Cmc10g0261601 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0261601
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	50S ribosomal protein L2, chloroplastic
Location	CMiso1.1chr10: 77928 .. 78329 (+)
RNA-Seq Expression	Cmc10g0261601
Synteny	Cmc10g0261601

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATAGATTTTCGACGGAATGAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGGTTTGA

mRNA sequence

ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATAGATTTTCGACGGAATGAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGGTTTGA

Coding sequence (CDS)

ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATAGATTTTCGACGGAATGAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGGTTTGA

Protein sequence

MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV

Homology

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BLAST of Cmc10g0261601 vs. NCBI nr
Match: YP_009715437.1 (ribosomal protein L2 [Colvillea racemosa] >YP_009715457.1 ribosomal protein L2 [Colvillea racemosa] >YP_009715752.1 ribosomal protein L2 [Zenia insignis] >YP_009715772.1 ribosomal protein L2 [Zenia insignis] >QGL08549.1 ribosomal protein L2 [Colvillea racemosa] >QGL08570.1 ribosomal protein L2 [Colvillea racemosa] >QGL08864.1 ribosomal protein L2 [Zenia insignis] >QGL08885.1 ribosomal protein L2 [Zenia insignis])

HSP 1 Score: 276.2 bits (705), Expect = 1.5e-70
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAV 134
           PIKMGNALPLSAV
Sbjct: 121 PIKMGNALPLSAV 133

[Close]

BLAST of Cmc10g0261601 vs. NCBI nr
Match: YP_009346521.1 (ribosomal protein L2 [Cucumis x hytivus] >YP_009477465.1 ribosomal protein L2 [Citrus sinensis] >YP_009477466.1 ribosomal protein L2 [Citrus sinensis] >YP_009570484.1 ribosomal protein L2 [Berberidopsis corallina] >YP_009570505.1 ribosomal protein L2 [Berberidopsis corallina] >YP_009704583.1 ribosomal protein L2 [Spondias mombin] >AGS56876.1 ribosomal protein L2 [Eleusine coracana] >QBC71684.1 ribosomal protein L2 [Berberidopsis beckleri] >QDK99986.1 ribosomal protein L2 [Siraitia grosvenorii] >QGX42563.1 ribosomal protein L2 [Toxicodendron vernicifluum] >QHN77849.1 50S ribosomal protein [Arachis hypogaea] >GAY49528.1 hypothetical protein CUMW_119830 [Citrus unshiu])

HSP 1 Score: 276.2 bits (705), Expect = 1.5e-70
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAV 134
           PIKMGNALPLSAV
Sbjct: 121 PIKMGNALPLSAV 133

[Close]

BLAST of Cmc10g0261601 vs. NCBI nr
Match: TXG46675.1 (hypothetical protein EZV62_027830 [Acer yangbiense])

HSP 1 Score: 275.8 bits (704), Expect = 2.0e-70
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAV 134
           PIKMGNALPLSA+
Sbjct: 121 PIKMGNALPLSAI 133

[Close]

BLAST of Cmc10g0261601 vs. NCBI nr
Match: TQD73878.1 (hypothetical protein C1H46_040580 [Malus baccata])

HSP 1 Score: 275.8 bits (704), Expect = 2.0e-70
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAV 134
           PIKMGNALPLSA+
Sbjct: 121 PIKMGNALPLSAI 133

[Close]

BLAST of Cmc10g0261601 vs. NCBI nr
Match: QCE13749.1 (large subunit ribosomal protein L2 [Vigna unguiculata])

HSP 1 Score: 275.8 bits (704), Expect = 2.0e-70
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAV 134
           PIKMGNALPLSA+
Sbjct: 121 PIKMGNALPLSAI 133

[Close]

BLAST of Cmc10g0261601 vs. ExPASy Swiss-Prot
Match: Q09MB2 (50S ribosomal protein L2, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 2.9e-72
Identity = 130/131 (99.24%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLS 132
           PIKMGNALPL+
Sbjct: 121 PIKMGNALPLT 131

[Close]

