAATACTTTTACGAGAAGGTTTTATTGAAAACGTAAGGAAACATCGGGAAAGCAACAAGGATTTTTGGGTTTTAACCCTACGACATAGAAGAAATAGGAAAGGACCATATAAAACGATTTTAAATTTAAAACGGATCAGTCGACCTGGTCTCCGAATATATTCTAACTATCAAAAAATTCCTAGAATTTTAGGCGGAATGGGCATTGTAATTCTGTCTACTTCTCGGGGTATAATGACAGACCGAGAAGCTCGACTACAGGGAATCGGCGGCGAAATTTTGTGTTATATATGGTAATCTTTATGATATTCGAATTATACACAGAACTTCCCTATTTGTAAAAAAAAAAAAAAAGAAAAGAGGTGGGTTTATAGTTTATAATACGACTCCCCCTTGATTAATTGATACTTTGAAGGGTGTTT

mRNA sequence

TAAAAAAGAATGTTGATTAGATCAAAAATTTAAGTAACCAATAATTTTCGTTTATCATGGGTAAGGACACTATTGCTAACATAATAACCTCTATTCGCAATGCTGACATGAATAGAAAAGGAATGGTTCGAATACCATCTACTAACATCACCGAAAACATTGTTAAAATACTTTTACGAGAAGGTTTTATTGAAAACGTAAGGAAACATCGGGAAAGCAACAAGGATTTTTGGGTTTTAACCCTACGACATAGAAGAAATAGGAAAGGACCATATAAAACGATTTTAAATTTAAAACGGATCAGTCGACCTGGTCTCCGAATATATTCTAACTATCAAAAAATTCCTAGAATTTTAGGCGGAATGGGCATTGTAATTCTGTCTACTTCTCGGGGTATAATGACAGACCGAGAAGCTCGACTACAGGGAATCGGCGGCGAAATTTTGTGTTATATATGGTAATCTTTATGATATTCGAATTATACACAGAACTTCCCTATTTGTAAAAAAAAAAAAAAAGAAAAGAGGTGGGTTTATAGTTTATAATACGACTCCCCCTTGATTAATTGATACTTTGAAGGGTGTTT

Coding sequence (CDS)

ATGGGTAAGGACACTATTGCTAACATAATAACCTCTATTCGCAATGCTGACATGAATAGAAAAGGAATGGTTCGAATACCATCTACTAACATCACCGAAAACATTGTTAAAATACTTTTACGAGAAGGTTTTATTGAAAACGTAAGGAAACATCGGGAAAGCAACAAGGATTTTTGGGTTTTAACCCTACGACATAGAAGAAATAGGAAAGGACCATATAAAACGATTTTAAATTTAAAACGGATCAGTCGACCTGGTCTCCGAATATATTCTAACTATCAAAAAATTCCTAGAATTTTAGGCGGAATGGGCATTGTAATTCTGTCTACTTCTCGGGGTATAATGACAGACCGAGAAGCTCGACTACAGGGAATCGGCGGCGAAATTTTGTGTTATATATGGTAA

Protein sequence

MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWVLTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREARLQGIGGEILCYIW

Homology

[Close]

BLAST of Cmc10g0261691 vs. NCBI nr
Match: YP_004841819.1 (ribosomal protein S8 [Cucumis melo subsp. melo] >YP_009317421.1 ribosomal protein S8 [Coccinia grandis] >YP_009860109.1 ribosomal protein S8 [Cucumis melo subsp. agrestis] >ASY96609.1 ribosomal protein S8 [Cucumis melo var. conomon] >ASY96696.1 ribosomal protein S8 [Cucumis melo var. makuwa] >ASY96783.1 ribosomal protein S8 [Cucumis melo var. momordica] >ASY96870.1 ribosomal protein S8 [Cucumis melo var. dudaim] >ASY96957.1 ribosomal protein S8 [Cucumis melo var. cantalupo] >ASY97131.1 ribosomal protein S8 [Cucumis melo var. inodorus] >ASY97305.1 ribosomal protein S8 [Cucumis melo var. flexuosus] >QJF46420.1 ribosomal protein S8 [Cucumis melo])

HSP 1 Score: 270.0 bits (689), Expect = 1.1e-68
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60
           MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV
Sbjct: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60

Query: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120
           LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120

Query: 121 RLQGIGGEILCYIW 135
           RLQGIGGEILCYIW
Sbjct: 121 RLQGIGGEILCYIW 134

[Close]

