Cmc10g0261671 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGGAATATCTTATCGAGGCAATAGTATTTGCTTCGGGAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATCGAGACAAATCGAAGCCGGACGAAGGGCAATGACACGAAATGCACGACGCGGTGGAAAAATATGGGTACGTATATTTCCGGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCCCCGAATATTGGGTAGCTGTTGTTAAACCAGGTAGAATACTTTATGAAATGAGTGGAGTAGCCGAAAATATAGCCAGAAAAGCTATTTCAATAGCGGCATCCAAAATGCCTATACGAACCCAATTCATTACTTCGGGATAGAAATGTAGAATCAAAGGAAAGCGATCTTTGTTTAAGATGAAAAAAAAACAATTGCAGATTTATTTTTTTTTTTTTTGAAAAACAATATTTCTTTTTTTTTTTTTTACTT ATGAAAGGAATATCTTATCGAGGCAATAGTATTTGCTTCGGGAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATCGAGACAAATCGAAGCCGGACGAAGGGCAATGACACGAAATGCACGACGCGGTGGAAAAATATGGGTACGTATATTTCCGGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCCCCGAATATTGGGTAGCTGTTGTTAAACCAGGTAGAATACTTTATGAAATGAGTGGAGTAGCCGAAAATATAGCCAGAAAAGCTATTTCAATAGCGGCATCCAAAATGCCTATACGAACCCAATTCATTACTTCGGGATAGAAATGTAGAATCAAAGGAAAGCGATCTTTGTTTAAGATGAAAAAAAAACAATTGCAGATTTATTTTTTTTTTTTTTGAAAAACAATATTTCTTTTTTTTTTTTTTACTT ATGAAAGGAATATCTTATCGAGGCAATAGTATTTGCTTCGGGAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATCGAGACAAATCGAAGCCGGACGAAGGGCAATGACACGAAATGCACGACGCGGTGGAAAAATATGGGTACGTATATTTCCGGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCCCCGAATATTGGGTAGCTGTTGTTAAACCAGGTAGAATACTTTATGAAATGAGTGGAGTAGCCGAAAATATAGCCAGAAAAGCTATTTCAATAGCGGCATCCAAAATGCCTATACGAACCCAATTCATTACTTCGGGATAG MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENIARKAISIAASKMPIRTQFITSG Homology
BLAST of Cmc10g0261671 vs. NCBI nr
Match: ASY96370.1 (ribosomal protein L16 [Cucumis melo subsp. agrestis] >ASY96630.1 ribosomal protein L16 [Cucumis melo var. conomon] >ASY96718.1 ribosomal protein L16 [Cucumis melo var. makuwa] >ASY96805.1 ribosomal protein L16 [Cucumis melo var. momordica] >ASY96892.1 ribosomal protein L16 [Cucumis melo var. dudaim] >ASY96979.1 ribosomal protein L16 [Cucumis melo var. cantalupo] >ASY97153.1 ribosomal protein L16 [Cucumis melo var. inodorus] >ASY97327.1 ribosomal protein L16 [Cucumis melo var. flexuosus] >ASY97502.1 ribosomal protein L16 [Cucumis sativus var. hardwickii] >QCY72880.1 ribosomal protein L16 [Cucumis hystrix] >QDH07780.1 ribosomal protein L16 [Cucumis sativus] >QRW36592.1 ribosomal protein L16 [Cucumis melo]) HSP 1 Score: 243.8 bits (621), Expect = 7.4e-61 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Cmc10g0261671 vs. NCBI nr
Match: YP_004841821.1 (ribosomal protein L16 [Cucumis melo subsp. melo] >YP_009004080.1 ribosomal protein L16 [Cucumis hystrix] >YP_009860111.1 ribosomal protein L16 [Cucumis melo subsp. agrestis] >YP_247637.1 ribosomal protein L16 [Cucumis sativus] >Q4VZN1.1 RecName: Full=50S ribosomal protein L16, chloroplastic [Cucumis sativus] >ALF03339.1 ribosomal protein L16 [Cucumis sativus var. hardwickii] >AVE15369.1 ribosomal protein L16 [Cucumis sativus var. sativus] >QJF46422.1 ribosomal protein L16 [Cucumis melo] >AAZ94687.1 ribosomal protein L16 [Cucumis sativus] >AEM76930.1 ribosomal protein L16 [Cucumis melo subsp. melo]) HSP 1 Score: 243.8 bits (621), Expect = 7.4e-61 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Cmc10g0261671 vs. NCBI nr
Match: ABI97454.1 (ribosomal protein L16, partial [Cucumis sativus] >ABI98783.1 ribosomal protein L16, partial [Cucumis sativus] >ARQ16116.1 ribosomal protein L16, partial [Cucumis sativus] >ARQ16199.1 ribosomal protein L16, partial [Cucumis sativus] >ARQ16282.1 ribosomal protein L16, partial [Cucumis sativus]) HSP 1 Score: 243.8 bits (621), Expect = 7.4e-61 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Cmc10g0261671 vs. NCBI nr
Match: QHB76001.1 (ribosomal protein L16 [Cucumis melo subsp. melo]) HSP 1 Score: 242.3 bits (617), Expect = 2.2e-60 Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Cmc10g0261671 vs. NCBI nr