BLAST of Cmc10g0261601 vs. ExPASy Swiss-Prot
Match: Q4VZK5 (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 2.9e-72
Identity = 130/131 (99.24%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLS 132
           PIKMGNALPL+
Sbjct: 121 PIKMGNALPLT 131

[Close]

BLAST of Cmc10g0261601 vs. ExPASy Swiss-Prot
Match: A0A398 (50S ribosomal protein L2-B, chloroplastic OS=Coffea arabica OX=13443 GN=rpl2-B PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.1e-71
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNG VDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGTVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRR EKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGA+IGDTIVSGTEV
Sbjct: 61  RKIDFRRTEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGALIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSA 133
           PIKMGNALPLSA
Sbjct: 121 PIKMGNALPLSA 132

[Close]

BLAST of Cmc10g0261601 vs. ExPASy Swiss-Prot
Match: Q0ZIX7 (50S ribosomal protein L2, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 2.4e-71
Identity = 129/131 (98.47%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRN AVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNRAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLS 132
           PIKMGNALPL+
Sbjct: 121 PIKMGNALPLT 131

[Close]

BLAST of Cmc10g0261601 vs. ExPASy Swiss-Prot
Match: Q2PMM3 (50S ribosomal protein L2-B, chloroplastic OS=Glycine max OX=3847 GN=rpl2-B PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 4.1e-71
Identity = 128/131 (97.71%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRN+LIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNHLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEK+IYGRIVTIEYDPNRNAYICLIHYGDGEK+YILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKNIYGRIVTIEYDPNRNAYICLIHYGDGEKKYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLS 132
           PIKMGNALPLS
Sbjct: 121 PIKMGNALPLS 131

[Close]

BLAST of Cmc10g0261601 vs. ExPASy TrEMBL
Match: A0A444YNM0 (50S ribosomal protein OS=Arachis hypogaea OX=3818 GN=Ahy_B06g082475 PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 7.3e-71
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAV 134
           PIKMGNALPLSAV
Sbjct: 121 PIKMGNALPLSAV 133

[Close]

BLAST of Cmc10g0261601 vs. ExPASy TrEMBL
Match: A0A411JNR1 (Ribosomal protein L2 OS=Berberidopsis corallina OX=85172 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 7.3e-71
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAV 134
           PIKMGNALPLSAV
Sbjct: 121 PIKMGNALPLSAV 133

[Close]

BLAST of Cmc10g0261601 vs. ExPASy TrEMBL
Match: A0A2R4LW47 (Ribosomal protein L2 OS=Citrus sinensis OX=2711 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 7.3e-71
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAV 134
           PIKMGNALPLSAV
Sbjct: 121 PIKMGNALPLSAV 133

[Close]

BLAST of Cmc10g0261601 vs. ExPASy TrEMBL
Match: A0A411K339 (Ribosomal protein L2 OS=Berberidopsis beckleri OX=333358 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 7.3e-71
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAV 134
           PIKMGNALPLSAV
Sbjct: 121 PIKMGNALPLSAV 133

[Close]

BLAST of Cmc10g0261601 vs. ExPASy TrEMBL
Match: A0A6B9DEH2 (Ribosomal protein L2 OS=Toxicodendron vernicifluum OX=4013 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 7.3e-71
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLSAV 134
           PIKMGNALPLSAV
Sbjct: 121 PIKMGNALPLSAV 133

[Close]

BLAST of Cmc10g0261601 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 261.5 bits (667), Expect = 3.6e-70
Identity = 126/131 (96.18%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLI GQH CGKGRNARGIITA HRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLICGQHHCGKGRNARGIITARHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRN KDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLS 132
           PIKMGNALPL+
Sbjct: 121 PIKMGNALPLT 131

[Close]

BLAST of Cmc10g0261601 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 261.5 bits (667), Expect = 3.6e-70
Identity = 126/131 (96.18%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLI GQH CGKGRNARGIITA HRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLICGQHHCGKGRNARGIITARHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRN KDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLS 132
           PIKMGNALPL+
Sbjct: 121 PIKMGNALPLT 131

[Close]

BLAST of Cmc10g0261601 vs. TAIR 10
Match: AT2G07715.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 55.1 bits (131), Expect = 5.1e-08
Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 0