BLAST of Cmc10g0261691 vs. NCBI nr
Match: YP_009525221.1 (ribosomal protein S8 [Hodgsonia macrocarpa] >YP_009560871.1 ribosomal protein S8 [Trichosanthes kirilowii] >YP_009674426.1 ribosomal protein S8 [Siraitia grosvenorii] >YP_009738237.1 ribosomal protein S8 [Siraitia siamensis] >YP_009751941.1 ribosomal protein S8 [Cyclanthera pedata] >YP_009752362.1 ribosomal protein S8 [Bryonia marmorata] >YP_009752447.1 ribosomal protein S8 [Trichosanthes tricuspidata] >YP_009753293.1 ribosomal protein S8 [Nothoalsomitra suberosa] >YP_009753655.1 ribosomal protein S8 [Trichosanthes wallichiana] >QIT04085.1 ribosomal protein S8 [Luffa aegyptiaca] >QKX48510.1 ribosomal protein S8 [Luffa acutangula] >AXR94584.1 ribosomal protein S8 [Hodgsonia macrocarpa] >AXR94670.1 ribosomal protein S8 [Hodgsonia macrocarpa] >AXR94753.1 ribosomal protein S8 [Hodgsonia macrocarpa])

HSP 1 Score: 268.9 bits (686), Expect = 2.4e-68
Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60
           MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV
Sbjct: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60

Query: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120
           LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQ+IPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQRIPRILGGMGIVILSTSRGIMTDREA 120

Query: 121 RLQGIGGEILCYIW 135
           RLQGIGGEILCYIW
Sbjct: 121 RLQGIGGEILCYIW 134

[Close]

BLAST of Cmc10g0261691 vs. NCBI nr
Match: YP_009004078.1 (ribosomal protein S8 [Cucumis hystrix] >YP_009346517.1 ribosomal protein S8 [Cucumis x hytivus] >YP_247635.1 ribosomal protein S8 [Cucumis sativus] >Q4VZK0.1 RecName: Full=30S ribosomal protein S8, chloroplastic [Cucumis sativus] >ALF03337.1 ribosomal protein S8 [Cucumis sativus var. hardwickii] >AVE15367.1 ribosomal protein S8 [Cucumis sativus var. sativus] >AAZ94685.1 ribosomal protein S8 [Cucumis sativus] >ABI97452.1 ribosomal protein S8 [Cucumis sativus] >ABI98781.1 ribosomal protein S8 [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 2.4e-68
Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60
           MGKDTIANIITSIRNADMNRKGMVRIP+TNITENIVKILLREGFIENVRKHRESNKDFWV
Sbjct: 1   MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWV 60

Query: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120
           LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120

Query: 121 RLQGIGGEILCYIW 135
           RLQGIGGEILCYIW
Sbjct: 121 RLQGIGGEILCYIW 134

[Close]

BLAST of Cmc10g0261691 vs. NCBI nr
Match: YP_009751857.1 (ribosomal protein S8 [Indofevillea khasiana] >QIT04590.1 ribosomal protein S8 [Indofevillea khasiana] >QJS52358.1 ribosomal protein S8 [Indofevillea khasiana])

HSP 1 Score: 268.5 bits (685), Expect = 3.2e-68
Identity = 132/134 (98.51%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60
           MGKDTIANIITSIRNADMNRKGMVRIPSTNITENI+KILLREGFIENVRKHRESNKDFWV
Sbjct: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIIKILLREGFIENVRKHRESNKDFWV 60

Query: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120
           LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQ+IPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQRIPRILGGMGIVILSTSRGIMTDREA 120

Query: 121 RLQGIGGEILCYIW 135
           RLQGIGGEILCYIW
Sbjct: 121 RLQGIGGEILCYIW 134

[Close]

BLAST of Cmc10g0261691 vs. NCBI nr
Match: YP_009326025.1 (ribosomal protein S8 [Citrullus lanatus] >YP_009348067.1 ribosomal protein S8 [Citrullus mucosospermus] >YP_009420830.1 ribosomal protein S8 [Citrullus colocynthis] >YP_009431678.1 ribosomal protein S8 [Citrullus rehmii] >YP_009456181.1 ribosomal protein S8 [Lagenaria siceraria] >YP_010131129.1 ribosomal protein S8 [Benincasa hispida] >APW82923.1 ribosomal protein S8 [Citrullus lanatus subsp. vulgaris] >QNM38566.1 ribosomal protein S8 [Lagenaria siceraria var. microcarpa] >QZL38717.1 ribosomal protein S8 [Citrullus ecirrhosus] >AHM88713.1 ribosomal protein S8 [Lagenaria siceraria] >AHM88772.1 ribosomal protein S8 [Lagenaria siceraria])