Match: YP_009326027.1 (ribosomal protein L16 [Citrullus lanatus] >YP_009348069.1 ribosomal protein L16 [Citrullus mucosospermus] >YP_009420832.1 ribosomal protein L16 [Citrullus colocynthis] >YP_009431680.1 ribosomal protein L16 [Citrullus rehmii] >YP_009447488.1 ribosomal protein L16 [Cucurbita maxima] >YP_009456183.1 ribosomal protein L16 [Lagenaria siceraria] >APW82925.1 ribosomal protein L16 [Citrullus lanatus subsp. vulgaris] >QNM38568.1 ribosomal protein L16 [Lagenaria siceraria var. microcarpa] >APD52518.1 ribosomal protein L16 [Citrullus lanatus] >APW82755.1 ribosomal protein L16 [Citrullus mucosospermus] >APW82840.1 ribosomal protein L16 [Citrullus mucosospermus]) HSP 1 Score: 241.9 bits (616), Expect = 2.8e-60 Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0
BLAST of Cmc10g0261671 vs. ExPASy Swiss-Prot
Match: Q4VZN1 (50S ribosomal protein L16, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl16 PE=3 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 9.7e-64 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Cmc10g0261671 vs. ExPASy Swiss-Prot
Match: Q09ME0 (50S ribosomal protein L16, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl16 PE=3 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 9.1e-62 Identity = 115/119 (96.64%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of Cmc10g0261671 vs. ExPASy Swiss-Prot
Match: Q2L940 (50S ribosomal protein L16, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rpl16 PE=3 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 4.5e-61 Identity = 113/119 (94.96%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of Cmc10g0261671 vs. ExPASy Swiss-Prot
Match: B1NWI7 (50S ribosomal protein L16, chloroplastic OS=Manihot esculenta OX=3983 GN=rpl16 PE=3 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 5.9e-61 Identity = 113/119 (94.96%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of Cmc10g0261671 vs. ExPASy Swiss-Prot
Match: Q0ZIY1 (50S ribosomal protein L16, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl16 PE=3 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 5.9e-61 Identity = 113/119 (94.96%), Postives = 115/119 (96.64%), Query Frame = 0
BLAST of Cmc10g0261671 vs. ExPASy TrEMBL
Match: A0A218KG73 (50S ribosomal protein L16, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=rpl16 PE=3 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 3.6e-61 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Cmc10g0261671 vs. ExPASy TrEMBL
Match: A0A1X9Q1F7 (50S ribosomal protein L16, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 GN=rpl16 PE=3 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 3.6e-61 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Cmc10g0261671 vs. ExPASy TrEMBL
Match: A0A1S4EU42 (50S ribosomal protein L16, chloroplastic OS=Cucumis melo OX=3656 GN=rpl16 PE=3 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 3.6e-61 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Cmc10g0261671 vs. ExPASy TrEMBL
Match: A0A249S030 (50S ribosomal protein L16, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=rpl16 PE=3 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 3.6e-61 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Cmc10g0261671 vs. ExPASy TrEMBL
Match: A0A249RY39 (50S ribosomal protein L16, chloroplastic OS=Cucumis melo subsp. agrestis OX=217619 GN=rpl16 PE=3 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 3.6e-61 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Cmc10g0261671 vs. TAIR 10
Match: ATCG00790.1 (ribosomal protein L16 ) HSP 1 Score: 219.5 bits (558), Expect = 1.4e-57 Identity = 105/118 (88.98%), Postives = 110/118 (93.22%), Query Frame = 0
BLAST of Cmc10g0261671 vs. TAIR 10
Match: AT2G28830.1 (PLANT U-BOX 12 ) HSP 1 Score: 164.1 bits (414), Expect = 7.0e-41 Identity = 82/117 (70.09%), Postives = 97/117 (82.91%), Query Frame = 0
BLAST of Cmc10g0261671 vs. TAIR 10
Match: ATMG00080.1 (ribosomal protein L16 ) HSP 1 Score: 100.5 bits (249), Expect = 9.5e-22 Identity = 53/123 (43.09%), Postives = 74/123 (60.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|