Query: 40 GRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDG 98
          GRN+ G IT  HRGGG KRL R+ID +R+   + G + +IEYDPNR++ I  + +  G
Sbjct: 21 GRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSM-GIVESIEYDPNRSSQIAPVRWIKG 77

[Close]

BLAST of Cmc10g0261601 vs. TAIR 10
Match: ATMG00560.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 55.1 bits (131), Expect = 5.1e-08
Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 0


Query: 40 GRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDG 98
          GRN+ G IT  HRGGG KRL R+ID +R+   + G + +IEYDPNR++ I  + +  G
Sbjct: 21 GRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSM-GIVESIEYDPNRSSQIAPVRWIKG 77

The following BLAST results are available for this feature:

BLAST of Cmc10g0261601 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009715437.1	1.5e-70	100.00	ribosomal protein L2 [Colvillea racemosa] >YP_009715457.1 ribosomal protein L2 [...	[more]
YP_009346521.1	1.5e-70	100.00	ribosomal protein L2 [Cucumis x hytivus] >YP_009477465.1 ribosomal protein L2 [C...	[more]
TXG46675.1	2.0e-70	99.25	hypothetical protein EZV62_027830 [Acer yangbiense]	[more]
TQD73878.1	2.0e-70	99.25	hypothetical protein C1H46_040580 [Malus baccata]	[more]
QCE13749.1	2.0e-70	99.25	large subunit ribosomal protein L2 [Vigna unguiculata]	[more]

BLAST of Cmc10g0261601 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q09MB2	2.9e-72	99.24	50S ribosomal protein L2, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl2-A PE=...	[more]
Q4VZK5	2.9e-72	99.24	50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=...	[more]
A0A398	1.1e-71	97.73	50S ribosomal protein L2-B, chloroplastic OS=Coffea arabica OX=13443 GN=rpl2-B P...	[more]
Q0ZIX7	2.4e-71	98.47	50S ribosomal protein L2, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl2-A PE=...	[more]
Q2PMM3	4.1e-71	97.71	50S ribosomal protein L2-B, chloroplastic OS=Glycine max OX=3847 GN=rpl2-B PE=3 ...	[more]

BLAST of Cmc10g0261601 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A444YNM0	7.3e-71	100.00	50S ribosomal protein OS=Arachis hypogaea OX=3818 GN=Ahy_B06g082475 PE=3 SV=1	[more]
A0A411JNR1	7.3e-71	100.00	Ribosomal protein L2 OS=Berberidopsis corallina OX=85172 GN=rpl2 PE=3 SV=1	[more]
A0A2R4LW47	7.3e-71	100.00	Ribosomal protein L2 OS=Citrus sinensis OX=2711 GN=rpl2 PE=3 SV=1	[more]
A0A411K339	7.3e-71	100.00	Ribosomal protein L2 OS=Berberidopsis beckleri OX=333358 GN=rpl2 PE=3 SV=1	[more]
A0A6B9DEH2	7.3e-71	100.00	Ribosomal protein L2 OS=Toxicodendron vernicifluum OX=4013 GN=rpl2 PE=3 SV=1	[more]

BLAST of Cmc10g0261601 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00830.1	3.6e-70	96.18	ribosomal protein L2	[more]
ATCG01310.1	3.6e-70	96.18	ribosomal protein L2	[more]
AT2G07715.1	5.1e-08	48.28	Nucleic acid-binding, OB-fold-like protein	[more]
ATMG00560.1	5.1e-08	48.28	Nucleic acid-binding, OB-fold-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002171	Ribosomal protein L2	SMART	SM01383	Ribosomal_L2_2	coord: 40..116 e-value: 1.6E-35 score: 134.0
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 3..132
IPR022666	Ribosomal Proteins L2, RNA binding domain	PFAM	PF00181	Ribosomal_L2	coord: 40..116 e-value: 2.3E-30 score: 104.4
None	No IPR available	GENE3D	2.40.50.140		coord: 1..112 e-value: 2.5E-40 score: 139.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR13691:SF55	50S RIBOSOMAL PROTEIN L2, CHLOROPLASTIC	coord: 3..132
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 2..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0261601.1	Cmc10g0261601.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016740	transferase activity