HSP 1 Score: 268.5 bits (685), Expect = 3.2e-68
Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60
           MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV
Sbjct: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60

Query: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120
           LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQ+IPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQQIPRILGGMGIVILSTSRGIMTDREA 120

Query: 121 RLQGIGGEILCYIW 135
           RLQGIGGEILCYIW
Sbjct: 121 RLQGIGGEILCYIW 134

[Close]

BLAST of Cmc10g0261691 vs. ExPASy Swiss-Prot
Match: Q4VZK0 (30S ribosomal protein S8, chloroplastic OS=Cucumis sativus OX=3659 GN=rps8 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.2e-71
Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60
           MGKDTIANIITSIRNADMNRKGMVRIP+TNITENIVKILLREGFIENVRKHRESNKDFWV
Sbjct: 1   MGKDTIANIITSIRNADMNRKGMVRIPATNITENIVKILLREGFIENVRKHRESNKDFWV 60

Query: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120
           LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120

Query: 121 RLQGIGGEILCYIW 135
           RLQGIGGEILCYIW
Sbjct: 121 RLQGIGGEILCYIW 134

[Close]

BLAST of Cmc10g0261691 vs. ExPASy Swiss-Prot
Match: Q49KW3 (30S ribosomal protein S8, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rps8 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.4e-63
Identity = 120/134 (89.55%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60
           MG+DTIA+IITSIRNADMNRKG ++I STNITENIVKILLREGFI+NVRKH+E+NK F V
Sbjct: 1   MGRDTIADIITSIRNADMNRKGTIQIASTNITENIVKILLREGFIKNVRKHQENNKYFLV 60

Query: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120
           LTLRHRRNRKGPY+TILNLKRISRPGLRIYSNYQ+IPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61  LTLRHRRNRKGPYRTILNLKRISRPGLRIYSNYQRIPRILGGMGIVILSTSRGIMTDREA 120

Query: 121 RLQGIGGEILCYIW 135
           RL+GIGGEILCYIW
Sbjct: 121 RLEGIGGEILCYIW 134

[Close]

BLAST of Cmc10g0261691 vs. ExPASy Swiss-Prot
Match: A0ZZ70 (30S ribosomal protein S8, chloroplastic OS=Gossypium barbadense OX=3634 GN=rps8 PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.2e-62
Identity = 119/134 (88.81%), Postives = 129/134 (96.27%), Query Frame = 0


Query: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60
           MGKDTIA+IITSIRNADMNRKG ++I STNITENIV+ILLREGFI+NVRKHRE NK F V
Sbjct: 1   MGKDTIADIITSIRNADMNRKGTIQIGSTNITENIVQILLREGFIDNVRKHRERNKYFLV 60

Query: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120
           LTLRHRRNRKGP++TILNL+RISRPGLRIYSNYQ+IPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61  LTLRHRRNRKGPHRTILNLRRISRPGLRIYSNYQQIPRILGGMGIVILSTSRGIMTDREA 120

Query: 121 RLQGIGGEILCYIW 135
           RL+GIGGEILCYIW
Sbjct: 121 RLEGIGGEILCYIW 134

[Close]

BLAST of Cmc10g0261691 vs. ExPASy Swiss-Prot
Match: Q2L942 (30S ribosomal protein S8, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rps8 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 4.6e-62
Identity = 119/134 (88.81%), Postives = 128/134 (95.52%), Query Frame = 0


Query: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60
           MGKDTIA+IITSIRNADMNRKG ++I STNITENIVKILLREGFI+NVRKHRE NK F V
Sbjct: 1   MGKDTIADIITSIRNADMNRKGTIQIGSTNITENIVKILLREGFIDNVRKHRERNKYFLV 60

Query: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120
           LTLRHRRNRKGP++TILNL+RISRPGLRIYSNYQ+IPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61  LTLRHRRNRKGPHRTILNLRRISRPGLRIYSNYQQIPRILGGMGIVILSTSRGIMTDREA 120

Query: 121 RLQGIGGEILCYIW 135
           RL+GIGGEILC IW
Sbjct: 121 RLEGIGGEILCSIW 134

[Close]

BLAST of Cmc10g0261691 vs. ExPASy Swiss-Prot
Match: Q2MI65 (30S ribosomal protein S8, chloroplastic OS=Solanum lycopersicum OX=4081 GN=rps8 PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.0e-61
Identity = 119/134 (88.81%), Postives = 127/134 (94.78%), Query Frame = 0


Query: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60
           MG+DTIA IITSIRNADM+RK +VRI STNITENIV+ILLREGFIENVRKHRE+NK F V
Sbjct: 1   MGRDTIAEIITSIRNADMDRKRVVRIASTNITENIVQILLREGFIENVRKHRENNKYFLV 60

Query: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120
           LTLRHRRNRK PY+ ILNLKRISRPGLRIYSNYQ+IPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61  LTLRHRRNRKRPYRNILNLKRISRPGLRIYSNYQRIPRILGGMGIVILSTSRGIMTDREA 120

Query: 121 RLQGIGGEILCYIW 135
           RL+GIGGEILCYIW
Sbjct: 121 RLEGIGGEILCYIW 134

[Close]

BLAST of Cmc10g0261691 vs. ExPASy TrEMBL
Match: A0A249RZ88 (30S ribosomal protein S8, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=rps8 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.3e-69
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60
           MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV
Sbjct: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60

Query: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120
           LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120

Query: 121 RLQGIGGEILCYIW 135
           RLQGIGGEILCYIW
Sbjct: 121 RLQGIGGEILCYIW 134

[Close]

BLAST of Cmc10g0261691 vs. ExPASy TrEMBL
Match: A0A1S4EU50 (30S ribosomal protein S8, chloroplastic OS=Cucumis melo OX=3656 GN=rps8 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.3e-69
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60
           MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV
Sbjct: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60

Query: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120
           LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120

Query: 121 RLQGIGGEILCYIW 135
           RLQGIGGEILCYIW
Sbjct: 121 RLQGIGGEILCYIW 134

[Close]

BLAST of Cmc10g0261691 vs. ExPASy TrEMBL
Match: A0A2Z2CM14 (30S ribosomal protein S8, chloroplastic OS=Coccinia grandis OX=387127 GN=rps8 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.3e-69
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60
           MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV
Sbjct: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60

Query: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120
           LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120

Query: 121 RLQGIGGEILCYIW 135
           RLQGIGGEILCYIW
Sbjct: 121 RLQGIGGEILCYIW 134

[Close]

BLAST of Cmc10g0261691 vs. ExPASy TrEMBL
Match: A0A286NFR6 (30S ribosomal protein S8, chloroplastic OS=Cucumis melo var. flexuosus OX=1120798 GN=rps8 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.3e-69
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60
           MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV
Sbjct: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60

Query: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120
           LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120

Query: 121 RLQGIGGEILCYIW 135
           RLQGIGGEILCYIW
Sbjct: 121 RLQGIGGEILCYIW 134

[Close]

BLAST of Cmc10g0261691 vs. ExPASy TrEMBL
Match: A0A249RXN0 (30S ribosomal protein S8, chloroplastic OS=Cucumis melo subsp. agrestis OX=217619 GN=rps8 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.3e-69
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60
           MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV
Sbjct: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60

Query: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120
           LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA
Sbjct: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120

Query: 121 RLQGIGGEILCYIW 135
           RLQGIGGEILCYIW
Sbjct: 121 RLQGIGGEILCYIW 134

[Close]

BLAST of Cmc10g0261691 vs. TAIR 10
Match: ATCG00770.1 (ribosomal protein S8 )

HSP 1 Score: 229.2 bits (583), Expect = 2.0e-60
Identity = 116/134 (86.57%), Postives = 126/134 (94.03%), Query Frame = 0


Query: 1   MGKDTIANIITSIRNADMNRKGMVRIPSTNITENIVKILLREGFIENVRKHRESNKDFWV 60
           MGKDTIA+IITSIRNADMNRKG VRI STNITE+IVKILLREGFIENVRKHRE+N+ F +
Sbjct: 1   MGKDTIADIITSIRNADMNRKGTVRIGSTNITESIVKILLREGFIENVRKHRENNQYFLI 60

Query: 61  LTLRHRRNRKGPYKTILNLKRISRPGLRIYSNYQKIPRILGGMGIVILSTSRGIMTDREA 120
           LTLRHRRN+K  YKTILNLKRISRPGLRIYSN Q+IPRILGG+GIVILSTS+GIMTDREA
Sbjct: 61  LTLRHRRNKKESYKTILNLKRISRPGLRIYSNSQRIPRILGGIGIVILSTSQGIMTDREA 120

Query: 121 RLQGIGGEILCYIW 135
           RL+ IGGEILCYIW
Sbjct: 121 RLKRIGGEILCYIW 134

The following BLAST results are available for this feature:

BLAST of Cmc10g0261691 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_004841819.1	1.1e-68	100.00	ribosomal protein S8 [Cucumis melo subsp. melo] >YP_009317421.1 ribosomal protei...	[more]
YP_009525221.1	2.4e-68	99.25	ribosomal protein S8 [Hodgsonia macrocarpa] >YP_009560871.1 ribosomal protein S8...	[more]
YP_009004078.1	2.4e-68	99.25	ribosomal protein S8 [Cucumis hystrix] >YP_009346517.1 ribosomal protein S8 [Cuc...	[more]
YP_009751857.1	3.2e-68	98.51	ribosomal protein S8 [Indofevillea khasiana] >QIT04590.1 ribosomal protein S8 [I...	[more]
YP_009326025.1	3.2e-68	99.25	ribosomal protein S8 [Citrullus lanatus] >YP_009348067.1 ribosomal protein S8 [C...	[more]

BLAST of Cmc10g0261691 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZK0	3.2e-71	99.25	30S ribosomal protein S8, chloroplastic OS=Cucumis sativus OX=3659 GN=rps8 PE=3 ...	[more]
Q49KW3	1.4e-63	89.55	30S ribosomal protein S8, chloroplastic OS=Eucalyptus globulus subsp. globulus O...	[more]
A0ZZ70	1.2e-62	88.81	30S ribosomal protein S8, chloroplastic OS=Gossypium barbadense OX=3634 GN=rps8 ...	[more]
Q2L942	4.6e-62	88.81	30S ribosomal protein S8, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rps8 PE...	[more]
Q2MI65	1.0e-61	88.81	30S ribosomal protein S8, chloroplastic OS=Solanum lycopersicum OX=4081 GN=rps8 ...	[more]

BLAST of Cmc10g0261691 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A249RZ88	5.3e-69	100.00	30S ribosomal protein S8, chloroplastic OS=Cucumis melo var. cantalupensis OX=36...	[more]
A0A1S4EU50	5.3e-69	100.00	30S ribosomal protein S8, chloroplastic OS=Cucumis melo OX=3656 GN=rps8 PE=3 SV=...	[more]
A0A2Z2CM14	5.3e-69	100.00	30S ribosomal protein S8, chloroplastic OS=Coccinia grandis OX=387127 GN=rps8 PE...	[more]
A0A286NFR6	5.3e-69	100.00	30S ribosomal protein S8, chloroplastic OS=Cucumis melo var. flexuosus OX=112079...	[more]
A0A249RXN0	5.3e-69	100.00	30S ribosomal protein S8, chloroplastic OS=Cucumis melo subsp. agrestis OX=21761...	[more]

BLAST of Cmc10g0261691 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00770.1	2.0e-60	86.57	ribosomal protein S8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.1370.30		coord: 1..76 e-value: 4.6E-29 score: 102.1
None	No IPR available	GENE3D	3.30.1490.10		coord: 77..134 e-value: 3.1E-30 score: 105.4
None	No IPR available	PANTHER	PTHR11758:SF4	37S RIBOSOMAL PROTEIN S8, MITOCHONDRIAL	coord: 1..133
IPR000630	Ribosomal protein S8	PFAM	PF00410	Ribosomal_S8	coord: 4..134 e-value: 1.1E-42 score: 145.0
IPR000630	Ribosomal protein S8	PANTHER	PTHR11758	40S RIBOSOMAL PROTEIN S15A	coord: 1..133
IPR000630	Ribosomal protein S8	PROSITE	PS00053	RIBOSOMAL_S8	coord: 104..121
IPR000630	Ribosomal protein S8	HAMAP	MF_01302_B	Ribosomal_S8_B	coord: 1..134 score: 29.697901
IPR035987	Ribosomal protein S8 superfamily	SUPERFAMILY	56047	Ribosomal protein S8	coord: 1..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0261691.1	Cmc10g0261691.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0005840	ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome